BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00005852
         (240 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006412058.1| hypothetical protein EUTSA_v10024193mg [Eutr...    84   2e-14
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...    82   8e-14
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun...    82   1e-13
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...    82   1e-13
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    82   1e-13
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...    80   2e-13
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...    80   2e-13
emb|CAJ01915.1| DNA-directed RNA polymerase [Solanum tuberosum]        80   2e-13
ref|XP_006282990.1| hypothetical protein CARUB_v10003976mg [Caps...    80   3e-13
emb|CAA21466.2| DNA-directed RNA polymerase (EC 2.7.7.6) II larg...    80   3e-13
ref|NP_195305.2| DNA-directed RNA polymerase II subunit RPB1 [Ar...    80   3e-13
ref|XP_002867052.1| hypothetical protein ARALYDRAFT_491060 [Arab...    80   3e-13
emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsis thaliana]     80   3e-13
emb|CAA37130.1| RNA polymerase II [Arabidopsis thaliana]               80   3e-13
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru...    79   5e-13
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...    79   9e-13
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...    79   9e-13
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...    79   9e-13
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...    79   9e-13
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...    79   9e-13

>ref|XP_006412058.1| hypothetical protein EUTSA_v10024193mg [Eutrema salsugineum]
            gi|557113228|gb|ESQ53511.1| hypothetical protein
            EUTSA_v10024193mg [Eutrema salsugineum]
          Length = 1837

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = -3

Query: 238  RSPMGTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1494 RSPSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1535


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 37/43 (86%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSPNY+LSPNLRLSP++DAQFSPYVGG+AF
Sbjct: 1493 RSPITGTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535


>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
            gi|462398589|gb|EMJ04257.1| hypothetical protein
            PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/43 (86%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPNLRLSP+SDAQFSPYVGG+AF
Sbjct: 1493 RSPVSGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/43 (86%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPNLRLSP+SDAQFSPYVGG+AF
Sbjct: 1493 RSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/43 (86%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPNLRLSP+SDAQFSPYVGG+AF
Sbjct: 1493 RSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/43 (81%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSPNY+LSPN+R+SP++DAQFSPYVGG+AF
Sbjct: 1493 RSPISGTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/43 (81%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSPNY+LSPN+R+SP++DAQFSPYVGG+AF
Sbjct: 1493 RSPISGTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535


>emb|CAJ01915.1| DNA-directed RNA polymerase [Solanum tuberosum]
          Length = 361

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/43 (81%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238 RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
           RSP+ GTPYHDGMMSPNY+LSPN+R+SP++DAQFSPYVGG+AF
Sbjct: 73  RSPISGTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 115


>ref|XP_006282990.1| hypothetical protein CARUB_v10003976mg [Capsella rubella]
            gi|482551695|gb|EOA15888.1| hypothetical protein
            CARUB_v10003976mg [Capsella rubella]
          Length = 1838

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/43 (83%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1494 RSPISGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1536


>emb|CAA21466.2| DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain
            [Arabidopsis thaliana] gi|7270532|emb|CAB81489.1|
            DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain
            [Arabidopsis thaliana]
          Length = 1840

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/43 (83%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1495 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1537


>ref|NP_195305.2| DNA-directed RNA polymerase II subunit RPB1 [Arabidopsis thaliana]
            gi|322510106|sp|P18616.3|NRPB1_ARATH RecName:
            Full=DNA-directed RNA polymerase II subunit 1; AltName:
            Full=DNA-directed RNA polymerase II subunit RPB1;
            Short=DNA polymerase II subunit B1; AltName:
            Full=DNA-directed RNA polymerase III largest subunit
            gi|332661173|gb|AEE86573.1| DNA-directed RNA polymerase
            II subunit RPB1 [Arabidopsis thaliana]
          Length = 1839

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/43 (83%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1494 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1536


>ref|XP_002867052.1| hypothetical protein ARALYDRAFT_491060 [Arabidopsis lyrata subsp.
            lyrata] gi|297312888|gb|EFH43311.1| hypothetical protein
            ARALYDRAFT_491060 [Arabidopsis lyrata subsp. lyrata]
          Length = 1839

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/43 (83%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1495 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1537


>emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsis thaliana]
          Length = 1860

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/43 (83%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1515 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1557


>emb|CAA37130.1| RNA polymerase II [Arabidopsis thaliana]
          Length = 1841

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 36/43 (83%), Positives = 42/43 (97%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSPNY+LSPN+RLSP+SDAQFSPYVGG+AF
Sbjct: 1489 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1531


>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
          Length = 1866

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/43 (83%), Positives = 41/43 (95%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYH+GMMSP Y+LSPNLRLSP+SDAQFSPYVGG+AF
Sbjct: 1508 RSPVSGTPYHEGMMSPGYLLSPNLRLSPISDAQFSPYVGGMAF 1550


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 36/43 (83%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF
Sbjct: 1493 RSPVSGTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 36/43 (83%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF
Sbjct: 1493 RSPVSGTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 36/43 (83%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF
Sbjct: 1493 RSPVSGTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 36/43 (83%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF
Sbjct: 1493 RSPVSGTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 36/43 (83%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 238  RSPM-GTPYHDGMMSPNYMLSPNLRLSPVSDAQFSPYVGGVAF 113
            RSP+ GTPYHDGMMSP Y+ SPNLRLSPV+DAQFSPYVGG+AF
Sbjct: 1493 RSPVSGTPYHDGMMSPGYLFSPNLRLSPVTDAQFSPYVGGMAF 1535