BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00011027
         (3687 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus...  1658   0.0  
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...  1597   0.0  
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...  1570   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1570   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1566   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1545   0.0  
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...  1521   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1504   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1500   0.0  
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...  1446   0.0  
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...  1444   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...  1428   0.0  
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas...  1420   0.0  
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...  1413   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...  1406   0.0  
emb|CBI16226.3| unnamed protein product [Vitis vinifera]             1396   0.0  
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...  1395   0.0  
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...  1387   0.0  
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr...  1384   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...  1381   0.0  

>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
          Length = 1394

 Score = 1658 bits (4294), Expect = 0.0
 Identities = 851/1222 (69%), Positives = 977/1222 (79%), Gaps = 7/1222 (0%)
 Frame = -1

Query: 3684 GTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDP 3505
            GT+QFTK+PY+EDVGPR+IESIQFST S  ++ K  EV+V +  YYDE RKP+  GLLD 
Sbjct: 5    GTIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDQ 64

Query: 3504 HMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLK 3325
             MGP NKS  C+TC   F +CPGH G+L LALPV+NVG+  TI+ I+KCICK CSR+LL 
Sbjct: 65   RMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLA 124

Query: 3324 EKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--Q 3151
            +KD Q FL++MRNPK E LKK +I K +V KCNS+ G +K+AV+CSRCGY+NGMVK+  +
Sbjct: 125  DKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAG-SKRAVKCSRCGYINGMVKKAKE 183

Query: 3150 QLKIIHERKNIANNGLDEFQSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLY 2980
             LKI H+R  + +N LDE +SAL+HT+    N  + STID K  Y LL+NM DEDCELLY
Sbjct: 184  PLKIQHDRAKVVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENMLDEDCELLY 243

Query: 2979 LNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE--T 2806
            L+DRPEKL+VT+ILVPP AIRPSVF      SNENDIT RLK IIQ NA +  EM++  +
Sbjct: 244  LHDRPEKLIVTNILVPPIAIRPSVFSTRA-MSNENDITSRLKQIIQINAAVLQEMSDQSS 302

Query: 2805 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 2626
            +SQ   +NW+ L+ EVAQYINS+ R     S+ N++PLSGF+QRLKGKQGRFRGNLSGKR
Sbjct: 303  QSQSLTNNWDSLQVEVAQYINSDVRVPLQYSE-NTKPLSGFVQRLKGKQGRFRGNLSGKR 361

Query: 2625 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 2446
            VEFTGRTVISPDPNLKI EVAVPILMA+IL+YPERVSHHNIE+LRQ VRNGP KYPGAKF
Sbjct: 362  VEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPGAKF 421

Query: 2445 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 2266
            IK PDG EISL  + R   AD L+YG IV RHL+DGD++LFNRQPSLHRMSIMSHRARIM
Sbjct: 422  IKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIM 481

Query: 2265 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2086
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 482  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 541

Query: 2085 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 1906
            TQDFLTSS+LITRKDTFYDR++FSL+CSY+GDAMD IDLPTPALVKPVELWTGKQLFS+L
Sbjct: 542  TQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSIL 601

Query: 1905 LRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIY 1726
            LRPHAKMRVY+NLTVAEK+Y KS ETMCPKDGFVYIRNSELISGQLGKATLGNG+KDG+Y
Sbjct: 602  LRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKDGLY 661

Query: 1725 SVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHC 1546
            SVLLRDY  HAAATCMNRLAKLSARWIGNHGFSIGINDVQPG  LNKEKKVTID  YG C
Sbjct: 662  SVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQC 721

Query: 1545 TDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCG 1366
             DYI  Y SGSL+L PGC++AETLE+ I+ TLNNIRE TANVCM NL+WRNSPLIMSQC 
Sbjct: 722  IDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQCD 781

Query: 1365 SKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSA 1186
                        ACVGQQSVGGRRAPNGF+DRTLPHFE+ AKDPDAKGFVQNSFYTGLSA
Sbjct: 782  G-----------ACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSA 830

Query: 1185 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGG 1006
            TEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YD TVRNAS CIVQFVYGG
Sbjct: 831  TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDGTVRNASVCIVQFVYGG 890

Query: 1005 DAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVT 826
            DAMDP QMEEK+GLPLNFERLFMKAKATCPA++QK L+ +EI + + E I  +L +S+ T
Sbjct: 891  DAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTAT 950

Query: 825  FEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLEN 646
             EG    S     + +KEG ++ F  SL+ FI+KK P+S+L LKL  +EHS+ED+ +LE 
Sbjct: 951  PEG--ESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHSDEDKGYLEK 1008

Query: 645  VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGV 466
            +ASNI G+T+ QLMVFL TCISRY+ KK               GEPGTQMTLKTFHFAGV
Sbjct: 1009 IASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1068

Query: 465  ASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXDV 286
            ASMNVTLGVPR            TP+I+  L                           ++
Sbjct: 1069 ASMNVTLGVPRIKEIINAAKKINTPIISTAL----------------------QSDNNEI 1106

Query: 285  AARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRT 106
             A++VKGRIE+TLLEQVAKSIKTSQ SRS SI++TLD  +I GA LS+ A +VKESIL+T
Sbjct: 1107 IAKIVKGRIEKTLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKT 1166

Query: 105  PKMKLQAQHINILDDHKLEVFL 40
             +MKL+ Q + +LD  KLE+ +
Sbjct: 1167 KRMKLKEQQVKVLDHRKLEIVM 1188


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score = 1597 bits (4136), Expect = 0.0
 Identities = 817/1228 (66%), Positives = 950/1228 (77%), Gaps = 3/1228 (0%)
 Frame = -1

Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499
            +Q TKQPYIEDVG R+IESI FSTLSG+++ K + V+VY+G YYD  +KPV  GLLD  M
Sbjct: 1    LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60

Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319
            GPPNK   C TC  NF  CPGH G+L LALPV+NVGY+  IV I+KCICK CSR+LL+EK
Sbjct: 61   GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120

Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQLKI 3139
            +   FLR+MRNP+LE LKK D+ K IV +CNS  G NK A +C RCG++NGMVKR   K+
Sbjct: 121  EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLA-KCPRCGHINGMVKRAPYKV 179

Query: 3138 IHERKNIANNGLDEFQSALSHTQANV-SLPSTIDAKMVYELLKNMRDEDCELLYLNDRPE 2962
            +++R  + ++ ++E QSA    +A+  +  ST+DA  V+ LL+NM DEDCELLY++DRPE
Sbjct: 180  MYDRGRVIDSQMEECQSAGPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIHDRPE 239

Query: 2961 KLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-QRFLS 2785
            KLMVT+ILVPPTAIRPSVFVDGG QSNENDITERLK+II+ANA L  ++ ET   ++ ++
Sbjct: 240  KLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYKKGVT 299

Query: 2784 NWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRT 2605
            +WE L+ EVAQYINS+ RGL      +S+PLSGF+QRLKGKQGRFRGNLSGKRVE+TGRT
Sbjct: 300  SWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRT 359

Query: 2604 VISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGH 2425
            VISPDPNLKITEVAVPILMA+ILTYPERVSH NI +LR+ VR GP +YPGAKFI+ PDG 
Sbjct: 360  VISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQPDGT 419

Query: 2424 EISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRF 2245
            EISL + +RK HAD L+YG IV RHL+DGD+VLFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 420  EISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 479

Query: 2244 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 2065
            NESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVASTQDFLTS
Sbjct: 480  NESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQDFLTS 539

Query: 2064 SFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKM 1885
            SFLITRKDTFYDRSAFSL+C+++ D + ++DLP PA+VKPVELWTGKQ+FSVLLRP    
Sbjct: 540  SFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRPDKDR 599

Query: 1884 RVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDY 1705
            +V++NLTVAEK Y+KS ETMCP+DGFV IRNSELISGQLGKATLGNG+KDG+YS+LLRDY
Sbjct: 600  KVFVNLTVAEKIYVKSGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSILLRDY 659

Query: 1704 GPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRY 1525
            G HAAA CMNRLAKLSARWIGNHGFSIGINDVQPGD LN EKK  ID EYG C  YI  Y
Sbjct: 660  GAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIRYIESY 719

Query: 1524 TSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPIN 1345
             SG LEL PGC+ AETLE+KI+ TLN IR+ TA VCM NL+WRNSPLIMSQCGSKGSPIN
Sbjct: 720  KSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSKGSPIN 779

Query: 1344 ICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHT 1165
            ICQM+ACVGQQSVGGRRAPNGF+DRTLPHFE+GAKDPDAKGFVQNSFYTGL  TEFFFHT
Sbjct: 780  ICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTEFFFHT 839

Query: 1164 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQ 985
            MGGREGLVDTAVKTADTGYMSRRLIKALEDLS+ YD+TVRNAS CIVQF YG D +DPAQ
Sbjct: 840  MGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDGLDPAQ 899

Query: 984  MEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPE 805
            MEEKTG PLNFERLFMKAKATCP+  Q  L  ++I  I+   IE               E
Sbjct: 900  MEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIE---------------E 944

Query: 804  SSTLPDAPSKEGCLQAFAGSLKDFIEKKC-PSSNLRLKLTKEEHSEEDRYHLENVASNIS 628
            + +  D    E C + F  SL  F+ K+  P+  L  KL  E  S +D+ ++++V S+ S
Sbjct: 945  NHSRSDISEMEKCSETFEASLLRFLNKRVYPTGMLSEKLNSENISLQDKSYVQSVVSSTS 1004

Query: 627  GITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVT 448
            GIT+ QL VFL  C +RY  KK               GEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1005 GITQQQLEVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1064

Query: 447  LGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAARLVK 268
            LGVPR           KTPVIT  L                            + AR+VK
Sbjct: 1065 LGVPRIREIIDAAKKIKTPVITTEL----------------------QRKDCGITARIVK 1102

Query: 267  GRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQ 88
            GRIE+TLL ++AKS+K S+ +R+ASI++ LD   I+ AQL I A +VKESIL TPKMKL+
Sbjct: 1103 GRIEKTLLGEIAKSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAYTVKESILLTPKMKLK 1162

Query: 87   AQHINILDDHKLEVFLNPPDKRSKEVFE 4
             Q I +L+  KL V L    +RSK  FE
Sbjct: 1163 EQQIRVLNRQKLTVSLEA--ERSKLEFE 1188


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score = 1570 bits (4066), Expect = 0.0
 Identities = 813/1235 (65%), Positives = 949/1235 (76%), Gaps = 7/1235 (0%)
 Frame = -1

Query: 3687 QGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLD 3508
            Q ++Q TKQPYIEDVGPRKI+SI+FS  S ++I K +EV+VY G YY+  +KP+  GLLD
Sbjct: 5    QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64

Query: 3507 PHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILL 3328
            P MGPPNK+G CETC  NF  CPGH G+L LALPV+NVGY+GT+V I+KCICK CS ILL
Sbjct: 65   PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124

Query: 3327 KEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ 3148
             +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A  CS+CGY+NGMVK+ Q
Sbjct: 125  DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTAT-CSKCGYMNGMVKKLQ 183

Query: 3147 LKIIHERKNIANNGLDEFQSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCELLYL 2977
            LKI HE+    N  LDE   A+S     +A+VS+P  +D K+VY L KNM DEDCELLYL
Sbjct: 184  LKITHEQ---GNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYL 240

Query: 2976 NDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ 2797
            +DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L  EM+++   
Sbjct: 241  SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV 300

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            + L+ W  L+ EVAQYINS+ RG+  + Q+  RPLSGF QRLKGKQGRFRGNLSGKRVE+
Sbjct: 301  KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGKRVEY 359

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAKFI+ 
Sbjct: 360  TGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH 419

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 420  PDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 479

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD
Sbjct: 480  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 539

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKDTFY+R++FSL+CSY+GDAMD  DLP+PA +KPVELWTGKQLF +LLRP
Sbjct: 540  FLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRP 599

Query: 1896 HAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVL 1717
            ++KMRVY+NLTV EKSY    ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+YSVL
Sbjct: 600  YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 659

Query: 1716 LRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDY 1537
            LRDY  HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+  I   Y  C D 
Sbjct: 660  LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDC 719

Query: 1536 IRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKG 1357
            I ++  G L + PGCD+A+TLE++++ +LN +R+    +CMK L+WRNSPLIMSQCGSKG
Sbjct: 720  ITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKG 779

Query: 1356 SPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEF 1177
            SPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF   +K P AKGFV +SF+ GLSATEF
Sbjct: 780  SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF 839

Query: 1176 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAM 997
            FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG D M
Sbjct: 840  FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM 899

Query: 996  DPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEG 817
            DP+QMEEK G PLNF RLFMK KATCP   +K L+  EI EIV E    +L    +T EG
Sbjct: 900  DPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDMTPEG 955

Query: 816  GHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHLE 649
                           GC +AF  SL DF+ K    +  NLR  L L +E++  +DR +LE
Sbjct: 956  ---------------GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLE 1000

Query: 648  NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 469
             +A NISGITK QL VFL TCISRY  K+               GEPGTQMTLKTFHFAG
Sbjct: 1001 KIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1060

Query: 468  VASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXD 289
            VASMNVTLGVPR            TP+IT  L                            
Sbjct: 1061 VASMNVTLGVPRIKEIINAAKKITTPIITTKL----------------------LSAANL 1098

Query: 288  VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 109
             AAR++K RIE+TLL QVAKS+K    SR ASI ++LD + I  +QL I A +VK+SIL+
Sbjct: 1099 TAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQ 1158

Query: 108  TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            T K+KL+   I +L+  KLEVF  P   + K  FE
Sbjct: 1159 TSKIKLKEHQIKVLNPRKLEVF--PQANKDKLHFE 1191


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1570 bits (4066), Expect = 0.0
 Identities = 813/1235 (65%), Positives = 949/1235 (76%), Gaps = 7/1235 (0%)
 Frame = -1

Query: 3687 QGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLD 3508
            Q ++Q TKQPYIEDVGPRKI+SI+FS  S ++I K +EV+VY G YY+  +KP+  GLLD
Sbjct: 5    QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64

Query: 3507 PHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILL 3328
            P MGPPNK+G CETC  NF  CPGH G+L LALPV+NVGY+GT+V I+KCICK CS ILL
Sbjct: 65   PRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124

Query: 3327 KEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ 3148
             +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A  CS+CGY+NGMVK+ Q
Sbjct: 125  DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTAT-CSKCGYMNGMVKKLQ 183

Query: 3147 LKIIHERKNIANNGLDEFQSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCELLYL 2977
            LKI HE+    N  LDE   A+S     +A+VS+P  +D K+VY L KNM DEDCELLYL
Sbjct: 184  LKITHEQ---GNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYL 240

Query: 2976 NDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ 2797
            +DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L  EM+++   
Sbjct: 241  SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV 300

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            + L+ W  L+ EVAQYINS+ RG+  + Q+  RPLSGF QRLKGKQGRFRGNLSGKRVE+
Sbjct: 301  KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGKRVEY 359

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAKFI+ 
Sbjct: 360  TGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH 419

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 420  PDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 479

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD
Sbjct: 480  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 539

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKDTFY+R++FSL+CSY+GDAMD  DLP+PA +KPVELWTGKQLF +LLRP
Sbjct: 540  FLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRP 599

Query: 1896 HAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVL 1717
            ++KMRVY+NLTV EKSY    ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+YSVL
Sbjct: 600  YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 659

Query: 1716 LRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDY 1537
            LRDY  HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+  I   Y  C D 
Sbjct: 660  LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDC 719

Query: 1536 IRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKG 1357
            I ++  G L + PGCD+A+TLE++++ +LN +R+    +CMK L+WRNSPLIMSQCGSKG
Sbjct: 720  ITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKG 779

Query: 1356 SPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEF 1177
            SPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF   +K P AKGFV +SF+ GLSATEF
Sbjct: 780  SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF 839

Query: 1176 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAM 997
            FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG D M
Sbjct: 840  FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM 899

Query: 996  DPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEG 817
            DP+QMEEK G PLNF RLFMK KATCP   +K L+  EI EIV E    +L    +T EG
Sbjct: 900  DPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDMTPEG 955

Query: 816  GHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHLE 649
                           GC +AF  SL DF+ K    +  NLR  L L +E++  +DR +LE
Sbjct: 956  ---------------GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLE 1000

Query: 648  NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 469
             +A NISGITK QL VFL TCISRY  K+               GEPGTQMTLKTFHFAG
Sbjct: 1001 KIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1060

Query: 468  VASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXD 289
            VASMNVTLGVPR            TP+IT  L                            
Sbjct: 1061 VASMNVTLGVPRIKEIINAAKKITTPIITTKL----------------------LSAANL 1098

Query: 288  VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 109
             AAR++K RIE+TLL QVAKS+K    SR ASI ++LD + I  +QL I A +VK+SIL+
Sbjct: 1099 TAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQ 1158

Query: 108  TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            T K+KL+   I +L+  KLEVF  P   + K  FE
Sbjct: 1159 TSKIKLKEHQIKVLNPRKLEVF--PQANKDKLHFE 1191


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score = 1566 bits (4056), Expect = 0.0
 Identities = 812/1235 (65%), Positives = 948/1235 (76%), Gaps = 7/1235 (0%)
 Frame = -1

Query: 3687 QGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLD 3508
            Q ++Q TKQPYIEDVGPRKI+SI+FS  S ++I KL+EV+VY G YY+  +KP+  GLLD
Sbjct: 5    QESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNGLLD 64

Query: 3507 PHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILL 3328
            P MGPPNKSG CETC  NF  CPGH G+L LALPV+NVGY+GT+V I+KCICK CS ILL
Sbjct: 65   PRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILL 124

Query: 3327 KEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ 3148
             +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A  CS+CGY+NGMVK+ Q
Sbjct: 125  DDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTAT-CSKCGYMNGMVKKLQ 183

Query: 3147 LKIIHERKNIANNGLDEFQSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCELLYL 2977
            LKI HE+    N  LDE   A+S     +A+VS+P  ID K+VY L KNM DEDCELLYL
Sbjct: 184  LKITHEQ---GNRILDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLYL 240

Query: 2976 NDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ 2797
            +DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L  EM+++   
Sbjct: 241  SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV 300

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            + L+ W  L+ EVAQYINS+ RG+    Q   RPLSGF QRLKGKQGRFRGNLSGKRVE+
Sbjct: 301  KSLNQWIDLQMEVAQYINSDVRGVPLQMQP-PRPLSGFTQRLKGKQGRFRGNLSGKRVEY 359

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAKFI+ 
Sbjct: 360  TGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRH 419

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG+E+SL++ +RK +AD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 420  PDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 479

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQD
Sbjct: 480  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD 539

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKDTFY+R++FSL+CSY+GDAMD  DLP+PA +KPVELWTGKQLF VLLRP
Sbjct: 540  FLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRP 599

Query: 1896 HAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVL 1717
            ++KMRVY+NLT+ EKSY    ETMC  DGFVY RNSELISGQLGKATLGNGNKDG+YSVL
Sbjct: 600  YSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL 659

Query: 1716 LRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDY 1537
            LRDY  HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+  I   Y  C D 
Sbjct: 660  LRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDC 719

Query: 1536 IRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKG 1357
            I ++  G L + PGCD+A+TLE++++ +LN +R+    +CMK L+WRNSPLIMSQCGSKG
Sbjct: 720  ITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKG 779

Query: 1356 SPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEF 1177
            SPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF   +K P AKGFV +SF+ GLSATEF
Sbjct: 780  SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEF 839

Query: 1176 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAM 997
            FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG D M
Sbjct: 840  FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGM 899

Query: 996  DPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEG 817
            DP++MEEK G PLNF RLFMK KATCP   +K L+  EI EIV E    +L    +T EG
Sbjct: 900  DPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDMTPEG 955

Query: 816  GHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDRYHLE 649
                           GC +AF  SL DF+ K    +  NLR  L L +E++  +DR +LE
Sbjct: 956  ---------------GCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLE 1000

Query: 648  NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAG 469
             +  NISGITK QL VFL TCISRY  K+               GEPGTQMTLKTFHFAG
Sbjct: 1001 KIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1060

Query: 468  VASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXD 289
            VASMNVTLGVPR            TP+ITA L                            
Sbjct: 1061 VASMNVTLGVPRIKEIINAAKKITTPIITAKL----------------------LSAGNL 1098

Query: 288  VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 109
             AAR++K RIE+TLL QVAKS+K    SR ASI ++LD + I  +QL I A +VK+SIL+
Sbjct: 1099 TAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQ 1158

Query: 108  TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            T K+KL+   I +L+  KLEVF  P   + K  FE
Sbjct: 1159 TSKIKLKEHQIKVLNPRKLEVF--PQANKDKLHFE 1191


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1545 bits (3999), Expect = 0.0
 Identities = 808/1236 (65%), Positives = 936/1236 (75%), Gaps = 11/1236 (0%)
 Frame = -1

Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499
            +QFTK+PYIEDVGPRKIESI+F+  S ++I K +EVQV++G YYD  RKP+  GLLDP M
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319
            GP NK+G C TC  NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQL 3145
              +D+L++MR+ K+E LKK +++K IV KC +M   +KKAV+CSRCGY+NG+VK+    L
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183

Query: 3144 KIIHERKNIANNGLDEFQSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2974
             IIH+R  IA+  L+E  SA+SHT+   A+ S+   ++   V  L K M DEDC+LL L 
Sbjct: 184  GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 2797
            +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L  E+ +T S  
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            + L+ W+ L+ EVAQYINS+ RG+    Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG   SL++  RK  AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++KPVELWTGKQLF+VLLRP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602

Query: 1896 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 1723
            HA +RVYLNLTV EK+Y K   KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S
Sbjct: 603  HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662

Query: 1722 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 1543
            VLLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG  LN +K   I+  Y +C 
Sbjct: 663  VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722

Query: 1542 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 1363
            + I++Y  G L+L PGC++A+TLE++I+  LN IRE TANVCM+ L+WRNSPLIMSQCGS
Sbjct: 723  ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782

Query: 1362 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 1183
            KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT
Sbjct: 783  KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842

Query: 1182 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 1003
            EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+  IVQF+YG D
Sbjct: 843  EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902

Query: 1002 AMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTF 823
             MDPA+ME K G PLNF RLF+K KATCPA +   L+  +I+E V    E          
Sbjct: 903  GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHN-------- 954

Query: 822  EGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEHSEEDRYHL 652
                          S EGC  AF  +L  F+E   +K  ++   L L  E   EE+    
Sbjct: 955  -------------TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQ 1001

Query: 651  ENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFA 472
            E  A NISGIT  QL VFL TCISRYQ K+               GEPGTQMTLKTFHFA
Sbjct: 1002 EKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFA 1061

Query: 471  GVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
            GVASMNVTLGVPR            TP+ITA L                           
Sbjct: 1062 GVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVK-------------------- 1101

Query: 291  DVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESIL 112
               AR+VKGRIERT L QVAKSIK   TSR A I V LD + I  +QLSI ++ V+ESIL
Sbjct: 1102 --TARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESIL 1159

Query: 111  RTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            R  ++KL+ QHI +LD  KLEV  +P   RS   FE
Sbjct: 1160 RNRRIKLKQQHIKVLDAGKLEV--HPQGDRSTIHFE 1193


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score = 1521 bits (3937), Expect = 0.0
 Identities = 796/1242 (64%), Positives = 932/1242 (75%), Gaps = 18/1242 (1%)
 Frame = -1

Query: 3675 QFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMG 3496
            +FTK+PYIEDVGPRKI+SIQFS LS ++I K +EVQVYQ  YYD + +P+ GGLLDP MG
Sbjct: 4    KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63

Query: 3495 PPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKD 3316
            P NKSGKC TC  NF +CPGH G+L+LALPV+NVGY+ TI+ I+KCICK CSRI+L EK 
Sbjct: 64   PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123

Query: 3315 RQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQ--QLK 3142
             +D+L+RMR+PK++ LKK DI+K+IV KC++M   + KAV+C RCGYVNG VK+    L 
Sbjct: 124  CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMA--SSKAVKCWRCGYVNGTVKKAVAMLG 181

Query: 3141 IIHERKNIANNGLDEFQSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELLYLN 2974
            IIH+R  I +N L+EF+SA+SHT+ + +        ++   V  L K M D DCELLYL+
Sbjct: 182  IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241

Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ- 2797
            DRPEKL++T+I VPP  IRPSV +DG  QSNENDITERLK IIQANA LR E+ ET +  
Sbjct: 242  DRPEKLIITNIAVPPIPIRPSVIMDGS-QSNENDITERLKRIIQANASLRQELVETNAAF 300

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            + L  WE+L+ EVAQYINS+ RG+  + Q  S+PLSGF+QR+KGK GRFRGNLSGKRVE+
Sbjct: 301  KCLGGWEMLQVEVAQYINSDVRGVPFSMQV-SKPLSGFVQRIKGKHGRFRGNLSGKRVEY 359

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PI MARILTYPERVS+HNIEKLRQ VRNGP KYPGA+ ++ 
Sbjct: 360  TGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRY 419

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG    L+ + RK  AD+L++GC+V RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 420  PDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWR 479

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 480  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 539

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKD FYDR+AFSL+CSY+GD MD IDLPTPAL+KP+ELWTGKQLFSVLLRP
Sbjct: 540  FLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRP 599

Query: 1896 HAKMRVYLNLTVAEKSYMK-----------SKETMCPKDGFVYIRNSELISGQLGKATLG 1750
            HA +RVYLNL V E++Y K             ETMCP DGFVYIRNSELI GQLGKATLG
Sbjct: 600  HASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLG 659

Query: 1749 NGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVT 1570
            NGNKDG+YSVLLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG  LN EK +T
Sbjct: 660  NGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALT 719

Query: 1569 IDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNS 1390
            I  +Y  C + I+ +  G L+  PG D+A+TLE+ ++  LNNIR+ T  VCMK L+WRNS
Sbjct: 720  ISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNS 779

Query: 1389 PLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQN 1210
            PLIMSQCGSKGS INI QMIACVGQQSVGGRRAPNGFIDR+LPHF +G+K P AKGFV N
Sbjct: 780  PLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVAN 839

Query: 1209 SFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASAC 1030
            SFY+GL+ATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSI YDNTVRNAS C
Sbjct: 840  SFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGC 899

Query: 1029 IVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIES 850
            IVQF+YG D MDPA ME K+G PLNF+RL MK KATCP ++QK L    I +++ E +  
Sbjct: 900  IVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAK 959

Query: 849  KLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSE 670
                        H  +           C +AF  SLK F++ +    +  +KL    +  
Sbjct: 960  ------------HDPAGV---------CSEAFKKSLKGFLKSQTNELDRVMKLV--NNCA 996

Query: 669  EDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTL 490
            +    LE V   ISGI+  QL VF+ TCISRY+SK                GEPGTQMTL
Sbjct: 997  QKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTL 1056

Query: 489  KTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXX 310
            KTFHFAGVASMN+T GVPR            TPVITA L                     
Sbjct: 1057 KTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPN-------------- 1102

Query: 309  XXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASS 130
                     A++VKGRIE+T+L QVAKSIK   TSRSAS+++TLD + I  A+L I A+ 
Sbjct: 1103 --------IAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANI 1154

Query: 129  VKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            VKESIL+TPK+KL+ QH+ +LD  KLEV   PP  RS+  FE
Sbjct: 1155 VKESILQTPKIKLKEQHVKVLDGRKLEVV--PPADRSQIHFE 1194


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1504 bits (3895), Expect = 0.0
 Identities = 786/1244 (63%), Positives = 920/1244 (73%), Gaps = 18/1244 (1%)
 Frame = -1

Query: 3681 TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 3502
            ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY   R P+ GGLLDP 
Sbjct: 11   SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPR 70

Query: 3501 MGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKE 3322
            MGP NKS  C TC   F+NCPGH G+LTLALPV+NVGY+ TI+ I+KCICK CSR+LL+E
Sbjct: 71   MGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEE 130

Query: 3321 KDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ-- 3148
            K  +D+L++MRNPK+E L+K D++K+IV KC++M     KAV+C RCGY+NGMVK+    
Sbjct: 131  KLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYINGMVKKAVAV 187

Query: 3147 LKIIHERKNIANNGLDEFQSALSHTQANVSLPST----IDAKMVYELLKNMRDEDCELLY 2980
            L IIH+R  +  + L EF SA++HT+ + +  +     ++   V  L K M D DCE+LY
Sbjct: 188  LGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLY 246

Query: 2979 LNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES 2800
            L++RPEKL++T+I VPP AIRPSV +DG  QSNENDITERLK IIQ NA L+ E+ E  S
Sbjct: 247  LSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRIIQTNASLQQELVEANS 305

Query: 2799 Q-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRV 2623
              + L+ WE L+ EVAQYINS+ RG+  + Q  +RPLSGF+QRLKGKQGRFRGNLSGKRV
Sbjct: 306  AFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLSGFVQRLKGKQGRFRGNLSGKRV 364

Query: 2622 EFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFI 2443
            E+TGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQ ++NGP KYPGA+ I
Sbjct: 365  EYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMI 424

Query: 2442 KTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMP 2263
            + PDG    L  + R   A +L+ GCIV RHLEDGDVVLFNRQPSLHRMSIM HRARIMP
Sbjct: 425  RYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 484

Query: 2262 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 2083
            WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVAST
Sbjct: 485  WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 544

Query: 2082 QDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLL 1903
            QDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DLPTPA++KPVELWTGKQLFSVL+
Sbjct: 545  QDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLI 604

Query: 1902 RPHAKMRVYLNLTVAEKSYMKSK-----------ETMCPKDGFVYIRNSELISGQLGKAT 1756
            RPHA MRVY+NLTV EK+Y               ETMCP DGFVY RNSELISGQLGKAT
Sbjct: 605  RPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKAT 664

Query: 1755 LGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKK 1576
            LGNGNKDG+YSVLLRDYG HA + CMNRLAKLSARWIGNHGFSIGI+DVQP   L+ +K 
Sbjct: 665  LGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKG 724

Query: 1575 VTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWR 1396
              I   Y  C   I+ Y  G L+L PGCD+A+TLE+ I++ LN IRE     CM +L WR
Sbjct: 725  KLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWR 784

Query: 1395 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFV 1216
            NSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDR+LPHF + AK+P AKGFV
Sbjct: 785  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFV 844

Query: 1215 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNAS 1036
             NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YDN+VRNA 
Sbjct: 845  ANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAG 904

Query: 1035 ACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETI 856
             CIVQF+YG D MDPA ME K+G PLNF+RL MK KATCP   Q++L+  ++ EIV + +
Sbjct: 905  GCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQL 964

Query: 855  ESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEH 676
                                   A  KE C +AF  SL+ F E +    + ++K  ++  
Sbjct: 965  A----------------------AYGKESCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIG 1002

Query: 675  SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 496
             ++    LE V    SGIT+ QL VF++TC SRY  K+               GEPGTQM
Sbjct: 1003 WDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQM 1062

Query: 495  TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXX 316
            TLKTFHFAGVASMN+T GVPR            TP+ITA L                   
Sbjct: 1063 TLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNEN------------ 1110

Query: 315  XXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 136
                      AAR+VKGRIE+TLL QVAKSIK   TSR ASI++ LD + I  A L I A
Sbjct: 1111 ----------AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINA 1160

Query: 135  SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
              VKESI++TPK+KL+ QHI +LD  KLE+F  PP  +SK  FE
Sbjct: 1161 DIVKESIVQTPKIKLKQQHIKVLDFRKLEIF--PPVDKSKIHFE 1202


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1500 bits (3883), Expect = 0.0
 Identities = 788/1237 (63%), Positives = 920/1237 (74%), Gaps = 21/1237 (1%)
 Frame = -1

Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493
            FTKQPYIEDVGPRKI+S+QF+T SG +I KL+EVQVY+G YYD  RKP+ GGLLDP MGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313
             NK  KC TC ANF +CPGH G++ LALPVFNVGY  TI+ I+KCICK CSRILL+EK  
Sbjct: 71   ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130

Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139
            +DFLR+MRNPKLE L+K D++K I+ KC+++  GNK +  CSRCGY+NG VK+    L I
Sbjct: 131  KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNK-STRCSRCGYLNGSVKKAVSMLGI 189

Query: 3138 IHERKNIANNGLDEFQSALSHTQANVSLPSTIDAKMVYELLKNMRDEDCELLYLNDRPEK 2959
            +H R    + G+        +  +N      ++   V  L + M DEDCELL+L++RPEK
Sbjct: 190  LHYRARSKDAGVVSEDLRAPYNVSN----DILNPFRVLCLFQRMSDEDCELLFLSNRPEK 245

Query: 2958 LMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-RFLSN 2782
            L++T++LVPP AIRPSV +DG  QSNENDITERLK IIQ NA +  E++ + SQ + L +
Sbjct: 246  LIITNVLVPPIAIRPSVIMDGS-QSNENDITERLKRIIQQNASVSQELSTSNSQAKCLES 304

Query: 2781 WELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTV 2602
            W++L+ EVAQ INS+ RG+  + Q  S+PL+GF+QRLKGKQGRFRGNL GKRVEFTGRTV
Sbjct: 305  WDMLQSEVAQLINSDVRGIPFSMQV-SKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTV 363

Query: 2601 ISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHE 2422
            ISPDPNLKITEVAVPI MARILTYPERV+ HNIEKLRQ V NGP KYPGA+ ++  DG  
Sbjct: 364  ISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSM 423

Query: 2421 ISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 2242
             SL+   RK  AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HR R+MPWRTLRFN
Sbjct: 424  RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFN 483

Query: 2241 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 2062
            ESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSS
Sbjct: 484  ESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS 543

Query: 2061 FLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMR 1882
            FLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPALVKP+ELWTGKQLFSVL+RPHA M+
Sbjct: 544  FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMK 603

Query: 1881 VYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSV 1720
            VYLNLTV EKSY K K      ETMCP DGFVY RNSELISGQ+GKATLGNGNKDG+YSV
Sbjct: 604  VYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSV 663

Query: 1719 LLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTD 1540
            LLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPGD L K+K+ TI   Y  C  
Sbjct: 664  LLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDK 723

Query: 1539 YIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSK 1360
             I  + +G+L    GCD+A++LESKI++ LN IREATANVCM+NL+WRNSPLIMSQCGSK
Sbjct: 724  QINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSK 783

Query: 1359 GSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATE 1180
            GSPINI QM+ACVGQQSVGGRRAP+GFIDR+LPHF + AK P AKGFV NSFY+GL+ATE
Sbjct: 784  GSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATE 843

Query: 1179 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDA 1000
            FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD++VRNA  CIVQF YG D 
Sbjct: 844  FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDG 903

Query: 999  MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFE 820
            MDPAQME K+G PLNFERLF+KAKATCP+   K L+  E     +ET+E +L K      
Sbjct: 904  MDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEF----SETVEDRLSKD----- 954

Query: 819  GGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEE---------HS 673
                      DA  + GC  AF GSLK F+ K  +    +    L   E          S
Sbjct: 955  ----------DASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSS 1004

Query: 672  EEDRYHLEN-VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 496
            + D   + N V  NI+G+T  QL VFL TC+SRY +KK               GEPGTQM
Sbjct: 1005 DNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQM 1064

Query: 495  TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXX 316
            TLKTFHFAGVASMNVTLGVPR            TP++TA L                   
Sbjct: 1065 TLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVN------------ 1112

Query: 315  XXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 136
                       AR+VK RIE+T L Q+AK I+   +SRSA I + LD ++I  A+L + A
Sbjct: 1113 ----------IARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDA 1162

Query: 135  SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDK 25
            + VK++IL TPK+KL+ +HIN+LDD KL V     D+
Sbjct: 1163 NVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADR 1199


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score = 1446 bits (3742), Expect = 0.0
 Identities = 769/1259 (61%), Positives = 901/1259 (71%), Gaps = 33/1259 (2%)
 Frame = -1

Query: 3681 TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 3502
            ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY   R P+ GGLLDP 
Sbjct: 11   SIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGLLDPR 70

Query: 3501 M---------------GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVI 3367
            M               GP NKS  C TC   F+NCPGH G+LTLALPV+NVGY+ TI+ I
Sbjct: 71   MEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDI 130

Query: 3366 MKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECS 3187
            +KCICK CSR+LL+EK  +D+L++MRNPK+E L+K D++K+IV KC++M     KAV+C 
Sbjct: 131  LKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCP 187

Query: 3186 RCGYVNGMVKRQQ--LKIIHERKNIANNGLDEFQSALSHTQANVSLPST----IDAKMVY 3025
            RCGY+NGMVK+    L IIH+R  +  + L EF SA++HT+ + +  +     ++   V 
Sbjct: 188  RCGYINGMVKKAVAVLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVL 246

Query: 3024 ELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFII 2845
             L K M D DCE+LYL++RPEKL++T+I VPP AIRPSV +DG  QSNENDITERLK II
Sbjct: 247  FLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRII 305

Query: 2844 QANACLRSEMAETESQ-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLK 2668
            Q NA L+ E+ E  S  + L+ WE L+ EVAQYINS+ RG+  + Q  +RPLSGF+QRLK
Sbjct: 306  QTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLSGFVQRLK 364

Query: 2667 GKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQ 2488
            GKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQ
Sbjct: 365  GKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQ 424

Query: 2487 YVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPS 2308
             ++NGP KYPGA+ I+ PDG    L  + R   A +L+ GCIV RHLEDGDVVLFNRQPS
Sbjct: 425  CIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPS 484

Query: 2307 LHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQN 2128
            LHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQN
Sbjct: 485  LHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQN 544

Query: 2127 NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVK 1948
            NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DLPTPA++K
Sbjct: 545  NLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILK 604

Query: 1947 PVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMKSK-----------ETMCPKDGFVY 1801
            PVELWTGKQLFSVL+RPHA MRVY+NLTV EK+Y               ETMCP DGFVY
Sbjct: 605  PVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVY 664

Query: 1800 IRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIG 1621
             RNSELISGQLGKATLG                      CMNRLAKLSARWIGNHGFSIG
Sbjct: 665  FRNSELISGQLGKATLG----------------------CMNRLAKLSARWIGNHGFSIG 702

Query: 1620 INDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNI 1441
            I+DVQP   L+ +K   I   Y  C   I+ Y  G L+L PGCD+A+TLE+ I++ LN I
Sbjct: 703  IDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRI 762

Query: 1440 REATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLP 1261
            RE     CM +L WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDR+LP
Sbjct: 763  REDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLP 822

Query: 1260 HFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKAL 1081
            HF + AK+P AKGFV NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKAL
Sbjct: 823  HFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKAL 882

Query: 1080 EDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQK 901
            EDLSI YDN+VRNA  CIVQF+YG D MDPA ME K+G PLNF+RL MK KATCP   Q+
Sbjct: 883  EDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQR 942

Query: 900  FLTTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKK 721
            +L+  ++ EIV + +                       A  KE C +AF  SL+ F E +
Sbjct: 943  YLSPQQVSEIVEKQLA----------------------AYGKESCSEAFLNSLRKFFEGQ 980

Query: 720  CPSSNLRLKLTKEEHSEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXX 541
                + ++K  ++   ++    LE V    SGIT+ QL VF++TC SRY  K+       
Sbjct: 981  QDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAI 1040

Query: 540  XXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXX 361
                    GEPGTQMTLKTFHFAGVASMN+T GVPR            TP+ITA L    
Sbjct: 1041 GAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECND 1100

Query: 360  XXXXXXXXXXXXXXXXXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVT 181
                                     AAR+VKGRIE+TLL QVAKSIK   TSR ASI++ 
Sbjct: 1101 NEN----------------------AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIA 1138

Query: 180  LDKDRIDGAQLSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            LD + I  A L I A  VKESI++TPK+KL+ QHI +LD  KLE+F  PP  +SK  FE
Sbjct: 1139 LDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIF--PPVDKSKIHFE 1195


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score = 1444 bits (3738), Expect = 0.0
 Identities = 764/1250 (61%), Positives = 906/1250 (72%), Gaps = 27/1250 (2%)
 Frame = -1

Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493
            +TKQPYIEDVGPR+I+SIQFST+SG+DI K SE QV+ G+YYD  +K + GGLLD  MG 
Sbjct: 10   YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69

Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313
            PNK G C+TC  +FT+CPGH G+L L LPV+NVGY+ TI+ I+KCICK CSR+L+ EK R
Sbjct: 70   PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129

Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139
            + +L+RMRNP+ E LKKN+++K IV KC+SM   + KAV+C RCGY+NGMVK+    + I
Sbjct: 130  KSYLKRMRNPRTEPLKKNELMKEIVKKCSSMA--SSKAVKCLRCGYMNGMVKKAGSVVGI 187

Query: 3138 IHERKNIANNGLDEFQSALSHTQ---ANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 2971
            IH+R  + +  L+E +SA+ HT+   A + L + I +   V  L + M +EDCELLYL  
Sbjct: 188  IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247

Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-- 2797
            RPEKL++T+I VPP +IRPSVF +G  QSNENDITERLK IIQ NA LR E+ E      
Sbjct: 248  RPEKLIITTIAVPPISIRPSVFTEGS-QSNENDITERLKQIIQFNAKLRLELLEGRRTGI 306

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            ++L  W+ L+  V  YINS+ R          RPLSGF+QRL GKQGRFR NL+GKRVEF
Sbjct: 307  KYLIGWDELQAVVTLYINSDVR--IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEF 364

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ V NG  KYPGA+ +  
Sbjct: 365  TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTY 424

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG    L    RK  A++L+ GCIVHRHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 425  PDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 484

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEILVASTQD
Sbjct: 485  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQD 544

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKDTFYDR+AFSLMCSY+ D MD +DLPTP+++KP+ELWTGKQLFSVLLRP
Sbjct: 545  FLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRP 604

Query: 1896 HAKMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNK 1738
            HA +RVY+NL + EK+Y        K +ETMCP DG+VY RNSELISGQLGKATLGNGNK
Sbjct: 605  HANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNK 664

Query: 1737 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 1558
            DG+YS+LLRDY  +AAATCMNRLAKLSARWIGNHGFSIGI+DVQPG  L  EK  TI   
Sbjct: 665  DGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNG 724

Query: 1557 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 1378
            Y HC   I  Y  G L L  GCD+ +TLE++I+E LN +RE   +VCMK L+WRNSPLIM
Sbjct: 725  YRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIM 784

Query: 1377 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 1198
            SQCGSKGSPINI QMIACVGQQSVGG RAP+GFIDR+LPHF + +K P AKGFV NSFY+
Sbjct: 785  SQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYS 844

Query: 1197 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 1018
            GLSATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + YDNTV++A   IVQF
Sbjct: 845  GLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQF 904

Query: 1017 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFK 838
            +YG D +DPA ME K G+PLNF+RLFMK KATC A + ++L+  +I  IV    +S L K
Sbjct: 905  LYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIV----QSLLLK 960

Query: 837  SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKL---TKEEHSEE 667
             + T +G                C ++F  SL  F+  +       +KL    + E+ E 
Sbjct: 961  HNGTLDG---------------ICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFEN 1005

Query: 666  DR---------YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXG 514
             +          + E +A  +SGIT+ QL VFL+TC+ RY  K+               G
Sbjct: 1006 IKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIG 1065

Query: 513  EPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXX 334
            EPGTQMTLKTFHFAGVASMN+T GVPR            TP+IT  L             
Sbjct: 1066 EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVN------ 1119

Query: 333  XXXXXXXXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGA 154
                            AAR++KGRI++T+L QVAKSIK   TSRSAS+ VTLD   I  A
Sbjct: 1120 ----------------AARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREA 1163

Query: 153  QLSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            QLS+ A+ V+E IL TPK+K + Q IN+L+D KLEVF  P   R+K  FE
Sbjct: 1164 QLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVF--PGGDRNKLHFE 1211


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score = 1428 bits (3696), Expect = 0.0
 Identities = 760/1240 (61%), Positives = 900/1240 (72%), Gaps = 17/1240 (1%)
 Frame = -1

Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493
            FTK+P++ED GPRKI++++FSTLS ++I K++EVQV++G YYD  +KP+ GGLLDP MGP
Sbjct: 11   FTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70

Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313
             NKS  C TC  NF +CPGH G+L LALPVFNVGY+ TIV I+KCICK C+RILL E  R
Sbjct: 71   ANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTR 130

Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139
            +  L++MR+ K   L K D +K  V K  S      K V C RCGY+NG VK+    L I
Sbjct: 131  KKHLKKMRSSKKSELDKIDFVKVRVIKDCS------KVVNCPRCGYINGSVKKLPASLTI 184

Query: 3138 IHERKNIANNGLDEFQSALSH---TQANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 2971
            IH+     N  ++E  SALS    ++A  ++ + I +   V  L K M DEDCELLY+ +
Sbjct: 185  IHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAE 244

Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-TESQR 2794
            RPEKL++T+++VPP AIRPSV +D    SNENDITERLK IIQANA LR E+ E T S +
Sbjct: 245  RPEKLIMTNVVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESTFSSK 303

Query: 2793 FLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFT 2614
            FL  W++L++EVAQ+INS+ RG+    Q  ++ L+GF+QRLKGK GRFRGNLSGKRVE+T
Sbjct: 304  FLDGWDILQNEVAQFINSDVRGIPFYMQP-TKQLAGFVQRLKGKHGRFRGNLSGKRVEYT 362

Query: 2613 GRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTP 2434
            GRTVISPDPNLKI+EVA+PI MARILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++  
Sbjct: 363  GRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRD 422

Query: 2433 DGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRT 2254
             GH  SL    RK  AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 423  GGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 482

Query: 2253 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 2074
            LRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNGEILVASTQDF
Sbjct: 483  LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDF 542

Query: 2073 LTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPH 1894
            LTSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA+VKPVELW+GKQLFS++LRPH
Sbjct: 543  LTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPH 602

Query: 1893 AKMRVYLNLTVAEKSYMKSK---------ETMCPKDGFVYIRNSELISGQLGKATLGNGN 1741
            A MRVY+NLTV E++Y + K         +T+CP DGFVY RNSELISGQ+GK TLGNGN
Sbjct: 603  ANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGNGN 662

Query: 1740 KDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDM 1561
            KDG++SVLLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L  +K  TI  
Sbjct: 663  KDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISE 722

Query: 1560 EYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLI 1381
             Y  C  +I  +  G LEL  GCD+A+TLE++I+  LN +R+    VCM+ L+WRNSPLI
Sbjct: 723  GYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSPLI 782

Query: 1380 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFY 1201
            MSQCGSKGS INI QM+ACVGQQSVGGRR PNGFIDR+LPHF + +K P AKGFV NSFY
Sbjct: 783  MSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFY 842

Query: 1200 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQ 1021
            +GLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K+LEDL + YD TVRNA   IVQ
Sbjct: 843  SGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQ 902

Query: 1020 FVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCP-AMDQKFLTTDEIKEIVTETIESKL 844
            F YG D MDPA ME K G PLNFERLF+K+KA CP   D + L++ ++ ++V E +    
Sbjct: 903  FCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSE-- 960

Query: 843  FKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEED 664
            F  S   E G  E     D          F  SL+ FI+          KLT+E  ++E 
Sbjct: 961  FDMSRLAEKGVFEVGFSAD----------FVESLQSFIKDNA-------KLTEEGFTDEH 1003

Query: 663  RYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKT 484
              +L+     ISGIT+ QL VFL  C+SRY SKK               GEPGTQMTLKT
Sbjct: 1004 SQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKT 1063

Query: 483  FHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXX 304
            FHFAGVASMNVTLGVPR            TP+ITA+L                       
Sbjct: 1064 FHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNAN---------------- 1107

Query: 303  XXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVK 124
                   AR+VKGRIE+T L QVAKSIK   TSRSAS+++TLD  RI  A L+I A+ VK
Sbjct: 1108 ------TARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVK 1161

Query: 123  ESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            ESILRT K KL+ +HI ILD  KLEV     D RSK  F+
Sbjct: 1162 ESILRTKKTKLKPEHIKILDIKKLEVVPQDVD-RSKIHFQ 1200


>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
            gi|561005141|gb|ESW04135.1| hypothetical protein
            PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score = 1420 bits (3677), Expect = 0.0
 Identities = 753/1238 (60%), Positives = 900/1238 (72%), Gaps = 15/1238 (1%)
 Frame = -1

Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493
            FTK+P++ED GPRKI++++FS LS ++I KL EVQV++G YYD  +KP+ GGLLDP MGP
Sbjct: 11   FTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70

Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313
             NKS  C TC  NF +CPGH G+L LALPVFNVGY+G+IV I+KCICK C+RILL E  R
Sbjct: 71   ANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDEDTR 130

Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKI 3139
            +  L++MR+ K   L K D +K  + K  S      K V C RCGY+NG VK+    L I
Sbjct: 131  KKHLKKMRSSKKSELDKMDFVKVRIIKDCS------KVVNCPRCGYINGSVKKLPASLII 184

Query: 3138 IHERKNIANNGLDEFQSALSHTQ-----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2974
            +H+     NN ++E +S LS  +     ANVS    ++   V  L + M DEDCELLY+ 
Sbjct: 185  MHDCSKCKNNIVEELESTLSRIKDSKATANVS-NRILNPFQVLSLFRKMLDEDCELLYVA 243

Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE-SQ 2797
            +RPEKL++T+I+VPP AIRPSV +D    SNENDITERLK IIQANA LR E+ E+  S 
Sbjct: 244  ERPEKLIITNIVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESSVSS 302

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            +FL  WE+L++EVAQ+INSE RG+    QS ++ L+GF+QRLKGK GRFRGNLSGKRVE+
Sbjct: 303  KFLDGWEILQNEVAQFINSEVRGIPFYMQS-TKQLAGFVQRLKGKHGRFRGNLSGKRVEY 361

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKI+EVA+PILMA ILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++ 
Sbjct: 362  TGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRR 421

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
              GH  SL    RK  AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 422  DGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 481

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQD
Sbjct: 482  TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQD 541

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFL+TRKDTFYDRSAF+ +C+++GD +D IDLPTPA+VKPVELW+GKQLFS+LLRP
Sbjct: 542  FLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLRP 601

Query: 1896 HAKMRVYLNLTVAEKSYMK------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 1735
            HA  +VY+NLTV EK+Y K        +T+CP DGFVY RN+ELISGQ+GK TLGNGNKD
Sbjct: 602  HANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNKD 661

Query: 1734 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 1555
            G++SVLLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L K+K  T+   Y
Sbjct: 662  GLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEGY 721

Query: 1554 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 1375
              C ++I+ +  G LEL  GCD+ +TLE++I+  LN +R+    VCM+ L+WRNSPLIMS
Sbjct: 722  KKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIMS 781

Query: 1374 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 1195
            QCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF   AK P AKGFV NSFY+G
Sbjct: 782  QCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSG 841

Query: 1194 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 1015
            LSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K++EDL + YD TVRNA   IVQF 
Sbjct: 842  LSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFC 901

Query: 1014 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAM-DQKFLTTDEIKEIVTETIESKLFK 838
            YG D MDP  ME K G PLNFERLF+K+KA CP   D + L++ ++ ++V E +    F 
Sbjct: 902  YGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSE--FG 959

Query: 837  SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRY 658
             S   E G  E     D          F  SL+ FI+          KLT+E  ++++  
Sbjct: 960  VSREVEKGVLEVGFSAD----------FVQSLQSFIKD-------NTKLTEETFTDDNSQ 1002

Query: 657  HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 478
             L+     ISGIT+ QL VFL  C+SRY SKK               GEPGTQMTLKTFH
Sbjct: 1003 ILKKFGERISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFH 1062

Query: 477  FAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXX 298
            FAGVASMNVTLGVPR            TP+ITA+L                         
Sbjct: 1063 FAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERTDCAN------------------ 1104

Query: 297  XXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKES 118
                 AR+VKGRIE+T L QVAKSIK   TSR AS+++TLD +RI  A L+I A+ VKES
Sbjct: 1105 ----TARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITLDMERIQDAHLNIDANIVKES 1160

Query: 117  ILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            IL+T K KL+ +HI ILD  KL V     D RSK  F+
Sbjct: 1161 ILQTKKAKLKPEHIKILDVKKLRVVPQDGD-RSKLHFQ 1197


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Cicer arietinum]
          Length = 1399

 Score = 1413 bits (3658), Expect = 0.0
 Identities = 740/1224 (60%), Positives = 897/1224 (73%), Gaps = 14/1224 (1%)
 Frame = -1

Query: 3672 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 3493
            FTK+P+IED+GPRKI  I +STLS  +I K+ EVQV++G YYD  RKP   GLLD  MGP
Sbjct: 11   FTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEADGLLDSRMGP 70

Query: 3492 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 3313
             NKS  C TC  NF +C GH G+L L  PVFNVGY+ T+V I+KCICK C+ ILL E  R
Sbjct: 71   ANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGCAGILLDEDTR 130

Query: 3312 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVK--RQQLKI 3139
            + +L++MRN KL+ L+K  +L++I+ +  S      K ++C RCGY+NG+VK  R  L+I
Sbjct: 131  KKYLKKMRNSKLDELQKIQLLESIMKRFRSA-----KFIKCQRCGYINGIVKLTRSTLRI 185

Query: 3138 IHERKNIANNGLDEFQSALSHTQ----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLND 2971
            +H+  +  N+ + E QSALSH +     N      +D K V+ L   M DEDC LLYL +
Sbjct: 186  VHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALLYLAE 245

Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQRF 2791
            RPEKL++T+I VPP  IRPSV +DG  QSNENDITE+L+ IIQANA L  E+ E  S +F
Sbjct: 246  RPEKLIITNIAVPPIVIRPSVIMDGS-QSNENDITEKLRKIIQANAALHKELEE--STKF 302

Query: 2790 LSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTG 2611
               +E+L+  VAQYINS+ +G   + Q+ S+PL+GF+QR+KGKQGRFR NLSGKRVE+TG
Sbjct: 303  QGGFEMLQFLVAQYINSDVKGGPYSMQA-SKPLTGFVQRIKGKQGRFRSNLSGKRVEYTG 361

Query: 2610 RTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPD 2431
            RTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ +RNGP KYPGAK ++   
Sbjct: 362  RTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAG 421

Query: 2430 GHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTL 2251
            G   +L    RK  AD+LR+G IV RHLEDGDVVLFNRQPSLHRMS+M HRARIMPWRTL
Sbjct: 422  GTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTL 481

Query: 2250 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 2071
            RFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFL
Sbjct: 482  RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFL 541

Query: 2070 TSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHA 1891
            TSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA++KPVELW+GKQLFS+LLRPHA
Sbjct: 542  TSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHA 601

Query: 1890 KMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDG 1732
             +RVY+NLTV EK++        +  +TMCP DGFVY RNSELISGQLGK TLGNGNKDG
Sbjct: 602  NVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNGNKDG 661

Query: 1731 IYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYG 1552
            ++SVLLRDY  HAAA+CMNRLAK SARWIGNHGFSIGI+DVQP + L   KK TI   Y 
Sbjct: 662  LFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETITTGYS 721

Query: 1551 HCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQ 1372
             C  +I  +  G LEL+PGCD+A+TLE+KI + LN++R+ TA VCM+ L+WRNSPLIMSQ
Sbjct: 722  ECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPLIMSQ 781

Query: 1371 CGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGL 1192
            CGSKGSPINICQM+ACVGQQSVGG RA NGF+DR+LPHF K AK P  KGFV NSF+TGL
Sbjct: 782  CGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSFFTGL 841

Query: 1191 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVY 1012
            SATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL + YD TVR+ +  IVQF Y
Sbjct: 842  SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQFCY 901

Query: 1011 GGDAMDPAQMEEKTGLPLNFERLFMKAKATCPA-MDQKFLTTDEIKEIVTETIESKLFKS 835
            G D MDP+ ME K G PLNF+RLF+K+KA CP+  D   L++ ++ E++ + +      S
Sbjct: 902  GDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIRKKL------S 955

Query: 834  SVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYH 655
             V       + ++  D  S  G    F  SL+ F++      N +L     E+  ++  +
Sbjct: 956  EVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVK-----DNTKLTEAIAENDSKNLTN 1010

Query: 654  LENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHF 475
            L+N    ISGI++ QL VFL  C+SRY+ KK               GEPGTQMTLKTFHF
Sbjct: 1011 LKNFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHF 1070

Query: 474  AGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXX 295
            AGVASMNVTLGVPR           KTP++TA+L                          
Sbjct: 1071 AGVASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNAN------------------- 1111

Query: 294  XDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESI 115
                AR+VKGRIE+T L QVAKSIK   TSRSA+++++LD +RI  A L+I A +VKESI
Sbjct: 1112 ---TARMVKGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESI 1168

Query: 114  LRTPKMKLQAQHINILDDHKLEVF 43
            LRT K+KL+A+++ +LD  KL+V+
Sbjct: 1169 LRTAKLKLKAENVKVLDIKKLQVY 1192


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score = 1406 bits (3639), Expect = 0.0
 Identities = 754/1231 (61%), Positives = 892/1231 (72%), Gaps = 30/1231 (2%)
 Frame = -1

Query: 3606 LSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGPPNK-SGKCETCAANFTNCPGHC 3430
            +SG +I K +E QV+ G YYD  RKP+  GLLDP +GP  K S  CETC A+F  CPGH 
Sbjct: 2    MSGAEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHF 61

Query: 3429 GHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDIL 3250
            G+L L LPVFNVGY+  I+ I+KCICK CSRIL  EK  +  L++MRNP++EHL+K++++
Sbjct: 62   GYLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELV 121

Query: 3249 KAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQLKIIHERKNIANNGLDEFQSALSH 3076
            K IV KC+SM   + KAV+C+RCG +NGMVK+    L IIH+R  + +  L+E +SA++H
Sbjct: 122  KKIVKKCSSMT--SNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAH 179

Query: 3075 TQ---ANVSLPSTIDAKM-VYELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSV 2908
            T+   A +SL + I   + V  L K + +EDCE+L L DRPEKL++T+I VPP +IRPSV
Sbjct: 180  TKESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSV 239

Query: 2907 FVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ--RFLSNWELLRDEVAQYINSEA 2734
            F DG  QSNENDITERLK IIQANA LR E+ E      ++L +W+ L+  VA Y+NS+ 
Sbjct: 240  FTDGL-QSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDV 298

Query: 2733 RGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPI 2554
            R + NN +   +PLSGF+QRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVA+PI
Sbjct: 299  R-VPNNVEVG-KPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPI 356

Query: 2553 LMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLR 2374
             MARIL+YPERVSHHNIEKLRQ V NGPQKYPGA  ++ PDG    L+   RK  A++L 
Sbjct: 357  HMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELT 416

Query: 2373 YGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEM 2194
            +GCIV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEM
Sbjct: 417  FGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEM 476

Query: 2193 NMHVPQTEEARTEALMLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAF 2017
            NMHVPQTEEARTEAL+LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDR+AF
Sbjct: 477  NMHVPQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAF 536

Query: 2016 SLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMK- 1840
            SLMCSY+ D MD IDLPTPA++KP+ELWTGKQLFSVLLRP+A +RVY+NL V EK Y K 
Sbjct: 537  SLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKP 596

Query: 1839 ------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCM 1678
                   KETMCP DGFVYIRNSELISGQLGKATLGNGNKDG+YS+LLRDY PHAAATCM
Sbjct: 597  KKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCM 656

Query: 1677 NRLAKLS--ARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLEL 1504
            NRLAKL   ARWIGNHGFSIGI+DVQPG  L   K  TI   Y  C   I +Y  G L L
Sbjct: 657  NRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLL 716

Query: 1503 SPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIAC 1324
             PGCD+ +TLES+I+E LN +RE   +VCMK L+WRNSPLIMSQCGSKGS INI QM+AC
Sbjct: 717  KPGCDATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVAC 776

Query: 1323 VGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGL 1144
            VGQQSVGGRRAP+GFIDR+LPHF + +K P AKGFV NSFY+GL ATEFFFHTM GREGL
Sbjct: 777  VGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGL 836

Query: 1143 VDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGL 964
            VDTAVKTADTGYMSRRLIK LEDLSI YDNTVRNAS CIVQF+YG D +DPA ME K G+
Sbjct: 837  VDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGV 896

Query: 963  PLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDA 784
            PLN +RLF K KATCP  ++ +L+  +I ++V    E+ L K  +   G           
Sbjct: 897  PLNLDRLFSKVKATCPVREEDYLSPLDISDVV----ENLLLKHDMALGG----------- 941

Query: 783  PSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTK--EEHSEE---------DRYHLENVAS 637
                 C +AF  SL  F+          +KL    E+ + E         +   +E +A 
Sbjct: 942  ----ICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAH 997

Query: 636  NISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASM 457
             I G+++ Q+ VF++TCI+RY  K+               GEPGTQMTLKTFHFAGVASM
Sbjct: 998  KIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1057

Query: 456  NVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAR 277
            N+T GVPR            TP+ITA L                             AAR
Sbjct: 1058 NITQGVPRIKEIINGAKKISTPIITAEL----------------------EQNTNVTAAR 1095

Query: 276  LVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKM 97
            + KGRI++T+L QVAKSIK   TSRSAS+++TLD   I  AQLS+ A+ VKE+ILRTP++
Sbjct: 1096 IAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRI 1155

Query: 96   KLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            KL+ QHI +LD  KLEV   P   R +  FE
Sbjct: 1156 KLKPQHIKVLDTRKLEVI--PLGDRERVHFE 1184


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score = 1396 bits (3613), Expect = 0.0
 Identities = 708/1035 (68%), Positives = 824/1035 (79%), Gaps = 11/1035 (1%)
 Frame = -1

Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499
            +QFTK+PYIEDVGPRKIESI+F+  S ++I K +EVQV++G YYD  RKP+  GLLDP M
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319
            GP NK+G C TC  NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQL 3145
              +D+L++MR+ K+E LKK +++K IV KC +M   +KKAV+CSRCGY+NG+VK+    L
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183

Query: 3144 KIIHERKNIANNGLDEFQSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2974
             IIH+R  IA+  L+E  SA+SHT+   A+ S+   ++   V  L K M DEDC+LL L 
Sbjct: 184  GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 2973 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 2797
            +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L  E+ +T S  
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            + L+ W+ L+ EVAQYINS+ RG+    Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG   SL++  RK  AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++K +ELWTGKQLF+VLLRP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRP 602

Query: 1896 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 1723
            HA +RVYLNLTV EK+Y K   KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S
Sbjct: 603  HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662

Query: 1722 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 1543
            VLLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG  LN +K   I+  Y +C 
Sbjct: 663  VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722

Query: 1542 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 1363
            + I++Y  G L+L PGC++A+TLE++I+  LN IRE TANVCM+ L+WRNSPLIMSQCGS
Sbjct: 723  ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782

Query: 1362 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 1183
            KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT
Sbjct: 783  KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842

Query: 1182 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 1003
            EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+  IVQF+YG D
Sbjct: 843  EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902

Query: 1002 AMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTF 823
             MDPA+ME K G PLNF RLF+K KATCPA +   L+  +I+E V    E          
Sbjct: 903  GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHN-------- 954

Query: 822  EGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEHSEEDRYHL 652
                          S EGC  AF  +L  F+E   +K  ++   L L  E   EE+    
Sbjct: 955  -------------TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQ 1001

Query: 651  ENVASNISGITKGQL 607
            E  A NISGIT  QL
Sbjct: 1002 EKFAKNISGITSKQL 1016



 Score =  151 bits (382), Expect = 2e-33
 Identities = 102/229 (44%), Positives = 126/229 (55%), Gaps = 1/229 (0%)
 Frame = -1

Query: 687  KEEHSEEDRYHLENVASNISG-ITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGE 511
            ++   E+  Y L ++ +++    ++ +L VFL TCISRYQ K+               GE
Sbjct: 1425 RQRVKEKINYQLVDMTNDVEEQSSRKRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGE 1484

Query: 510  PGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXX 331
            PGTQMTLKTFHFAGVASMNVTLGVPR            TP+ITA L              
Sbjct: 1485 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVK------- 1537

Query: 330  XXXXXXXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQ 151
                            AR+VKGRIERT L QVAKSIK   TSR A I V LD + I  +Q
Sbjct: 1538 ---------------TARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQ 1582

Query: 150  LSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
            LSI ++ V+ESILR  ++KL+ QHI +LD  KLEV  +P   RS   FE
Sbjct: 1583 LSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEV--HPQGDRSTIHFE 1629


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score = 1395 bits (3610), Expect = 0.0
 Identities = 732/1238 (59%), Positives = 889/1238 (71%), Gaps = 18/1238 (1%)
 Frame = -1

Query: 3681 TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 3502
            T+ FTK+P+IE+ G  +I   QF+ +S ++I K++  Q++ G+YYD  +KP+ GGLLD  
Sbjct: 9    TIAFTKEPFIEEEGHCRIAQWQFNAMSQSEISKMAATQIFLGRYYDSNQKPIRGGLLDAR 68

Query: 3501 MGPPNKS-GKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLK 3325
            +GP NK  G CETC A  ++CPGH G+L LA+PVFNVGY+ T+V ++KCICK CSRI+L 
Sbjct: 69   LGPANKQCGDCETCGAKLSDCPGHFGYLVLAVPVFNVGYLSTVVDVLKCICKSCSRIILD 128

Query: 3324 EKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKRQQ- 3148
            +K R  FL  +R+PK +   K+  +K IV KC SM   N ++V+C +CGY+NG VKR Q 
Sbjct: 129  DKSRSRFLNVVRDPKKD---KSVTMKLIVKKCTSM-SSNNRSVKCPKCGYMNGSVKRAQG 184

Query: 3147 -LKIIHERKNIANNGLDEFQSA---LSHTQANVSL-PSTIDAKMVYELLKNMRDEDCELL 2983
             L I+H         +D+F+S    +   +A+++L P  ++   V+ L K M DEDCELL
Sbjct: 185  MLAIVH-------GAVDDFKSVNPVMKDPKASINLQPHMLNPVKVFSLFKRMLDEDCELL 237

Query: 2982 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE 2803
             L  RPE L++T+I VPP AIRPSV VDG  QSNENDITERLK IIQ NAC++ +++E  
Sbjct: 238  NLKSRPENLIMTTIAVPPIAIRPSVLVDGS-QSNENDITERLKKIIQTNACVQQDLSEGS 296

Query: 2802 SQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRV 2623
            + RFLSNWE+L+ EVA YINS+ RG+  +  +N++PL+G +QRLKGK GRFRGNL GKRV
Sbjct: 297  TTRFLSNWEILQAEVALYINSDVRGVPYHMTANAKPLNGLVQRLKGKTGRFRGNLCGKRV 356

Query: 2622 EFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFI 2443
            E+TGRTVISPDPNLKITEV +PI MA+IL+YPERVS HNIEKLR+ V NGP KYPGA  +
Sbjct: 357  EYTGRTVISPDPNLKITEVGIPIQMAQILSYPERVSDHNIEKLRRCVANGPFKYPGALVL 416

Query: 2442 KTPDGHEISL-VYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 2266
            K  +G E SL   + R  HAD L+ G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIM
Sbjct: 417  KCQNGEEWSLKAGQKRMSHADNLKPGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIM 476

Query: 2265 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2086
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+MLMGVQNNLCTPKNGEILVAS
Sbjct: 477  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEILVAS 536

Query: 2085 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 1906
            TQDFLTSSFLITRKDTFYDR++FSLMCSY+GD  + +DLPTPA+VKP+ELWTGKQL+SVL
Sbjct: 537  TQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTEHVDLPTPAVVKPIELWTGKQLYSVL 596

Query: 1905 LRPHAKMRVYLNLTVAEKSYMKSK-------ETMCPKDGFVYIRNSELISGQLGKATLGN 1747
            +RP++ +RVYLNLTV EKSY   K       E MCP DGFVY RNSEL+SGQLGK TLGN
Sbjct: 597  VRPNSNVRVYLNLTVREKSYSNRKTEDGREIEAMCPNDGFVYFRNSELLSGQLGKGTLGN 656

Query: 1746 GNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTI 1567
            GNKDG++SVLLRDY  HAAA+CMNR+AKLSARWIGNHGFSIGI+DVQP D L  EK+  I
Sbjct: 657  GNKDGLFSVLLRDYKAHAAASCMNRVAKLSARWIGNHGFSIGISDVQPSDILYGEKEKII 716

Query: 1566 DMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSP 1387
               Y  C D I+ Y  G L L+PGCD+A++LES I+  LN+IR+ T  +CM+ L+WRNSP
Sbjct: 717  KKGYDKCDDQIKLYKEGQLRLAPGCDAAQSLESGITAVLNDIRDQTGKLCMQTLHWRNSP 776

Query: 1386 LIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNS 1207
            LIMSQCGSKGS INI QM+ACVGQQSVGGRRAPNGFIDR+LPHF +    P AKGFV +S
Sbjct: 777  LIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNTPAAKGFVASS 836

Query: 1206 FYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACI 1027
            FY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD TVR A+  I
Sbjct: 837  FYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKTVRAANGGI 896

Query: 1026 VQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESK 847
            VQF YG D MDPA ME K+G PL+F RLF +AKATCPA + + L+ DE+ EIV     S+
Sbjct: 897  VQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIV----RSR 952

Query: 846  LFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEH 676
            L +  +T +G               GC   F  S++ F++   K    +     L +   
Sbjct: 953  LSEQDMTPDG---------------GCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPG 997

Query: 675  SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQM 496
             E     L+N+  NISG+T  QL VFL TCISRY SKK               GEPGTQM
Sbjct: 998  WEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQM 1057

Query: 495  TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXX 316
            TLKTFHFAGVASMNVTLGVPR            TP+IT VL                   
Sbjct: 1058 TLKTFHFAGVASMNVTLGVPRIKEIINGAKNIHTPIITTVL------------------- 1098

Query: 315  XXXXXXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 136
                     + AR+V GRIE+T L QVA+ I+   + R+A + V LD   I  A LSI A
Sbjct: 1099 ---ECDNNPMIARMVAGRIEKTNLGQVAECIEIVMSPRAAYVEVKLDMAVIQDAHLSIDA 1155

Query: 135  SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKR 22
            + VK+SIL TP++KL+ +HI + D+  +EV  +  D+R
Sbjct: 1156 NVVKQSILGTPRIKLKHEHIRVPDNQTVEVHSHEKDRR 1193


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
            lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
            ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score = 1387 bits (3589), Expect = 0.0
 Identities = 727/1219 (59%), Positives = 872/1219 (71%), Gaps = 14/1219 (1%)
 Frame = -1

Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499
            ++FTKQPYIEDVGP KI+SI FS LS  ++ K +EVQV++  YY+   KP   GLLD  M
Sbjct: 7    IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66

Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319
            GPPNK   C TC  NF NCPGH G+L L LPV+NVG+   I+ I+KCICK+CS +LL EK
Sbjct: 67   GPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEK 126

Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR----Q 3151
              +D LR+MRNPK+E LKK ++ KA+V KC++M   +++ + C +CGY+NGMVK+     
Sbjct: 127  LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA--SQRIITCKKCGYLNGMVKKIAAQM 184

Query: 3150 QLKIIHERKNIANNGLDEFQSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELL 2983
             + I H+R  I    +DE +SA+SHT+ +      L   +D  +V  L K M D+DCELL
Sbjct: 185  GIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELL 244

Query: 2982 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-T 2806
            Y+  RPE L+ T +LVPP +IRPSV + GG +SNENDITERLK IIQ NACL   +++ T
Sbjct: 245  YIAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPT 303

Query: 2805 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 2626
             S + +  W+ ++ EVA+YINSE RG+ N  Q    PLSG +QRLKGKQGRFR NLSGKR
Sbjct: 304  TSPKNMQVWDTVQSEVAKYINSEVRGVQN--QPEKTPLSGLLQRLKGKQGRFRANLSGKR 361

Query: 2625 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 2446
            VE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+ 
Sbjct: 362  VEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARN 421

Query: 2445 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 2266
            ++ PDG   +LV + RK  AD+L  GCIV RHLE+GD VLFNRQPSLHRMSIM HRARIM
Sbjct: 422  VRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIM 481

Query: 2265 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2086
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS
Sbjct: 482  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 541

Query: 2085 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 1906
            TQDFLT+SFLITRKDTFYDR+AFSL+CSY+GD MD+IDLPTP ++KP+ELWTGKQLFSVL
Sbjct: 542  TQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVL 601

Query: 1905 LRPHAKMRVYLNLTVAEKSYMKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGNK 1738
            LRP+A +RVY+ L V EK++ K +    ETMC  DG+VY RNSELISGQLGKATLGNGNK
Sbjct: 602  LRPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGNK 661

Query: 1737 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 1558
            DG+YS+LLRDY  HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG+ LNKE+K +I   
Sbjct: 662  DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFG 721

Query: 1557 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 1378
            Y  C   I  +  G+L+L  G D A++LE++I+  LN IREAT   CM  L+WRNSPLIM
Sbjct: 722  YDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIM 781

Query: 1377 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 1198
            SQCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P AKGFV NSFY+
Sbjct: 782  SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYS 841

Query: 1197 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 1018
            GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF
Sbjct: 842  GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 901

Query: 1017 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMD-QKFLTTDEIKEIVTETIESKLF 841
             YG D MDPA ME K G PLNF+RLF+K +ATCP      +L+++E+    ++  E +L 
Sbjct: 902  TYGDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEEL----SQKFEEELV 957

Query: 840  KSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDR 661
            +        H +S           C  AF  SL++F+      S L +K           
Sbjct: 958  R--------HDKSRV---------CTDAFVKSLREFV------SLLGVKSAS-------- 986

Query: 660  YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTF 481
                 V    SG+T  QL VF++ C+SRY+ KK               GEPGTQMTLKTF
Sbjct: 987  --TPQVLYKASGVTDKQLEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTF 1044

Query: 480  HFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXX 301
            HFAGVASMN+T GVPR            TPVI+A L                        
Sbjct: 1045 HFAGVASMNITQGVPRINEIINASKNISTPVISAEL----------------------EN 1082

Query: 300  XXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKE 121
                 +AR VKGRIE+T L QVA+SI+   TS SAS+ + LD   I+ A LSI   SVK 
Sbjct: 1083 PLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSISPWSVKN 1142

Query: 120  SILRTPKMKLQAQHINILD 64
            SIL+TP++KL    I +LD
Sbjct: 1143 SILKTPRIKLNDNDIRVLD 1161


>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
            gi|557101978|gb|ESQ42341.1| hypothetical protein
            EUTSA_v10012446mg [Eutrema salsugineum]
          Length = 1375

 Score = 1384 bits (3581), Expect = 0.0
 Identities = 729/1218 (59%), Positives = 875/1218 (71%), Gaps = 13/1218 (1%)
 Frame = -1

Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499
            ++FTKQPYIEDVGP KI+SI FS  S  +I K +EVQV++  YY+   KPV GGLLDP M
Sbjct: 7    IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66

Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319
            GPPNK   C TC A+F NCPGH G+L L LPV+NVG++  I+ I+KCICK+CS IL+ EK
Sbjct: 67   GPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEK 126

Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVKR--QQL 3145
              +D L++MRNPK+E LKK ++ KA+V KC+ M   +++ + C  CGY+NGMVK+   Q+
Sbjct: 127  LYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMA--SQRIITCKNCGYLNGMVKKVAAQM 184

Query: 3144 KII---HERKNIANNGLDEFQSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCEL 2986
             II   H+R  I    +DEF+SA+SHT+ +      L   +D  +V  L K M D+DCEL
Sbjct: 185  GIIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCEL 244

Query: 2985 LYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANA-CLRSEMAE 2809
            LY+  RPE L +  + VPP   RPSV + GG QSNEND+TER+K I+Q NA C +     
Sbjct: 245  LYIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQA 303

Query: 2808 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 2629
            T S + +  W+ ++ EVAQYINSE RG+ N  Q +S+PLSG +QRLKGKQGRFR NLSGK
Sbjct: 304  TTSPKNMQVWDTVQSEVAQYINSEVRGIPN--QPDSKPLSGILQRLKGKQGRFRANLSGK 361

Query: 2628 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 2449
            RVE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+
Sbjct: 362  RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 421

Query: 2448 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 2269
             ++ PDG   +LV + RK  AD+L  GCIV RHLE+GD VLFNRQPSLHRMSIM HRARI
Sbjct: 422  SVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 481

Query: 2268 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 2089
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVA
Sbjct: 482  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 541

Query: 2088 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 1909
            STQDFLTSS+LITRKDTFYDR+AFSL+CSY+GDAMD+IDLPTP ++KP+ELWTGKQ+FSV
Sbjct: 542  STQDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSV 601

Query: 1908 LLRPHAKMRVYLNLTVAEKSYMKSK--ETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 1735
            LLRP+A +RVY+ L V EK++ K K  ETMC  DG+VY RNSELISGQLGKATLGNGNKD
Sbjct: 602  LLRPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNKD 661

Query: 1734 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 1555
            G+YSVLLRDY  HAAA CMNRLAKLSARWIG HGFS+GI+DVQPG+ L +E++  I+  Y
Sbjct: 662  GLYSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGY 721

Query: 1554 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 1375
              C   IR +  G L+L  G D+A++LES I+  LN IREAT  +CM+ L+WRNSPLIMS
Sbjct: 722  EDCGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMS 781

Query: 1374 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 1195
            QCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P+AKGFV NSFY+G
Sbjct: 782  QCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSG 841

Query: 1194 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 1015
            L+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF 
Sbjct: 842  LTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFT 901

Query: 1014 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMD-QKFLTTDEIKEIVTETIESKLFK 838
            YG D MDP  ME K G PLNF+RLF+K +ATCP      FL+++E+     +  E +L +
Sbjct: 902  YGDDGMDPVLMEGKDGAPLNFDRLFLKIQATCPPRSHHSFLSSEEL----LQKFEEELVR 957

Query: 837  SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRY 658
                    H  S           C  AF  SL++F+      S L L+ T          
Sbjct: 958  --------HDTSRV---------CTDAFVKSLREFL------SLLGLRSTSP-------- 986

Query: 657  HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFH 478
                V    SG+T  Q+ VF++ C+SRY+ K                GEPGTQMTLKTFH
Sbjct: 987  --SQVFYKASGVTDKQIEVFVKICVSRYREKTIEAGTAIGTIGAQSIGEPGTQMTLKTFH 1044

Query: 477  FAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXXXX 298
            FAGVASMN+T GVPR            TPVI+A L                         
Sbjct: 1045 FAGVASMNITQGVPRINEIINASKNISTPVISAEL----------------------ENP 1082

Query: 297  XXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKES 118
                +AR VKGRIE+T L QVA+SI+   TS SAS+ + LD  RI+ A LSI   SVK S
Sbjct: 1083 LELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKRIEEACLSISPWSVKTS 1142

Query: 117  ILRTPKMKLQAQHINILD 64
            IL+TP++KL   +I ILD
Sbjct: 1143 ILKTPRIKLNDDNIRILD 1160


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score = 1381 bits (3574), Expect = 0.0
 Identities = 722/1240 (58%), Positives = 877/1240 (70%), Gaps = 15/1240 (1%)
 Frame = -1

Query: 3678 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 3499
            ++ TK+P+IEDVG R+I+SI+FS  SG ++++ +EVQV+  + Y+   KPV  GLLD  M
Sbjct: 8    LRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPNGLLDTRM 67

Query: 3498 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 3319
            G  NK G+C TC  +F  CPGH G+L LALPVFNVG+   I+ ++KCICK CSR+LL EK
Sbjct: 68   GAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRVLLMEK 127

Query: 3318 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGMVK--RQQL 3145
            DR +FL++MRNPK + L+K+ I+K +  KC        K   C  CG++NG+ K  R  L
Sbjct: 128  DRLEFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVAKKGRAGL 179

Query: 3144 KIIHERKNIANNGLDEFQSALSHTQANVSLPST--IDAKMVYELLKNMRDEDCELLYLND 2971
             I+H+     +   +E + ALSH +  +S+ +   +D  +V  L K M DEDCELL L D
Sbjct: 180  IILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGD 239

Query: 2970 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-- 2797
            RPEKL+VT I VPP  IRPSVFV GG  SNE+ IT  LK I   N+ L+  + +T  Q  
Sbjct: 240  RPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENL-QTGGQFM 298

Query: 2796 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 2617
            +    W+ L+ +V +YINS+A  L  +         G +QRLKGK GRFRGNLSGKR E+
Sbjct: 299  KCFDCWQHLQLQVVEYINSDAPSLPESQHR------GLVQRLKGKTGRFRGNLSGKRTEY 352

Query: 2616 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 2437
            TGRTVISPDPNL+ITEVA+PILMAR+LTYPERVS++NIEKLRQ +RNGP K+PGA FI  
Sbjct: 353  TGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQ 412

Query: 2436 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 2257
            PDG ++ L Y  R+  A  L+YGC+V RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 413  PDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 472

Query: 2256 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2077
            TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 473  TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 532

Query: 2076 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 1897
            FLTSSFL+TRKD FYDRS+FSL+CSYLGDAM++IDLPTPAL+KP+ELWTGKQLFSVL+RP
Sbjct: 533  FLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRP 592

Query: 1896 HAKMRVYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 1735
            +A  +V+LNLTV EK Y   K      E MCP DGFVY RNSEL+SGQ+GKATLGNGNKD
Sbjct: 593  NACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKD 652

Query: 1734 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 1555
            G++S L+RDY  HAAA+CMNRLAK SAR+IGNHGFSIG++DVQPG+ LN+EKK+ ID  Y
Sbjct: 653  GMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGY 712

Query: 1554 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 1375
              C D I  Y+ G+L L PGC++A+TLE  I+  LN IRE    VCM  L+WRNSPLIMS
Sbjct: 713  KDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMS 772

Query: 1374 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 1195
            QCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDRTLPHF   +K P AKGFV NSFYTG
Sbjct: 773  QCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTG 832

Query: 1194 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 1015
            L+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+FYD TVRNAS  IVQF+
Sbjct: 833  LTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFL 892

Query: 1014 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKS 835
            YG D MDPA+ME K G PLN ++LFMK  ATCP   Q  L+  EI +I+ + +       
Sbjct: 893  YGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEH---- 948

Query: 834  SVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEEH-SEED 664
                           DA S +GC + F   L  F+E   K   S  R  L  E+H  E  
Sbjct: 949  ---------------DASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERH 993

Query: 663  RYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXGEPGTQMTLKT 484
                E++A+NISGI+  QL VFL TC+SRY  KK               GEPGTQMTLKT
Sbjct: 994  SSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKT 1053

Query: 483  FHFAGVASMNVTLGVPRXXXXXXXXXXXKTPVITAVLXXXXXXXXXXXXXXXXXXXXXXX 304
            FHFAGVASMNVTLGVPR            TP+ITA L                       
Sbjct: 1054 FHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAEL----------------------L 1091

Query: 303  XXXXDVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVK 124
                 ++AR+VKG +E+ +L +VA++IK    S   +++V LD  RI+   + I A SV+
Sbjct: 1092 SEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQ 1151

Query: 123  ESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFE 4
             SIL  PK+KL+++H+ ++D  KL ++    DK SK ++E
Sbjct: 1152 LSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDK-SKLLYE 1190