BLASTX nr result
ID: Mentha27_contig00011027
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha27_contig00011027 (3687 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 1658 0.0 gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 1597 0.0 ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 1570 0.0 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1570 0.0 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1566 0.0 ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1545 0.0 ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 1521 0.0 ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1504 0.0 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1500 0.0 ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1446 0.0 ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1444 0.0 ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1428 0.0 ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 1420 0.0 ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 1413 0.0 ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1406 0.0 emb|CBI16226.3| unnamed protein product [Vitis vinifera] 1396 0.0 ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 1395 0.0 ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 1387 0.0 ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 1384 0.0 ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 1381 0.0 >gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus] Length = 1394 Score = 1658 bits (4294), Expect = 0.0 Identities = 851/1222 (69%), Positives = 977/1222 (79%), Gaps = 7/1222 (0%) Frame = -1 Query: 3684 GTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDP 3505 GT+QFTK+PY+EDVGPR+IESIQFST S ++ K EV+V + YYDE RKP+ GLLD Sbjct: 5 GTIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDQ 64 Query: 3504 HMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLK 3325 MGP NKS C+TC F +CPGH G+L LALPV+NVG+ TI+ I+KCICK CSR+LL Sbjct: 65 RMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLA 124 Query: 3324 EKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--Q 3151 +KD Q FL++MRNPK E LKK +I K +V KCNS+ G +K+AV+CSRCGY+NGMVK+ + Sbjct: 125 DKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAG-SKRAVKCSRCGYINGMVKKAKE 183 Query: 3150 QLKIIHERKNIANNGLDEFQSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLY 2980 LKI H+R + +N LDE +SAL+HT+ N + STID K Y LL+NM DEDCELLY Sbjct: 184 PLKIQHDRAKVVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENMLDEDCELLY 243 Query: 2979 LNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE--T 2806 L+DRPEKL+VT+ILVPP AIRPSVF SNENDIT RLK IIQ NA + EM++ + Sbjct: 244 LHDRPEKLIVTNILVPPIAIRPSVFSTRA-MSNENDITSRLKQIIQINAAVLQEMSDQSS 302 Query: 2805 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 2626 +SQ +NW+ L+ EVAQYINS+ R S+ N++PLSGF+QRLKGKQGRFRGNLSGKR Sbjct: 303 QSQSLTNNWDSLQVEVAQYINSDVRVPLQYSE-NTKPLSGFVQRLKGKQGRFRGNLSGKR 361 Query: 2625 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 2446 VEFTGRTVISPDPNLKI EVAVPILMA+IL+YPERVSHHNIE+LRQ VRNGP KYPGAKF Sbjct: 362 VEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPGAKF 421 Query: 2445 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 2266 IK PDG EISL + R AD L+YG IV RHL+DGD++LFNRQPSLHRMSIMSHRARIM Sbjct: 422 IKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIM 481 Query: 2265 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2086 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 541 Query: 2085 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 1906 TQDFLTSS+LITRKDTFYDR++FSL+CSY+GDAMD IDLPTPALVKPVELWTGKQLFS+L Sbjct: 542 TQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSIL 601 Query: 1905 LRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIY 1726 LRPHAKMRVY+NLTVAEK+Y KS ETMCPKDGFVYIRNSELISGQLGKATLGNG+KDG+Y Sbjct: 602 LRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKDGLY 661 Query: 1725 SVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHC 1546 SVLLRDY HAAATCMNRLAKLSARWIGNHGFSIGINDVQPG LNKEKKVTID YG C Sbjct: 662 SVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQC 721 Query: 1545 TDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCG 1366 DYI Y SGSL+L PGC++AETLE+ I+ TLNNIRE TANVCM NL+WRNSPLIMSQC Sbjct: 722 IDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQCD 781 Query: 1365 SKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSA 1186 ACVGQQSVGGRRAPNGF+DRTLPHFE+ AKDPDAKGFVQNSFYTGLSA Sbjct: 782 G-----------ACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSA 830 Query: 1185 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGG 1006 TEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YD TVRNAS CIVQFVYGG Sbjct: 831 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDGTVRNASVCIVQFVYGG 890 Query: 1005 DAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVT 826 DAMDP QMEEK+GLPLNFERLFMKAKATCPA++QK L+ +EI + + E I +L +S+ T Sbjct: 891 DAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTAT 950 Query: 825 FEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLEN 646 EG S + +KEG ++ F SL+ FI+KK P+S+L LKL +EHS+ED+ +LE Sbjct: 951 PEG--ESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHSDEDKGYLEK 1008 Query: 645 VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGV 466 +ASNI G+T+ QLMVFL TCISRY+ KK GEPGTQMTLKTFHFAGV Sbjct: 1009 IASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1068 Query: 465 ASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXDV 286 ASMNVTLGVPR TP+I+ L ++ Sbjct: 1069 ASMNVTLGVPRIKEIINAAKKINTPIISTAL----------------------QSDNNEI 1106 Query: 285 AARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRT 106 A++VKGRIE+TLLEQVAKSIKTSQ SRS SI++TLD +I GA LS+ A +VKESIL+T Sbjct: 1107 IAKIVKGRIEKTLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKT 1166 Query: 105 PKMKLQAQHINILDDHKLEVFL 40 +MKL+ Q + +LD KLE+ + Sbjct: 1167 KRMKLKEQQVKVLDHRKLEIVM 1188 >gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea] Length = 1368 Score = 1597 bits (4136), Expect = 0.0 Identities = 817/1228 (66%), Positives = 950/1228 (77%), Gaps = 3/1228 (0%) Frame = -1 Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499 +Q TKQPYIEDVG R+IESI FSTLSG+++ K + V+VY+G YYD +KPV GLLD M Sbjct: 1 LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60 Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319 GPPNK C TC NF CPGH G+L LALPV+NVGY+ IV I+KCICK CSR+LL+EK Sbjct: 61 GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120 Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQLKI 3139 + FLR+MRNP+LE LKK D+ K IV +CNS G NK A +C RCG++NGMVKR K+ Sbjct: 121 EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLA-KCPRCGHINGMVKRAPYKV 179 Query: 3138 IHERKNIANNGLDEFQSALSHTQANV-SLPSTIDAKMVYELLKNMRDEDCELLYLNDRPE 2962 +++R + ++ ++E QSA +A+ + ST+DA V+ LL+NM DEDCELLY++DRPE Sbjct: 180 MYDRGRVIDSQMEECQSAGPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIHDRPE 239 Query: 2961 KLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-QRFLS 2785 KLMVT+ILVPPTAIRPSVFVDGG QSNENDITERLK+II+ANA L ++ ET ++ ++ Sbjct: 240 KLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYKKGVT 299 Query: 2784 NWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRT 2605 +WE L+ EVAQYINS+ RGL +S+PLSGF+QRLKGKQGRFRGNLSGKRVE+TGRT Sbjct: 300 SWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRT 359 Query: 2604 VISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGH 2425 VISPDPNLKITEVAVPILMA+ILTYPERVSH NI +LR+ VR GP +YPGAKFI+ PDG Sbjct: 360 VISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQPDGT 419 Query: 2424 EISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRF 2245 EISL + +RK HAD L+YG IV RHL+DGD+VLFNRQPSLHRMSIM HRARIMPWRTLRF Sbjct: 420 EISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 479 Query: 2244 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 2065 NESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVASTQDFLTS Sbjct: 480 NESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQDFLTS 539 Query: 2064 SFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKM 1885 SFLITRKDTFYDRSAFSL+C+++ D + ++DLP PA+VKPVELWTGKQ+FSVLLRP Sbjct: 540 SFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRPDKDR 599 Query: 1884 RVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDY 1705 +V++NLTVAEK Y+KS ETMCP+DGFV IRNSELISGQLGKATLGNG+KDG+YS+LLRDY Sbjct: 600 KVFVNLTVAEKIYVKSGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSILLRDY 659 Query: 1704 GPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRY 1525 G HAAA CMNRLAKLSARWIGNHGFSIGINDVQPGD LN EKK ID EYG C YI Y Sbjct: 660 GAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIRYIESY 719 Query: 1524 TSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPIN 1345 SG LEL PGC+ AETLE+KI+ TLN IR+ TA VCM NL+WRNSPLIMSQCGSKGSPIN Sbjct: 720 KSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSKGSPIN 779 Query: 1344 ICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHT 1165 ICQM+ACVGQQSVGGRRAPNGF+DRTLPHFE+GAKDPDAKGFVQNSFYTGL TEFFFHT Sbjct: 780 ICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTEFFFHT 839 Query: 1164 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQ 985 MGGREGLVDTAVKTADTGYMSRRLIKALEDLS+ YD+TVRNAS CIVQF YG D +DPAQ Sbjct: 840 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDGLDPAQ 899 Query: 984 MEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPE 805 MEEKTG PLNFERLFMKAKATCP+ Q L ++I I+ IE E Sbjct: 900 MEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIE---------------E 944 Query: 804 SSTLPDAPSKEGCLQAFAGSLKDFIEKKC-PSSNLRLKLTKEEHSEEDRYHLENVASNIS 628 + + D E C + F SL F+ K+ P+ L KL E S +D+ ++++V S+ S Sbjct: 945 NHSRSDISEMEKCSETFEASLLRFLNKRVYPTGMLSEKLNSENISLQDKSYVQSVVSSTS 1004 Query: 627 GITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVT 448 GIT+ QL VFL C +RY KK GEPGTQMTLKTFHFAGVASMNVT Sbjct: 1005 GITQQQLEVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1064 Query: 447 LGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAARLVK 268 LGVPR KTPVIT L + AR+VK Sbjct: 1065 LGVPRIREIIDAAKKIKTPVITTEL----------------------QRKDCGITARIVK 1102 Query: 267 GRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQ 88 GRIE+TLL ++AKS+K S+ +R+ASI++ LD I+ AQL I A +VKESIL TPKMKL+ Sbjct: 1103 GRIEKTLLGEIAKSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAYTVKESILLTPKMKLK 1162 Query: 87 AQHINILDDHKLEVFLNPPDKRSKEVFE 4 Q I +L+ KL V L +RSK FE Sbjct: 1163 EQQIRVLNRQKLTVSLEA--ERSKLEFE 1188 >ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Solanum tuberosum] Length = 1243 Score = 1570 bits (4066), Expect = 0.0 Identities = 813/1235 (65%), Positives = 949/1235 (76%), Gaps = 7/1235 (0%) Frame = -1 Query: 3687 QGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLD 3508 Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I K +EV+VY G YY+ +KP+ GLLD Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64 Query: 3507 PHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILL 3328 P MGPPNK+G CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS ILL Sbjct: 65 PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124 Query: 3327 KEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ 3148 +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A CS+CGY+NGMVK+ Q Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTAT-CSKCGYMNGMVKKLQ 183 Query: 3147 LKIIHERKNIANNGLDEFQSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCELLYL 2977 LKI HE+ N LDE A+S +A+VS+P +D K+VY L KNM DEDCELLYL Sbjct: 184 LKITHEQ---GNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYL 240 Query: 2976 NDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ 2797 +DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L EM+++ Sbjct: 241 SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV 300 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + L+ W L+ EVAQYINS+ RG+ + Q+ RPLSGF QRLKGKQGRFRGNLSGKRVE+ Sbjct: 301 KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGKRVEY 359 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAKFI+ Sbjct: 360 TGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH 419 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR Sbjct: 420 PDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 479 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD Sbjct: 480 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 539 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKDTFY+R++FSL+CSY+GDAMD DLP+PA +KPVELWTGKQLF +LLRP Sbjct: 540 FLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRP 599 Query: 1896 HAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVL 1717 ++KMRVY+NLTV EKSY ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+YSVL Sbjct: 600 YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 659 Query: 1716 LRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDY 1537 LRDY HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+ I Y C D Sbjct: 660 LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDC 719 Query: 1536 IRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKG 1357 I ++ G L + PGCD+A+TLE++++ +LN +R+ +CMK L+WRNSPLIMSQCGSKG Sbjct: 720 ITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKG 779 Query: 1356 SPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEF 1177 SPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF +K P AKGFV +SF+ GLSATEF Sbjct: 780 SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF 839 Query: 1176 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAM 997 FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG D M Sbjct: 840 FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM 899 Query: 996 DPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEG 817 DP+QMEEK G PLNF RLFMK KATCP +K L+ EI EIV E +L +T EG Sbjct: 900 DPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDMTPEG 955 Query: 816 GHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHLE 649 GC +AF SL DF+ K + NLR L L +E++ +DR +LE Sbjct: 956 ---------------GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLE 1000 Query: 648 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 469 +A NISGITK QL VFL TCISRY K+ GEPGTQMTLKTFHFAG Sbjct: 1001 KIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1060 Query: 468 VASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXD 289 VASMNVTLGVPR TP+IT L Sbjct: 1061 VASMNVTLGVPRIKEIINAAKKITTPIITTKL----------------------LSAANL 1098 Query: 288 VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 109 AAR++K RIE+TLL QVAKS+K SR ASI ++LD + I +QL I A +VK+SIL+ Sbjct: 1099 TAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQ 1158 Query: 108 TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 T K+KL+ I +L+ KLEVF P + K FE Sbjct: 1159 TSKIKLKEHQIKVLNPRKLEVF--PQANKDKLHFE 1191 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 1570 bits (4066), Expect = 0.0 Identities = 813/1235 (65%), Positives = 949/1235 (76%), Gaps = 7/1235 (0%) Frame = -1 Query: 3687 QGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLD 3508 Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I K +EV+VY G YY+ +KP+ GLLD Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64 Query: 3507 PHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILL 3328 P MGPPNK+G CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS ILL Sbjct: 65 PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124 Query: 3327 KEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ 3148 +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A CS+CGY+NGMVK+ Q Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTAT-CSKCGYMNGMVKKLQ 183 Query: 3147 LKIIHERKNIANNGLDEFQSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCELLYL 2977 LKI HE+ N LDE A+S +A+VS+P +D K+VY L KNM DEDCELLYL Sbjct: 184 LKITHEQ---GNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYL 240 Query: 2976 NDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ 2797 +DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L EM+++ Sbjct: 241 SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV 300 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + L+ W L+ EVAQYINS+ RG+ + Q+ RPLSGF QRLKGKQGRFRGNLSGKRVE+ Sbjct: 301 KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGKRVEY 359 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAKFI+ Sbjct: 360 TGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH 419 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR Sbjct: 420 PDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 479 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD Sbjct: 480 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 539 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKDTFY+R++FSL+CSY+GDAMD DLP+PA +KPVELWTGKQLF +LLRP Sbjct: 540 FLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRP 599 Query: 1896 HAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVL 1717 ++KMRVY+NLTV EKSY ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+YSVL Sbjct: 600 YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 659 Query: 1716 LRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDY 1537 LRDY HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+ I Y C D Sbjct: 660 LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDC 719 Query: 1536 IRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKG 1357 I ++ G L + PGCD+A+TLE++++ +LN +R+ +CMK L+WRNSPLIMSQCGSKG Sbjct: 720 ITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKG 779 Query: 1356 SPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEF 1177 SPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF +K P AKGFV +SF+ GLSATEF Sbjct: 780 SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF 839 Query: 1176 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAM 997 FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG D M Sbjct: 840 FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM 899 Query: 996 DPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEG 817 DP+QMEEK G PLNF RLFMK KATCP +K L+ EI EIV E +L +T EG Sbjct: 900 DPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDMTPEG 955 Query: 816 GHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHLE 649 GC +AF SL DF+ K + NLR L L +E++ +DR +LE Sbjct: 956 ---------------GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLE 1000 Query: 648 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 469 +A NISGITK QL VFL TCISRY K+ GEPGTQMTLKTFHFAG Sbjct: 1001 KIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1060 Query: 468 VASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXD 289 VASMNVTLGVPR TP+IT L Sbjct: 1061 VASMNVTLGVPRIKEIINAAKKITTPIITTKL----------------------LSAANL 1098 Query: 288 VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 109 AAR++K RIE+TLL QVAKS+K SR ASI ++LD + I +QL I A +VK+SIL+ Sbjct: 1099 TAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQ 1158 Query: 108 TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 T K+KL+ I +L+ KLEVF P + K FE Sbjct: 1159 TSKIKLKEHQIKVLNPRKLEVF--PQANKDKLHFE 1191 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum lycopersicum] Length = 1390 Score = 1566 bits (4056), Expect = 0.0 Identities = 812/1235 (65%), Positives = 948/1235 (76%), Gaps = 7/1235 (0%) Frame = -1 Query: 3687 QGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLD 3508 Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I KL+EV+VY G YY+ +KP+ GLLD Sbjct: 5 QESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNGLLD 64 Query: 3507 PHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILL 3328 P MGPPNKSG CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS ILL Sbjct: 65 PRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124 Query: 3327 KEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ 3148 +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A CS+CGY+NGMVK+ Q Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTAT-CSKCGYMNGMVKKLQ 183 Query: 3147 LKIIHERKNIANNGLDEFQSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCELLYL 2977 LKI HE+ N LDE A+S +A+VS+P ID K+VY L KNM DEDCELLYL Sbjct: 184 LKITHEQ---GNRILDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLYL 240 Query: 2976 NDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ 2797 +DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L EM+++ Sbjct: 241 SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV 300 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + L+ W L+ EVAQYINS+ RG+ Q RPLSGF QRLKGKQGRFRGNLSGKRVE+ Sbjct: 301 KSLNQWIDLQMEVAQYINSDVRGVPLQMQP-PRPLSGFTQRLKGKQGRFRGNLSGKRVEY 359 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAKFI+ Sbjct: 360 TGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH 419 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG+E+SL++ +RK +AD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR Sbjct: 420 PDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 479 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD Sbjct: 480 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 539 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKDTFY+R++FSL+CSY+GDAMD DLP+PA +KPVELWTGKQLF VLLRP Sbjct: 540 FLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRP 599 Query: 1896 HAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVL 1717 ++KMRVY+NLT+ EKSY ETMC DGFVY RNSELISGQLGKATLGNGNKDG+YSVL Sbjct: 600 YSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 659 Query: 1716 LRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDY 1537 LRDY HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+ I Y C D Sbjct: 660 LRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDC 719 Query: 1536 IRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKG 1357 I ++ G L + PGCD+A+TLE++++ +LN +R+ +CMK L+WRNSPLIMSQCGSKG Sbjct: 720 ITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKG 779 Query: 1356 SPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEF 1177 SPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF +K P AKGFV +SF+ GLSATEF Sbjct: 780 SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF 839 Query: 1176 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAM 997 FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG D M Sbjct: 840 FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM 899 Query: 996 DPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEG 817 DP++MEEK G PLNF RLFMK KATCP +K L+ EI EIV E +L +T EG Sbjct: 900 DPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDMTPEG 955 Query: 816 GHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHLE 649 GC +AF SL DF+ K + NLR L L +E++ +DR +LE Sbjct: 956 ---------------GCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLE 1000 Query: 648 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 469 + NISGITK QL VFL TCISRY K+ GEPGTQMTLKTFHFAG Sbjct: 1001 KIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1060 Query: 468 VASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXD 289 VASMNVTLGVPR TP+ITA L Sbjct: 1061 VASMNVTLGVPRIKEIINAAKKITTPIITAKL----------------------LSAGNL 1098 Query: 288 VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 109 AAR++K RIE+TLL QVAKS+K SR ASI ++LD + I +QL I A +VK+SIL+ Sbjct: 1099 TAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQ 1158 Query: 108 TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 T K+KL+ I +L+ KLEVF P + K FE Sbjct: 1159 TSKIKLKEHQIKVLNPRKLEVF--PQANKDKLHFE 1191 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 1545 bits (3999), Expect = 0.0 Identities = 808/1236 (65%), Positives = 936/1236 (75%), Gaps = 11/1236 (0%) Frame = -1 Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499 +QFTK+PYIEDVGPRKIESI+F+ S ++I K +EVQV++G YYD RKP+ GLLDP M Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64 Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319 GP NK+G C TC NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124 Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQL 3145 +D+L++MR+ K+E LKK +++K IV KC +M +KKAV+CSRCGY+NG+VK+ L Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183 Query: 3144 KIIHERKNIANNGLDEFQSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2974 IIH+R IA+ L+E SA+SHT+ A+ S+ ++ V L K M DEDC+LL L Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243 Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 2797 +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L E+ +T S Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + L+ W+ L+ EVAQYINS+ RG+ Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+ Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG SL++ RK AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR Sbjct: 423 PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 483 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++KPVELWTGKQLF+VLLRP Sbjct: 543 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602 Query: 1896 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 1723 HA +RVYLNLTV EK+Y K KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S Sbjct: 603 HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662 Query: 1722 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 1543 VLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG LN +K I+ Y +C Sbjct: 663 VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722 Query: 1542 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 1363 + I++Y G L+L PGC++A+TLE++I+ LN IRE TANVCM+ L+WRNSPLIMSQCGS Sbjct: 723 ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782 Query: 1362 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 1183 KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT Sbjct: 783 KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842 Query: 1182 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 1003 EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+ IVQF+YG D Sbjct: 843 EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902 Query: 1002 AMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTF 823 MDPA+ME K G PLNF RLF+K KATCPA + L+ +I+E V E Sbjct: 903 GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHN-------- 954 Query: 822 EGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEHSEEDRYHL 652 S EGC AF +L F+E +K ++ L L E EE+ Sbjct: 955 -------------TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQ 1001 Query: 651 ENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFA 472 E A NISGIT QL VFL TCISRYQ K+ GEPGTQMTLKTFHFA Sbjct: 1002 EKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFA 1061 Query: 471 GVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXX 292 GVASMNVTLGVPR TP+ITA L Sbjct: 1062 GVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVK-------------------- 1101 Query: 291 DVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESIL 112 AR+VKGRIERT L QVAKSIK TSR A I V LD + I +QLSI ++ V+ESIL Sbjct: 1102 --TARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESIL 1159 Query: 111 RTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 R ++KL+ QHI +LD KLEV +P RS FE Sbjct: 1160 RNRRIKLKQQHIKVLDAGKLEV--HPQGDRSTIHFE 1193 >ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao] gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] Length = 1395 Score = 1521 bits (3937), Expect = 0.0 Identities = 796/1242 (64%), Positives = 932/1242 (75%), Gaps = 18/1242 (1%) Frame = -1 Query: 3675 QFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMG 3496 +FTK+PYIEDVGPRKI+SIQFS LS ++I K +EVQVYQ YYD + +P+ GGLLDP MG Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63 Query: 3495 PPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKD 3316 P NKSGKC TC NF +CPGH G+L+LALPV+NVGY+ TI+ I+KCICK CSRI+L EK Sbjct: 64 PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123 Query: 3315 RQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQ--QLK 3142 +D+L+RMR+PK++ LKK DI+K+IV KC++M + KAV+C RCGYVNG VK+ L Sbjct: 124 CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMA--SSKAVKCWRCGYVNGTVKKAVAMLG 181 Query: 3141 IIHERKNIANNGLDEFQSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELLYLN 2974 IIH+R I +N L+EF+SA+SHT+ + + ++ V L K M D DCELLYL+ Sbjct: 182 IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241 Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ- 2797 DRPEKL++T+I VPP IRPSV +DG QSNENDITERLK IIQANA LR E+ ET + Sbjct: 242 DRPEKLIITNIAVPPIPIRPSVIMDGS-QSNENDITERLKRIIQANASLRQELVETNAAF 300 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + L WE+L+ EVAQYINS+ RG+ + Q S+PLSGF+QR+KGK GRFRGNLSGKRVE+ Sbjct: 301 KCLGGWEMLQVEVAQYINSDVRGVPFSMQV-SKPLSGFVQRIKGKHGRFRGNLSGKRVEY 359 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PI MARILTYPERVS+HNIEKLRQ VRNGP KYPGA+ ++ Sbjct: 360 TGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRY 419 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG L+ + RK AD+L++GC+V RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR Sbjct: 420 PDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWR 479 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 480 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 539 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKD FYDR+AFSL+CSY+GD MD IDLPTPAL+KP+ELWTGKQLFSVLLRP Sbjct: 540 FLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRP 599 Query: 1896 HAKMRVYLNLTVAEKSYMK-----------SKETMCPKDGFVYIRNSELISGQLGKATLG 1750 HA +RVYLNL V E++Y K ETMCP DGFVYIRNSELI GQLGKATLG Sbjct: 600 HASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLG 659 Query: 1749 NGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVT 1570 NGNKDG+YSVLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG LN EK +T Sbjct: 660 NGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALT 719 Query: 1569 IDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNS 1390 I +Y C + I+ + G L+ PG D+A+TLE+ ++ LNNIR+ T VCMK L+WRNS Sbjct: 720 ISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNS 779 Query: 1389 PLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQN 1210 PLIMSQCGSKGS INI QMIACVGQQSVGGRRAPNGFIDR+LPHF +G+K P AKGFV N Sbjct: 780 PLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVAN 839 Query: 1209 SFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASAC 1030 SFY+GL+ATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSI YDNTVRNAS C Sbjct: 840 SFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGC 899 Query: 1029 IVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIES 850 IVQF+YG D MDPA ME K+G PLNF+RL MK KATCP ++QK L I +++ E + Sbjct: 900 IVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAK 959 Query: 849 KLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSE 670 H + C +AF SLK F++ + + +KL + Sbjct: 960 ------------HDPAGV---------CSEAFKKSLKGFLKSQTNELDRVMKLV--NNCA 996 Query: 669 EDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTL 490 + LE V ISGI+ QL VF+ TCISRY+SK GEPGTQMTL Sbjct: 997 QKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTL 1056 Query: 489 KTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXX 310 KTFHFAGVASMN+T GVPR TPVITA L Sbjct: 1057 KTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPN-------------- 1102 Query: 309 XXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASS 130 A++VKGRIE+T+L QVAKSIK TSRSAS+++TLD + I A+L I A+ Sbjct: 1103 --------IAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANI 1154 Query: 129 VKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 VKESIL+TPK+KL+ QH+ +LD KLEV PP RS+ FE Sbjct: 1155 VKESILQTPKIKLKEQHVKVLDGRKLEVV--PPADRSQIHFE 1194 >ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Citrus sinensis] Length = 1404 Score = 1504 bits (3895), Expect = 0.0 Identities = 786/1244 (63%), Positives = 920/1244 (73%), Gaps = 18/1244 (1%) Frame = -1 Query: 3681 TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 3502 ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY R P+ GGLLDP Sbjct: 11 SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPR 70 Query: 3501 MGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKE 3322 MGP NKS C TC F+NCPGH G+LTLALPV+NVGY+ TI+ I+KCICK CSR+LL+E Sbjct: 71 MGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEE 130 Query: 3321 KDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ-- 3148 K +D+L++MRNPK+E L+K D++K+IV KC++M KAV+C RCGY+NGMVK+ Sbjct: 131 KLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYINGMVKKAVAV 187 Query: 3147 LKIIHERKNIANNGLDEFQSALSHTQANVSLPST----IDAKMVYELLKNMRDEDCELLY 2980 L IIH+R + + L EF SA++HT+ + + + ++ V L K M D DCE+LY Sbjct: 188 LGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLY 246 Query: 2979 LNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES 2800 L++RPEKL++T+I VPP AIRPSV +DG QSNENDITERLK IIQ NA L+ E+ E S Sbjct: 247 LSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRIIQTNASLQQELVEANS 305 Query: 2799 Q-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRV 2623 + L+ WE L+ EVAQYINS+ RG+ + Q +RPLSGF+QRLKGKQGRFRGNLSGKRV Sbjct: 306 AFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLSGFVQRLKGKQGRFRGNLSGKRV 364 Query: 2622 EFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFI 2443 E+TGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQ ++NGP KYPGA+ I Sbjct: 365 EYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMI 424 Query: 2442 KTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMP 2263 + PDG L + R A +L+ GCIV RHLEDGDVVLFNRQPSLHRMSIM HRARIMP Sbjct: 425 RYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 484 Query: 2262 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 2083 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVAST Sbjct: 485 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 544 Query: 2082 QDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLL 1903 QDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DLPTPA++KPVELWTGKQLFSVL+ Sbjct: 545 QDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLI 604 Query: 1902 RPHAKMRVYLNLTVAEKSYMKSK-----------ETMCPKDGFVYIRNSELISGQLGKAT 1756 RPHA MRVY+NLTV EK+Y ETMCP DGFVY RNSELISGQLGKAT Sbjct: 605 RPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKAT 664 Query: 1755 LGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKK 1576 LGNGNKDG+YSVLLRDYG HA + CMNRLAKLSARWIGNHGFSIGI+DVQP L+ +K Sbjct: 665 LGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKG 724 Query: 1575 VTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWR 1396 I Y C I+ Y G L+L PGCD+A+TLE+ I++ LN IRE CM +L WR Sbjct: 725 KLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWR 784 Query: 1395 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFV 1216 NSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDR+LPHF + AK+P AKGFV Sbjct: 785 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFV 844 Query: 1215 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNAS 1036 NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YDN+VRNA Sbjct: 845 ANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAG 904 Query: 1035 ACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETI 856 CIVQF+YG D MDPA ME K+G PLNF+RL MK KATCP Q++L+ ++ EIV + + Sbjct: 905 GCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQL 964 Query: 855 ESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEH 676 A KE C +AF SL+ F E + + ++K ++ Sbjct: 965 A----------------------AYGKESCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIG 1002 Query: 675 SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 496 ++ LE V SGIT+ QL VF++TC SRY K+ GEPGTQM Sbjct: 1003 WDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQM 1062 Query: 495 TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXX 316 TLKTFHFAGVASMN+T GVPR TP+ITA L Sbjct: 1063 TLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNEN------------ 1110 Query: 315 XXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 136 AAR+VKGRIE+TLL QVAKSIK TSR ASI++ LD + I A L I A Sbjct: 1111 ----------AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINA 1160 Query: 135 SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 VKESI++TPK+KL+ QHI +LD KLE+F PP +SK FE Sbjct: 1161 DIVKESIVQTPKIKLKQQHIKVLDFRKLEIF--PPVDKSKIHFE 1202 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis sativus] Length = 1400 Score = 1500 bits (3883), Expect = 0.0 Identities = 788/1237 (63%), Positives = 920/1237 (74%), Gaps = 21/1237 (1%) Frame = -1 Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493 FTKQPYIEDVGPRKI+S+QF+T SG +I KL+EVQVY+G YYD RKP+ GGLLDP MGP Sbjct: 11 FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70 Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313 NK KC TC ANF +CPGH G++ LALPVFNVGY TI+ I+KCICK CSRILL+EK Sbjct: 71 ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130 Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139 +DFLR+MRNPKLE L+K D++K I+ KC+++ GNK + CSRCGY+NG VK+ L I Sbjct: 131 KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNK-STRCSRCGYLNGSVKKAVSMLGI 189 Query: 3138 IHERKNIANNGLDEFQSALSHTQANVSLPSTIDAKMVYELLKNMRDEDCELLYLNDRPEK 2959 +H R + G+ + +N ++ V L + M DEDCELL+L++RPEK Sbjct: 190 LHYRARSKDAGVVSEDLRAPYNVSN----DILNPFRVLCLFQRMSDEDCELLFLSNRPEK 245 Query: 2958 LMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-RFLSN 2782 L++T++LVPP AIRPSV +DG QSNENDITERLK IIQ NA + E++ + SQ + L + Sbjct: 246 LIITNVLVPPIAIRPSVIMDGS-QSNENDITERLKRIIQQNASVSQELSTSNSQAKCLES 304 Query: 2781 WELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTV 2602 W++L+ EVAQ INS+ RG+ + Q S+PL+GF+QRLKGKQGRFRGNL GKRVEFTGRTV Sbjct: 305 WDMLQSEVAQLINSDVRGIPFSMQV-SKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTV 363 Query: 2601 ISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHE 2422 ISPDPNLKITEVAVPI MARILTYPERV+ HNIEKLRQ V NGP KYPGA+ ++ DG Sbjct: 364 ISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSM 423 Query: 2421 ISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 2242 SL+ RK AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HR R+MPWRTLRFN Sbjct: 424 RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFN 483 Query: 2241 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 2062 ESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSS Sbjct: 484 ESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS 543 Query: 2061 FLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMR 1882 FLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPALVKP+ELWTGKQLFSVL+RPHA M+ Sbjct: 544 FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMK 603 Query: 1881 VYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSV 1720 VYLNLTV EKSY K K ETMCP DGFVY RNSELISGQ+GKATLGNGNKDG+YSV Sbjct: 604 VYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSV 663 Query: 1719 LLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTD 1540 LLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPGD L K+K+ TI Y C Sbjct: 664 LLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDK 723 Query: 1539 YIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSK 1360 I + +G+L GCD+A++LESKI++ LN IREATANVCM+NL+WRNSPLIMSQCGSK Sbjct: 724 QINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSK 783 Query: 1359 GSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATE 1180 GSPINI QM+ACVGQQSVGGRRAP+GFIDR+LPHF + AK P AKGFV NSFY+GL+ATE Sbjct: 784 GSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATE 843 Query: 1179 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDA 1000 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD++VRNA CIVQF YG D Sbjct: 844 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDG 903 Query: 999 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFE 820 MDPAQME K+G PLNFERLF+KAKATCP+ K L+ E +ET+E +L K Sbjct: 904 MDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEF----SETVEDRLSKD----- 954 Query: 819 GGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEE---------HS 673 DA + GC AF GSLK F+ K + + L E S Sbjct: 955 ----------DASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSS 1004 Query: 672 EEDRYHLEN-VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 496 + D + N V NI+G+T QL VFL TC+SRY +KK GEPGTQM Sbjct: 1005 DNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQM 1064 Query: 495 TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXX 316 TLKTFHFAGVASMNVTLGVPR TP++TA L Sbjct: 1065 TLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVN------------ 1112 Query: 315 XXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 136 AR+VK RIE+T L Q+AK I+ +SRSA I + LD ++I A+L + A Sbjct: 1113 ----------IARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDA 1162 Query: 135 SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDK 25 + VK++IL TPK+KL+ +HIN+LDD KL V D+ Sbjct: 1163 NVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADR 1199 >ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] gi|557526635|gb|ESR37941.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] Length = 1397 Score = 1446 bits (3742), Expect = 0.0 Identities = 769/1259 (61%), Positives = 901/1259 (71%), Gaps = 33/1259 (2%) Frame = -1 Query: 3681 TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 3502 ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY R P+ GGLLDP Sbjct: 11 SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPR 70 Query: 3501 M---------------GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVI 3367 M GP NKS C TC F+NCPGH G+LTLALPV+NVGY+ TI+ I Sbjct: 71 MEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDI 130 Query: 3366 MKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECS 3187 +KCICK CSR+LL+EK +D+L++MRNPK+E L+K D++K+IV KC++M KAV+C Sbjct: 131 LKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCP 187 Query: 3186 RCGYVNGMVKRQQ--LKIIHERKNIANNGLDEFQSALSHTQANVSLPST----IDAKMVY 3025 RCGY+NGMVK+ L IIH+R + + L EF SA++HT+ + + + ++ V Sbjct: 188 RCGYINGMVKKAVAVLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVL 246 Query: 3024 ELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFII 2845 L K M D DCE+LYL++RPEKL++T+I VPP AIRPSV +DG QSNENDITERLK II Sbjct: 247 FLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRII 305 Query: 2844 QANACLRSEMAETESQ-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLK 2668 Q NA L+ E+ E S + L+ WE L+ EVAQYINS+ RG+ + Q +RPLSGF+QRLK Sbjct: 306 QTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLSGFVQRLK 364 Query: 2667 GKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQ 2488 GKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQ Sbjct: 365 GKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQ 424 Query: 2487 YVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPS 2308 ++NGP KYPGA+ I+ PDG L + R A +L+ GCIV RHLEDGDVVLFNRQPS Sbjct: 425 CIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPS 484 Query: 2307 LHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQN 2128 LHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQN Sbjct: 485 LHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQN 544 Query: 2127 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVK 1948 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DLPTPA++K Sbjct: 545 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILK 604 Query: 1947 PVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMKSK-----------ETMCPKDGFVY 1801 PVELWTGKQLFSVL+RPHA MRVY+NLTV EK+Y ETMCP DGFVY Sbjct: 605 PVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVY 664 Query: 1800 IRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIG 1621 RNSELISGQLGKATLG CMNRLAKLSARWIGNHGFSIG Sbjct: 665 FRNSELISGQLGKATLG----------------------CMNRLAKLSARWIGNHGFSIG 702 Query: 1620 INDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNI 1441 I+DVQP L+ +K I Y C I+ Y G L+L PGCD+A+TLE+ I++ LN I Sbjct: 703 IDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRI 762 Query: 1440 REATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLP 1261 RE CM +L WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDR+LP Sbjct: 763 REDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLP 822 Query: 1260 HFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKAL 1081 HF + AK+P AKGFV NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKAL Sbjct: 823 HFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKAL 882 Query: 1080 EDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQK 901 EDLSI YDN+VRNA CIVQF+YG D MDPA ME K+G PLNF+RL MK KATCP Q+ Sbjct: 883 EDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQR 942 Query: 900 FLTTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKK 721 +L+ ++ EIV + + A KE C +AF SL+ F E + Sbjct: 943 YLSPQQVSEIVEKQLA----------------------AYGKESCSEAFLNSLRKFFEGQ 980 Query: 720 CPSSNLRLKLTKEEHSEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXX 541 + ++K ++ ++ LE V SGIT+ QL VF++TC SRY K+ Sbjct: 981 QDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAI 1040 Query: 540 XXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXX 361 GEPGTQMTLKTFHFAGVASMN+T GVPR TP+ITA L Sbjct: 1041 GAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECND 1100 Query: 360 XXXXXXXXXXXXXXXXXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVT 181 AAR+VKGRIE+TLL QVAKSIK TSR ASI++ Sbjct: 1101 NEN----------------------AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIA 1138 Query: 180 LDKDRIDGAQLSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 LD + I A L I A VKESI++TPK+KL+ QHI +LD KLE+F PP +SK FE Sbjct: 1139 LDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIF--PPVDKSKIHFE 1195 >ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 1394 Score = 1444 bits (3738), Expect = 0.0 Identities = 764/1250 (61%), Positives = 906/1250 (72%), Gaps = 27/1250 (2%) Frame = -1 Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493 +TKQPYIEDVGPR+I+SIQFST+SG+DI K SE QV+ G+YYD +K + GGLLD MG Sbjct: 10 YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69 Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313 PNK G C+TC +FT+CPGH G+L L LPV+NVGY+ TI+ I+KCICK CSR+L+ EK R Sbjct: 70 PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129 Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139 + +L+RMRNP+ E LKKN+++K IV KC+SM + KAV+C RCGY+NGMVK+ + I Sbjct: 130 KSYLKRMRNPRTEPLKKNELMKEIVKKCSSMA--SSKAVKCLRCGYMNGMVKKAGSVVGI 187 Query: 3138 IHERKNIANNGLDEFQSALSHTQ---ANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 2971 IH+R + + L+E +SA+ HT+ A + L + I + V L + M +EDCELLYL Sbjct: 188 IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247 Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-- 2797 RPEKL++T+I VPP +IRPSVF +G QSNENDITERLK IIQ NA LR E+ E Sbjct: 248 RPEKLIITTIAVPPISIRPSVFTEGS-QSNENDITERLKQIIQFNAKLRLELLEGRRTGI 306 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 ++L W+ L+ V YINS+ R RPLSGF+QRL GKQGRFR NL+GKRVEF Sbjct: 307 KYLIGWDELQAVVTLYINSDVR--IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEF 364 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ V NG KYPGA+ + Sbjct: 365 TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTY 424 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG L RK A++L+ GCIVHRHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR Sbjct: 425 PDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 484 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEILVASTQD Sbjct: 485 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQD 544 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKDTFYDR+AFSLMCSY+ D MD +DLPTP+++KP+ELWTGKQLFSVLLRP Sbjct: 545 FLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRP 604 Query: 1896 HAKMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNK 1738 HA +RVY+NL + EK+Y K +ETMCP DG+VY RNSELISGQLGKATLGNGNK Sbjct: 605 HANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNK 664 Query: 1737 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 1558 DG+YS+LLRDY +AAATCMNRLAKLSARWIGNHGFSIGI+DVQPG L EK TI Sbjct: 665 DGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNG 724 Query: 1557 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 1378 Y HC I Y G L L GCD+ +TLE++I+E LN +RE +VCMK L+WRNSPLIM Sbjct: 725 YRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIM 784 Query: 1377 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 1198 SQCGSKGSPINI QMIACVGQQSVGG RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 785 SQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYS 844 Query: 1197 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 1018 GLSATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + YDNTV++A IVQF Sbjct: 845 GLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQF 904 Query: 1017 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFK 838 +YG D +DPA ME K G+PLNF+RLFMK KATC A + ++L+ +I IV +S L K Sbjct: 905 LYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIV----QSLLLK 960 Query: 837 SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKL---TKEEHSEE 667 + T +G C ++F SL F+ + +KL + E+ E Sbjct: 961 HNGTLDG---------------ICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFEN 1005 Query: 666 DR---------YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXG 514 + + E +A +SGIT+ QL VFL+TC+ RY K+ G Sbjct: 1006 IKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIG 1065 Query: 513 EPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXX 334 EPGTQMTLKTFHFAGVASMN+T GVPR TP+IT L Sbjct: 1066 EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVN------ 1119 Query: 333 XXXXXXXXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGA 154 AAR++KGRI++T+L QVAKSIK TSRSAS+ VTLD I A Sbjct: 1120 ----------------AARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREA 1163 Query: 153 QLSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 QLS+ A+ V+E IL TPK+K + Q IN+L+D KLEVF P R+K FE Sbjct: 1164 QLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVF--PGGDRNKLHFE 1211 >ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine max] Length = 1391 Score = 1428 bits (3696), Expect = 0.0 Identities = 760/1240 (61%), Positives = 900/1240 (72%), Gaps = 17/1240 (1%) Frame = -1 Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493 FTK+P++ED GPRKI++++FSTLS ++I K++EVQV++G YYD +KP+ GGLLDP MGP Sbjct: 11 FTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70 Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313 NKS C TC NF +CPGH G+L LALPVFNVGY+ TIV I+KCICK C+RILL E R Sbjct: 71 ANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTR 130 Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139 + L++MR+ K L K D +K V K S K V C RCGY+NG VK+ L I Sbjct: 131 KKHLKKMRSSKKSELDKIDFVKVRVIKDCS------KVVNCPRCGYINGSVKKLPASLTI 184 Query: 3138 IHERKNIANNGLDEFQSALSH---TQANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 2971 IH+ N ++E SALS ++A ++ + I + V L K M DEDCELLY+ + Sbjct: 185 IHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAE 244 Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-TESQR 2794 RPEKL++T+++VPP AIRPSV +D SNENDITERLK IIQANA LR E+ E T S + Sbjct: 245 RPEKLIMTNVVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESTFSSK 303 Query: 2793 FLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFT 2614 FL W++L++EVAQ+INS+ RG+ Q ++ L+GF+QRLKGK GRFRGNLSGKRVE+T Sbjct: 304 FLDGWDILQNEVAQFINSDVRGIPFYMQP-TKQLAGFVQRLKGKHGRFRGNLSGKRVEYT 362 Query: 2613 GRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTP 2434 GRTVISPDPNLKI+EVA+PI MARILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++ Sbjct: 363 GRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRD 422 Query: 2433 DGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRT 2254 GH SL RK AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT Sbjct: 423 GGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 482 Query: 2253 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 2074 LRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNGEILVASTQDF Sbjct: 483 LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDF 542 Query: 2073 LTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPH 1894 LTSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA+VKPVELW+GKQLFS++LRPH Sbjct: 543 LTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPH 602 Query: 1893 AKMRVYLNLTVAEKSYMKSK---------ETMCPKDGFVYIRNSELISGQLGKATLGNGN 1741 A MRVY+NLTV E++Y + K +T+CP DGFVY RNSELISGQ+GK TLGNGN Sbjct: 603 ANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGNGN 662 Query: 1740 KDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDM 1561 KDG++SVLLRDY HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L +K TI Sbjct: 663 KDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISE 722 Query: 1560 EYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLI 1381 Y C +I + G LEL GCD+A+TLE++I+ LN +R+ VCM+ L+WRNSPLI Sbjct: 723 GYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSPLI 782 Query: 1380 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFY 1201 MSQCGSKGS INI QM+ACVGQQSVGGRR PNGFIDR+LPHF + +K P AKGFV NSFY Sbjct: 783 MSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFY 842 Query: 1200 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQ 1021 +GLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K+LEDL + YD TVRNA IVQ Sbjct: 843 SGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQ 902 Query: 1020 FVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCP-AMDQKFLTTDEIKEIVTETIESKL 844 F YG D MDPA ME K G PLNFERLF+K+KA CP D + L++ ++ ++V E + Sbjct: 903 FCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSE-- 960 Query: 843 FKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEED 664 F S E G E D F SL+ FI+ KLT+E ++E Sbjct: 961 FDMSRLAEKGVFEVGFSAD----------FVESLQSFIKDNA-------KLTEEGFTDEH 1003 Query: 663 RYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKT 484 +L+ ISGIT+ QL VFL C+SRY SKK GEPGTQMTLKT Sbjct: 1004 SQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKT 1063 Query: 483 FHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXX 304 FHFAGVASMNVTLGVPR TP+ITA+L Sbjct: 1064 FHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNAN---------------- 1107 Query: 303 XXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVK 124 AR+VKGRIE+T L QVAKSIK TSRSAS+++TLD RI A L+I A+ VK Sbjct: 1108 ------TARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVK 1161 Query: 123 ESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 ESILRT K KL+ +HI ILD KLEV D RSK F+ Sbjct: 1162 ESILRTKKTKLKPEHIKILDIKKLEVVPQDVD-RSKIHFQ 1200 >ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris] gi|561005141|gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris] Length = 1392 Score = 1420 bits (3677), Expect = 0.0 Identities = 753/1238 (60%), Positives = 900/1238 (72%), Gaps = 15/1238 (1%) Frame = -1 Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493 FTK+P++ED GPRKI++++FS LS ++I KL EVQV++G YYD +KP+ GGLLDP MGP Sbjct: 11 FTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70 Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313 NKS C TC NF +CPGH G+L LALPVFNVGY+G+IV I+KCICK C+RILL E R Sbjct: 71 ANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDEDTR 130 Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139 + L++MR+ K L K D +K + K S K V C RCGY+NG VK+ L I Sbjct: 131 KKHLKKMRSSKKSELDKMDFVKVRIIKDCS------KVVNCPRCGYINGSVKKLPASLII 184 Query: 3138 IHERKNIANNGLDEFQSALSHTQ-----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2974 +H+ NN ++E +S LS + ANVS ++ V L + M DEDCELLY+ Sbjct: 185 MHDCSKCKNNIVEELESTLSRIKDSKATANVS-NRILNPFQVLSLFRKMLDEDCELLYVA 243 Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE-SQ 2797 +RPEKL++T+I+VPP AIRPSV +D SNENDITERLK IIQANA LR E+ E+ S Sbjct: 244 ERPEKLIITNIVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESSVSS 302 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 +FL WE+L++EVAQ+INSE RG+ QS ++ L+GF+QRLKGK GRFRGNLSGKRVE+ Sbjct: 303 KFLDGWEILQNEVAQFINSEVRGIPFYMQS-TKQLAGFVQRLKGKHGRFRGNLSGKRVEY 361 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKI+EVA+PILMA ILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++ Sbjct: 362 TGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRR 421 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 GH SL RK AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR Sbjct: 422 DGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 481 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQD Sbjct: 482 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQD 541 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFL+TRKDTFYDRSAF+ +C+++GD +D IDLPTPA+VKPVELW+GKQLFS+LLRP Sbjct: 542 FLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLRP 601 Query: 1896 HAKMRVYLNLTVAEKSYMK------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 1735 HA +VY+NLTV EK+Y K +T+CP DGFVY RN+ELISGQ+GK TLGNGNKD Sbjct: 602 HANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNKD 661 Query: 1734 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 1555 G++SVLLRDY HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L K+K T+ Y Sbjct: 662 GLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEGY 721 Query: 1554 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 1375 C ++I+ + G LEL GCD+ +TLE++I+ LN +R+ VCM+ L+WRNSPLIMS Sbjct: 722 KKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIMS 781 Query: 1374 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 1195 QCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF AK P AKGFV NSFY+G Sbjct: 782 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSG 841 Query: 1194 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 1015 LSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K++EDL + YD TVRNA IVQF Sbjct: 842 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFC 901 Query: 1014 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAM-DQKFLTTDEIKEIVTETIESKLFK 838 YG D MDP ME K G PLNFERLF+K+KA CP D + L++ ++ ++V E + F Sbjct: 902 YGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSE--FG 959 Query: 837 SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRY 658 S E G E D F SL+ FI+ KLT+E ++++ Sbjct: 960 VSREVEKGVLEVGFSAD----------FVQSLQSFIKD-------NTKLTEETFTDDNSQ 1002 Query: 657 HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 478 L+ ISGIT+ QL VFL C+SRY SKK GEPGTQMTLKTFH Sbjct: 1003 ILKKFGERISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFH 1062 Query: 477 FAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXX 298 FAGVASMNVTLGVPR TP+ITA+L Sbjct: 1063 FAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERTDCAN------------------ 1104 Query: 297 XXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKES 118 AR+VKGRIE+T L QVAKSIK TSR AS+++TLD +RI A L+I A+ VKES Sbjct: 1105 ----TARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITLDMERIQDAHLNIDANIVKES 1160 Query: 117 ILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 IL+T K KL+ +HI ILD KL V D RSK F+ Sbjct: 1161 ILQTKKAKLKPEHIKILDVKKLRVVPQDGD-RSKLHFQ 1197 >ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Cicer arietinum] Length = 1399 Score = 1413 bits (3658), Expect = 0.0 Identities = 740/1224 (60%), Positives = 897/1224 (73%), Gaps = 14/1224 (1%) Frame = -1 Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493 FTK+P+IED+GPRKI I +STLS +I K+ EVQV++G YYD RKP GLLD MGP Sbjct: 11 FTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEADGLLDSRMGP 70 Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313 NKS C TC NF +C GH G+L L PVFNVGY+ T+V I+KCICK C+ ILL E R Sbjct: 71 ANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGCAGILLDEDTR 130 Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVK--RQQLKI 3139 + +L++MRN KL+ L+K +L++I+ + S K ++C RCGY+NG+VK R L+I Sbjct: 131 KKYLKKMRNSKLDELQKIQLLESIMKRFRSA-----KFIKCQRCGYINGIVKLTRSTLRI 185 Query: 3138 IHERKNIANNGLDEFQSALSHTQ----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLND 2971 +H+ + N+ + E QSALSH + N +D K V+ L M DEDC LLYL + Sbjct: 186 VHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALLYLAE 245 Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQRF 2791 RPEKL++T+I VPP IRPSV +DG QSNENDITE+L+ IIQANA L E+ E S +F Sbjct: 246 RPEKLIITNIAVPPIVIRPSVIMDGS-QSNENDITEKLRKIIQANAALHKELEE--STKF 302 Query: 2790 LSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTG 2611 +E+L+ VAQYINS+ +G + Q+ S+PL+GF+QR+KGKQGRFR NLSGKRVE+TG Sbjct: 303 QGGFEMLQFLVAQYINSDVKGGPYSMQA-SKPLTGFVQRIKGKQGRFRSNLSGKRVEYTG 361 Query: 2610 RTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPD 2431 RTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ +RNGP KYPGAK ++ Sbjct: 362 RTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAG 421 Query: 2430 GHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTL 2251 G +L RK AD+LR+G IV RHLEDGDVVLFNRQPSLHRMS+M HRARIMPWRTL Sbjct: 422 GTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTL 481 Query: 2250 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 2071 RFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFL Sbjct: 482 RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFL 541 Query: 2070 TSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHA 1891 TSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA++KPVELW+GKQLFS+LLRPHA Sbjct: 542 TSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHA 601 Query: 1890 KMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDG 1732 +RVY+NLTV EK++ + +TMCP DGFVY RNSELISGQLGK TLGNGNKDG Sbjct: 602 NVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNGNKDG 661 Query: 1731 IYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYG 1552 ++SVLLRDY HAAA+CMNRLAK SARWIGNHGFSIGI+DVQP + L KK TI Y Sbjct: 662 LFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETITTGYS 721 Query: 1551 HCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQ 1372 C +I + G LEL+PGCD+A+TLE+KI + LN++R+ TA VCM+ L+WRNSPLIMSQ Sbjct: 722 ECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPLIMSQ 781 Query: 1371 CGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGL 1192 CGSKGSPINICQM+ACVGQQSVGG RA NGF+DR+LPHF K AK P KGFV NSF+TGL Sbjct: 782 CGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSFFTGL 841 Query: 1191 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVY 1012 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL + YD TVR+ + IVQF Y Sbjct: 842 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQFCY 901 Query: 1011 GGDAMDPAQMEEKTGLPLNFERLFMKAKATCPA-MDQKFLTTDEIKEIVTETIESKLFKS 835 G D MDP+ ME K G PLNF+RLF+K+KA CP+ D L++ ++ E++ + + S Sbjct: 902 GDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIRKKL------S 955 Query: 834 SVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYH 655 V + ++ D S G F SL+ F++ N +L E+ ++ + Sbjct: 956 EVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVK-----DNTKLTEAIAENDSKNLTN 1010 Query: 654 LENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHF 475 L+N ISGI++ QL VFL C+SRY+ KK GEPGTQMTLKTFHF Sbjct: 1011 LKNFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHF 1070 Query: 474 AGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXX 295 AGVASMNVTLGVPR KTP++TA+L Sbjct: 1071 AGVASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNAN------------------- 1111 Query: 294 XDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESI 115 AR+VKGRIE+T L QVAKSIK TSRSA+++++LD +RI A L+I A +VKESI Sbjct: 1112 ---TARMVKGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESI 1168 Query: 114 LRTPKMKLQAQHINILDDHKLEVF 43 LRT K+KL+A+++ +LD KL+V+ Sbjct: 1169 LRTAKLKLKAENVKVLDIKKLQVY 1192 >ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] Length = 1383 Score = 1406 bits (3639), Expect = 0.0 Identities = 754/1231 (61%), Positives = 892/1231 (72%), Gaps = 30/1231 (2%) Frame = -1 Query: 3606 LSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGPPNK-SGKCETCAANFTNCPGHC 3430 +SG +I K +E QV+ G YYD RKP+ GLLDP +GP K S CETC A+F CPGH Sbjct: 2 MSGAEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHF 61 Query: 3429 GHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDIL 3250 G+L L LPVFNVGY+ I+ I+KCICK CSRIL EK + L++MRNP++EHL+K++++ Sbjct: 62 GYLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELV 121 Query: 3249 KAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKIIHERKNIANNGLDEFQSALSH 3076 K IV KC+SM + KAV+C+RCG +NGMVK+ L IIH+R + + L+E +SA++H Sbjct: 122 KKIVKKCSSMT--SNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAH 179 Query: 3075 TQ---ANVSLPSTIDAKM-VYELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSV 2908 T+ A +SL + I + V L K + +EDCE+L L DRPEKL++T+I VPP +IRPSV Sbjct: 180 TKESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSV 239 Query: 2907 FVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ--RFLSNWELLRDEVAQYINSEA 2734 F DG QSNENDITERLK IIQANA LR E+ E ++L +W+ L+ VA Y+NS+ Sbjct: 240 FTDGL-QSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDV 298 Query: 2733 RGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPI 2554 R + NN + +PLSGF+QRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVA+PI Sbjct: 299 R-VPNNVEVG-KPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPI 356 Query: 2553 LMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLR 2374 MARIL+YPERVSHHNIEKLRQ V NGPQKYPGA ++ PDG L+ RK A++L Sbjct: 357 HMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELT 416 Query: 2373 YGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEM 2194 +GCIV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEM Sbjct: 417 FGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEM 476 Query: 2193 NMHVPQTEEARTEALMLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAF 2017 NMHVPQTEEARTEAL+LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDR+AF Sbjct: 477 NMHVPQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAF 536 Query: 2016 SLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMK- 1840 SLMCSY+ D MD IDLPTPA++KP+ELWTGKQLFSVLLRP+A +RVY+NL V EK Y K Sbjct: 537 SLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKP 596 Query: 1839 ------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCM 1678 KETMCP DGFVYIRNSELISGQLGKATLGNGNKDG+YS+LLRDY PHAAATCM Sbjct: 597 KKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCM 656 Query: 1677 NRLAKLS--ARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLEL 1504 NRLAKL ARWIGNHGFSIGI+DVQPG L K TI Y C I +Y G L L Sbjct: 657 NRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLL 716 Query: 1503 SPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIAC 1324 PGCD+ +TLES+I+E LN +RE +VCMK L+WRNSPLIMSQCGSKGS INI QM+AC Sbjct: 717 KPGCDATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVAC 776 Query: 1323 VGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGL 1144 VGQQSVGGRRAP+GFIDR+LPHF + +K P AKGFV NSFY+GL ATEFFFHTM GREGL Sbjct: 777 VGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGL 836 Query: 1143 VDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGL 964 VDTAVKTADTGYMSRRLIK LEDLSI YDNTVRNAS CIVQF+YG D +DPA ME K G+ Sbjct: 837 VDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGV 896 Query: 963 PLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDA 784 PLN +RLF K KATCP ++ +L+ +I ++V E+ L K + G Sbjct: 897 PLNLDRLFSKVKATCPVREEDYLSPLDISDVV----ENLLLKHDMALGG----------- 941 Query: 783 PSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTK--EEHSEE---------DRYHLENVAS 637 C +AF SL F+ +KL E+ + E + +E +A Sbjct: 942 ----ICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAH 997 Query: 636 NISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASM 457 I G+++ Q+ VF++TCI+RY K+ GEPGTQMTLKTFHFAGVASM Sbjct: 998 KIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1057 Query: 456 NVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAR 277 N+T GVPR TP+ITA L AAR Sbjct: 1058 NITQGVPRIKEIINGAKKISTPIITAEL----------------------EQNTNVTAAR 1095 Query: 276 LVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKM 97 + KGRI++T+L QVAKSIK TSRSAS+++TLD I AQLS+ A+ VKE+ILRTP++ Sbjct: 1096 IAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRI 1155 Query: 96 KLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 KL+ QHI +LD KLEV P R + FE Sbjct: 1156 KLKPQHIKVLDTRKLEVI--PLGDRERVHFE 1184 >emb|CBI16226.3| unnamed protein product [Vitis vinifera] Length = 1819 Score = 1396 bits (3613), Expect = 0.0 Identities = 708/1035 (68%), Positives = 824/1035 (79%), Gaps = 11/1035 (1%) Frame = -1 Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499 +QFTK+PYIEDVGPRKIESI+F+ S ++I K +EVQV++G YYD RKP+ GLLDP M Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64 Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319 GP NK+G C TC NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124 Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQL 3145 +D+L++MR+ K+E LKK +++K IV KC +M +KKAV+CSRCGY+NG+VK+ L Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183 Query: 3144 KIIHERKNIANNGLDEFQSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2974 IIH+R IA+ L+E SA+SHT+ A+ S+ ++ V L K M DEDC+LL L Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243 Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 2797 +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L E+ +T S Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + L+ W+ L+ EVAQYINS+ RG+ Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+ Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG SL++ RK AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR Sbjct: 423 PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 483 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++K +ELWTGKQLF+VLLRP Sbjct: 543 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRP 602 Query: 1896 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 1723 HA +RVYLNLTV EK+Y K KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S Sbjct: 603 HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662 Query: 1722 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 1543 VLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG LN +K I+ Y +C Sbjct: 663 VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722 Query: 1542 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 1363 + I++Y G L+L PGC++A+TLE++I+ LN IRE TANVCM+ L+WRNSPLIMSQCGS Sbjct: 723 ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782 Query: 1362 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 1183 KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT Sbjct: 783 KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842 Query: 1182 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 1003 EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+ IVQF+YG D Sbjct: 843 EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902 Query: 1002 AMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTF 823 MDPA+ME K G PLNF RLF+K KATCPA + L+ +I+E V E Sbjct: 903 GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHN-------- 954 Query: 822 EGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEHSEEDRYHL 652 S EGC AF +L F+E +K ++ L L E EE+ Sbjct: 955 -------------TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQ 1001 Query: 651 ENVASNISGITKGQL 607 E A NISGIT QL Sbjct: 1002 EKFAKNISGITSKQL 1016 Score = 151 bits (382), Expect = 2e-33 Identities = 102/229 (44%), Positives = 126/229 (55%), Gaps = 1/229 (0%) Frame = -1 Query: 687 KEEHSEEDRYHLENVASNISG-ITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGE 511 ++ E+ Y L ++ +++ ++ +L VFL TCISRYQ K+ GE Sbjct: 1425 RQRVKEKINYQLVDMTNDVEEQSSRKRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGE 1484 Query: 510 PGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXX 331 PGTQMTLKTFHFAGVASMNVTLGVPR TP+ITA L Sbjct: 1485 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVK------- 1537 Query: 330 XXXXXXXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQ 151 AR+VKGRIERT L QVAKSIK TSR A I V LD + I +Q Sbjct: 1538 ---------------TARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQ 1582 Query: 150 LSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 LSI ++ V+ESILR ++KL+ QHI +LD KLEV +P RS FE Sbjct: 1583 LSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEV--HPQGDRSTIHFE 1629 >ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Fragaria vesca subsp. vesca] Length = 1390 Score = 1395 bits (3610), Expect = 0.0 Identities = 732/1238 (59%), Positives = 889/1238 (71%), Gaps = 18/1238 (1%) Frame = -1 Query: 3681 TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 3502 T+ FTK+P+IE+ G +I QF+ +S ++I K++ Q++ G+YYD +KP+ GGLLD Sbjct: 9 TIAFTKEPFIEEEGHCRIAQWQFNAMSQSEISKMAATQIFLGRYYDSNQKPIRGGLLDAR 68 Query: 3501 MGPPNKS-GKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLK 3325 +GP NK G CETC A ++CPGH G+L LA+PVFNVGY+ T+V ++KCICK CSRI+L Sbjct: 69 LGPANKQCGDCETCGAKLSDCPGHFGYLVLAVPVFNVGYLSTVVDVLKCICKSCSRIILD 128 Query: 3324 EKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ- 3148 +K R FL +R+PK + K+ +K IV KC SM N ++V+C +CGY+NG VKR Q Sbjct: 129 DKSRSRFLNVVRDPKKD---KSVTMKLIVKKCTSM-SSNNRSVKCPKCGYMNGSVKRAQG 184 Query: 3147 -LKIIHERKNIANNGLDEFQSA---LSHTQANVSL-PSTIDAKMVYELLKNMRDEDCELL 2983 L I+H +D+F+S + +A+++L P ++ V+ L K M DEDCELL Sbjct: 185 MLAIVH-------GAVDDFKSVNPVMKDPKASINLQPHMLNPVKVFSLFKRMLDEDCELL 237 Query: 2982 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE 2803 L RPE L++T+I VPP AIRPSV VDG QSNENDITERLK IIQ NAC++ +++E Sbjct: 238 NLKSRPENLIMTTIAVPPIAIRPSVLVDGS-QSNENDITERLKKIIQTNACVQQDLSEGS 296 Query: 2802 SQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRV 2623 + RFLSNWE+L+ EVA YINS+ RG+ + +N++PL+G +QRLKGK GRFRGNL GKRV Sbjct: 297 TTRFLSNWEILQAEVALYINSDVRGVPYHMTANAKPLNGLVQRLKGKTGRFRGNLCGKRV 356 Query: 2622 EFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFI 2443 E+TGRTVISPDPNLKITEV +PI MA+IL+YPERVS HNIEKLR+ V NGP KYPGA + Sbjct: 357 EYTGRTVISPDPNLKITEVGIPIQMAQILSYPERVSDHNIEKLRRCVANGPFKYPGALVL 416 Query: 2442 KTPDGHEISL-VYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 2266 K +G E SL + R HAD L+ G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIM Sbjct: 417 KCQNGEEWSLKAGQKRMSHADNLKPGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIM 476 Query: 2265 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2086 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+MLMGVQNNLCTPKNGEILVAS Sbjct: 477 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEILVAS 536 Query: 2085 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 1906 TQDFLTSSFLITRKDTFYDR++FSLMCSY+GD + +DLPTPA+VKP+ELWTGKQL+SVL Sbjct: 537 TQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTEHVDLPTPAVVKPIELWTGKQLYSVL 596 Query: 1905 LRPHAKMRVYLNLTVAEKSYMKSK-------ETMCPKDGFVYIRNSELISGQLGKATLGN 1747 +RP++ +RVYLNLTV EKSY K E MCP DGFVY RNSEL+SGQLGK TLGN Sbjct: 597 VRPNSNVRVYLNLTVREKSYSNRKTEDGREIEAMCPNDGFVYFRNSELLSGQLGKGTLGN 656 Query: 1746 GNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTI 1567 GNKDG++SVLLRDY HAAA+CMNR+AKLSARWIGNHGFSIGI+DVQP D L EK+ I Sbjct: 657 GNKDGLFSVLLRDYKAHAAASCMNRVAKLSARWIGNHGFSIGISDVQPSDILYGEKEKII 716 Query: 1566 DMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSP 1387 Y C D I+ Y G L L+PGCD+A++LES I+ LN+IR+ T +CM+ L+WRNSP Sbjct: 717 KKGYDKCDDQIKLYKEGQLRLAPGCDAAQSLESGITAVLNDIRDQTGKLCMQTLHWRNSP 776 Query: 1386 LIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNS 1207 LIMSQCGSKGS INI QM+ACVGQQSVGGRRAPNGFIDR+LPHF + P AKGFV +S Sbjct: 777 LIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNTPAAKGFVASS 836 Query: 1206 FYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACI 1027 FY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD TVR A+ I Sbjct: 837 FYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKTVRAANGGI 896 Query: 1026 VQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESK 847 VQF YG D MDPA ME K+G PL+F RLF +AKATCPA + + L+ DE+ EIV S+ Sbjct: 897 VQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIV----RSR 952 Query: 846 LFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEH 676 L + +T +G GC F S++ F++ K + L + Sbjct: 953 LSEQDMTPDG---------------GCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPG 997 Query: 675 SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 496 E L+N+ NISG+T QL VFL TCISRY SKK GEPGTQM Sbjct: 998 WEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQM 1057 Query: 495 TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXX 316 TLKTFHFAGVASMNVTLGVPR TP+IT VL Sbjct: 1058 TLKTFHFAGVASMNVTLGVPRIKEIINGAKNIHTPIITTVL------------------- 1098 Query: 315 XXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 136 + AR+V GRIE+T L QVA+ I+ + R+A + V LD I A LSI A Sbjct: 1099 ---ECDNNPMIARMVAGRIEKTNLGQVAECIEIVMSPRAAYVEVKLDMAVIQDAHLSIDA 1155 Query: 135 SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKR 22 + VK+SIL TP++KL+ +HI + D+ +EV + D+R Sbjct: 1156 NVVKQSILGTPRIKLKHEHIRVPDNQTVEVHSHEKDRR 1193 >ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata] Length = 1376 Score = 1387 bits (3589), Expect = 0.0 Identities = 727/1219 (59%), Positives = 872/1219 (71%), Gaps = 14/1219 (1%) Frame = -1 Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499 ++FTKQPYIEDVGP KI+SI FS LS ++ K +EVQV++ YY+ KP GLLD M Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66 Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319 GPPNK C TC NF NCPGH G+L L LPV+NVG+ I+ I+KCICK+CS +LL EK Sbjct: 67 GPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEK 126 Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR----Q 3151 +D LR+MRNPK+E LKK ++ KA+V KC++M +++ + C +CGY+NGMVK+ Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA--SQRIITCKKCGYLNGMVKKIAAQM 184 Query: 3150 QLKIIHERKNIANNGLDEFQSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELL 2983 + I H+R I +DE +SA+SHT+ + L +D +V L K M D+DCELL Sbjct: 185 GIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELL 244 Query: 2982 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-T 2806 Y+ RPE L+ T +LVPP +IRPSV + GG +SNENDITERLK IIQ NACL +++ T Sbjct: 245 YIAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPT 303 Query: 2805 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 2626 S + + W+ ++ EVA+YINSE RG+ N Q PLSG +QRLKGKQGRFR NLSGKR Sbjct: 304 TSPKNMQVWDTVQSEVAKYINSEVRGVQN--QPEKTPLSGLLQRLKGKQGRFRANLSGKR 361 Query: 2625 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 2446 VE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 VEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARN 421 Query: 2445 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 2266 ++ PDG +LV + RK AD+L GCIV RHLE+GD VLFNRQPSLHRMSIM HRARIM Sbjct: 422 VRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIM 481 Query: 2265 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2086 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 541 Query: 2085 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 1906 TQDFLT+SFLITRKDTFYDR+AFSL+CSY+GD MD+IDLPTP ++KP+ELWTGKQLFSVL Sbjct: 542 TQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVL 601 Query: 1905 LRPHAKMRVYLNLTVAEKSYMKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGNK 1738 LRP+A +RVY+ L V EK++ K + ETMC DG+VY RNSELISGQLGKATLGNGNK Sbjct: 602 LRPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGNK 661 Query: 1737 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 1558 DG+YS+LLRDY HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG+ LNKE+K +I Sbjct: 662 DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFG 721 Query: 1557 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 1378 Y C I + G+L+L G D A++LE++I+ LN IREAT CM L+WRNSPLIM Sbjct: 722 YDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIM 781 Query: 1377 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 1198 SQCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 782 SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYS 841 Query: 1197 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 1018 GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 901 Query: 1017 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMD-QKFLTTDEIKEIVTETIESKLF 841 YG D MDPA ME K G PLNF+RLF+K +ATCP +L+++E+ ++ E +L Sbjct: 902 TYGDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEEL----SQKFEEELV 957 Query: 840 KSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDR 661 + H +S C AF SL++F+ S L +K Sbjct: 958 R--------HDKSRV---------CTDAFVKSLREFV------SLLGVKSAS-------- 986 Query: 660 YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTF 481 V SG+T QL VF++ C+SRY+ KK GEPGTQMTLKTF Sbjct: 987 --TPQVLYKASGVTDKQLEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTF 1044 Query: 480 HFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXX 301 HFAGVASMN+T GVPR TPVI+A L Sbjct: 1045 HFAGVASMNITQGVPRINEIINASKNISTPVISAEL----------------------EN 1082 Query: 300 XXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKE 121 +AR VKGRIE+T L QVA+SI+ TS SAS+ + LD I+ A LSI SVK Sbjct: 1083 PLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSISPWSVKN 1142 Query: 120 SILRTPKMKLQAQHINILD 64 SIL+TP++KL I +LD Sbjct: 1143 SILKTPRIKLNDNDIRVLD 1161 >ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum] gi|557101978|gb|ESQ42341.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum] Length = 1375 Score = 1384 bits (3581), Expect = 0.0 Identities = 729/1218 (59%), Positives = 875/1218 (71%), Gaps = 13/1218 (1%) Frame = -1 Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499 ++FTKQPYIEDVGP KI+SI FS S +I K +EVQV++ YY+ KPV GGLLDP M Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66 Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319 GPPNK C TC A+F NCPGH G+L L LPV+NVG++ I+ I+KCICK+CS IL+ EK Sbjct: 67 GPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEK 126 Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQL 3145 +D L++MRNPK+E LKK ++ KA+V KC+ M +++ + C CGY+NGMVK+ Q+ Sbjct: 127 LYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMA--SQRIITCKNCGYLNGMVKKVAAQM 184 Query: 3144 KII---HERKNIANNGLDEFQSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCEL 2986 II H+R I +DEF+SA+SHT+ + L +D +V L K M D+DCEL Sbjct: 185 GIIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCEL 244 Query: 2985 LYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANA-CLRSEMAE 2809 LY+ RPE L + + VPP RPSV + GG QSNEND+TER+K I+Q NA C + Sbjct: 245 LYIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQA 303 Query: 2808 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 2629 T S + + W+ ++ EVAQYINSE RG+ N Q +S+PLSG +QRLKGKQGRFR NLSGK Sbjct: 304 TTSPKNMQVWDTVQSEVAQYINSEVRGIPN--QPDSKPLSGILQRLKGKQGRFRANLSGK 361 Query: 2628 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 2449 RVE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 421 Query: 2448 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 2269 ++ PDG +LV + RK AD+L GCIV RHLE+GD VLFNRQPSLHRMSIM HRARI Sbjct: 422 SVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 481 Query: 2268 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 2089 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVA Sbjct: 482 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 541 Query: 2088 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 1909 STQDFLTSS+LITRKDTFYDR+AFSL+CSY+GDAMD+IDLPTP ++KP+ELWTGKQ+FSV Sbjct: 542 STQDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSV 601 Query: 1908 LLRPHAKMRVYLNLTVAEKSYMKSK--ETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 1735 LLRP+A +RVY+ L V EK++ K K ETMC DG+VY RNSELISGQLGKATLGNGNKD Sbjct: 602 LLRPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNKD 661 Query: 1734 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 1555 G+YSVLLRDY HAAA CMNRLAKLSARWIG HGFS+GI+DVQPG+ L +E++ I+ Y Sbjct: 662 GLYSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGY 721 Query: 1554 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 1375 C IR + G L+L G D+A++LES I+ LN IREAT +CM+ L+WRNSPLIMS Sbjct: 722 EDCGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMS 781 Query: 1374 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 1195 QCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P+AKGFV NSFY+G Sbjct: 782 QCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSG 841 Query: 1194 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 1015 L+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 LTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFT 901 Query: 1014 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMD-QKFLTTDEIKEIVTETIESKLFK 838 YG D MDP ME K G PLNF+RLF+K +ATCP FL+++E+ + E +L + Sbjct: 902 YGDDGMDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEEL----LQKFEEELVR 957 Query: 837 SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRY 658 H S C AF SL++F+ S L L+ T Sbjct: 958 --------HDTSRV---------CTDAFVKSLREFL------SLLGLRSTSP-------- 986 Query: 657 HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 478 V SG+T Q+ VF++ C+SRY+ K GEPGTQMTLKTFH Sbjct: 987 --SQVFYKASGVTDKQIEVFVKICVSRYREKTIEAGTAIGTIGAQSIGEPGTQMTLKTFH 1044 Query: 477 FAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXX 298 FAGVASMN+T GVPR TPVI+A L Sbjct: 1045 FAGVASMNITQGVPRINEIINASKNISTPVISAEL----------------------ENP 1082 Query: 297 XXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKES 118 +AR VKGRIE+T L QVA+SI+ TS SAS+ + LD RI+ A LSI SVK S Sbjct: 1083 LELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKRIEEACLSISPWSVKTS 1142 Query: 117 ILRTPKMKLQAQHINILD 64 IL+TP++KL +I ILD Sbjct: 1143 ILKTPRIKLNDDNIRILD 1160 >ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group] gi|38347455|emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group] gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group] gi|116310339|emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa Indica Group] gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa Indica Group] gi|215768005|dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195112|gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group] Length = 1383 Score = 1381 bits (3574), Expect = 0.0 Identities = 722/1240 (58%), Positives = 877/1240 (70%), Gaps = 15/1240 (1%) Frame = -1 Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499 ++ TK+P+IEDVG R+I+SI+FS SG ++++ +EVQV+ + Y+ KPV GLLD M Sbjct: 8 LRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPNGLLDTRM 67 Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319 G NK G+C TC +F CPGH G+L LALPVFNVG+ I+ ++KCICK CSR+LL EK Sbjct: 68 GAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRVLLMEK 127 Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVK--RQQL 3145 DR +FL++MRNPK + L+K+ I+K + KC K C CG++NG+ K R L Sbjct: 128 DRLEFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVAKKGRAGL 179 Query: 3144 KIIHERKNIANNGLDEFQSALSHTQANVSLPST--IDAKMVYELLKNMRDEDCELLYLND 2971 I+H+ + +E + ALSH + +S+ + +D +V L K M DEDCELL L D Sbjct: 180 IILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGD 239 Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-- 2797 RPEKL+VT I VPP IRPSVFV GG SNE+ IT LK I N+ L+ + +T Q Sbjct: 240 RPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENL-QTGGQFM 298 Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617 + W+ L+ +V +YINS+A L + G +QRLKGK GRFRGNLSGKR E+ Sbjct: 299 KCFDCWQHLQLQVVEYINSDAPSLPESQHR------GLVQRLKGKTGRFRGNLSGKRTEY 352 Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437 TGRTVISPDPNL+ITEVA+PILMAR+LTYPERVS++NIEKLRQ +RNGP K+PGA FI Sbjct: 353 TGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQ 412 Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257 PDG ++ L Y R+ A L+YGC+V RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR Sbjct: 413 PDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 472 Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077 TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 473 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 532 Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897 FLTSSFL+TRKD FYDRS+FSL+CSYLGDAM++IDLPTPAL+KP+ELWTGKQLFSVL+RP Sbjct: 533 FLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRP 592 Query: 1896 HAKMRVYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 1735 +A +V+LNLTV EK Y K E MCP DGFVY RNSEL+SGQ+GKATLGNGNKD Sbjct: 593 NACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKD 652 Query: 1734 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 1555 G++S L+RDY HAAA+CMNRLAK SAR+IGNHGFSIG++DVQPG+ LN+EKK+ ID Y Sbjct: 653 GMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGY 712 Query: 1554 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 1375 C D I Y+ G+L L PGC++A+TLE I+ LN IRE VCM L+WRNSPLIMS Sbjct: 713 KDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMS 772 Query: 1374 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 1195 QCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDRTLPHF +K P AKGFV NSFYTG Sbjct: 773 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTG 832 Query: 1194 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 1015 L+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+FYD TVRNAS IVQF+ Sbjct: 833 LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFL 892 Query: 1014 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKS 835 YG D MDPA+ME K G PLN ++LFMK ATCP Q L+ EI +I+ + + Sbjct: 893 YGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEH---- 948 Query: 834 SVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEEH-SEED 664 DA S +GC + F L F+E K S R L E+H E Sbjct: 949 ---------------DASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERH 993 Query: 663 RYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKT 484 E++A+NISGI+ QL VFL TC+SRY KK GEPGTQMTLKT Sbjct: 994 SSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKT 1053 Query: 483 FHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXX 304 FHFAGVASMNVTLGVPR TP+ITA L Sbjct: 1054 FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAEL----------------------L 1091 Query: 303 XXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVK 124 ++AR+VKG +E+ +L +VA++IK S +++V LD RI+ + I A SV+ Sbjct: 1092 SEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQ 1151 Query: 123 ESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4 SIL PK+KL+++H+ ++D KL ++ DK SK ++E Sbjct: 1152 LSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDK-SKLLYE 1190