BLASTX nr result

ID: Mentha27_contig00007208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00007208
         (225 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18382.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus...    74   3e-11
gb|EYU18381.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus...    74   3e-11
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...    55   8e-06

>gb|EYU18382.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus guttatus]
          Length = 642

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = +2

Query: 74  ANGVAGQYR----DSPVVTQTASDDAYSFNQTSTSRDAGNYGRYLTFNVASSTK 223
           ANG  G+Y     +SP VTQTASDDAYS+NQTSTSR+A NYG YLTF VASS+K
Sbjct: 47  ANGAVGRYHHQNNNSPAVTQTASDDAYSYNQTSTSRNAVNYGGYLTFAVASSSK 100


>gb|EYU18381.1| hypothetical protein MIMGU_mgv1a002733mg [Mimulus guttatus]
          Length = 637

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = +2

Query: 74  ANGVAGQYR----DSPVVTQTASDDAYSFNQTSTSRDAGNYGRYLTFNVASSTK 223
           ANG  G+Y     +SP VTQTASDDAYS+NQTSTSR+A NYG YLTF VASS+K
Sbjct: 47  ANGAVGRYHHQNNNSPAVTQTASDDAYSYNQTSTSRNAVNYGGYLTFAVASSSK 100


>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
           gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
           protein Virp1a [Solanum lycopersicum]
           gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
           protein Virp1b [Solanum lycopersicum]
           gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
           protein Virp1c [Solanum lycopersicum]
           gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
           protein Virp1d [Solanum lycopersicum]
           gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
           gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
           Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
           PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
 Frame = +2

Query: 101 DSPVVTQTASDDAYSFNQ----TSTSRDAGNYGRYLTFNVASSTK 223
           DSP VTQTASDDAYSFNQ    ++T+ D  N+G YLTFNV S  K
Sbjct: 61  DSPAVTQTASDDAYSFNQRPIESTTNVDGLNFGGYLTFNVVSYNK 105


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