BLASTX nr result
ID: Mentha27_contig00008879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00008879
(1421 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU42664.1| hypothetical protein MIMGU_mgv1a008163mg [Mimulus... 317 e-111
gb|EYU37704.1| hypothetical protein MIMGU_mgv1a006826mg [Mimulus... 290 e-105
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot... 287 e-105
ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP... 289 e-105
gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum] 285 e-104
ref|XP_006346456.1| PREDICTED: polyadenylate-binding protein RBP... 286 e-104
ref|NP_001275480.1| DNA binding protein ACBF-like [Solanum tuber... 286 e-104
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum] 282 e-103
ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]... 278 e-100
ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP... 278 e-100
gb|EPS57677.1| hypothetical protein M569_17140 [Genlisea aurea] 270 e-100
ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP... 276 e-100
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g... 276 2e-99
ref|XP_007042377.1| RNA-binding protein 47A [Theobroma cacao] gi... 288 6e-97
ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP... 290 8e-97
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 282 1e-96
ref|XP_006434827.1| hypothetical protein CICLE_v10001214mg [Citr... 286 1e-96
emb|CBI32444.3| unnamed protein product [Vitis vinifera] 292 2e-96
ref|XP_006473363.1| PREDICTED: polyadenylate-binding protein RBP... 284 4e-96
ref|XP_007017329.1| RNA-binding protein 47C isoform 1 [Theobroma... 282 8e-96
>gb|EYU42664.1| hypothetical protein MIMGU_mgv1a008163mg [Mimulus guttatus]
Length = 383
Score = 317 bits (812), Expect(2) = e-111
Identities = 159/207 (76%), Positives = 175/207 (84%)
Frame = +3
Query: 357 FRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTG 536
FRLNWAAFS GDRRPE+GSDLS+FVGDLA DVTDD+LHDTFASRYPSVK AKVV+D N G
Sbjct: 152 FRLNWAAFSAGDRRPESGSDLSVFVGDLATDVTDDLLHDTFASRYPSVKGAKVVIDPNNG 211
Query: 537 RSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKKXXXXXXXXXXXXXENESS 716
RSKGYGFVRF DENEKSRA+TEMNGV CSSRPMRIGVATPK+ EN+SS
Sbjct: 212 RSKGYGFVRFGDENEKSRAMTEMNGVYCSSRPMRIGVATPKR-PSPQQYSSQGQSENDSS 270
Query: 717 STTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFVQFEKRNDAEEAINKLNGT 896
+TTIFVGGLDS+VTD+ LRESFI FGEVVSVKIP G+GCGFVQF RN AE+AI +LNG
Sbjct: 271 NTTIFVGGLDSDVTDEDLRESFIPFGEVVSVKIPSGKGCGFVQFANRNSAEDAIQRLNGA 330
Query: 897 VIGKQKVRLSWGRSLNNKQQWRGDWNG 977
VIGKQ VRLSWGRSL N+ QW G++NG
Sbjct: 331 VIGKQTVRLSWGRSLGNR-QWNGNYNG 356
Score = 112 bits (281), Expect(2) = e-111
Identities = 53/68 (77%), Positives = 58/68 (85%)
Frame = +2
Query: 140 NQIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFN 319
+QIQ SGEDNKTIWIGDLQQWMDE YL +CFS +GEV SVKIIRN+ TGQS+RYGFIEF
Sbjct: 69 SQIQNSGEDNKTIWIGDLQQWMDEGYLQTCFSPSGEVHSVKIIRNKHTGQSERYGFIEFV 128
Query: 320 SHDAAENA 343
SH AE A
Sbjct: 129 SHSVAEKA 136
Score = 62.8 bits (151), Expect = 4e-07
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + L F S V K++ + +TG+S+ YGF+ F + +A+
Sbjct: 80 TIWIGDLQQWMDEGYLQTCF-SPSGEVHSVKIIRNKHTGQSERYGFIEFVSHSVAEKALQ 138
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG S + R+ A S ++FVG L ++VTDD+L
Sbjct: 139 SYNGTAMPNSDQFFRLNWAA---------FSAGDRRPESGSDLSVFVGDLATDVTDDLLH 189
Query: 774 ESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F ++ V K+ I +G GFV+F N+ A+ ++NG + +R+
Sbjct: 190 DTFASRYPSVKGAKVVIDPNNGRSKGYGFVRFGDENEKSRAMTEMNGVYCSSRPMRI 246
Score = 42.7 bits (99), Expect(2) = 6e-06
Identities = 28/96 (29%), Positives = 45/96 (46%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
P R + +S+ + S+ +IFVG L DVTD+ L ++F VV +
Sbjct: 251 PKRPSPQQYSSQGQSENDSSNTTIFVGGLDSDVTDEDLRESFI-------PFGEVVSVKI 303
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRI 641
KG GFV+F + N A+ +NG + +R+
Sbjct: 304 PSGKGCGFVQFANRNSAEDAIQRLNGAVIGKQTVRL 339
Score = 35.8 bits (81), Expect(2) = 6e-06
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 155 SGEDNKTIWIGDLQQWMDEDYLHSCF-SQTGEVLSVKIIRNRQTGQSDRYGFIEFNSHDA 331
SG D ++++GDL + +D LH F S+ V K++ + G+S YGF+ F +
Sbjct: 168 SGSD-LSVFVGDLATDVTDDLLHDTFASRYPSVKGAKVVIDPNNGRSKGYGFVRFGDENE 226
Query: 332 AENA 343
A
Sbjct: 227 KSRA 230
>gb|EYU37704.1| hypothetical protein MIMGU_mgv1a006826mg [Mimulus guttatus]
Length = 430
Score = 290 bits (742), Expect(2) = e-105
Identities = 150/232 (64%), Positives = 173/232 (74%), Gaps = 24/232 (10%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEA-------GSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAK 512
PFRLNWAAFS GDRRP+ GSDLSIFVGDLA DVTD +LHDTFASRYPS+K AK
Sbjct: 166 PFRLNWAAFSAGDRRPDIIPPPTTPGSDLSIFVGDLATDVTDALLHDTFASRYPSIKSAK 225
Query: 513 VVVDLNTGRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK---------- 662
VVVD N+GRSKGYGFVRF DENE++RA+TEMNGV CSSRPMR+GVATPK+
Sbjct: 226 VVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRVGVATPKRPSPQQPQYSS 285
Query: 663 -------XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPI 821
ENESS+TTIFVGGLDS+VTD+ LR++F+ GEV+SVKIP
Sbjct: 286 QAVVLAGGGFANGVVPQGQAENESSNTTIFVGGLDSDVTDEELRQAFVSSGEVISVKIPA 345
Query: 822 GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDWNG 977
G+GCGFVQF RN AE+A+ +LNG VIGKQ VRLSWGR++ NK Q+R D NG
Sbjct: 346 GKGCGFVQFANRNGAEDALERLNGAVIGKQTVRLSWGRNMGNK-QFRTDQNG 396
Score = 120 bits (302), Expect(2) = e-105
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +2
Query: 140 NQIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFN 319
NQIQ+S EDNKTIWIGDLQQWMD+ YL SCF+Q+GEV+SVKIIRN+QTGQS+RYGFIEFN
Sbjct: 84 NQIQSSAEDNKTIWIGDLQQWMDDGYLQSCFAQSGEVVSVKIIRNKQTGQSERYGFIEFN 143
Query: 320 SHDAAE 337
SH AAE
Sbjct: 144 SHAAAE 149
Score = 66.2 bits (160), Expect = 3e-08
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Frame = +3
Query: 405 AGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEK 584
A + +I++GDL + D L FA V K++ + TG+S+ YGF+ FN
Sbjct: 90 AEDNKTIWIGDLQQWMDDGYLQSCFAQS-GEVVSVKIIRNKQTGQSERYGFIEFNSHAAA 148
Query: 585 SRAVTEMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVT 758
+ + NG + +P R+ A S +IFVG L ++VT
Sbjct: 149 EKVLQSYNGTMMLNTEQPFRLNWAA--FSAGDRRPDIIPPPTTPGSDLSIFVGDLATDVT 206
Query: 759 DDMLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKV 917
D +L ++F ++ + S K+ + +G GFV+F N+ A+ ++NG + +
Sbjct: 207 DALLHDTFASRYPSIKSAKVVVDANSGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPM 266
Query: 918 RL 923
R+
Sbjct: 267 RV 268
>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
[Nicotiana plumbaginifolia]
Length = 428
Score = 287 bits (734), Expect(2) = e-105
Identities = 151/232 (65%), Positives = 168/232 (72%), Gaps = 24/232 (10%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTG++R E GSD SIFVGDLA DVTD ML DTFASRYPS+K AKVVVD NT
Sbjct: 156 PFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANT 215
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
G SKGYGFVRF DE+E+SRA+TEMNGV CSSR MRIGVATPKK
Sbjct: 216 GHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGG 275
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
+ +SS+TTIFVGGLDSEVTD+ LR+SF QFGEVVSVKIP G+GCGFV
Sbjct: 276 YASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFV 335
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQ-------QWRGDWNG 977
QF R+ A+EAI KL+G +IGKQ VRLSWGRS NKQ QW G +NG
Sbjct: 336 QFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNG 387
Score = 122 bits (307), Expect(2) = e-105
Identities = 55/65 (84%), Positives = 61/65 (93%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
QIQ+S EDNKTIWIGDLQQWMDE YLHSCFSQ GEV+SVKIIRN+QTGQS+RYGF+EFN+
Sbjct: 75 QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134
Query: 323 HDAAE 337
H AAE
Sbjct: 135 HAAAE 139
Score = 70.1 bits (170), Expect = 2e-09
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH F S+ V K++ + TG+S+ YGFV FN + +
Sbjct: 85 TIWIGDLQQWMDESYLHSCF-SQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 600 EMNGVQC--SSRPMRI---GVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDD 764
NG + +P R+ G +T +K S +IFVG L S+VTD
Sbjct: 144 SYNGTMMPNTEQPFRLNWAGFSTGEK------------RAETGSDFSIFVGDLASDVTDT 191
Query: 765 MLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
MLR++F ++ + K+ + +G GFV+F ++ A+ ++NG + +R+
Sbjct: 192 MLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 251
>ref|XP_004230808.1| PREDICTED: polyadenylate-binding protein RBP47-like [Solanum
lycopersicum]
Length = 413
Score = 289 bits (739), Expect(2) = e-105
Identities = 149/226 (65%), Positives = 167/226 (73%), Gaps = 17/226 (7%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWAAFS G++R E GSD SIFVGDLA DVTD ML DTFASRYPSVK AKVVVD NT
Sbjct: 148 PFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSVKGAKVVVDANT 207
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
G SKGYGFVRF DE+E+SRA+TEMNG+ CSSRPMR+GVATPKK
Sbjct: 208 GHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGG 267
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
+ +SS+TTIFVGGLDS+VTD+ LR+SF QFGEVVSVKIP G+GCGFV
Sbjct: 268 YASNGAATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFV 327
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDWNGG 980
QF R+ A+EAI KL+G VIGKQ VRLSWGRS +NKQ NGG
Sbjct: 328 QFSDRSSAQEAIQKLSGAVIGKQAVRLSWGRSPSNKQMRSDSGNGG 373
Score = 120 bits (302), Expect(2) = e-105
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
QIQ S EDNKTIWIGDLQQWMDE YLHSCFS GEV+SVKIIRN+QTGQS+RYGF+EFNS
Sbjct: 67 QIQNSSEDNKTIWIGDLQQWMDESYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNS 126
Query: 323 HDAAE 337
H AAE
Sbjct: 127 HAAAE 131
Score = 69.3 bits (168), Expect = 4e-09
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH F S V K++ + TG+S+ YGFV FN + +
Sbjct: 77 TIWIGDLQQWMDESYLHSCF-SHAGEVISVKIIRNKQTGQSERYGFVEFNSHAAAEKVLQ 135
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ A S +IFVG L S+VTD MLR
Sbjct: 136 SYNGTMMPNAEQPFRLNWAA---------FSAGEKRAETGSDFSIFVGDLASDVTDTMLR 186
Query: 774 ESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F ++ V K+ + +G GFV+F ++ A+ ++NG + +R+
Sbjct: 187 DTFASRYPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRV 243
>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 285 bits (728), Expect(2) = e-104
Identities = 149/232 (64%), Positives = 168/232 (72%), Gaps = 24/232 (10%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTG++R E GSD SIFVGDLA DVTD ML DTFASRYPS+K AKVVVD NT
Sbjct: 210 PFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANT 269
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
G SKGYGFVRF DE+E+SRA+TEMNGV CSSR MRIGVATPKK
Sbjct: 270 GHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGG 329
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
+ ++S+TTIFVGGLDS+VTD+ LR+SF QFGEVVSVKIP G+GCGFV
Sbjct: 330 YASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFV 389
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQ-------QWRGDWNG 977
QF R+ A+EAI KL+G +IGKQ VRLSWGRS NKQ QW G +NG
Sbjct: 390 QFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRADSGSQWNGGYNG 441
Score = 122 bits (307), Expect(2) = e-104
Identities = 55/65 (84%), Positives = 61/65 (93%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
QIQ+S EDNKTIWIGDLQQWMDE YLHSCFSQ GEV+SVKIIRN+QTGQS+RYGF+EFN+
Sbjct: 129 QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 188
Query: 323 HDAAE 337
H AAE
Sbjct: 189 HAAAE 193
Score = 70.1 bits (170), Expect = 2e-09
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH F S+ V K++ + TG+S+ YGFV FN + +
Sbjct: 139 TIWIGDLQQWMDESYLHSCF-SQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 197
Query: 600 EMNGVQC--SSRPMRI---GVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDD 764
NG + +P R+ G +T +K S +IFVG L S+VTD
Sbjct: 198 SYNGTMMPNAEQPFRLNWAGFSTGEK------------RAETGSDFSIFVGDLASDVTDT 245
Query: 765 MLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
MLR++F ++ + K+ + +G GFV+F ++ A+ ++NG + +R+
Sbjct: 246 MLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 305
>ref|XP_006346456.1| PREDICTED: polyadenylate-binding protein RBP47 [Solanum tuberosum]
Length = 420
Score = 286 bits (731), Expect(2) = e-104
Identities = 147/226 (65%), Positives = 166/226 (73%), Gaps = 17/226 (7%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWAAFS G++R E GSD SIFVGDLA DVTD ML DTFASR+PSVK AKVVVD NT
Sbjct: 155 PFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANT 214
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
G SKGYGFVRF DE+E+SRA+TEMNG+ CSSRPMR+GVATPKK
Sbjct: 215 GHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGG 274
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
+ +SS+TTIFVGGLDS+VTD+ LR+SF QFGEVVSVKIP G+GCGFV
Sbjct: 275 YASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFV 334
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDWNGG 980
QF R+ A+EAI KL+G +IGKQ VRLSWGRS NKQ NGG
Sbjct: 335 QFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGNGG 380
Score = 120 bits (300), Expect(2) = e-104
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
QIQ S EDNKTIWIGDLQQWMDE+YLHSCFS GEV+SVKIIRN+QTGQS+RYGF+EFN+
Sbjct: 74 QIQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNT 133
Query: 323 HDAAE 337
H AAE
Sbjct: 134 HAAAE 138
Score = 70.5 bits (171), Expect = 2e-09
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + ++ LH F S V K++ + TG+S+ YGFV FN + +
Sbjct: 84 TIWIGDLQQWMDENYLHSCF-SHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 142
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ A S +IFVG L S+VTD MLR
Sbjct: 143 SYNGTMMPNAEQPFRLNWAA---------FSAGEKRAETGSDFSIFVGDLASDVTDTMLR 193
Query: 774 ESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F +F V K+ + +G GFV+F ++ A+ ++NG + +R+
Sbjct: 194 DTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRV 250
>ref|NP_001275480.1| DNA binding protein ACBF-like [Solanum tuberosum]
gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like
[Solanum tuberosum]
Length = 372
Score = 286 bits (731), Expect(2) = e-104
Identities = 147/226 (65%), Positives = 166/226 (73%), Gaps = 17/226 (7%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWAAFS G++R E GSD SIFVGDLA DVTD ML DTFASR+PSVK AKVVVD NT
Sbjct: 105 PFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANT 164
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
G SKGYGFVRF DE+E+SRA+TEMNG+ CSSRPMR+GVATPKK
Sbjct: 165 GHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQQQFSSQAVILSGG 224
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
+ +SS+TTIFVGGLDS+VTD+ LR+SF QFGEVVSVKIP G+GCGFV
Sbjct: 225 YASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFV 284
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDWNGG 980
QF R+ A+EAI KL+G +IGKQ VRLSWGRS NKQ NGG
Sbjct: 285 QFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGNGG 330
Score = 120 bits (300), Expect(2) = e-104
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
QIQ S EDNKTIWIGDLQQWMDE+YLHSCFS GEV+SVKIIRN+QTGQS+RYGF+EFN+
Sbjct: 24 QIQNSSEDNKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNT 83
Query: 323 HDAAE 337
H AAE
Sbjct: 84 HAAAE 88
Score = 70.5 bits (171), Expect = 2e-09
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + ++ LH F S V K++ + TG+S+ YGFV FN + +
Sbjct: 34 TIWIGDLQQWMDENYLHSCF-SHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 92
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ A S +IFVG L S+VTD MLR
Sbjct: 93 SYNGTMMPNAEQPFRLNWAA---------FSAGEKRAETGSDFSIFVGDLASDVTDTMLR 143
Query: 774 ESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F +F V K+ + +G GFV+F ++ A+ ++NG + +R+
Sbjct: 144 DTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRV 200
>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 282 bits (721), Expect(2) = e-103
Identities = 146/231 (63%), Positives = 167/231 (72%), Gaps = 23/231 (9%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTG++R E GSD SIFVGDLA DVTD ML DTFASRYPS+K AKVVVD NT
Sbjct: 156 PFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANT 215
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
G SKGYGFVRF DE+E+SRA+TEMNGV CSSR MRIGVATPKK
Sbjct: 216 GHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGG 275
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
+ ++S+TTIFVGGLDS+VTD+ LR+SF QFGEVVSVKIP G+GCGFV
Sbjct: 276 YASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFV 335
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNK------QQWRGDWNG 977
QF R+ A+EAI KL+G +IGKQ VRLSWGR+ N + QW G +NG
Sbjct: 336 QFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRTANKQMRADSGSQWNGGYNG 386
Score = 122 bits (307), Expect(2) = e-103
Identities = 55/65 (84%), Positives = 61/65 (93%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
QIQ+S EDNKTIWIGDLQQWMDE YLHSCFSQ GEV+SVKIIRN+QTGQS+RYGF+EFN+
Sbjct: 75 QIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNT 134
Query: 323 HDAAE 337
H AAE
Sbjct: 135 HAAAE 139
Score = 70.1 bits (170), Expect = 2e-09
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH F S+ V K++ + TG+S+ YGFV FN + +
Sbjct: 85 TIWIGDLQQWMDESYLHSCF-SQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 600 EMNGVQC--SSRPMRI---GVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDD 764
NG + +P R+ G +T +K S +IFVG L S+VTD
Sbjct: 144 SYNGTMMPNAEQPFRLNWAGFSTGEK------------RAETGSDFSIFVGDLASDVTDT 191
Query: 765 MLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
MLR++F ++ + K+ + +G GFV+F ++ A+ ++NG + +R+
Sbjct: 192 MLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 251
>ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]
gi|82621116|gb|ABB86246.1| DNA-binding protein-like
[Solanum tuberosum]
Length = 423
Score = 278 bits (712), Expect(2) = e-100
Identities = 148/231 (64%), Positives = 174/231 (75%), Gaps = 22/231 (9%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPE------AGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKV 515
PFRLNW+AFSTG++R + +GSDLSIFVGDLA DVTD ML DTF+SRYPSVK AKV
Sbjct: 151 PFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKV 210
Query: 516 VVDLNTGRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------- 662
V+D NTGRSKGYGFVRF+DE+E+SRA+TEMNG+ CSSR MRIGVATPKK
Sbjct: 211 VIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQG 270
Query: 663 -XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGF 839
+++ S+TT+FVGGLDS+VTD+ LR+SF QFG VVSVKIP G+GCGF
Sbjct: 271 GHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCGF 330
Query: 840 VQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNGG 980
VQF +R+ AE+AI KLNGTVIG Q VRLSWGR+ NK Q+R D WNGG
Sbjct: 331 VQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANK-QFRTDSGSQWNGG 380
Score = 116 bits (290), Expect(2) = e-100
Identities = 52/66 (78%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 QIQASG-EDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFN 319
QIQ +G EDN+TIWIGDLQQWMDE YLH+CF+Q GEV+SVK+IRN+QTGQS+RYGFIEFN
Sbjct: 69 QIQQNGSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFN 128
Query: 320 SHDAAE 337
+H+AAE
Sbjct: 129 THEAAE 134
Score = 70.9 bits (172), Expect = 1e-09
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH FA V KV+ + TG+S+ YGF+ FN + +
Sbjct: 80 TIWIGDLQQWMDEGYLHTCFAQA-GEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ + S +IFVG L S+VTD MLR
Sbjct: 139 SYNGTMMPNAEQPFRLNWSA---FSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLR 195
Query: 774 ESF-IQFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F ++ V K+ I +G GFV+F+ ++ A+ ++NG + +R+
Sbjct: 196 DTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRI 252
>ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X2 [Solanum
tuberosum]
Length = 424
Score = 278 bits (711), Expect(2) = e-100
Identities = 148/232 (63%), Positives = 174/232 (75%), Gaps = 23/232 (9%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPE------AGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKV 515
PFRLNW+AFSTG++R + +GSDLSIFVGDLA DVTD ML DTF+SRYPSVK AKV
Sbjct: 151 PFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKV 210
Query: 516 VVDLNTGRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------- 662
V+D NTGRSKGYGFVRF+DE+E+SRA+TEMNG+ CSSR MRIGVATPKK
Sbjct: 211 VIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQA 270
Query: 663 --XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCG 836
+++ S+TT+FVGGLDS+VTD+ LR+SF QFG VVSVKIP G+GCG
Sbjct: 271 GGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCG 330
Query: 837 FVQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNGG 980
FVQF +R+ AE+AI KLNGTVIG Q VRLSWGR+ NK Q+R D WNGG
Sbjct: 331 FVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANK-QFRTDSGSQWNGG 381
Score = 116 bits (290), Expect(2) = e-100
Identities = 52/66 (78%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 QIQASG-EDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFN 319
QIQ +G EDN+TIWIGDLQQWMDE YLH+CF+Q GEV+SVK+IRN+QTGQS+RYGFIEFN
Sbjct: 69 QIQQNGSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFN 128
Query: 320 SHDAAE 337
+H+AAE
Sbjct: 129 THEAAE 134
Score = 70.9 bits (172), Expect = 1e-09
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH FA V KV+ + TG+S+ YGF+ FN + +
Sbjct: 80 TIWIGDLQQWMDEGYLHTCFAQA-GEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ + S +IFVG L S+VTD MLR
Sbjct: 139 SYNGTMMPNAEQPFRLNWSA---FSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLR 195
Query: 774 ESF-IQFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F ++ V K+ I +G GFV+F+ ++ A+ ++NG + +R+
Sbjct: 196 DTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRI 252
>gb|EPS57677.1| hypothetical protein M569_17140 [Genlisea aurea]
Length = 414
Score = 270 bits (689), Expect(2) = e-100
Identities = 137/222 (61%), Positives = 165/222 (74%), Gaps = 15/222 (6%)
Frame = +3
Query: 357 FRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTG 536
FRLNWA+FSTGDR P++GSDLSIFVGDLA DVTD+ML +TFASRYPSVK AKVVVD ++G
Sbjct: 165 FRLNWASFSTGDRLPDSGSDLSIFVGDLATDVTDEMLTETFASRYPSVKGAKVVVDGSSG 224
Query: 537 RSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK---------------XXX 671
RSKGYGFVRF DE E+ RA++EMNG CS+RPMR+G ATPKK
Sbjct: 225 RSKGYGFVRFGDEGERDRAMSEMNGEYCSNRPMRVGAATPKKSSTNQQFSSQAVILAGGC 284
Query: 672 XXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFVQFE 851
E + S+TTIFVGGLDS+V+D+ LR+ F +GE+VSVKIP G+GCGFVQF
Sbjct: 285 ANGVAPRVQPETDPSNTTIFVGGLDSDVSDEELRQCFTPYGEIVSVKIPPGKGCGFVQFT 344
Query: 852 KRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDWNG 977
R +AE+A+ +LNG+VIGKQ VRLSWGR++ NKQ D NG
Sbjct: 345 DRINAEDALERLNGSVIGKQAVRLSWGRNMANKQSRSSDGNG 386
Score = 124 bits (310), Expect(2) = e-100
Identities = 55/66 (83%), Positives = 64/66 (96%)
Frame = +2
Query: 140 NQIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFN 319
+QIQA+GEDNKTIWIGDLQQWMDE+YLHSCFSQTGEV+SVK+IRN+QTGQS++YGF+EF
Sbjct: 82 SQIQATGEDNKTIWIGDLQQWMDENYLHSCFSQTGEVVSVKVIRNKQTGQSEKYGFVEFI 141
Query: 320 SHDAAE 337
SH AAE
Sbjct: 142 SHGAAE 147
Score = 66.6 bits (161), Expect = 3e-08
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Frame = +3
Query: 393 RRPEAGSDL--------SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKG 548
R P+ GS + +I++GDL + ++ LH F S+ V KV+ + TG+S+
Sbjct: 76 RPPKQGSQIQATGEDNKTIWIGDLQQWMDENYLHSCF-SQTGEVVSVKVIRNKQTGQSEK 134
Query: 549 YGFVRFNDENEKSRAVTEMNG--VQCSSRPMRIGVATPKKXXXXXXXXXXXXXENESSST 722
YGFV F + + NG + + + R+ A+ + S
Sbjct: 135 YGFVEFISHGAAEKVLQSYNGSTMPNTDQQFRLNWAS---------FSTGDRLPDSGSDL 185
Query: 723 TIFVGGLDSEVTDDMLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAIN 881
+IFVG L ++VTD+ML E+F ++ V K+ + +G GFV+F + + A++
Sbjct: 186 SIFVGDLATDVTDEMLTETFASRYPSVKGAKVVVDGSSGRSKGYGFVRFGDEGERDRAMS 245
Query: 882 KLNGTVIGKQKVRL 923
++NG + +R+
Sbjct: 246 EMNGEYCSNRPMRV 259
>ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X1 [Solanum
tuberosum]
Length = 428
Score = 276 bits (707), Expect(2) = e-100
Identities = 148/236 (62%), Positives = 174/236 (73%), Gaps = 27/236 (11%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPE------AGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKV 515
PFRLNW+AFSTG++R + +GSDLSIFVGDLA DVTD ML DTF+SRYPSVK AKV
Sbjct: 151 PFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKV 210
Query: 516 VVDLNTGRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------- 662
V+D NTGRSKGYGFVRF+DE+E+SRA+TEMNG+ CSSR MRIGVATPKK
Sbjct: 211 VIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQA 270
Query: 663 ------XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIG 824
+++ S+TT+FVGGLDS+VTD+ LR+SF QFG VVSVKIP G
Sbjct: 271 VILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAG 330
Query: 825 RGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNGG 980
+GCGFVQF +R+ AE+AI KLNGTVIG Q VRLSWGR+ NK Q+R D WNGG
Sbjct: 331 KGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANK-QFRTDSGSQWNGG 385
Score = 116 bits (290), Expect(2) = e-100
Identities = 52/66 (78%), Positives = 62/66 (93%), Gaps = 1/66 (1%)
Frame = +2
Query: 143 QIQASG-EDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFN 319
QIQ +G EDN+TIWIGDLQQWMDE YLH+CF+Q GEV+SVK+IRN+QTGQS+RYGFIEFN
Sbjct: 69 QIQQNGSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFN 128
Query: 320 SHDAAE 337
+H+AAE
Sbjct: 129 THEAAE 134
Score = 70.9 bits (172), Expect = 1e-09
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH FA V KV+ + TG+S+ YGF+ FN + +
Sbjct: 80 TIWIGDLQQWMDEGYLHTCFAQA-GEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ + S +IFVG L S+VTD MLR
Sbjct: 139 SYNGTMMPNAEQPFRLNWSA---FSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLR 195
Query: 774 ESF-IQFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F ++ V K+ I +G GFV+F+ ++ A+ ++NG + +R+
Sbjct: 196 DTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRI 252
>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum
lycopersicum]
Length = 428
Score = 276 bits (706), Expect(2) = 2e-99
Identities = 148/236 (62%), Positives = 174/236 (73%), Gaps = 27/236 (11%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPE------AGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKV 515
PFRLNW+AFS+G++R + +GSDLSIFVGDLA DVTD ML DTF+SRYPSVK AKV
Sbjct: 151 PFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKV 210
Query: 516 VVDLNTGRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------- 662
V+D NTGRSKGYGFVRF+DE+E+SRA+TEMNG+ CSSR MRIGVATPKK
Sbjct: 211 VIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQA 270
Query: 663 ------XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIG 824
+++ S+TT+FVGGLDSEVTD+ LR+SF QFG VVSVKIP G
Sbjct: 271 VILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAG 330
Query: 825 RGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNGG 980
+GCGFVQF +R+ AE+AI KLNGTVIG Q VRLSWGR+ NK Q+R D WNGG
Sbjct: 331 KGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANK-QFRTDSGSQWNGG 385
Score = 115 bits (287), Expect(2) = 2e-99
Identities = 59/112 (52%), Positives = 69/112 (61%)
Frame = +2
Query: 2 AMQQYQQWWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNQIQASGEDNKTIW 181
AMQQYQQ W + Q AS EDN+TIW
Sbjct: 24 AMQQYQQQWMAMQQYPPAAAMVMQQQMMYGQQYMPYYHQQHQQMIQIQQNAS-EDNRTIW 82
Query: 182 IGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNSHDAAE 337
IGDLQQWMDE YLH+CF+Q GEV+SVK+IRN+QTGQS+RYGFIEFN+H+AAE
Sbjct: 83 IGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAE 134
Score = 70.9 bits (172), Expect = 1e-09
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I++GDL + + LH FA V KV+ + TG+S+ YGF+ FN + +
Sbjct: 80 TIWIGDLQQWMDEGYLHTCFAQA-GEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + +P R+ + S +IFVG L S+VTD MLR
Sbjct: 139 SYNGTMMPNAEQPFRLNWSA---FSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLR 195
Query: 774 ESF-IQFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
++F ++ V K+ I +G GFV+F+ ++ A+ ++NG + +R+
Sbjct: 196 DTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRI 252
>ref|XP_007042377.1| RNA-binding protein 47A [Theobroma cacao]
gi|508706312|gb|EOX98208.1| RNA-binding protein 47A
[Theobroma cacao]
Length = 436
Score = 288 bits (737), Expect(2) = 6e-97
Identities = 148/231 (64%), Positives = 172/231 (74%), Gaps = 22/231 (9%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA+FS +RR +AGSDLSIFVGDLA DVTD +LH+TF+ R+ SVK AKVV+D NT
Sbjct: 173 PFRLNWASFSVTERRSDAGSDLSIFVGDLAADVTDTILHETFSGRFQSVKGAKVVIDSNT 232
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
GRSKGYGFVRF+DENE+SRA+TEMNGV CSSRPMRIGVATPKK
Sbjct: 233 GRSKGYGFVRFSDENERSRAMTEMNGVYCSSRPMRIGVATPKKASGYQQQYSSQALVLAG 292
Query: 663 -XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGF 839
+N+S++ TIFVGGLDS+V+DD LR+ F QFG+++SVKIP G+GCGF
Sbjct: 293 GHGSNGAVAQGSQSDNDSNNATIFVGGLDSDVSDDDLRQPFSQFGDIISVKIPPGKGCGF 352
Query: 840 VQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNGG 980
VQF R +AE+AI LNGT IGKQ VRLSWGRSL NK QWRGD WNGG
Sbjct: 353 VQFANRKNAEDAIQSLNGTTIGKQTVRLSWGRSLGNK-QWRGDSGNQWNGG 402
Score = 95.1 bits (235), Expect(2) = 6e-97
Identities = 47/68 (69%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +2
Query: 137 RNQIQASGEDN-KTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIE 313
+ Q Q S D KTIW+GDL WMDE YLH CFS TGEV SVKIIRN+QTGQS+ YGFIE
Sbjct: 89 QKQQQGSNTDEVKTIWVGDLVHWMDETYLHGCFSHTGEVSSVKIIRNKQTGQSEGYGFIE 148
Query: 314 FNSHDAAE 337
F S AAE
Sbjct: 149 FYSRAAAE 156
Score = 72.0 bits (175), Expect = 6e-10
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I+VGDL + + LH F S V K++ + TG+S+GYGF+ F + +
Sbjct: 102 TIWVGDLVHWMDETYLHGCF-SHTGEVSSVKIIRNKQTGQSEGYGFIEFYSRAAAEKVLQ 160
Query: 600 EMNG--VQCSSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + + +P R+ A+ + S +IFVG L ++VTD +L
Sbjct: 161 SFNGSLMPNTEQPFRLNWAS---------FSVTERRSDAGSDLSIFVGDLAADVTDTILH 211
Query: 774 ESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
E+F +F V K+ I +G GFV+F N+ A+ ++NG + +R+
Sbjct: 212 ETFSGRFQSVKGAKVVIDSNTGRSKGYGFVRFSDENERSRAMTEMNGVYCSSRPMRI 268
>ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 290 bits (742), Expect(2) = 8e-97
Identities = 149/231 (64%), Positives = 174/231 (75%), Gaps = 21/231 (9%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FS DRRP+ GSDLSIFVGDLA DVTD +L +TF+SRY SVK AKVV+D N+
Sbjct: 172 PFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNS 231
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
GRSKGYGFVRF DENE++RA+TEMNG+ CSSRPMRIGVATPKK
Sbjct: 232 GRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAG 291
Query: 663 XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFV 842
++ES++TTIFVGGLDS+V+D+ L+++F +FG+VVSVKIPIG+GCGFV
Sbjct: 292 GHPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFV 351
Query: 843 QFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNGGR 983
QF R +AE+AI LNGTVIGKQ VRLSWGRS NK QWRGD WNGGR
Sbjct: 352 QFANRKNAEDAIQGLNGTVIGKQTVRLSWGRSTGNK-QWRGDSNNQWNGGR 401
Score = 92.8 bits (229), Expect(2) = 8e-97
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +2
Query: 137 RNQIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEF 316
R + Q S ++ KT+WIGDLQ WMDE YL++CF+ TGEV SVK+I N+QTGQS+ YGF+EF
Sbjct: 89 RPRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEF 148
Query: 317 NSHDAAE 337
SH AE
Sbjct: 149 FSHTTAE 155
Score = 70.9 bits (172), Expect = 1e-09
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
++++GDL P + + L++ FA V KV+ + TG+S+GYGFV F + +
Sbjct: 101 TLWIGDLQPWMDETYLNNCFAHT-GEVSSVKVICNKQTGQSEGYGFVEFFSHTTAEKVLQ 159
Query: 600 EMNG--VQCSSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + + P R+ AT + S +IFVG L ++VTD +L+
Sbjct: 160 NYNGTIMPNTELPFRLNWAT---------FSANDRRPDTGSDLSIFVGDLAADVTDAILQ 210
Query: 774 ESF-IQFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
E+F ++ V K+ I +G GFV+F N+ A+ ++NG + +R+
Sbjct: 211 ETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRI 267
>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 282 bits (722), Expect(2) = 1e-96
Identities = 141/218 (64%), Positives = 167/218 (76%), Gaps = 8/218 (3%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FS GD+R + G DLSIFVGDLA DV+D +LH+TFA +YPSVK AKVV D NT
Sbjct: 156 PFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANT 215
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK-XXXXXXXXXXXXXENE 710
GRSKGYGFVRF DENE+S+A+TEMNGV CSSRPMRIG ATP+K + +
Sbjct: 216 GRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHVQSDGD 275
Query: 711 SSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFVQFEKRNDAEEAINKLN 890
S +TTIFVGGLD V+D+ LR+ F Q+GE+VSVKIP+G+GCGFVQF RN+AE+A+ KLN
Sbjct: 276 SMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLN 335
Query: 891 GTVIGKQKVRLSWGRSLNNKQ-------QWRGDWNGGR 983
GTVIGKQ VRLSWGR+ NKQ QW G + GG+
Sbjct: 336 GTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQ 373
Score = 100 bits (248), Expect(2) = 1e-96
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = +2
Query: 143 QIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNS 322
Q Q S DN+TIW+GDL WMDE+YLHSCF+ TGE+ S+K+IRN+QTG S+ YGF+EF S
Sbjct: 75 QQQGSNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFS 134
Query: 323 HDAAE 337
H AAE
Sbjct: 135 HAAAE 139
Score = 66.6 bits (161), Expect = 3e-08
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+I+VGDL + ++ LH FA+ + KV+ + TG S+GYGFV F + +
Sbjct: 85 TIWVGDLHNWMDENYLHSCFAAT-GELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 600 EMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
GV + +P R+ AT + +IFVG L S+V+D +L
Sbjct: 144 GYAGVLMPNTDQPFRLNWAT---------FSMGDKRSDNGPDLSIFVGDLASDVSDSLLH 194
Query: 774 ESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
E+F ++ V + K+ +G GFV+F N+ +A+ ++NG + +R+
Sbjct: 195 ETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRI 251
>ref|XP_006434827.1| hypothetical protein CICLE_v10001214mg [Citrus clementina]
gi|557536949|gb|ESR48067.1| hypothetical protein
CICLE_v10001214mg [Citrus clementina]
Length = 432
Score = 286 bits (731), Expect(2) = 1e-96
Identities = 146/230 (63%), Positives = 169/230 (73%), Gaps = 20/230 (8%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTGD+R + G DLSIFVGDLA DVTD +LH+TFASRYPSVK AKVV D NT
Sbjct: 164 PFRLNWATFSTGDKRSDNGPDLSIFVGDLAADVTDSLLHETFASRYPSVKAAKVVFDANT 223
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK-------------XXXX 674
GRSKGYGFVRF D+NE+S+A+TEMNGV CSSRPMRIG ATP+K
Sbjct: 224 GRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN 283
Query: 675 XXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFVQFEK 854
E +SS+TTIFVGGLD VTD+ LR+ F Q+GE+ SVKIP+G+GCGFVQF
Sbjct: 284 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 343
Query: 855 RNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQ-------QWRGDWNGGR 983
R +AEEA++KLNGTVIGKQ VRLSWGR+ NKQ QW G + GG+
Sbjct: 344 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 393
Score = 96.3 bits (238), Expect(2) = 1e-96
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = +2
Query: 152 ASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNSHDA 331
+ G +NKTIW+GDL WMDE+YLHSCF+ TGE+ S+K+IRN+QTG S+ YGF+EF +H
Sbjct: 86 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 145
Query: 332 AE 337
AE
Sbjct: 146 AE 147
Score = 68.2 bits (165), Expect = 9e-09
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Frame = +3
Query: 408 GSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKS 587
G + +I+VGDL + ++ LH FAS + KV+ + TG S+GYGFV F
Sbjct: 89 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 147
Query: 588 RAVTEMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTD 761
+ + + + +P R+ AT + +IFVG L ++VTD
Sbjct: 148 KVLQSYTSILMPNTDQPFRLNWAT---------FSTGDKRSDNGPDLSIFVGDLAADVTD 198
Query: 762 DMLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVR 920
+L E+F ++ V + K+ +G GFV+F N+ +A+ ++NG + +R
Sbjct: 199 SLLHETFASRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMR 258
Query: 921 L 923
+
Sbjct: 259 I 259
>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 292 bits (747), Expect(2) = 2e-96
Identities = 152/230 (66%), Positives = 171/230 (74%), Gaps = 22/230 (9%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTGDRR +AGSDLSIFVGDLA DVTD +L +TFA+RYPSVK AKVV D NT
Sbjct: 81 PFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNT 140
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------------- 662
GRSKGYGFVRF DENE+SRA+ EMNG+ CSSRPMRIGVATPKK
Sbjct: 141 GRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAG 200
Query: 663 -XXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGF 839
+S++TTIFVGGLDSEVTD+ LR+SF QFGEVVSVKIP+G+GCGF
Sbjct: 201 GNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGF 260
Query: 840 VQFEKRNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD----WNG 977
VQF RN AE+A+ +LNGTVIGKQ VRLSWGR+ +K QWR D WNG
Sbjct: 261 VQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASK-QWRNDSNNQWNG 309
Score = 89.4 bits (220), Expect(2) = 2e-96
Identities = 38/64 (59%), Positives = 50/64 (78%)
Frame = +2
Query: 146 IQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNSH 325
+ S ++ KT+W+GDL QWMD++YL +CF TGEV S+KIIRN+QTGQS+ YGF+EF S
Sbjct: 1 MHGSTDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSR 60
Query: 326 DAAE 337
AE
Sbjct: 61 ATAE 64
Score = 68.2 bits (165), Expect = 9e-09
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Frame = +3
Query: 420 SIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKSRAVT 599
+++VGDL + D+ L F V K++ + TG+S+GYGFV F + +
Sbjct: 10 TLWVGDLHQWMDDNYLRTCFGHT-GEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILH 68
Query: 600 EMNG--VQCSSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTDDMLR 773
NG + + +P R+ AT + S +IFVG L S+VTD +L+
Sbjct: 69 SYNGTLMPNTEQPFRLNWAT---------FSTGDRRTDAGSDLSIFVGDLASDVTDALLQ 119
Query: 774 ESF-IQFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVRL 923
E+F ++ V K+ +G GFV+F N+ A+N++NG + +R+
Sbjct: 120 ETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRI 176
>ref|XP_006473363.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Citrus
sinensis]
Length = 433
Score = 284 bits (727), Expect(2) = 4e-96
Identities = 145/230 (63%), Positives = 168/230 (73%), Gaps = 20/230 (8%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTGD+R + G DLSIFVGDLA DVTD +LH+TFASRYPSVK AKVV D NT
Sbjct: 165 PFRLNWATFSTGDKRSDNGPDLSIFVGDLAADVTDSLLHETFASRYPSVKAAKVVFDANT 224
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK-------------XXXX 674
GRSKGYGFVRF D+NE+S+A+TEMNG CSSRPMRIG ATP+K
Sbjct: 225 GRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN 284
Query: 675 XXXXXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFVQFEK 854
E +SS+TTIFVGGLD VTD+ LR+ F Q+GE+ SVKIP+G+GCGFVQF
Sbjct: 285 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 344
Query: 855 RNDAEEAINKLNGTVIGKQKVRLSWGRSLNNKQ-------QWRGDWNGGR 983
R +AEEA++KLNGTVIGKQ VRLSWGR+ NKQ QW G + GG+
Sbjct: 345 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 394
Score = 96.3 bits (238), Expect(2) = 4e-96
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = +2
Query: 152 ASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEFNSHDA 331
+ G +NKTIW+GDL WMDE+YLHSCF+ TGE+ S+K+IRN+QTG S+ YGF+EF +H
Sbjct: 87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
Query: 332 AE 337
AE
Sbjct: 147 AE 148
Score = 68.2 bits (165), Expect = 9e-09
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Frame = +3
Query: 408 GSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKS 587
G + +I+VGDL + ++ LH FAS + KV+ + TG S+GYGFV F
Sbjct: 90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
Query: 588 RAVTEMNGVQC--SSRPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTD 761
+ + + + +P R+ AT + +IFVG L ++VTD
Sbjct: 149 KVLQSYTSILMPNTDQPFRLNWAT---------FSTGDKRSDNGPDLSIFVGDLAADVTD 199
Query: 762 DMLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVR 920
+L E+F ++ V + K+ +G GFV+F N+ +A+ ++NG + +R
Sbjct: 200 SLLHETFASRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGAYCSSRPMR 259
Query: 921 L 923
+
Sbjct: 260 I 260
>ref|XP_007017329.1| RNA-binding protein 47C isoform 1 [Theobroma cacao]
gi|508722657|gb|EOY14554.1| RNA-binding protein 47C
isoform 1 [Theobroma cacao]
Length = 435
Score = 282 bits (721), Expect(2) = 8e-96
Identities = 143/227 (62%), Positives = 169/227 (74%), Gaps = 17/227 (7%)
Frame = +3
Query: 354 PFRLNWAAFSTGDRRPEAGSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNT 533
PFRLNWA FSTG++R E G DLSIFVGDLA DVTD +LH+TFAS+Y SVK AKVV+D NT
Sbjct: 170 PFRLNWATFSTGEKRSENGPDLSIFVGDLAADVTDSLLHETFASKYSSVKAAKVVIDANT 229
Query: 534 GRSKGYGFVRFNDENEKSRAVTEMNGVQCSSRPMRIGVATPKK----------XXXXXXX 683
GRSKGYGFVRF D+ E+S+A+TEMNGV CSSRPMRIG ATP+K
Sbjct: 230 GRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN 289
Query: 684 XXXXXXENESSSTTIFVGGLDSEVTDDMLRESFIQFGEVVSVKIPIGRGCGFVQFEKRND 863
+ +SS+TTIFVGGLD VT++ LR+ F Q+GE+VSVKIP+G+GCGFVQF RN+
Sbjct: 290 GASNQSDGDSSNTTIFVGGLDPNVTEEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNN 349
Query: 864 AEEAINKLNGTVIGKQKVRLSWGRSLNNKQ-------QWRGDWNGGR 983
AEEA+ KLNGTVIGKQ VRLSWGR+ NKQ QW G + GG+
Sbjct: 350 AEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 396
Score = 97.4 bits (241), Expect(2) = 8e-96
Identities = 40/67 (59%), Positives = 52/67 (77%)
Frame = +2
Query: 137 RNQIQASGEDNKTIWIGDLQQWMDEDYLHSCFSQTGEVLSVKIIRNRQTGQSDRYGFIEF 316
+ Q G +NKT+W+GDL WMDE+YLHSCF+ TGE+ S+K+IRN+QTG S+ YGF+EF
Sbjct: 87 QQQGSGGGGENKTVWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEF 146
Query: 317 NSHDAAE 337
SH AE
Sbjct: 147 FSHATAE 153
Score = 69.7 bits (169), Expect = 3e-09
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Frame = +3
Query: 408 GSDLSIFVGDLAPDVTDDMLHDTFASRYPSVKDAKVVVDLNTGRSKGYGFVRFNDENEKS 587
G + +++VGDL + ++ LH FAS + KV+ + TG S+GYGFV F
Sbjct: 95 GENKTVWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFSHATAE 153
Query: 588 RAVTEMNGVQCSS--RPMRIGVATPKKXXXXXXXXXXXXXENESSSTTIFVGGLDSEVTD 761
+ + G+ + +P R+ AT +IFVG L ++VTD
Sbjct: 154 KVLQNYGGILMPNMEQPFRLNWAT---------FSTGEKRSENGPDLSIFVGDLAADVTD 204
Query: 762 DMLRESFI-QFGEVVSVKIPI------GRGCGFVQFEKRNDAEEAINKLNGTVIGKQKVR 920
+L E+F ++ V + K+ I +G GFV+F + +A+ ++NG + +R
Sbjct: 205 SLLHETFASKYSSVKAAKVVIDANTGRSKGYGFVRFGDDTERSQAMTEMNGVYCSSRPMR 264
Query: 921 L 923
+
Sbjct: 265 I 265