BLASTX nr result

ID: Mentha27_contig00009130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00009130
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kD...    59   5e-07
emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]    57   3e-06

>ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Vitis vinifera]
          Length = 373

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +1

Query: 73  SLSRLKFSPTPPVSTTNIAALPLPFPVQS-HLPPPLRPHSTFSLSATLESRPPPASQEFS 249
           SLSRLK SP P    T+++ LP   P+ S HL P  R + T S     E+      + F 
Sbjct: 9   SLSRLKLSPKP----TSLSPLP-SLPLHSLHLRPARRFNLTVSQKQFEETEEVLKDEVFD 63

Query: 250 EYDEDESYGEVNRIIGSRALE 312
            Y+EDESYGEVN+IIGSRA E
Sbjct: 64  SYNEDESYGEVNKIIGSRAAE 84


>emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]
          Length = 373

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +1

Query: 73  SLSRLKFSPTPPVSTTNIAALPLPFPVQS-HLPPPLRPHSTFSLSATLESRPPPASQEFS 249
           SLSRLK SP P    T+++ LP   P+ S HL P  R + T S     E+      + F 
Sbjct: 9   SLSRLKLSPKP----TSLSPLP-SLPLHSLHLRPSRRFNLTVSQKQFEETEELLKDEVFD 63

Query: 250 EYDEDESYGEVNRIIGSRALE 312
            Y+EDESYGEV++IIGSRA E
Sbjct: 64  SYNEDESYGEVSKIIGSRAAE 84


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