BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00010814
         (2261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   465   e-128
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   432   e-118
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   428   e-117
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               415   e-113
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   411   e-112
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   407   e-110
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   403   e-109
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   399   e-108
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   398   e-108
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       393   e-106
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   385   e-104
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               384   e-103
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   382   e-103
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                382   e-103
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   380   e-102
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           380   e-102
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             373   e-100
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   367   1e-98
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   366   2e-98
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   365   6e-98

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  465 bits (1197), Expect = e-128
 Identities = 259/683 (37%), Positives = 379/683 (55%), Gaps = 10/683 (1%)
 Frame = -2

Query: 2245 GYRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVD 2066
            G  LS + +  LIR V+  EI  AL  IG+DKAPG DG+ + FFKK+W  +  ++ A + 
Sbjct: 423  GKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQ 482

Query: 2065 EFFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRL 1886
            EFF+   + R +N  VV+L+PK  H   V +FRPIAC  V+YKII+K+L++RM  ++  +
Sbjct: 483  EFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEV 542

Query: 1885 ISPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVL 1706
            ++ +QS FI GR+I DN  LA ELI+ Y RK  ++ RC++K+D+RKAYD + W FL  +L
Sbjct: 543  VNEAQSGFIPGRHIADNILLASELIRGYTRKH-MSPRCIMKVDIRKAYDSVEWSFLETLL 601

Query: 1705 YGLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSR 1526
            Y   F   F+ WI+ CV++ ++S+ +NG      + ++GLRQGDPMSP LF  CM+YLSR
Sbjct: 602  YEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSR 661

Query: 1525 LLHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAI 1346
             L     +  F  HPKC+  +ITHL FADDLL+F R D  S+  +    ++F+  SGLA 
Sbjct: 662  CLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAA 721

Query: 1345 NKSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNF 1166
            +  KS+I+  GV      E+ +      G LP +YLG+PL SK LT      L+  I+N 
Sbjct: 722  SHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNR 781

Query: 1165 IHRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSS 1001
               W    LS AGRL+LI+S+L  ++ YW    PL   VI  + K+ RKFLW      + 
Sbjct: 782  AQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETK 841

Query: 1000 YCPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDI 821
              PV+W T+  P+  GG  + ++  WN+A   K LW I  K D LW++WIH+ Y++ QDI
Sbjct: 842  KAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDI 901

Query: 820  WEFPFPKRDAPHITNILRIRDRLILDCGGNLNDAKTKLAGWFTGKGTSEAYEHFRTKGEK 641
                   +    +  I++ RD L      N+ D      G        +AY+     GE+
Sbjct: 902  LTVNISNQTTWILRKIVKARDHL-----SNIGDWDEICIG--DKFSMKKAYKKISENGER 954

Query: 640  KFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLKHSDIA--RGCVLCDSSDETHDHLFF 467
              W + I  +Y  PK    LW+ L  RL T+DR+    +       LC +  ET  HLFF
Sbjct: 955  VRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGETIQHLFF 1014

Query: 466  TCEKSLAVWSGICSWLRCRNQMIT---IPSAVRRFQREKAGSGIIRKAKWVALGATVQYL 296
            +C  S  VWS IC  +R  N  ++   I S+V    R+K G  I+     +     V  +
Sbjct: 1015 SCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQARKKKGKLIV-----MLYTEFVYAI 1069

Query: 295  WQARNLKYVAKKPFEVSHVIKEI 227
            W+ RN +    +  + + V+++I
Sbjct: 1070 WKQRNKRTFTGENKDENEVLRKI 1092


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  432 bits (1110), Expect = e-118
 Identities = 255/686 (37%), Positives = 368/686 (53%), Gaps = 14/686 (2%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            YR S  E+  L+  ++  E+    F I  +K+PGPDGYT  FF++ W ++  +V  A+  
Sbjct: 705  YRYSLHEQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKS 764

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF+ G + + LN T+++LIPK ++   + D+RPI+C NV+YK I+K+L++R+  LL   I
Sbjct: 765  FFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFI 824

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            +P+QSAFI  R +M+N  LA EL+K Y  K G++ RC +KIDL KA+D + W FL + L 
Sbjct: 825  APNQSAFISDRLLMENLLLASELVKDYH-KDGLSPRCAMKIDLSKAFDSVQWPFLLNTLA 883

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             L+    FIHWI  C+++A+FS+ +NG           LRQG  +SP LF+ CM+ LS +
Sbjct: 884  ALDIPEKFIHWINLCISTASFSVQVNG-----------LRQGCSLSPYLFVICMNVLSAM 932

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L        F +HP+C    +THL FADD+++F  G   S+  +    ++F A SGL I+
Sbjct: 933  LDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNIS 992

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
              KS +F+  +       IL  F F  G+LPV+YLGLPL +K +T  D   L+ +I + I
Sbjct: 993  LEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRI 1052

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-GSSYCP-- 992
              W    LS AGRL+L+ SV+  +  +W+ A  LP   I  I ++   FLW G+   P  
Sbjct: 1053 SSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHK 1112

Query: 991  --VSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              V+W  VC P+ EGGLGLR L   NK    K +W + +   +LW+ WI    +R   + 
Sbjct: 1113 AKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIR--TVA 1170

Query: 817  EFPFPKRDAPHITNILR-IRDRL-ILDCGGNLNDAKTKL----AGWFTGKGTS-EAYEHF 659
            E     R   H  +IL  I + L  L C G   +    L     G F  K  S E +   
Sbjct: 1171 EALSSHRRRSHRDDILNDIEEELEKLLCRGICTEQDRSLCRSIGGQFKAKFFSPEIWHQI 1230

Query: 658  RTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLK--HSDIARGCVLCDSSDET 485
            R +G  K WHKAIW S   PKF+   WLA   RL T D++   +  I+  CVLC+ S E+
Sbjct: 1231 REQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAES 1290

Query: 484  HDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREKAGSGIIRKAKWVALGATV 305
             DHLFF+C  S  +W  +   L         P+ +     +   SG  R        AT+
Sbjct: 1291 RDHLFFSCNFSSHIWDRLTRRLLLCRYTTNFPALLLLLSGQDF-SGTKRFLLRYVFQATI 1349

Query: 304  QYLWQARNLKYVAKKPFEVSHVIKEI 227
              LW+ RN +     P    H+IK I
Sbjct: 1350 HTLWRERNKRRHGDLPIPSDHIIKFI 1375


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  428 bits (1100), Expect = e-117
 Identities = 245/690 (35%), Positives = 365/690 (52%), Gaps = 13/690 (1%)
 Frame = -2

Query: 2257 VMGAGYRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVV 2078
            V+  G +LS     +L++P+++ EI  AL DI D KAPG DG+ S FFKK+W ++  ++ 
Sbjct: 422  VVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIY 481

Query: 2077 AAVDEFFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPL 1898
              + +FF  G + + +N T V+LIPK        D+RPIAC + +YKII+KIL+ R+  +
Sbjct: 482  EGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAV 541

Query: 1897 LQRLISPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFL 1718
            +  ++  +Q+ FI  R+I DN  LA ELI+ Y R R ++ RC++K+D+RKAYD + W FL
Sbjct: 542  ITEVVDCAQTGFIPERHIGDNILLATELIRGYNR-RHVSPRCVIKVDIRKAYDSVEWVFL 600

Query: 1717 RDVLYGLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMD 1538
              +L  L F   FI WI+ CV + ++SI +NG        Q+GLRQGDP+SP LF   M+
Sbjct: 601  ESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSME 660

Query: 1537 YLSRLLHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATS 1358
            YLSR +        F  HPKC+   +THL FADDLL+F R D  S+  +      F+  S
Sbjct: 661  YLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKAS 720

Query: 1357 GLAINKSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQ 1178
            GL  +  KS I+ GGV   E  ++ +    P G+LP +YLG+PLASK L       LI +
Sbjct: 721  GLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDK 780

Query: 1177 ISNFIHRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW---- 1010
            I+     W    LS AGRL+L++++L  ++ YW Q  PLP  +I  +    RKFLW    
Sbjct: 781  ITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTV 840

Query: 1009 GSSY-CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLR 833
             +SY  PV+W  +  P+  GGL + ++ +WNKA   K LW I  K D LW++W++A Y++
Sbjct: 841  DTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIK 900

Query: 832  GQDIWEFPFPKRDAPHITNILRIRDRLILDCGGNLNDAKTKLAGW-----FTGKGTSEAY 668
             Q+I         +  +  I   R+ L            T+  GW            + Y
Sbjct: 901  RQNIENVTVSSNTSWILRKIFESRELL------------TRTGGWEAVSNHMNFSIKKTY 948

Query: 667  EHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLK--HSDIARGCVLCDSS 494
            +  +   E   W + I  +   PK    LWLA+  RL T +R+   + D++  C +C + 
Sbjct: 949  KLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNE 1008

Query: 493  DETHDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREKAGSGIIRKAKWVAL- 317
             ET  HLFF C  S  +W  +  +L  + Q      A +    +KA S   R   +V + 
Sbjct: 1009 IETIQHLFFNCIYSKEIWGKVLLYLNLQPQ--ADAQAKKELAIKKARSTKDRNKLYVMMF 1066

Query: 316  GATVQYLWQARNLKYVAKKPFEVSHVIKEI 227
              +V  +W  RN K         +  +K I
Sbjct: 1067 TESVYAIWLLRNAKVFRGIEINQNQAVKSI 1096


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/501 (42%), Positives = 300/501 (59%), Gaps = 6/501 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            +R +  +   L R VS  EI+T LF +  DK+PGPDGYTS F+K  WD++  +    V  
Sbjct: 86   FRCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQS 145

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF KG + + +N  +++LIPK      + D+RPI+C NV+YK+I+KI+++R+  LL R I
Sbjct: 146  FFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFI 205

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            + +QSAF+K R +++N  LA EL+K Y  K  I+ARC +KID+ KA+D + W FL + L 
Sbjct: 206  AENQSAFVKDRLLIENLLLATELVKDYH-KDSISARCAIKIDISKAFDSVQWSFLTNTLV 264

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             +NF P FIHWI  C+T+A+FS+ +NG   G+ + +RGLRQG  +SP LF+ CMD LS++
Sbjct: 265  AMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKM 324

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L        F  HPKC    +THL+FADDL++   G   S+  + +  +EF   SGL I+
Sbjct: 325  LDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRIS 384

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
              KS +++ GV P  K EI   F F  G LPV+YLGLPL +K LT+ DY+ L+ QI   I
Sbjct: 385  LEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRI 444

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGSS-----Y 998
              W++   S AGR  LI+SVL  +  +WL A  LP   I  I KL   FLW  S      
Sbjct: 445  ATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHK 504

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              +SW  VC P+ EGGLGLR+L   N     K +W I + +++LW KW+    +R + IW
Sbjct: 505  AKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIW 564

Query: 817  EFPFPKRDAPHI-TNILRIRD 758
                       I   IL+IRD
Sbjct: 565  SLKQSTSMGSWIWRKILKIRD 585



 Score = 67.0 bits (162), Expect = 4e-08
 Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
 Frame = -2

Query: 682  TSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRL----KHSDIARG 515
            T + +   +       WHK +W  +  PK+++  WLA+  RL T DR+        ++  
Sbjct: 687  TRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGN 746

Query: 514  CVLCDSSDETHDHLFFTCEKSLAVWSGICSWL---RCRNQMITIPSAVRRFQREKAGSGI 344
            CVLC ++ +T +HLFF+C  +  VW+ +   +   R   +   + + +    +++    +
Sbjct: 747  CVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYSTRWSHLLTHISTHFQDRVEGFL 806

Query: 343  IRKAKWVALGATVQYLWQARN 281
             R        AT+ ++W+ RN
Sbjct: 807  TR----YIFQATIYHVWRERN 823


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  411 bits (1057), Expect = e-112
 Identities = 245/681 (35%), Positives = 357/681 (52%), Gaps = 13/681 (1%)
 Frame = -2

Query: 2230 PEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAA-VDEFFS 2054
            P+    L    +  +IR   F +  +K+PGPDG+   FF+K W ++ ++VVAA V EFFS
Sbjct: 263  PDLAKSLCNEFTHDDIRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFS 322

Query: 2053 KGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLISPS 1874
             G +L +LN T+++L+PK ++   +SDFRPI+C N  YKII K+L++R+   L  ++ PS
Sbjct: 323  YGSLLMELNSTIITLVPKVANPTTMSDFRPISCCNTFYKIIAKLLANRLKGTLHLIVGPS 382

Query: 1873 QSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLYGLN 1694
            QS FI GR I DN  LA+E+I  Y +  G   RC   +D+ KA D + WDF+   L   N
Sbjct: 383  QSTFIPGRRIGDNILLAQEIICDYHKADG-QPRCTFMVDMMKANDTVEWDFIIATLQAFN 441

Query: 1693 FHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRLLHA 1514
                 I WI +C++SA FS+ +NG   GF   +RGLRQGDP+SP LF+  M+ LS  +  
Sbjct: 442  IPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQR 501

Query: 1513 RTHAST-FIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAINKS 1337
            R + S  F +H +CD  +++HL FADDLL+F  GD +S+R L D    F + S L  N S
Sbjct: 502  RINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVS 561

Query: 1336 KSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFIHR 1157
            +S IFL GV       +L++  F  GT PV+YLG+PL +  L   D + L+ +I   I  
Sbjct: 562  ESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKS 621

Query: 1156 WSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSSYCP 992
            W    LS AGRL+LI+SVL  ++ YW   L LP  V+  I K +R FLW     G +   
Sbjct: 622  WENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATK 681

Query: 991  VSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIWEF 812
            V+W  +CLP+ EGGLG++DL  WNKAL    +WN+ + +   W  W+    L+G   W  
Sbjct: 682  VAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNA 741

Query: 811  PFPKRDAPHITNILRIRDRLILDCGGNLNDAKTKLAGWFTGKGTSEAYEHFRTKGEKKFW 632
            P P   + +   +L+IR+   L C   +N     + G   G+ TS  ++++   G     
Sbjct: 742  PLPSICSWNWRKLLKIRE---LCCSFFVN-----IIG--DGRATSLWFDNWHPLGPLTL- 790

Query: 631  HKAIWRSYI--PPKFSVTLWLALQGRLKTLDRLKHSDIARGCV----LCDSSDETHDHLF 470
                W S I      S +  L   G   T         +R  V    L     ETH+HLF
Sbjct: 791  ---RWSSNIIGESGLSKSAMLTPNGFYSTSSAWNTLRPSRFIVPWYRLVWFVAETHNHLF 847

Query: 469  FTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREKAGSGIIRKAKWVALGATVQYLWQ 290
            F C  S  +W+ + S       ++     +        G+ +      +AL A V  +W+
Sbjct: 848  FDCAYSFGIWTHVLSKCDVSKPLLPWSDFIFWVATNWKGNSLPVVILKLALQAVVYAIWR 907

Query: 289  ARNLKYVAKKPFEVSHVIKEI 227
             RN +    +    + V K I
Sbjct: 908  ERNNRRFRNESLPPAVVFKGI 928


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  407 bits (1045), Expect = e-110
 Identities = 206/480 (42%), Positives = 295/480 (61%), Gaps = 5/480 (1%)
 Frame = -2

Query: 2239 RLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDEF 2060
            R S  ++  LIRPV+  EIR  LF +  DK+PGPDGYTS FFK  W+++ ++   AV  F
Sbjct: 440  RCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSF 499

Query: 2059 FSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLIS 1880
            F+KG + + +N T+++LIPK +    + D+RPI+C NV+YK+I+KI+++R+  +L + I+
Sbjct: 500  FTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIA 559

Query: 1879 PSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLYG 1700
             +QSAF+K R +++N  LA EL+K Y  K  I+ RC +KID+ KA+D + W FL +V   
Sbjct: 560  GNQSAFVKDRLLIENLLLATELVKDYH-KDTISTRCAIKIDISKAFDSVQWPFLINVFTI 618

Query: 1699 LNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRLL 1520
            L F   FIHWI  C+T+A+FS+ +NG   G+ +  RGLRQG  +SP LF+ CMD LS++L
Sbjct: 619  LGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKML 678

Query: 1519 HARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAINK 1340
                 A  F +HPKC T  +THL+FADDL++   G   S+  +    +EF   SGL I+ 
Sbjct: 679  DKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISL 738

Query: 1339 SKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFIH 1160
             KS ++L G+    + E+ + F F  G LPV+YLGLPL +K L+T D   L+ Q+   I 
Sbjct: 739  EKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIG 798

Query: 1159 RWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSSYC 995
             W+   LS AGRL LI SVL  +  +WL A  LP   I  + K+   FLW      S+  
Sbjct: 799  SWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKA 858

Query: 994  PVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIWE 815
             +SW  VC P+ EGGLGLR L   N     K +W I + +++LW+KW+    LR    WE
Sbjct: 859  KISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWE 918



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
 Frame = -2

Query: 682  TSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLKH--SDIARGCV 509
            T + + H R+   +  WHK IW S+  PK+S   WLA  GRL T DR+ +  + IA  C+
Sbjct: 1040 TRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCI 1099

Query: 508  LCDSSDETHDHLFFTCEKSLAVWSGICSWL---RCRNQMITIPSAVRRFQREKAGSGIIR 338
             C  + ET DHLFFTC  +  +W  +   +   +  +   +I  A+   Q  +    + R
Sbjct: 1100 FCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSIIEAITNSQHHRVEWFLRR 1159

Query: 337  KAKWVALGATVQYLWQARNLKYVAKKPFEVSHVIKEIKLDVYRVLYSL 194
                    AT+  +W+ RN +   + P   S ++  I   +   L S+
Sbjct: 1160 ----YVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDKQIRNQLSSI 1203


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  403 bits (1035), Expect = e-109
 Identities = 198/480 (41%), Positives = 298/480 (62%), Gaps = 5/480 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            ++     R  L   VS  +I++  F +  +K+PGPDGYTS FFKK W ++   ++AAV E
Sbjct: 432  FKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQE 491

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF  G +L + N T V+++PK  +   +++FRPI+C N +YK+I+K+L+ R+  +L   I
Sbjct: 492  FFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLWI 551

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            SPSQSAF+KGR + +N  LA EL++ + +   I++R ++K+DLRKA+D + W F+ + L 
Sbjct: 552  SPSQSAFVKGRLLTENVLLATELVQGFGQAN-ISSRGVLKVDLRKAFDSVGWGFIIETLK 610

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
              N  P F++WI  C+TS +FSI ++G   G+ +G +GLRQGDP+SP+LF+  M+ LSRL
Sbjct: 611  AANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRL 670

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L  +    +  +HPK     I+ LAFADDL++F  G   S+R ++  LE F   SGL +N
Sbjct: 671  LENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMN 730

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
              KS ++  G+   +K + L  FGF  GT P +YLGLPL  + L   DY+ LI +I+   
Sbjct: 731  TEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARF 789

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGSSY----- 998
            + W+   LS AGRL+LI SV+     +WL +  LP   +  I ++  +FLWG+       
Sbjct: 790  NHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGD 849

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              VSW+  CLP+ EGGLGLR+   WNK L+ + +W + A+ D+LW+ W HA  LR  + W
Sbjct: 850  IKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFW 909


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  399 bits (1026), Expect = e-108
 Identities = 203/480 (42%), Positives = 288/480 (60%), Gaps = 5/480 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            YR S  ++  L R V+  EI+  LF + ++K+PGPDGYTS FFK  W L   D +AA+  
Sbjct: 736  YRCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQS 795

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF KG + + LN T+++LIPK      + D+RPI+C NV+YK+I+KIL++R+  LL   I
Sbjct: 796  FFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFI 855

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
              +QSAF+K R +M+N  LA EL+K Y  K  +T RC +KID+ KA+D + W FL + L 
Sbjct: 856  LQNQSAFVKERLLMENVLLATELVKDYH-KESVTPRCAMKIDISKAFDSVQWQFLLNTLE 914

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             LNF   F HWI  C+++ATFS+ +NG   GF    RGLRQG  +SP LF+ CM+ LS +
Sbjct: 915  ALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHM 974

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            +          +HPKC+   +THL FADDL++F  G   S+  + +  +EF   SGL I+
Sbjct: 975  IDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQIS 1034

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
              KS I+L GV   ++++ L  F F  G LPV+YLGLPL +K +TT DY+ LI  +   I
Sbjct: 1035 LEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKI 1094

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGS-----SY 998
              W+  +LS AGRL L+ SV+  +  +W+ A  LP   I  I KL   FLW         
Sbjct: 1095 SSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKK 1154

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              ++W ++C P+KEGGLG++ LA  NK    K +W + +   +LW+ WI    +R    W
Sbjct: 1155 AKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFW 1214



 Score = 76.6 bits (187), Expect = 4e-11
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = -2

Query: 682  TSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLK--HSDIARGCV 509
            T   + + RT   ++ W+K +W  Y  PK+S  LWL +Q RL T DR+K  +S     C 
Sbjct: 1338 TKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCT 1397

Query: 508  LCDSSDETHDHLFFTCEKSLAVWSGICSWLRCRN 407
            LC++++ET DHLFF+C+ +  VW  +   L   N
Sbjct: 1398 LCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTN 1431


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  398 bits (1023), Expect = e-108
 Identities = 202/480 (42%), Positives = 291/480 (60%), Gaps = 5/480 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            +R S ++   L R V+  EI+  +F +  DK+PGPDGYTS F+K +W+++ ++V+ A+  
Sbjct: 160  FRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQS 219

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF+KG + + +N T+++LIPK      + D+RPI+C NV+YK I+KIL++R+  +L + I
Sbjct: 220  FFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFI 279

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
              +QSAF+K R +++N  LA EL+K Y  K  I+ RC +KID+ KA+D + W FL  VL 
Sbjct: 280  VGNQSAFVKDRLLIENVLLATELVKDYH-KDSISTRCAMKIDISKAFDSLQWSFLTHVLA 338

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             +NF   FIHWI  C+++A+FSI +NG   G+ R  RGLRQG  +SP LF+  MD LSR+
Sbjct: 339  AMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRM 398

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L     A  F +HP+C T  +THL FADDL++   G   S+  +   L +F A  GL I 
Sbjct: 399  LDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKIC 458

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
              K+ ++L GV  + +  +   + F  G LPV+YLGLPL +K LTT DY+ LI QI   I
Sbjct: 459  MEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRI 518

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGS-----SY 998
              W+   LS AGRL LI SVL  +  +W+ A  LP   IN I ++    LW         
Sbjct: 519  GMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKK 578

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              VSW  +C P+KEGGLGL+ L   NK    K +W + +  D+LW+KW     L+ +  W
Sbjct: 579  AKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFW 638



 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
 Frame = -2

Query: 682  TSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLK--HSDIARGCV 509
            T + + H RT   ++ WHK +W ++  PKFS   WLA++ RL T DR+   ++     CV
Sbjct: 762  TKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCV 821

Query: 508  LCDSSDETHDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREKAGSGIIRKAK 329
             C S  ET DHLFF C  S  +W+ I   +  +++  T  SAV  +  +     I     
Sbjct: 822  FCSSPMETRDHLFFQCCYSSEIWTSIAKNV-YKDRFSTKWSAVVNYISDSQPDRIQSFLS 880

Query: 328  WVALGATVQYLWQARNLKYVAKKPFEVSHVIKEI 227
                  ++  +W+ RN +   +K    S++I++I
Sbjct: 881  RYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQI 914


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  393 bits (1010), Expect = e-106
 Identities = 200/499 (40%), Positives = 297/499 (59%), Gaps = 5/499 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            YR SP +  EL    S  +IR ALF +  +K+ GPDG+T+ FF  +W ++  +V  A+ E
Sbjct: 433  YRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIKE 492

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FFS G +L++ N T + LIPK  +    SDFRPI+C N +YK+I ++L+ R+  LL  +I
Sbjct: 493  FFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRLQRLLSGVI 552

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            S +QSAF+ GR++ +N  LA +L+  Y     I+ R M+K+DL+KA+D + W+F+   L 
Sbjct: 553  SSAQSAFLPGRSLAENVLLATDLVHGYNWSN-ISPRGMLKVDLKKAFDSVRWEFVIAALR 611

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             L     FI+WI  C+++ TF+++INGG+ GF +  +GLRQGDP+SP LF+  M+  S L
Sbjct: 612  ALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNL 671

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            LH+R  +    +HPK     I+HL FADD+++F  G   S+  + +TL++F + SGL +N
Sbjct: 672  LHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVN 731

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
            K KSH++L G+   E       +GFP GTLP++YLGLPL ++ L   +Y  L+ +I+   
Sbjct: 732  KDKSHLYLAGLNQLES-NANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARF 790

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGSSY----- 998
              W    LS AGR++LI SV+ G   +W+    LP   I RI  L  +FLW  +      
Sbjct: 791  RSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKG 850

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              VSW  +CLP+ EGGLGLR L  WNK L  + +W +    D+LW  W H  +L     W
Sbjct: 851  IKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFW 910

Query: 817  EFPFPKRDAPHITNILRIR 761
                 + D+     +L +R
Sbjct: 911  AVEGGQSDSWTWKRLLSLR 929



 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
 Frame = -2

Query: 691  GKGTSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLK-----HSD 527
            G   ++ +E  R K   K W  +IW     PK++  +W++   RL T  RL       SD
Sbjct: 1032 GFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSD 1091

Query: 526  IARGCVLCDSSDETHDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREKAGSG 347
                CVLC  + E+ DHL   CE S  VW  +   +  R ++ +  S +  + R+ +   
Sbjct: 1092 ---ACVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEA 1148

Query: 346  --IIRKAKWVALGATVQYLWQARN 281
              ++RK   +     V  LW+ RN
Sbjct: 1149 PPLLRK---IVSQVVVYNLWRQRN 1169


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  385 bits (988), Expect = e-104
 Identities = 206/525 (39%), Positives = 311/525 (59%), Gaps = 10/525 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            YR SP +++ L  P S  +I+ A F +  +KA GPDG++  FF   W ++  +V  A+ E
Sbjct: 330  YRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHE 389

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF+ G +L++ N T + LIPK ++   +SDFRPI+C N VYK+I+K+L+ R+   L   I
Sbjct: 390  FFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAI 449

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            S SQSAF+ GR  ++N  LA EL+  Y +K  I    M+K+DLRKA+D + WDF+   L 
Sbjct: 450  SHSQSAFMPGRLFLENVLLATELVHGYNKKN-IAPSSMLKVDLRKAFDSVRWDFIVSALR 508

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             LN    F  WIL C+++A+FS+ +NG S G     +GLRQGDPMSP LF+  M+  S L
Sbjct: 509  ALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGL 568

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L +R  +    +HPK    +I+HL FADD+++F  G   S+  + ++LE+F   SGL +N
Sbjct: 569  LQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMN 628

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
             +K+ ++  G+   E  + +  +GF  G+LPV+YLGLPL S+ LT  +YA LI +I+   
Sbjct: 629  TNKTQLYHAGLSQSES-DSMASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARF 687

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGS-----SY 998
            + W    LS AGR++L+ SV+ G+  +W+ +  LP   I +I  L  +FLW S       
Sbjct: 688  NSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGI 747

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQ--D 824
              V+W  VCLP+ EGG+GLR  AV N+ L+ + +W + + + +LW+ W H ++  G+   
Sbjct: 748  AKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFSNSGSLWVAW-HKQHSLGKSTS 806

Query: 823  IWEFPFPKRDAPHITNILRIR---DRLILDCGGNLNDAKTKLAGW 698
             W  P    D+ +   +LR+R   +R I    GN  DA      W
Sbjct: 807  FWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGNGRDASFWFDNW 851


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  384 bits (985), Expect = e-103
 Identities = 196/470 (41%), Positives = 282/470 (60%), Gaps = 5/470 (1%)
 Frame = -2

Query: 2212 LIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDEFFSKGLILRK 2033
            L R VS  EI+  LF + +DK+PGPDG+TS FFK++W++L  + + A+  FF+ G + + 
Sbjct: 2    LTRVVSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKG 61

Query: 2032 LNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLISPSQSAFIKG 1853
            +N T+++LIPK      + D+RPI+C NV+YK+I+KIL++R+  LL + I+ +QS+F+K 
Sbjct: 62   VNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKD 121

Query: 1852 RNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIH 1673
            R +++N  LA +L+K Y  K  I+ RC +KID+ KA D + W FL + L  ++F   FIH
Sbjct: 122  RLLIENVLLATDLVKDYH-KDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIH 180

Query: 1672 WILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRLLHARTHASTF 1493
            WI  C+T+ +FS+ +NG   GF +  RGLRQG  +SP LF+ CMD LS+LL         
Sbjct: 181  WIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRI 240

Query: 1492 IHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAINKSKSHIFLGG 1313
             +HP C    +THL+FADDL++   G   S+  + +  + F+  SGL I+  KS IF  G
Sbjct: 241  GYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAG 300

Query: 1312 VRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFIHRWSYSNLSR 1133
            +    + ++   F F  G LP++YLGLPL +K L++ DYA LI QI   I  WS   LS 
Sbjct: 301  LSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSF 360

Query: 1132 AGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSSYCPVSWKTVCL 968
            AGR  LI S++     +WL A  LP   I  I KL   FLW      S    +SW  VC 
Sbjct: 361  AGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCK 420

Query: 967  PRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
            P+ EGGLGLR L   N     K +W I +  D+LW+KW+    L+ +  W
Sbjct: 421  PKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFW 470


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  382 bits (982), Expect = e-103
 Identities = 193/465 (41%), Positives = 284/465 (61%), Gaps = 7/465 (1%)
 Frame = -2

Query: 2191 GEIRTALFDIGDD--KAPGPDGYTSAFFKKNWDLLNNDVVAAVDEFFSKGLILRKLNHTV 2018
            G + T+  DI ++  K+PGPDGYT  FFK  W +L  D+V A+  FF KG + + +N T+
Sbjct: 601  GRVCTSHDDIKEEAHKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTI 660

Query: 2017 VSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLISPSQSAFIKGRNIMD 1838
            ++LI K     G+ D+RPI+C NV+YKI++K++++R+  +L   I+P+QSAFIK R +M+
Sbjct: 661  LALISKKHEVSGMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMME 720

Query: 1837 NFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIHWILTC 1658
            N  LA EL+K Y  K  I++R  +KID+ KA+D + W FL +VL  ++    FIHWI  C
Sbjct: 721  NLLLASELVKDYH-KESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELC 779

Query: 1657 VTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRLLHARTHASTFIHHPK 1478
            + +A+FS+ +NG   GF R +RGLRQG  +SP L++ CM+ LS +L          +HP+
Sbjct: 780  IGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPR 839

Query: 1477 CDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAINKSKSHIFLGGVRPYE 1298
            C   ++THL FADD+++F  G   S++      E+F A S L I+  KS IF+ G+ P  
Sbjct: 840  CRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNA 899

Query: 1297 KLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFIHRWSYSNLSRAGRLE 1118
            K  IL+ F F  GTLPVKYLGLPL +K +T  DY  L+ +I   I  W+   LS AGRL+
Sbjct: 900  KTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQ 959

Query: 1117 LIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSSYCPVSWKTVCLPRKEG 953
            LI+SVL  +  +WL    LP   +  I K+   FLW      +    ++W  VC  ++EG
Sbjct: 960  LIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEG 1019

Query: 952  GLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
            GLGL+ L   N+    K +W I +  D+LW+KW++   +R +  W
Sbjct: 1020 GLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFW 1064



 Score = 63.2 bits (152), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = -2

Query: 682  TSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRL-KHSDIAR-GCV 509
            +S+ ++  R+   +  W++ +W S   PK+S   WLA   RL T D++ K +  AR  CV
Sbjct: 1187 SSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICKWNSGARYDCV 1246

Query: 508  LCDSSDETHDHLFFTCEKSLAVWSGICSWL 419
             C    ET DHLFF+C  S  VW  +   L
Sbjct: 1247 FCGEELETRDHLFFSCPYSSHVWFSLTKGL 1276


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  382 bits (981), Expect = e-103
 Identities = 192/480 (40%), Positives = 284/480 (59%), Gaps = 5/480 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            +R S  ++  L R V+  E +  LF +  +K PGPDGYTS FFK  W +   D +AA+  
Sbjct: 12   FRCSATDQDMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKS 71

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF KG + + LN T+++LIPK      + D+RPI+C NV+YK+I+KI+++R+  +L   I
Sbjct: 72   FFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFI 131

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
              +QSAF++ R +++N  LA EL+K Y  K  I+ RC +KID+ KA+D + W FL + L 
Sbjct: 132  LQNQSAFVRERLLIENVLLATELVKDYH-KDSISPRCAMKIDISKAFDSVQWQFLLNTLE 190

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             LNF   F HWI  C+++ATFS+ +NG   GF   +RGLRQG  +SP LF+ CM+ LS +
Sbjct: 191  ALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHM 250

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            +          +HPKC    +THL FADDL++F  G   S+  + +  +EF   SGL I+
Sbjct: 251  IDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHIS 310

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
              KS ++L GV    +  IL  F F  G LPV+YLGLPL +K +TT DY+ L+ ++ + I
Sbjct: 311  LEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKI 370

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGS-----SY 998
              W+  +LS AGRL LI SV+  +  +W+ A  LP   I  I KL   FLW         
Sbjct: 371  SSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKK 430

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              ++W ++C  ++EGGLG++ L   NK    K +W + ++  +LW+ W+    +R    W
Sbjct: 431  AKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFW 490


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  380 bits (976), Expect = e-102
 Identities = 192/481 (39%), Positives = 288/481 (59%), Gaps = 5/481 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            YR S ++  EL +  +  EI+ A   +  +K  GPDGY+  FF+  W ++  +V+AA+ E
Sbjct: 293  YRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHE 352

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF  G +L++ N T + LIPKTS+   +S+FRPI+C N +YK+I+K+L+SR+  LL  +I
Sbjct: 353  FFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVI 412

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
              SQSAF+ GR++ +N  LA E++  Y R   I+ R M+K+DL+KA+D + W+F+   L 
Sbjct: 413  GHSQSAFLPGRSLAENVLLATEMVHGYNRLN-ISPRGMLKVDLKKAFDSVKWEFVTAALR 471

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             L     +I+WI  C+T+ +F+I++NG + GF R  +GLRQGDP+SP LF+  M+  S+L
Sbjct: 472  ALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKL 531

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L++R  +    +HPK     I+HL FADD+++F  G   SM  + +TL++F   SGL +N
Sbjct: 532  LYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVN 591

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
            K KS +F  G+   E++     +GFP GT P++YLGLPL  + L   DY  L+ ++S  +
Sbjct: 592  KDKSQLFQAGLDLSERI-TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARL 650

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSSY 998
              W    LS AGR +LI SV+ G+  +W+    LP   I +I  L  KFLW     G   
Sbjct: 651  RSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKS 710

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              VSW   CLP+ EGGLG R    WNK L  + +W +  +  +LW +W     L     W
Sbjct: 711  SKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFW 770

Query: 817  E 815
            +
Sbjct: 771  Q 771



 Score = 60.8 bits (146), Expect = 3e-06
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
 Frame = -2

Query: 691  GKGTSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLKHSDIARG- 515
            G   ++ +E  R +   K W K++W     PK +   W A   RL T  RL    +    
Sbjct: 891  GFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSA 950

Query: 514  -CVLCDSSDETHDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREK--AGSGI 344
             C LC    ET DHL   C+ S  VW  +   L  R +++   + +  + R+   A   +
Sbjct: 951  ECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSL 1010

Query: 343  IRKAKWVALGATVQYLWQARNLKYVAKKPFEVSHVIKEIKLDVYRVLYS 197
            +RK   V     V  LW+ RNL   +      S V + +  ++  V+ S
Sbjct: 1011 LRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILS 1056


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  380 bits (976), Expect = e-102
 Identities = 192/481 (39%), Positives = 288/481 (59%), Gaps = 5/481 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            YR S ++  EL +  +  EI+ A   +  +K  GPDGY+  FF+  W ++  +V+AA+ E
Sbjct: 293  YRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHE 352

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF  G +L++ N T + LIPKTS+   +S+FRPI+C N +YK+I+K+L+SR+  LL  +I
Sbjct: 353  FFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVI 412

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
              SQSAF+ GR++ +N  LA E++  Y R   I+ R M+K+DL+KA+D + W+F+   L 
Sbjct: 413  GHSQSAFLPGRSLAENVLLATEMVHGYNRLN-ISPRGMLKVDLKKAFDSVKWEFVTAALR 471

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             L     +I+WI  C+T+ +F+I++NG + GF R  +GLRQGDP+SP LF+  M+  S+L
Sbjct: 472  ALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKL 531

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L++R  +    +HPK     I+HL FADD+++F  G   SM  + +TL++F   SGL +N
Sbjct: 532  LYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVN 591

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
            K KS +F  G+   E++     +GFP GT P++YLGLPL  + L   DY  L+ ++S  +
Sbjct: 592  KDKSQLFQAGLDLSERI-TSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARL 650

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-----GSSY 998
              W    LS AGR +LI SV+ G+  +W+    LP   I +I  L  KFLW     G   
Sbjct: 651  RSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKS 710

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIW 818
              VSW   CLP+ EGGLG R    WNK L  + +W +  +  +LW +W     L     W
Sbjct: 711  SKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFW 770

Query: 817  E 815
            +
Sbjct: 771  Q 771



 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 4/169 (2%)
 Frame = -2

Query: 691  GKGTSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDRLKHSDIARG- 515
            G   ++ +E  R +   K W +++W     PK +   W A   RL T  RL    +    
Sbjct: 891  GFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSA 950

Query: 514  -CVLCDSSDETHDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQREK--AGSGI 344
             C LC    ET DHL   C+ S  VW  +   L  R +++   + +  + R+   A   +
Sbjct: 951  ECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSL 1010

Query: 343  IRKAKWVALGATVQYLWQARNLKYVAKKPFEVSHVIKEIKLDVYRVLYS 197
            +RK   V     V  LW+ RNL   +      S V + +  ++  V+ S
Sbjct: 1011 LRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILS 1056


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  373 bits (958), Expect = e-100
 Identities = 214/610 (35%), Positives = 331/610 (54%), Gaps = 12/610 (1%)
 Frame = -2

Query: 2029 NHTVVSLIPKTSHDPG--VSDFRPIACTNVVYKIITKILSSRMAPLLQRLISPSQSAFIK 1856
            ++  +  +P  S   G  +S +RP++C NV+YKII+KI+++R+  +L + I+ +Q+AF+K
Sbjct: 35   SYICIHFLPLLSSPTGHFISHYRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVK 94

Query: 1855 GRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFI 1676
             R +++N  LA EL+K Y  K  +++RC +KID+ KA++ + W F+R++L  ++F   F+
Sbjct: 95   DRLLIENLLLATELVKDYH-KESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFV 153

Query: 1675 HWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRLLHARTHAST 1496
            HWI+ C+++A+FS+ +NG   GF + +RGLRQG  +SP LF+  MD LS+LL     A  
Sbjct: 154  HWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKK 213

Query: 1495 FIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAINKSKSHIFLG 1316
            F +H +C    +THL+FADDL++   G   S+  + +  + F   SGL I+  KS I+L 
Sbjct: 214  FGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLA 273

Query: 1315 GVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFIHRWSYSNLS 1136
            GV      EI   + F  G LPV+YLGLPL +K LT  DY+ L+  I   I  W+   LS
Sbjct: 274  GVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLS 333

Query: 1135 RAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLW-GSSYCP----VSWKTVC 971
             AGRL LI SVL  +  +WL A  LP   I  I K+   FLW G    P    V W  VC
Sbjct: 334  YAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVC 393

Query: 970  LPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLWIKWIHAEYLRGQDIWEFPFPKRDA 791
             P++EGGLGLR L   N+    K +W I + T++LW++WI    L+    W         
Sbjct: 394  KPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFW-------SV 446

Query: 790  PHITNILRIRDRLILDCGGNLNDAKTKLAGWFTGKGTSEAYEHFRTKGEKKFWHKAIWRS 611
               TN+  +  R      G  ++   K +       T + +   R       WH  IW +
Sbjct: 447  QTTTNMDSVLWR------GRNDEYMPKFS-------TRDTWNQTRNTSTPVTWHMGIWFA 493

Query: 610  YIPPKFSVTLWLALQGRLKTLDRLK--HSDIARGCVLCDSSDETHDHLFFTCEKSLAVWS 437
            +  PKFS   WLA+Q RL T D++   +  ++  CVLC+++ ET +HLFF+C  +  +W 
Sbjct: 494  HATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWE 553

Query: 436  GICSWL---RCRNQMITIPSAVRRFQREKAGSGIIRKAKWVALGATVQYLWQARNLKYVA 266
             +   +   +      TI ++V    R +  S + R        AT+  +W  RN +   
Sbjct: 554  NLAKNIYKAKFSTNWSTILTSVSTTWRNRTESFLAR----YIFQATIHTIWHERNGRRHG 609

Query: 265  KKPFEVSHVI 236
            ++    +H+I
Sbjct: 610  ERSNSATHLI 619


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  367 bits (942), Expect = 1e-98
 Identities = 188/465 (40%), Positives = 280/465 (60%), Gaps = 5/465 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            +R S ++  +L R  S  +I+ A F +  +KA GPDGY+S FFK  W ++  +V  AV E
Sbjct: 434  FRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQE 493

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF  G +L++ N T + LIPK ++   ++DFRPI+C N +YK+I K+L+SR+  LL  +I
Sbjct: 494  FFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVI 553

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            SPSQSAF+ GR + +N  LA E++  Y  K  I++R M+K+DLRKA+D + WDF+     
Sbjct: 554  SPSQSAFLPGRLLSENVLLATEIVHGYNTKN-ISSRGMLKVDLRKAFDSVRWDFIISAFR 612

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             L     F+ WI  C+++  FS+ +NG S GF +  +GLRQGDP+SP LF+  M+  S L
Sbjct: 613  ALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSL 672

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L AR  A    +HPK     I+HL FADD+++F  G   S+  + + L++F + SGL +N
Sbjct: 673  LKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVN 732

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
            K K++++L G    E L I   +GFP  TLP++YLGLPL S+ L   +Y     ++    
Sbjct: 733  KDKTNLYLAGTDEVEALAISH-YGFPISTLPIRYLGLPLMSRKLKISEY-----ELVKRF 786

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGSSY----- 998
              W+  +LS AGR++LI SV+ G+  +W+    L    + +I  L  +FLW  S      
Sbjct: 787  RSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDASKG 846

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLW 863
              ++W  VCLP+ EGG+GLR    WNK  + + +W + A  D LW
Sbjct: 847  AKIAWSGVCLPKNEGGVGLRRFTPWNKTFYLRFIWPLFADNDVLW 891


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  366 bits (940), Expect = 2e-98
 Identities = 212/569 (37%), Positives = 311/569 (54%), Gaps = 14/569 (2%)
 Frame = -2

Query: 1945 VYKIITKILSSRMAPLLQ------RLISPSQSAFIKGRNIMDNFYLAEELIKTYERKRGI 1784
            V K  + +L SR + L        R +  +Q+AF+ G+ + D+  LA EL++ YERK G 
Sbjct: 345  VLKFYSALLGSRESNLAGLNIPAIRNVGKNQAAFVPGQQLHDHVMLAFELLRGYERKHG- 403

Query: 1783 TARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIHWILTCVTSATFSIAINGGSHGFV 1604
            T +CM++ID++KAYD + WD L  +L  L F   FI WI+  V S T+   ING     +
Sbjct: 404  TPKCMLQIDIQKAYDTVHWDALEHILRELGFPDQFIKWIMIAVRSVTYVFNINGRFTRRL 463

Query: 1603 RGQRGLRQGDPMSPTLFLFCMDYLSRLLHARTHASTFIHHPKCDTTDITHLAFADDLLLF 1424
              +RG+RQGDP+SP LF+  M+YL+R+L        F +H KC+   IT+L FADDLLLF
Sbjct: 464  EARRGIRQGDPISPLLFILVMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLF 523

Query: 1423 GRGDPDSMRVLRDTLEEFTATSGLAINKSKSHIFLGGVRPYEKLEILELFGFPEGTLPVK 1244
             RGD  S++++ D    F  + GL +N SK +I+ G V    K ++L + GF EG +P +
Sbjct: 524  SRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFR 583

Query: 1243 YLGLPLASKSLTTPDYASLITQISNFIHRWSYSNLSRAGRLELIRSVLQGVECYWLQALP 1064
            YLG+PL+SK L    Y  LI +I   I  WS   LS AGR++LI+SV+     +W+Q LP
Sbjct: 584  YLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLP 643

Query: 1063 LPGTVINRITKLIRKFLW-GSS----YCPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKT 899
            LP  VI RI  + R FLW G+S      P++W+ VC P+  GGL + +LA+WNK    K 
Sbjct: 644  LPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKL 703

Query: 898  LWNIHAKTDTLWIKWIHAEYLRGQDIWEFPFPKRDAPHITNILRIRDRLILDCGGNLNDA 719
            LWN+  K+D LWIKW+H  Y+RGQ IW     K  +  +++++++R  L+L     + D 
Sbjct: 704  LWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLRP-LLLQYQSRMQDV 762

Query: 718  -KTKLAGWFTGKGTSEAYEHFRTKGEKKFWHKAIWRSYIPPKFSVTLWLALQGRLKTLDR 542
             K K           + Y     + EK  W   +  +   P+    LW A   RL + DR
Sbjct: 763  FKMK-----------KIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDR 811

Query: 541  LKH--SDIARGCVLCDSSDETHDHLFFTCEKSLAVWSGICSWLRCRNQMITIPSAVRRFQ 368
            L     ++   C  C SS E+H+HLFF C +   +W+ + +WL+  +   T    +    
Sbjct: 812  LIKFGLNVDANCAFC-SSMESHEHLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWIT 870

Query: 367  REKAGSGIIRKAKWVALGATVQYLWQARN 281
            R+  G G        A   T+ ++W  RN
Sbjct: 871  RKCKGKGWRAMLLKCAFTETIYHIWAYRN 899


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  365 bits (936), Expect = 6e-98
 Identities = 187/465 (40%), Positives = 279/465 (60%), Gaps = 5/465 (1%)
 Frame = -2

Query: 2242 YRLSPEERMELIRPVSLGEIRTALFDIGDDKAPGPDGYTSAFFKKNWDLLNNDVVAAVDE 2063
            +R S ++  +L R  S  +I+ A F +  +KA GPDGY+S FFK  W ++  +V  AV E
Sbjct: 434  FRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQE 493

Query: 2062 FFSKGLILRKLNHTVVSLIPKTSHDPGVSDFRPIACTNVVYKIITKILSSRMAPLLQRLI 1883
            FF  G +L++ N T + LIPK ++   ++DFRPI+C N +YK+I K+L+SR+  LL  +I
Sbjct: 494  FFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVI 553

Query: 1882 SPSQSAFIKGRNIMDNFYLAEELIKTYERKRGITARCMVKIDLRKAYDCISWDFLRDVLY 1703
            SPSQSAF+ GR + +N  LA E++  Y  K  I++R M+K+DLRKA+D + WDF+     
Sbjct: 554  SPSQSAFLPGRLLSENVLLATEIVHGYNTKN-ISSRGMLKVDLRKAFDSVRWDFIISAFR 612

Query: 1702 GLNFHPCFIHWILTCVTSATFSIAINGGSHGFVRGQRGLRQGDPMSPTLFLFCMDYLSRL 1523
             L     F+ WI  C+++  FS+ +NG S GF +  +GLRQGDP+SP LF+  M+  S L
Sbjct: 613  ALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSL 672

Query: 1522 LHARTHASTFIHHPKCDTTDITHLAFADDLLLFGRGDPDSMRVLRDTLEEFTATSGLAIN 1343
            L AR  A    +HPK     I+HL FADD+++F  G   S+  + + L++F + SGL +N
Sbjct: 673  LKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVN 732

Query: 1342 KSKSHIFLGGVRPYEKLEILELFGFPEGTLPVKYLGLPLASKSLTTPDYASLITQISNFI 1163
            K K++++L G    E L I   +GFP  TLP++YLGLPL S+ L   +Y     ++    
Sbjct: 733  KDKTNLYLAGTDEVEALAISH-YGFPISTLPIRYLGLPLMSRKLKISEY-----ELVKRF 786

Query: 1162 HRWSYSNLSRAGRLELIRSVLQGVECYWLQALPLPGTVINRITKLIRKFLWGSSY----- 998
              W+  +LS AGR++LI SV+ G+  +W+    L    + +I  L  +FLW  S      
Sbjct: 787  RSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCSRFLWSGSIDASKG 846

Query: 997  CPVSWKTVCLPRKEGGLGLRDLAVWNKALHSKTLWNIHAKTDTLW 863
              ++W  VCLP+ EGG+ LR    WNK  + + +W + A  D LW
Sbjct: 847  AKIAWSGVCLPKNEGGVALRRFTPWNKTFYLRFIWPLFADNDVLW 891