BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00005828
         (1323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   307   6e-81
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise...   301   3e-79
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   296   1e-77
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   295   2e-77
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca...   295   4e-77
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...   295   4e-77
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...   295   4e-77
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...   295   4e-77
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   289   2e-75
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...   288   5e-75
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   281   3e-73
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   277   9e-72
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   277   9e-72
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   277   9e-72
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   276   1e-71
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   272   2e-70
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   265   3e-68
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...   263   1e-67
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   263   2e-67
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...   262   2e-67

>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  307 bits (787), Expect = 6e-81
 Identities = 178/373 (47%), Positives = 226/373 (60%), Gaps = 11/373 (2%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKP--LNLSNSIPVSKHFLCAIHHSSDSDFR 369
            + ++PS Q YP + F  DS QSS  KFH          +SIP  KH   A H++  S   
Sbjct: 1    MTLVPSRQLYPTSLF--DSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLN 58

Query: 370  PRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMK 549
            P +N  ++ + ++K+                             W+D WN S K      
Sbjct: 59   PEQNPLRKSNFVRKNQ-------------PISQYKPKKNFSSSSWIDKWNESHKHNRPKP 105

Query: 550  PQAVVNYR-----NRGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEESD--K 708
            P+AV++Y+     N                       +IVEKLKKFGY+DD +E     +
Sbjct: 106  PRAVLDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVR 165

Query: 709  KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPTEARR 888
             +VIEKGSVEDIFY+EEG+LPN+RGGFS+E P G ENV  GGDG+V FPWEK    E + 
Sbjct: 166  DSVIEKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVF-GGDGKVRFPWEKPKEEEKQE 224

Query: 889  --SLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSSEV 1062
              S+  +   SLAELTLP+SEL RL NL  + K+KTR+GG GVTQ VVE I E+WK+SE+
Sbjct: 225  EGSVRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEI 284

Query: 1063 VRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKRNE 1242
            VRLKIEGPPALNM+R+HE LERKTGGLVIWRSGTS+SLYRGV+YE PS+K+ K+IYK+N+
Sbjct: 285  VRLKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKND 344

Query: 1243 SSQKSLPTTEKKS 1281
             S   LPT   KS
Sbjct: 345  ISSAPLPTVADKS 357


>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
          Length = 761

 Score =  301 bits (772), Expect = 3e-79
 Identities = 177/374 (47%), Positives = 227/374 (60%), Gaps = 5/374 (1%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKPLNLSNSIPVSKHFLCAIHHSSDSDFRPR 375
            +AV+P YQFYP+ +  + SLQSS   F +R+       + +      A   +S   F P 
Sbjct: 1    MAVVPGYQFYPKTASFVHSLQSSVSDFQLRR-------LQLISFCSSARPSASRGRFNPS 53

Query: 376  KNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWN-LSVKPIIKMKP 552
            +         +K +GG   +                      W+D WN +     +  KP
Sbjct: 54   RG--------RKRDGGRNLAS--------GTLVADGRGASSSWMDFWNAVPGTQHVNRKP 97

Query: 553  QAVVNYRNRGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDD---VSEESDKKNVIE 723
            QAVV+YRN  D                    RIV KLKKFGY+DD     E    + ++E
Sbjct: 98   QAVVDYRNADDVSDAEEGTSTSTGVSTMQ--RIVAKLKKFGYLDDDAAADENEAGRQIVE 155

Query: 724  KGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEK-NIPTEARRSLDS 900
            KGSVEDIF VEEGLLPN+RGG S EFPFGDE V+  GD  V FPWEK N P   + SLDS
Sbjct: 156  KGSVEDIFSVEEGLLPNSRGGISHEFPFGDEIVAVKGDVRVRFPWEKKNDPNVQKSSLDS 215

Query: 901  RKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSSEVVRLKIE 1080
            RK RSLAE TLP+SE++RLRNLAL+ KNKTR+ GAGVTQ++VE+I EKWK++EVVRLKIE
Sbjct: 216  RKARSLAESTLPESEVTRLRNLALRTKNKTRIKGAGVTQEIVEAIHEKWKTAEVVRLKIE 275

Query: 1081 GPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKRNESSQKSL 1260
            GP ALNM+R+HE LERKTGGLV+WRSG+SV+LYRGV +ED S K+ K+I   N + ++S 
Sbjct: 276  GPSALNMKRMHEILERKTGGLVVWRSGSSVALYRGVKFEDTSRKLNKRITGNNGAPRESY 335

Query: 1261 PTTEKKSPDPSKFS 1302
             + E+ +   S+ S
Sbjct: 336  RSLERITQGSSELS 349


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  296 bits (758), Expect = 1e-77
 Identities = 180/375 (48%), Positives = 229/375 (61%), Gaps = 13/375 (3%)
 Frame = +1

Query: 196  IAVMPSYQFYPQN---SFLMDSLQSSACKFHVRKPLNLSN-------SIPVSKHFLCAIH 345
            +A++PS+QFYP+    SFL  S      K +   P ++ N       + P   +F+   H
Sbjct: 1    MALVPSHQFYPRTTRLSFLRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPPKRSNFMITPH 60

Query: 346  HSSDSDFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLS 525
               + D   R+   KR + + K N    ++  D                   WL  WN +
Sbjct: 61   DVVNQDCIFRRTPSKRSNFVVK-NSSRRWNL-DTISPNLKSRDSGTSVFSSSWLGKWNGT 118

Query: 526  VKPIIKMKPQAVVNYRN-RGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEES 702
               I   K Q V+NYRN  GD                    RIVEKLKKFGY D+ +E+ 
Sbjct: 119  RNDIKLKKAQIVLNYRNSNGD----TSGSDCEESISGSTMDRIVEKLKKFGYADEATEKE 174

Query: 703  DK-KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKN-IPT 876
             K K V+EKGS+EDIF+VEEG+LPN RGGFS+E PFGDENV    DG V FPWE+  +  
Sbjct: 175  KKEKRVVEKGSIEDIFFVEEGILPNVRGGFSEESPFGDENVI-AKDGVVRFPWERPLVKK 233

Query: 877  EARRSLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSS 1056
            E   S+ SR    LAELTLP SEL RL NLAL++KNK+R+ GAGVTQQVVE+IREKWK+S
Sbjct: 234  EESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTS 293

Query: 1057 EVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKR 1236
            EVVRLK+EG PALNM+R+HE LERKTGGLVIWRSGTSV+LYRGV+YE PS ++KK+I +R
Sbjct: 294  EVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRR 353

Query: 1237 NESSQKSLPTTEKKS 1281
            +E   K+ P  + +S
Sbjct: 354  DEIRHKNSPIVDGES 368


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  295 bits (756), Expect = 2e-77
 Identities = 180/380 (47%), Positives = 233/380 (61%), Gaps = 13/380 (3%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKF---HVRKPLNLSNSIPVSK-------HFLCAIH 345
            +A++PS+QFYP+ + L     SS+  F   +   P ++ N   + K       +F+   H
Sbjct: 1    MALVPSHQFYPRTTRLSFFRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPSKRSNFVVTPH 60

Query: 346  HSSDSDFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLS 525
               + D   ++   KR + + K N    ++  D                   WL  WN +
Sbjct: 61   DVVNKDCIFKRTPLKRSNFVVK-NSSRRWNL-DTISPNLKSRDSGTSVFSSSWLGKWNET 118

Query: 526  VKPIIKMKPQAVVNYRN-RGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSE-E 699
               I   K Q V+NYRN  GD                    RIVEKLKKFGY D+ +E E
Sbjct: 119  RNDIKLKKAQIVLNYRNSNGD----TSGSDCEESISGSTMDRIVEKLKKFGYADEATEKE 174

Query: 700  SDKKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKN-IPT 876
              +K V+EKGS+EDIF+VEEG+LPN RGGFS+E PFGDEN+    DG V FPWEK  +  
Sbjct: 175  KREKRVVEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENII-AKDGVVGFPWEKPLVKK 233

Query: 877  EARRSLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSS 1056
            E   S+ SR    LAELTLP SEL RL NLAL++KNK+R+ GAGVTQQVVE+IREKWK+S
Sbjct: 234  EESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTS 293

Query: 1057 EVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKR 1236
            EVVRLK+EG PALNM+R+HE LERKTGGLVIWRSGTSV+LYRGV+YE PS ++KK+I +R
Sbjct: 294  EVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRR 353

Query: 1237 NESSQKSLPTTEKKSPDPSK 1296
            +E  QK+ P  + +S   S+
Sbjct: 354  DEIRQKNSPIVDGESNQNSR 373


>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
            gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
            4 [Theobroma cacao]
          Length = 645

 Score =  295 bits (754), Expect = 4e-77
 Identities = 176/385 (45%), Positives = 229/385 (59%), Gaps = 15/385 (3%)
 Frame = +1

Query: 196  IAVMPSYQFYPQN---SFLMDSLQSSACKFHVRKPLNL----SNSIPVSKHFLCAIHHSS 354
            + ++P+ QF+P     S  +DS Q+   KFH   PL      S++ P+    L A +++ 
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKFH-GLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 355  DSDFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKP 534
             S+    +  + +            F  +D                   WLDSWN + K 
Sbjct: 60   TSNSLFHQYPKSKTK---------AFPTKDPTFRSN-------------WLDSWNKTHKG 97

Query: 535  IIKMKPQAVVNYRNRGD-YXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEESDK- 708
                 P+ V NYR +GD +                   +IVEKLKKFGY+ + +E+ +K 
Sbjct: 98   FGPKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKG 157

Query: 709  ----KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPT 876
                K VIE+GS+EDIFYVEEG+LPN RGGFSKE P G ENV  G DGEV FPWEK    
Sbjct: 158  EEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVF-GSDGEVRFPWEKRKED 216

Query: 877  EARRSLDSRKNR--SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWK 1050
            E      +R++   SLAELTLP+SEL RLRNL  + K+K R+ GAGVTQ+VV++I EKWK
Sbjct: 217  EEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWK 276

Query: 1051 SSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIY 1230
            + E+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGTSVSLYRGV+YE PS+ + K+IY
Sbjct: 277  TEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIY 336

Query: 1231 KRNESSQKSLPTTEKKSPDPSKFSS 1305
            KRNE+   +LP+   K+ D S   S
Sbjct: 337  KRNETFTYALPSVSDKTKDLSSLGS 361


>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
            gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
            3 [Theobroma cacao]
          Length = 856

 Score =  295 bits (754), Expect = 4e-77
 Identities = 176/385 (45%), Positives = 229/385 (59%), Gaps = 15/385 (3%)
 Frame = +1

Query: 196  IAVMPSYQFYPQN---SFLMDSLQSSACKFHVRKPLNL----SNSIPVSKHFLCAIHHSS 354
            + ++P+ QF+P     S  +DS Q+   KFH   PL      S++ P+    L A +++ 
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKFH-GLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 355  DSDFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKP 534
             S+    +  + +            F  +D                   WLDSWN + K 
Sbjct: 60   TSNSLFHQYPKSKTK---------AFPTKDPTFRSN-------------WLDSWNKTHKG 97

Query: 535  IIKMKPQAVVNYRNRGD-YXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEESDK- 708
                 P+ V NYR +GD +                   +IVEKLKKFGY+ + +E+ +K 
Sbjct: 98   FGPKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKG 157

Query: 709  ----KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPT 876
                K VIE+GS+EDIFYVEEG+LPN RGGFSKE P G ENV  G DGEV FPWEK    
Sbjct: 158  EEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVF-GSDGEVRFPWEKRKED 216

Query: 877  EARRSLDSRKNR--SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWK 1050
            E      +R++   SLAELTLP+SEL RLRNL  + K+K R+ GAGVTQ+VV++I EKWK
Sbjct: 217  EEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWK 276

Query: 1051 SSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIY 1230
            + E+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGTSVSLYRGV+YE PS+ + K+IY
Sbjct: 277  TEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIY 336

Query: 1231 KRNESSQKSLPTTEKKSPDPSKFSS 1305
            KRNE+   +LP+   K+ D S   S
Sbjct: 337  KRNETFTYALPSVSDKTKDLSSLGS 361


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
            gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
            2 [Theobroma cacao]
          Length = 685

 Score =  295 bits (754), Expect = 4e-77
 Identities = 176/385 (45%), Positives = 229/385 (59%), Gaps = 15/385 (3%)
 Frame = +1

Query: 196  IAVMPSYQFYPQN---SFLMDSLQSSACKFHVRKPLNL----SNSIPVSKHFLCAIHHSS 354
            + ++P+ QF+P     S  +DS Q+   KFH   PL      S++ P+    L A +++ 
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKFH-GLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 355  DSDFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKP 534
             S+    +  + +            F  +D                   WLDSWN + K 
Sbjct: 60   TSNSLFHQYPKSKTK---------AFPTKDPTFRSN-------------WLDSWNKTHKG 97

Query: 535  IIKMKPQAVVNYRNRGD-YXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEESDK- 708
                 P+ V NYR +GD +                   +IVEKLKKFGY+ + +E+ +K 
Sbjct: 98   FGPKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKG 157

Query: 709  ----KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPT 876
                K VIE+GS+EDIFYVEEG+LPN RGGFSKE P G ENV  G DGEV FPWEK    
Sbjct: 158  EEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVF-GSDGEVRFPWEKRKED 216

Query: 877  EARRSLDSRKNR--SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWK 1050
            E      +R++   SLAELTLP+SEL RLRNL  + K+K R+ GAGVTQ+VV++I EKWK
Sbjct: 217  EEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWK 276

Query: 1051 SSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIY 1230
            + E+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGTSVSLYRGV+YE PS+ + K+IY
Sbjct: 277  TEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIY 336

Query: 1231 KRNESSQKSLPTTEKKSPDPSKFSS 1305
            KRNE+   +LP+   K+ D S   S
Sbjct: 337  KRNETFTYALPSVSDKTKDLSSLGS 361


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
            gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
            1 [Theobroma cacao]
          Length = 876

 Score =  295 bits (754), Expect = 4e-77
 Identities = 176/385 (45%), Positives = 229/385 (59%), Gaps = 15/385 (3%)
 Frame = +1

Query: 196  IAVMPSYQFYPQN---SFLMDSLQSSACKFHVRKPLNL----SNSIPVSKHFLCAIHHSS 354
            + ++P+ QF+P     S  +DS Q+   KFH   PL      S++ P+    L A +++ 
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKFH-GLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 355  DSDFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKP 534
             S+    +  + +            F  +D                   WLDSWN + K 
Sbjct: 60   TSNSLFHQYPKSKTK---------AFPTKDPTFRSN-------------WLDSWNKTHKG 97

Query: 535  IIKMKPQAVVNYRNRGD-YXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEESDK- 708
                 P+ V NYR +GD +                   +IVEKLKKFGY+ + +E+ +K 
Sbjct: 98   FGPKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKG 157

Query: 709  ----KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPT 876
                K VIE+GS+EDIFYVEEG+LPN RGGFSKE P G ENV  G DGEV FPWEK    
Sbjct: 158  EEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVF-GSDGEVRFPWEKRKED 216

Query: 877  EARRSLDSRKNR--SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWK 1050
            E      +R++   SLAELTLP+SEL RLRNL  + K+K R+ GAGVTQ+VV++I EKWK
Sbjct: 217  EEEGGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWK 276

Query: 1051 SSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIY 1230
            + E+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGTSVSLYRGV+YE PS+ + K+IY
Sbjct: 277  TEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIY 336

Query: 1231 KRNESSQKSLPTTEKKSPDPSKFSS 1305
            KRNE+   +LP+   K+ D S   S
Sbjct: 337  KRNETFTYALPSVSDKTKDLSSLGS 361


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  289 bits (739), Expect = 2e-75
 Identities = 173/368 (47%), Positives = 220/368 (59%), Gaps = 6/368 (1%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFH-VRKPLNLSNSIPVSKHFLCAIHHSSDSDFRP 372
            + ++PS Q YP +      L+SS  KFH     L   +SIP  K    A  +   S   P
Sbjct: 1    MTLVPSRQLYPTSL-----LESSLSKFHGTHFHLFRYSSIPFKKQSFHATQYFITSSLTP 55

Query: 373  RKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMKP 552
             +N  ++L+LL          C+                    W+D WN S K     +P
Sbjct: 56   EQNPPRKLNLL---------ICQ---------YKPTKNLSSCSWIDRWNDSRKQHGPRRP 97

Query: 553  QAVVNYRNRGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEESD---KKNVIE 723
            +AV++Y++                       +IVEKLKKFGY+ +   E     ++ VIE
Sbjct: 98   RAVLDYQSNES-----GNLSSDGNDGGSTMDKIVEKLKKFGYIAEDKNEGRGEVRERVIE 152

Query: 724  KGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPTEARR--SLD 897
            KGSVEDIFYVEEG+LPN+RGGFS   P G E+V   G GEV FPWEK    E     S+ 
Sbjct: 153  KGSVEDIFYVEEGMLPNSRGGFSGVSPLGTEDVFGDGGGEVRFPWEKPREREKEEGGSIR 212

Query: 898  SRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSSEVVRLKI 1077
             R   SLAELTLP+SEL RLRNL  + K+KT++GGAGVTQ VVE I E+WK++E+VRLKI
Sbjct: 213  RRSRTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLKI 272

Query: 1078 EGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKRNESSQKS 1257
            EGPPALNM+R+HE LERKTGGLV+WRSGTS+SLYRGV+YE PS+++ K+I+KRNE S  S
Sbjct: 273  EGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKQIFKRNEISSTS 332

Query: 1258 LPTTEKKS 1281
            LPT   KS
Sbjct: 333  LPTVADKS 340


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 878

 Score =  288 bits (736), Expect = 5e-75
 Identities = 178/399 (44%), Positives = 229/399 (57%), Gaps = 23/399 (5%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKPLNLSNSIPVSKHFL-----CAIHHSSDS 360
            +A++PS QFYP + F  DSL  +  KF         +SI   KH L      +++ SS S
Sbjct: 1    MALVPSRQFYPTSFF--DSLHGTHIKF-----FRYGSSITFRKHRLYSTKYSSVNSSSSS 53

Query: 361  DFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPII 540
            +  P     K     Q +N    +                       W++ WN + + I 
Sbjct: 54   EQNPGGKYNKFFRTTQNNNWHNKYD---------------DNLSSTSWIEKWNETHQQIR 98

Query: 541  KMKPQAVVNYRN-------RGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSEE 699
               P AV++YRN       R  Y                   RIVEKLKKFGYMDDV  E
Sbjct: 99   PKPPGAVLDYRNSESGNQPRSSYANRNGGDNNSGGSTME---RIVEKLKKFGYMDDVGSE 155

Query: 700  SDK---KNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNI 870
              +   + VIEKGSVEDIFYVEEG+LPN RGGFS + P G E V  G  GEV FPWEK  
Sbjct: 156  GKEDKGERVIEKGSVEDIFYVEEGMLPNPRGGFSPDSPLGVEGVFGGNGGEVRFPWEKPK 215

Query: 871  PTEARR--SLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREK 1044
                +   S+  R   SLAELTLP+SEL RLRNL  + K+KTR+GGAGVTQ+VV+ I E+
Sbjct: 216  EKVEKEGGSMRRRSKTSLAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQEVVDMIHER 275

Query: 1045 WKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKK 1224
            WK+ E+VRLKIEG PALNM+R+HE LERKTGGLV+WRSGTS+SLYRGV+Y+ PSL++KK+
Sbjct: 276  WKTLEIVRLKIEGAPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYQVPSLELKKR 335

Query: 1225 IYKRNESS------QKSLPTTEKKSPDPSKFSSLAKQDA 1323
            +YK+ E S       KS     K +PD +  +++ K ++
Sbjct: 336  LYKKPEISSIQTVGDKSTRDLAKFAPDTNTDTAIEKSES 374


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  281 bits (720), Expect = 3e-73
 Identities = 179/382 (46%), Positives = 223/382 (58%), Gaps = 18/382 (4%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKPLNL---SNSIPVSKH--FLCAIHHSSDS 360
            +A++PS Q Y      +DS QSS  KFH   PL     S+S P+  H  + C+I   + S
Sbjct: 1    MALVPSRQLY------IDSFQSSFSKFH-GTPLQFFRYSSSFPLRSHSGYACSITDKNPS 53

Query: 361  DFRPRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPII 540
                     K  +L    N   G S                      W  +WN   K  +
Sbjct: 54   TKSTSFPTDKSKTL----NLSTGSS----------------------WFFNWNKPNKQNL 87

Query: 541  KMKPQAVVNYRNRGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMD-DVSEESDK--K 711
               PQAV +YR+                       +IVEKLKK GYMD DV+E  ++  +
Sbjct: 88   PRTPQAVFDYRSNNS----------NSSGSGSTMEKIVEKLKKHGYMDGDVNENKERMQE 137

Query: 712  NVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEK--NIPTEAR 885
             VIEKGSVEDIFYVEEG+LPN RGGFSKE P G E+V R  DGEV FPWEK      E +
Sbjct: 138  RVIEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRS-DGEVRFPWEKPKKEEDEGK 196

Query: 886  RSLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSSEVV 1065
             +  S+   SLAELTLP+SEL RLRNL    K+KTRVGG GVTQ+VV++I +KWK+SE+ 
Sbjct: 197  WTARSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIA 256

Query: 1066 RLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKRNES 1245
            R+K+EG PALNM+R+HE LE KTGGLVIWRSG +VSLYRGV+YEDP+LK KK+I+K+ E+
Sbjct: 257  RVKVEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKET 316

Query: 1246 SQKSLP--------TTEKKSPD 1287
            S  SLP        +  K SPD
Sbjct: 317  SSNSLPAATSITIGSQSKNSPD 338


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  277 bits (708), Expect = 9e-72
 Identities = 181/383 (47%), Positives = 219/383 (57%), Gaps = 22/383 (5%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKP--LNLSNSIPVSKHFLCAIHHSSDSDFR 369
            +A++PS QF P  + + DS QSS  KFH          +SIP+  HF    + +  S+  
Sbjct: 1    MALVPSRQFCPATA-IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFF---YQNFSSNSA 56

Query: 370  PRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMK 549
              KN  +++     +N    FS  D                   WL  WN   K      
Sbjct: 57   HEKNTPRKICSFSTNNF---FSQHDKDDNANLCSSSS-------WLVKWNKPNKYNRLKP 106

Query: 550  PQAVVNYR-NRGDYXXXXXXXXXXXXXXXXXXX-------RIVEKLKKFGYMDDVSEESD 705
            PQA VNYR N  D                           +IVEKLKKFGY+ D   + D
Sbjct: 107  PQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGD 166

Query: 706  --------KKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFG-DENVSRGGDGEVTFPW 858
                    K+ VIEKGS+EDIFYVEEGLLPN RGGFSKE P G  E V  G DGEV FPW
Sbjct: 167  NDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEV--GSDGEVKFPW 224

Query: 859  EKNIP--TEARRSLDSRKNR-SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVE 1029
            EK      E R  +  R +R SLAELTLP+SEL RLRNL  + K+KTR+ GAG+TQ VV+
Sbjct: 225  EKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVD 284

Query: 1030 SIREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSL 1209
             I EKWK+SE+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGT+VSLYRGV+YE PS+
Sbjct: 285  IIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV 344

Query: 1210 KIKKKIYKRNESSQKSLPTTEKK 1278
            ++ K+IYKRNE    S+     K
Sbjct: 345  QLNKRIYKRNELPASSVSQATDK 367


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  277 bits (708), Expect = 9e-72
 Identities = 181/383 (47%), Positives = 219/383 (57%), Gaps = 22/383 (5%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKP--LNLSNSIPVSKHFLCAIHHSSDSDFR 369
            +A++PS QF P  + + DS QSS  KFH          +SIP+  HF    + +  S+  
Sbjct: 1    MALVPSRQFCPATA-IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFF---YQNFSSNSA 56

Query: 370  PRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMK 549
              KN  +++     +N    FS  D                   WL  WN   K      
Sbjct: 57   HEKNTPRKICSFSTNNF---FSQHDKDDNANLCSSSS-------WLVKWNKPNKYNRLKP 106

Query: 550  PQAVVNYR-NRGDYXXXXXXXXXXXXXXXXXXX-------RIVEKLKKFGYMDDVSEESD 705
            PQA VNYR N  D                           +IVEKLKKFGY+ D   + D
Sbjct: 107  PQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGD 166

Query: 706  --------KKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFG-DENVSRGGDGEVTFPW 858
                    K+ VIEKGS+EDIFYVEEGLLPN RGGFSKE P G  E V  G DGEV FPW
Sbjct: 167  NDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEV--GSDGEVKFPW 224

Query: 859  EKNIP--TEARRSLDSRKNR-SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVE 1029
            EK      E R  +  R +R SLAELTLP+SEL RLRNL  + K+KTR+ GAG+TQ VV+
Sbjct: 225  EKRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVD 284

Query: 1030 SIREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSL 1209
             I EKWK+SE+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGT+VSLYRGV+YE PS+
Sbjct: 285  IIHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV 344

Query: 1210 KIKKKIYKRNESSQKSLPTTEKK 1278
            ++ K+IYKRNE    S+     K
Sbjct: 345  QLNKRIYKRNELPASSVSQATDK 367


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  277 bits (708), Expect = 9e-72
 Identities = 164/366 (44%), Positives = 217/366 (59%), Gaps = 4/366 (1%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKPLNLSNSIPVSKHFLCAIHHSSDSDFRPR 375
            +A++PS QFYP  +  +DS  S+  +F        SN       ++     +S+S    R
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHSTRLQFF---RYGSSNRFRTHSSYVARNTIASNSTNPQR 57

Query: 376  KN--LRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMK 549
            K+  +     + Q  +GGV  S                      W+D WN   +     +
Sbjct: 58   KSNIVFTNTPVSQYDSGGVSSS-------------------GGNWIDKWNGPHQKSHPKE 98

Query: 550  PQAVVNYRNRGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSE--ESDKKNVIE 723
             + V+NYRN                       +IVEKLKKFGYMDDV E  E+ ++ +IE
Sbjct: 99   SRPVMNYRNS-----ETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIE 153

Query: 724  KGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPTEARRSLDSR 903
            KGS+EDIFY+EEG+LPN +GGFS + P G EN    G+GEV FPWE+  P     S+  +
Sbjct: 154  KGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKG-DGNGEVRFPWER--PKVEEGSVRIK 210

Query: 904  KNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSSEVVRLKIEG 1083
               SLAELTLP+SEL RLRNL ++ KNKT++GG GVTQ VV+ IREKWK+SE+V+LK EG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 1084 PPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKRNESSQKSLP 1263
              ALNMRR+HE LERKTGGLVIWRSGTSVSLYRGV+YE P +++ K++YK+NE+S  S  
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP-VQLNKRVYKKNETSHSSFS 329

Query: 1264 TTEKKS 1281
            +    S
Sbjct: 330  SITPNS 335


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  276 bits (707), Expect = 1e-71
 Identities = 164/366 (44%), Positives = 217/366 (59%), Gaps = 4/366 (1%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKPLNLSNSIPVSKHFLCAIHHSSDSDFRPR 375
            +A++PS QFYP  +  +DS  S+  +F        SN       ++     +S+S    R
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHSTRLQFF---RYGSSNRFRTHSSYVTRNTIASNSTNPQR 57

Query: 376  KN--LRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMK 549
            K+  +     + Q  +GGV  S                      W+D WN   +     +
Sbjct: 58   KSNIVFTNTPVSQYDSGGVSSS-------------------GGNWIDKWNGPHQKSHPKE 98

Query: 550  PQAVVNYRNRGDYXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYMDDVSE--ESDKKNVIE 723
             + V+NYRN                       +IVEKLKKFGYMDDV E  E+ ++ +IE
Sbjct: 99   XRPVMNYRNS-----ETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIE 153

Query: 724  KGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFPWEKNIPTEARRSLDSR 903
            KGS+EDIFY+EEG+LPN +GGFS + P G EN    G+GEV FPWE+  P     S+  +
Sbjct: 154  KGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKG-DGNGEVRFPWER--PKVEEGSVRIK 210

Query: 904  KNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVESIREKWKSSEVVRLKIEG 1083
               SLAELTLP+SEL RLRNL ++ KNKT++GG GVTQ VV+ IREKWK+SE+V+LK EG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 1084 PPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLKIKKKIYKRNESSQKSLP 1263
              ALNMRR+HE LERKTGGLVIWRSGTSVSLYRGV+YE P +++ K++YK+NE+S  S  
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVP-VQLNKRVYKKNETSHSSFS 329

Query: 1264 TTEKKS 1281
            +    S
Sbjct: 330  SITPNS 335


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  272 bits (696), Expect = 2e-70
 Identities = 181/382 (47%), Positives = 217/382 (56%), Gaps = 21/382 (5%)
 Frame = +1

Query: 196  IAVMPSYQFYPQNSFLMDSLQSSACKFHVRKP--LNLSNSIPVSKHFLCAIHHSSDSDFR 369
            +A++PS QF P  + + DS QSS  KFH          +SIP+   F    + +  S+  
Sbjct: 1    MALVPSRQFCPATA-IFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFF---YQNFSSNSA 56

Query: 370  PRKNLRKRLSLLQKSNGGVGFSCEDXXXXXXXXXXXXXXXXXXXWLDSWNLSVKPIIKMK 549
              KN  ++      +N    FS  D                   WL  WN   K      
Sbjct: 57   HEKNPPRKTCSFSTNNF---FSQHDKDDNANLCSSSS-------WLVKWNKPNKYNRLKP 106

Query: 550  PQAVVNYR-NRGDYXXXXXXXXXXXXXXXXXXX-------RIVEKLKKFGYMDDVSEESD 705
            PQA VNYR N  D                           +IVEKLKKFGY+ D   + D
Sbjct: 107  PQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDGD 166

Query: 706  --------KKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFG-DENVSRGGDGEVTFPW 858
                    K+ VIEKGS+EDIFYVEEGLLPN RGGFSKE P G  E V  G DGEV FPW
Sbjct: 167  NDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEV--GSDGEVKFPW 224

Query: 859  EKNIPTEAR-RSLDSRKNR-SLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVVES 1032
            EK     A  R L  R +R SLAELTLP+SEL RLRNL  + K+KTR+ GAG+TQ VV+ 
Sbjct: 225  EKRKEEVAEGRWLVKRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDI 284

Query: 1033 IREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPSLK 1212
            I EKWK+SE+VRLKIEG PALNM+R+HE LERKTGGLVIWRSGT+VSLYRGV+YE PS++
Sbjct: 285  IHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ 344

Query: 1213 IKKKIYKRNESSQKSLPTTEKK 1278
            + K+IYKRNE    S+     K
Sbjct: 345  LNKRIYKRNELPASSVSQATDK 366


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  265 bits (678), Expect = 3e-68
 Identities = 147/281 (52%), Positives = 185/281 (65%), Gaps = 13/281 (4%)
 Frame = +1

Query: 502  WLDSWNLSVKPIIKMKPQAVVNYRNRGDYXXXXXXXXXXXXXXXXXXX-----------R 648
            W+D WN + K      P+AV++Y +  +                               +
Sbjct: 83   WIDRWNETAKRNRPKPPRAVLDYPSSDENEVSISSTGFSKSYRASSRIDDDGRGGSTMEK 142

Query: 649  IVEKLKKFGYMDDVSEESDKKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSR 828
            IV KLKKFGY+DD ++E  ++  IEKGSVEDI Y+EEG+LPNTRGGFSKE P GDEN+  
Sbjct: 143  IVRKLKKFGYIDDENKEKGEERAIEKGSVEDILYIEEGMLPNTRGGFSKESPMGDENMF- 201

Query: 829  GGDGEVTFPWEKNIPTEARRSLDSRK-NRSLAELTLPQSELSRLRNLALKVKNKTRVGGA 1005
            G DGEV FPWEK    E      +R+ + SLA+LTLP+ EL RLRNL  + ++K ++GG 
Sbjct: 202  GSDGEVRFPWEKPKEKEDTHGDSTRRGSASLAQLTLPEPELRRLRNLTFQKRHKMKIGGG 261

Query: 1006 GVTQQVVESIREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRG 1185
            GVTQ VV+ I EKWKSSE+VRLKI GPPALNM+R+HE LERKTGGLVIWRSGTS+SLYRG
Sbjct: 262  GVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRG 321

Query: 1186 VNYEDPSL-KIKKKIYKRNESSQKSLPTTEKKSPDPSKFSS 1305
            V+YE P   +  K+IYKRNE +  +LP T   +  PS+ SS
Sbjct: 322  VSYELPEAPQFNKRIYKRNEIT--ALPKTGASTIAPSESSS 360


>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 838

 Score =  263 bits (673), Expect = 1e-67
 Identities = 141/274 (51%), Positives = 179/274 (65%), Gaps = 6/274 (2%)
 Frame = +1

Query: 502  WLDSWNLSVKPIIKMKPQAVVNYRNRGD--YXXXXXXXXXXXXXXXXXXXRIVEKLKKFG 675
            WL  WN   +P     P+ V+NY+  G+                      RIVEKLKKFG
Sbjct: 66   WLKRWNEQNRP---KPPRGVLNYQGSGNGHSSKSDFDSSDDEDFGGSRMDRIVEKLKKFG 122

Query: 676  YMDDVSEESDKKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGDGEVTFP 855
            Y  D +E   ++ VIEKGS+EDIFYVEEG+LPNTRGGFS E PFG  +   G  GEV FP
Sbjct: 123  YESDENENIKEEGVIEKGSMEDIFYVEEGMLPNTRGGFSPESPFGIGSYGSGDGGEVRFP 182

Query: 856  WEKNI---PTEARRSLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGGAGVTQQVV 1026
            WEK +     E R S   +   S+AELTLP+SEL RL  L    K+KTR+GG GVTQ  V
Sbjct: 183  WEKPVVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAAV 242

Query: 1027 ESIREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYRGVNYEDPS 1206
            + I E+WK+SE+VRLK EG  ALNM+R+HE LE+KTGGLVIWRSG SVSLYRGV+Y+DPS
Sbjct: 243  DKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSGNSVSLYRGVSYKDPS 302

Query: 1207 LKIKKKIYKRNESSQKSLPT-TEKKSPDPSKFSS 1305
            ++  K++Y++NE S K L   ++    +PS+F++
Sbjct: 303  IQQNKQLYRKNEKSLKFLSAPSDDFEVEPSEFTT 336


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
            gi|223543652|gb|EEF45180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  263 bits (671), Expect = 2e-67
 Identities = 139/225 (61%), Positives = 170/225 (75%), Gaps = 8/225 (3%)
 Frame = +1

Query: 646  RIVEKLKKFGYMDDVSEESDKKN----VIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGD 813
            +IVEKLKK GY+D   +E  K+     VI+KGSVEDIFYVEEG LPN+RGGFSKE P G 
Sbjct: 3    KIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGGFSKESPLGV 62

Query: 814  ENVSRGGDGEVTFPWEK----NIPTEARRSLDSRKNRSLAELTLPQSELSRLRNLALKVK 981
            E+V +  +GEV FPWEK     +  E + +  S+    LAELTLP+SEL RLRNL  ++K
Sbjct: 63   EDVFKS-NGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRLRNLTYQIK 121

Query: 982  NKTRVGGAGVTQQVVESIREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSG 1161
            +K RV GAGVTQ+VV+SI ++WK+SE+VR+K+EG PALNMRR+HE LERKTGGLVIWRSG
Sbjct: 122  SKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSG 181

Query: 1162 TSVSLYRGVNYEDPSLKIKKKIYKRNESSQKSLPTTEKKSPDPSK 1296
            TSVSLYRGV+YEDPS+++ K+I KRNE S  SL T       PSK
Sbjct: 182  TSVSLYRGVSYEDPSVQLNKQILKRNELSNNSLSTATGIIRSPSK 226


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 838

 Score =  262 bits (670), Expect = 2e-67
 Identities = 146/266 (54%), Positives = 176/266 (66%), Gaps = 13/266 (4%)
 Frame = +1

Query: 502  WLDSWNL-SVKPIIKMKPQAVVNYRNRGD---YXXXXXXXXXXXXXXXXXXXRIVEKLKK 669
            WL  WN  S K      P+AV+NYRN G+                       RIVEKLKK
Sbjct: 61   WLKHWNQPSSKHNRPKPPRAVLNYRNSGNGHSSKSHFSSSDDEDNNGGSTMDRIVEKLKK 120

Query: 670  FGYMDDVSEE----SDKKNVIEKGSVEDIFYVEEGLLPNTRGGFSKEFPFGDENVSRGGD 837
            FGY DD  +E    + K+ VIEKGSVEDIFYVEEG+LPNT+GGFS E PFG       G 
Sbjct: 121  FGYDDDDDDEKKDHNTKERVIEKGSVEDIFYVEEGILPNTKGGFSSESPFGVGRFGSDG- 179

Query: 838  GEVTFPWEKNIPT-----EARRSLDSRKNRSLAELTLPQSELSRLRNLALKVKNKTRVGG 1002
            GEV FPWEK         E R+ L  +   SLAELTLP+SEL RL  L  + K+KTR+GG
Sbjct: 180  GEVRFPWEKKTVVDDEEEEDRKGLRKKSKTSLAELTLPESELKRLLKLTFEKKHKTRIGG 239

Query: 1003 AGVTQQVVESIREKWKSSEVVRLKIEGPPALNMRRVHETLERKTGGLVIWRSGTSVSLYR 1182
             GVTQ VV+ I E+WK+SE+VRLK EG  ALNM+R+HE LERKTGGLVIWRSG SVSLYR
Sbjct: 240  GGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILERKTGGLVIWRSGNSVSLYR 299

Query: 1183 GVNYEDPSLKIKKKIYKRNESSQKSL 1260
            GV+Y+DPS++  K++Y+++E+S K L
Sbjct: 300  GVSYKDPSIQHNKQLYRKSENSSKFL 325