BLASTX nr result
ID: Mentha27_contig00006471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00006471
(301 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006402306.1| hypothetical protein EUTSA_v10006498mg [Eutr... 82 1e-13
ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabi... 79 5e-13
ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Caps... 78 1e-12
ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 ... 78 1e-12
ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 ... 78 1e-12
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc... 78 1e-12
ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arab... 77 3e-12
gb|EPS64566.1| hypothetical protein M569_10212 [Genlisea aurea] 76 4e-12
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian... 76 4e-12
ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding pro... 76 6e-12
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro... 76 6e-12
ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro... 76 6e-12
ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula] g... 76 6e-12
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g... 76 6e-12
gb|ACU24107.1| unknown [Glycine max] 76 6e-12
gb|ACU24035.1| unknown [Glycine max] 76 6e-12
ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140... 76 6e-12
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis] 75 1e-11
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr... 75 1e-11
ref|XP_007199894.1| hypothetical protein PRUPE_ppa006606mg [Prun... 75 1e-11
>ref|XP_006402306.1| hypothetical protein EUTSA_v10006498mg [Eutrema salsugineum]
gi|557103405|gb|ESQ43759.1| hypothetical protein
EUTSA_v10006498mg [Eutrema salsugineum]
Length = 402
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -1
Query: 133 FTIKAEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA KKNVLIVNTNSGGHAVIGFYFAKELL++GH+VTI TVG
Sbjct: 69 FTVKAHKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTIFTVG 112
>ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1
AT3g63140/T20O10_240 [Arabidopsis thaliana]
gi|7573443|emb|CAB87759.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop
binding protein-41 [Arabidopsis thaliana]
Length = 406
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/48 (83%), Positives = 44/48 (91%), Gaps = 4/48 (8%)
Frame = -1
Query: 133 FTIKA----EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA EKKNVLIVNTNSGGHAVIGFYFAKELL++GH+VTILTVG
Sbjct: 69 FTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVG 116
>ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Capsella rubella]
gi|482559945|gb|EOA24136.1| hypothetical protein
CARUB_v10017370mg [Capsella rubella]
Length = 404
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/48 (81%), Positives = 43/48 (89%), Gaps = 4/48 (8%)
Frame = -1
Query: 133 FTIKA----EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA EKKNVLIVNTNSGGHAVIGFYFAKELL++GH VTI+TVG
Sbjct: 67 FTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVG 114
>ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2
[Theobroma cacao] gi|508702882|gb|EOX94778.1|
Chloroplast stem-loop binding protein of 41 kDa isoform
2 [Theobroma cacao]
Length = 393
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/47 (85%), Positives = 41/47 (87%), Gaps = 3/47 (6%)
Frame = -1
Query: 133 FTIKA---EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA EKK VLIVNTNSGGHAVIGFYFAKELL SGH VTILTVG
Sbjct: 64 FTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVG 110
>ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1
[Theobroma cacao] gi|508702881|gb|EOX94777.1|
Chloroplast stem-loop binding protein of 41 kDa isoform
1 [Theobroma cacao]
Length = 400
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/47 (85%), Positives = 41/47 (87%), Gaps = 3/47 (6%)
Frame = -1
Query: 133 FTIKA---EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA EKK VLIVNTNSGGHAVIGFYFAKELL SGH VTILTVG
Sbjct: 64 FTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVG 110
>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| mRNA-binding family protein
[Populus trichocarpa]
Length = 404
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/47 (85%), Positives = 41/47 (87%), Gaps = 3/47 (6%)
Frame = -1
Query: 133 FTIKA---EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA EKK VLIVNTNSGGHAVIGFYFAKELL SGH VTILTVG
Sbjct: 68 FTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVG 114
>ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein
ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 77.0 bits (188), Expect = 3e-12
Identities = 38/48 (79%), Positives = 43/48 (89%), Gaps = 4/48 (8%)
Frame = -1
Query: 133 FTIKA----EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA +KKNVLIVNTNSGGHAVIGFYFAKELL++GH VTI+TVG
Sbjct: 71 FTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVG 118
>gb|EPS64566.1| hypothetical protein M569_10212 [Genlisea aurea]
Length = 307
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = -1
Query: 130 TIKAEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
T+++EKKNVLIVNT++GGHAVIGFYFAKELL+SGH VT+ TVG
Sbjct: 13 TVRSEKKNVLIVNTDTGGHAVIGFYFAKELLSSGHDVTVFTVG 55
>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/47 (82%), Positives = 41/47 (87%), Gaps = 3/47 (6%)
Frame = -1
Query: 133 FTIKA---EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT++A EKK VLIVNTNSGGHAVIGFYFAKELL SGH VTILTVG
Sbjct: 69 FTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVG 115
>ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 404
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = -1
Query: 127 IKAEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
I A+KK VLIVNTNSGGHAVIGFYFAKELL SGH VTILTVG
Sbjct: 73 IAADKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVG 114
>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 404
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
AEKK VLIVNTNSGGHA+IGFYFAKELL +GHSVTILTVG
Sbjct: 75 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVG 114
>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 403
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
AEKK VLIVNTNSGGHA+IGFYFAKELL +GHSVTILTVG
Sbjct: 74 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVG 113
>ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
gi|355479698|gb|AES60901.1| MRNA-binding protein
[Medicago truncatula]
Length = 419
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
AEKK VLI+NTNSGGHAVIGFYFAKELL +GHSVTILTVG
Sbjct: 72 AEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVG 111
>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein
[Medicago truncatula]
Length = 401
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
AEKK VLI+NTNSGGHAVIGFYFAKELL +GHSVTILTVG
Sbjct: 72 AEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVG 111
>gb|ACU24107.1| unknown [Glycine max]
Length = 208
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
AEKK VLIVNTNSGGHA+IGFYFAKELL +GHSVTILTVG
Sbjct: 75 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVG 114
>gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 75.9 bits (185), Expect = 6e-12
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
AEKK VLIVNTNSGGHA+IGFYFAKELL +GHSVTILTVG
Sbjct: 74 AEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVG 113
>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
vinifera] gi|147789789|emb|CAN73874.1| hypothetical
protein VITISV_039540 [Vitis vinifera]
Length = 397
Score = 75.9 bits (185), Expect = 6e-12
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -1
Query: 127 IKAEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
+KA+KK VLIVNTNSGGHAVIGFYFAK+LL SGH VTI+TVG
Sbjct: 66 VKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVG 107
>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
Length = 408
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = -1
Query: 121 AEKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
A+KK VLIVNTNSGGHAVIGFYFAKELL SGH VTILTVG
Sbjct: 79 ADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVG 118
>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa a,
chloroplastic-like [Citrus sinensis]
gi|557546339|gb|ESR57317.1| hypothetical protein
CICLE_v10020449mg [Citrus clementina]
Length = 401
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/47 (80%), Positives = 40/47 (85%), Gaps = 3/47 (6%)
Frame = -1
Query: 133 FTIKA---EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
FT+KA EKK VLIVNTNSGGHAVIGFY AKELL SGH VTI+TVG
Sbjct: 65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
>ref|XP_007199894.1| hypothetical protein PRUPE_ppa006606mg [Prunus persica]
gi|462395294|gb|EMJ01093.1| hypothetical protein
PRUPE_ppa006606mg [Prunus persica]
Length = 403
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/47 (80%), Positives = 40/47 (85%), Gaps = 3/47 (6%)
Frame = -1
Query: 133 FTIKA---EKKNVLIVNTNSGGHAVIGFYFAKELLASGHSVTILTVG 2
F+IKA EKK VLIVNTN GGHAVIGFYFAKELL SGH VT+LTVG
Sbjct: 67 FSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHQVTVLTVG 113