BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00005827
         (1683 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun...   203   2e-99
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   181   3e-77
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   176   3e-76
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   176   3e-76
gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus...   179   6e-76
gb|EYU32999.1| hypothetical protein MIMGU_mgv1a003183mg [Mimulus...   275   2e-75
ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron sp...   167   3e-70
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...   255   2e-69
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   260   1e-66
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   259   3e-66
ref|XP_003630867.1| Chloroplastic group IIA intron splicing faci...   152   1e-65
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   251   4e-65
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   248   4e-65
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca...   253   1e-64
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...   253   1e-64
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...   253   1e-64
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   249   2e-64
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   252   3e-64
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   250   1e-63
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   246   2e-63

>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
            gi|462399326|gb|EMJ04994.1| hypothetical protein
            PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  203 bits (516), Expect(2) = 2e-99
 Identities = 111/229 (48%), Positives = 152/229 (66%), Gaps = 3/229 (1%)
 Frame = -3

Query: 1126 IEESDASR---FAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGF 956
            +  S+AS+    AGTL ET+   + W  +L  ++ EKM R++   RHASLVR L+ KL  
Sbjct: 618  VSNSEASKGQFVAGTLAETMAATTHWRNQLTIDKVEKMRRDSTFARHASLVRHLEKKLAL 677

Query: 955  XXXXXXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXG 776
                        A+V+ESL P+D  +D E+LTDE+RF+FRK+GL MK            G
Sbjct: 678  GKGKLRKAEKALARVQESLEPSDLPDDLETLTDEDRFLFRKIGLSMKPFLLLGRREVYSG 737

Query: 775  TVENMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGR 596
            T+ENMHLHWK++ELVKIIV+ +SFE+V++IA++LEAESGGVLVS+DK +KGYAI+++RG+
Sbjct: 738  TIENMHLHWKHKELVKIIVRGKSFEQVKHIAISLEAESGGVLVSLDKTTKGYAIILYRGK 797

Query: 595  EYXXXXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
             Y               +ALARS+ELQR +AL +HIS LQ +V  L+SE
Sbjct: 798  NYQCPLPLRPRNLLTRRQALARSVELQRREALKHHISDLQEKVGLLKSE 846



 Score =  188 bits (478), Expect(2) = 2e-99
 Identities = 96/160 (60%), Positives = 118/160 (73%)
 Frame = -2

Query: 1676 DAPQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLI 1497
            D P  ES     D     +  E+   ++++ LLD LGPR+ DW G  PLPVDADLLP ++
Sbjct: 422  DFPSLESAEYLKD----LSQRELMALNDLNHLLDELGPRFKDWIGREPLPVDADLLPSVV 477

Query: 1496 SGYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSS 1317
             GYK PFRLLPYG R  L  ++ T  RRLAR +PPHFALG +R+ QGLA AM+KLWE+S+
Sbjct: 478  RGYKTPFRLLPYGFRPCLRDKDMTKYRRLARTVPPHFALGMNRELQGLANAMMKLWEKSA 537

Query: 1316 IAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            IAKIA+KRGVQ T +ERMAE+LKRLTGG LLSRNKDF+V+
Sbjct: 538  IAKIAIKRGVQNTCNERMAEELKRLTGGTLLSRNKDFIVF 577


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  181 bits (459), Expect(2) = 3e-77
 Identities = 87/138 (63%), Positives = 111/138 (80%)
 Frame = -2

Query: 1613 EVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLLPYGVRATLTIR 1434
            E +  +EVD LL+ LGPR++DW G  PLPVDADLLP ++ GY+ PFRLLPYG++  LT  
Sbjct: 320  EAQLAEEVDSLLEGLGPRFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTND 379

Query: 1433 EATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGVQLTTSERMAED 1254
            E T+L+RL R LP HF LGR+R+ QGLAA+++KLWE+  IAKIA+KRGVQ T SE MAE+
Sbjct: 380  EMTTLKRLGRPLPCHFVLGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEE 439

Query: 1253 LKRLTGGMLLSRNKDFLV 1200
            LKRLTGG LLSR+++F+V
Sbjct: 440  LKRLTGGTLLSRDREFIV 457



 Score =  136 bits (343), Expect(2) = 3e-77
 Identities = 83/230 (36%), Positives = 122/230 (53%), Gaps = 7/230 (3%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLD---SRWGKEL----GDEEKEKMMREAELLRHASLVRKLDNK 965
            E +D S  A T KE  D++   S  G +      +E+   + ++ +L      +++   +
Sbjct: 486  ERTDNSTSAETAKEAEDVEDGTSNSGSQDEFHGNNEQSYDLSKQRKLSFTKEAIKRTSIR 545

Query: 964  LGFXXXXXXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXX 785
            L              A++E S        D E +TDEER+M RK+GL+MK          
Sbjct: 546  LSMALEKKAKAVKLLAEIENSEMSQQPEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGV 605

Query: 784  XXGTVENMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVF 605
              GT+ENMHLHWKYRELVKII K +S   V  +A +LEAESGG+LV+V+++SKGYAIVV+
Sbjct: 606  FDGTIENMHLHWKYRELVKIICKERSLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVY 665

Query: 604  RGREYXXXXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLR 455
            RG+ Y               +A+ RS+E QR ++L  H+  L   +  L+
Sbjct: 666  RGKNYQRPALLRPPTLLSKREAMKRSLEAQRRESLKLHVLRLTRNINDLK 715


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  176 bits (447), Expect(2) = 3e-76
 Identities = 89/138 (64%), Positives = 106/138 (76%)
 Frame = -2

Query: 1613 EVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLLPYGVRATLTIR 1434
            E    +E + LLD LGPR+TDW G  PLPVD DLLP +I GY+ PFRLLPYGV+  LT  
Sbjct: 371  EAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTND 430

Query: 1433 EATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGVQLTTSERMAED 1254
            E T+LRRL R LP HF LGR+R+ QGLAA++VK WE+  IAK+A+KRGVQ T SE MAE+
Sbjct: 431  EMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEE 490

Query: 1253 LKRLTGGMLLSRNKDFLV 1200
            LK LTGG LLSR+KDF+V
Sbjct: 491  LKWLTGGTLLSRDKDFIV 508



 Score =  137 bits (346), Expect(2) = 3e-76
 Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
 Frame = -3

Query: 1117 SDASRFAGTLKETLDLDSRWGKEL----GDEEKEKMMREAELLRHA-SLVRKLDNKLGFX 953
            ++ S+   T +E +  D++ G E       +++     + + ++ A + +RK D KL   
Sbjct: 539  AECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDVKLSMA 598

Query: 952  XXXXXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGT 773
                       A++E++  P     D E +T EER+M RK+GLRMK            GT
Sbjct: 599  LEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGT 658

Query: 772  VENMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGRE 593
            VENMHLHWKYRELVKII K  + E V  +A  LEAESGG+LV+V+++SKGYAI+V+RG+ 
Sbjct: 659  VENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKN 718

Query: 592  YXXXXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
            Y               +A+ RS+E QR ++L  HI  L   V  L  +
Sbjct: 719  YERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQ 766


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  176 bits (447), Expect(2) = 3e-76
 Identities = 89/138 (64%), Positives = 106/138 (76%)
 Frame = -2

Query: 1613 EVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLLPYGVRATLTIR 1434
            E    +E + LLD LGPR+TDW G  PLPVD DLLP +I GY+ PFRLLPYGV+  LT  
Sbjct: 329  EAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTND 388

Query: 1433 EATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGVQLTTSERMAED 1254
            E T+LRRL R LP HF LGR+R+ QGLAA++VK WE+  IAK+A+KRGVQ T SE MAE+
Sbjct: 389  EMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEE 448

Query: 1253 LKRLTGGMLLSRNKDFLV 1200
            LK LTGG LLSR+KDF+V
Sbjct: 449  LKWLTGGTLLSRDKDFIV 466



 Score =  137 bits (346), Expect(2) = 3e-76
 Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
 Frame = -3

Query: 1117 SDASRFAGTLKETLDLDSRWGKEL----GDEEKEKMMREAELLRHA-SLVRKLDNKLGFX 953
            ++ S+   T +E +  D++ G E       +++     + + ++ A + +RK D KL   
Sbjct: 497  AECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDVKLSMA 556

Query: 952  XXXXXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGT 773
                       A++E++  P     D E +T EER+M RK+GLRMK            GT
Sbjct: 557  LEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGT 616

Query: 772  VENMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGRE 593
            VENMHLHWKYRELVKII K  + E V  +A  LEAESGG+LV+V+++SKGYAI+V+RG+ 
Sbjct: 617  VENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKN 676

Query: 592  YXXXXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
            Y               +A+ RS+E QR ++L  HI  L   V  L  +
Sbjct: 677  YERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQ 724


>gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus guttatus]
          Length = 1040

 Score =  179 bits (454), Expect(2) = 6e-76
 Identities = 92/148 (62%), Positives = 108/148 (72%)
 Frame = -2

Query: 1643 PDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLLP 1464
            PD    +   E     E D LL+ LGPR+TDW G  PLPVDADLLP ++ GYK PFRLLP
Sbjct: 325  PDRVRFQLPGEAEIVAEADSLLEGLGPRFTDWWGNDPLPVDADLLPAVVPGYKRPFRLLP 384

Query: 1463 YGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGVQ 1284
            YGV   LT  E T+LRRL R LP HFALGR+R+ QGLAA +VKLWE+  IAKIA+KRGVQ
Sbjct: 385  YGVNHKLTNDEMTTLRRLGRPLPIHFALGRNRKHQGLAACIVKLWEKCEIAKIAVKRGVQ 444

Query: 1283 LTTSERMAEDLKRLTGGMLLSRNKDFLV 1200
             T S  MAE+LK LTGG LLSR+++F+V
Sbjct: 445  NTNSVLMAEELKWLTGGTLLSRDREFIV 472



 Score =  134 bits (337), Expect(2) = 6e-76
 Identities = 84/232 (36%), Positives = 123/232 (53%), Gaps = 10/232 (4%)
 Frame = -3

Query: 1120 ESDASRF-AGTLKETLDLDSRWG-KELGDEEKEK-------MMREAELLRHA-SLVRKLD 971
            E DAS+  AG L    + + R G KE   E ++         +RE   +R + S + +  
Sbjct: 495  EIDASKTRAGNLSNLNEKEHRHGTKEYATEAEQHNEADQNLQVREKRRVRFSESAMERTS 554

Query: 970  NKLGFXXXXXXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXX 791
             KL               ++ +   P     D E +T+EER+M RK+GLRMKA       
Sbjct: 555  TKLSMALEKKARAEKLLEELAKEESPQPPETDKEGITEEERYMLRKVGLRMKAFLLLGRR 614

Query: 790  XXXXGTVENMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIV 611
                GTVENMHLHWKYRELVK+ +  +S EEV  +A  LEAESGG+LV+V+++SKG+ I+
Sbjct: 615  GVFDGTVENMHLHWKYRELVKVCIGNRSIEEVHGVARTLEAESGGILVAVERVSKGFDII 674

Query: 610  VFRGREYXXXXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLR 455
            V+RG+ Y               +A+ RS+E QR ++L  H+  L   + +L+
Sbjct: 675  VYRGKNYTRPASLRPQTLLSKREAMKRSLEAQRRESLKLHVLKLSKNIDELK 726


>gb|EYU32999.1| hypothetical protein MIMGU_mgv1a003183mg [Mimulus guttatus]
          Length = 602

 Score =  272 bits (695), Expect(2) = 2e-75
 Identities = 146/225 (64%), Positives = 169/225 (75%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXX 944
            E ++    AGTL+ETLD + RWGK+L  + K+K+M+EAE+LRHA+LVRKLD KL F    
Sbjct: 298  ENNNEFGVAGTLQETLDANDRWGKKLDQDHKQKVMKEAEVLRHANLVRKLDKKLAFADKK 357

Query: 943  XXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVEN 764
                    +KVEESL PAD TEDPE+++DEERFMFRKLGLRMKA           GTVEN
Sbjct: 358  LTKAERALSKVEESLNPADRTEDPENISDEERFMFRKLGLRMKAFLLLGRRGVFGGTVEN 417

Query: 763  MHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXX 584
            MHLHWKYRELVKIIVKA + EEV+NIAL+LEAESGGVLVSVDKISKGYAIVVFRGR+Y  
Sbjct: 418  MHLHWKYRELVKIIVKAPNIEEVKNIALSLEAESGGVLVSVDKISKGYAIVVFRGRDYKR 477

Query: 583  XXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                         KALARSIELQR +AL+NH+SALQ+RV QLRSE
Sbjct: 478  PPLLRPKNLLTKRKALARSIELQRREALLNHVSALQSRVNQLRSE 522



 Score = 40.0 bits (92), Expect(2) = 2e-75
 Identities = 14/30 (46%), Positives = 23/30 (76%)
 Frame = -2

Query: 377 FLDTADGENETVEENSDSIPNAYSETSFPY 288
           ++++ D EN+  +EN DS+ N+Y ET+FPY
Sbjct: 560 YIESYDSENDMADENDDSVENSYLETNFPY 589



 Score =  275 bits (702), Expect = 6e-71
 Identities = 134/159 (84%), Positives = 148/159 (93%), Gaps = 1/159 (0%)
 Frame = -2

Query: 1670 PQAESVSVNPDDE-NPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLIS 1494
            PQAES S + DD  NP+  SEV+YEDEVDKLLD+LGPRY DWPGEGPLPVDADLLPG++S
Sbjct: 93   PQAESASTDQDDSSNPKPLSEVKYEDEVDKLLDNLGPRYEDWPGEGPLPVDADLLPGVVS 152

Query: 1493 GYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSI 1314
            GY+PPFRLLPYGVR+TL ++E+T+LRRLAR+LPPHFALGRSRQ QGLAAAM+KLWERSSI
Sbjct: 153  GYRPPFRLLPYGVRSTLPMKESTALRRLARVLPPHFALGRSRQHQGLAAAMIKLWERSSI 212

Query: 1313 AKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
             KIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY
Sbjct: 213  VKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 251


>ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1053

 Score =  167 bits (423), Expect(2) = 3e-70
 Identities = 85/150 (56%), Positives = 107/150 (71%)
 Frame = -2

Query: 1646 NPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLL 1467
            +P+    +   EV+  DE DKLLD LGPR++ W G  PLPVDADLLP ++ G++ PFRLL
Sbjct: 375  SPNKFRLQLPGEVKVADEGDKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGFRRPFRLL 434

Query: 1466 PYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGV 1287
            P GV + LT RE T LRRLAR LP H+ALGRS   QGLA +M+KLWER  +AKIA+KRG 
Sbjct: 435  PSGVPSKLTDREMTILRRLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGA 494

Query: 1286 QLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
                SE ++E+LK LTGG LLSR+   +V+
Sbjct: 495  YCIDSELVSEELKGLTGGTLLSRDNKSIVF 524



 Score =  127 bits (318), Expect(2) = 3e-70
 Identities = 80/225 (35%), Positives = 122/225 (54%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXX 944
            EES +++ A  LK T D     G E  +E+ E    E  L    ++ + ++ +L      
Sbjct: 558  EESTSTQDASELKMTSDASVN-GHECHEEKNEG---ETSL---NTVAQNVEIRLSQAIVE 610

Query: 943  XXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVEN 764
                     ++E++  P+   E  E ++DEER+M RK+GL+MK            GT+EN
Sbjct: 611  KEKAEKLLEELEKASQPSK-AETREHISDEERYMLRKIGLQMKPFLLLGRRGVFDGTIEN 669

Query: 763  MHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXX 584
            MHLHWKYRELVKII K  S ++V   A  LE++SGG+LV+V+++SKG+AI+++RG+ Y  
Sbjct: 670  MHLHWKYRELVKIICKEHSMKDVEYAARTLESQSGGILVAVERVSKGHAIIMYRGKNYHR 729

Query: 583  XXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                          AL RS+E QR ++L  H+  L   +  LR +
Sbjct: 730  PSTLRPKSLLNKRDALKRSVEYQRQKSLKLHVLNLSKNIDYLRGQ 774


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
            gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
            1 [Theobroma cacao]
          Length = 876

 Score =  255 bits (652), Expect(2) = 2e-69
 Identities = 133/225 (59%), Positives = 163/225 (72%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXX 944
            E ++ S  AGTL ETLD D+RWGK L +  KEK+M+EAE+LRHA+LVRKLD  L F    
Sbjct: 570  EVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRK 629

Query: 943  XXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVEN 764
                     KVE+ L PAD   DPES+TDEERFMFRKLGLRMKA           GT+EN
Sbjct: 630  LLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 689

Query: 763  MHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXX 584
            MHLHWKYRELVKII+KA++F++V+ +ALALEAESGGVLVSVD+ISKGYAI+V+RG++Y  
Sbjct: 690  MHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQR 749

Query: 583  XXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                         +ALARSIELQR +AL+ H+SALQ +V ++RSE
Sbjct: 750  PSTIRPKNLLTKRRALARSIELQRREALVKHVSALQAKVDKIRSE 794



 Score = 36.2 bits (82), Expect(2) = 2e-69
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 377 FLDTADGENETVEENSDSIPNAYSETSFPYH 285
           +L+T + EN+  EEN + I N + ET FP+H
Sbjct: 832 YLETYESENDAEEENDELIHNLHLETKFPFH 862



 Score =  253 bits (647), Expect = 1e-64
 Identities = 120/159 (75%), Positives = 144/159 (90%)
 Frame = -2

Query: 1673 APQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLIS 1494
            +PQA S +    +++ E+  E+RYEDEVDKLL+ LGPRYTDWPG  PLPVDADLLPG+++
Sbjct: 367  SPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVA 426

Query: 1493 GYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSI 1314
            GY+PPFR+LPYGVR++L ++EATSLRRLAR+LPPHFA+GRSRQ QGLA AM+KLWE+SSI
Sbjct: 427  GYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSI 486

Query: 1313 AKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            AKIALKRGVQLTTSERMAED+K+LTGGMLLSRNKDFLV+
Sbjct: 487  AKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVF 525


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  260 bits (665), Expect = 1e-66
 Identities = 140/222 (63%), Positives = 163/222 (73%)
 Frame = -3

Query: 1114 DASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXXXX 935
            ++SR AGTL ETLD D+RWGK L D++KE +MREAELLRH  LVRKL+ KL F       
Sbjct: 584  NSSRTAGTLGETLDADARWGKRLDDKDKENVMREAELLRHGDLVRKLEKKLAFAERKLMK 643

Query: 934  XXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVENMHL 755
                 +KVEE+L P D   +P+SLTDEERFMFRKLGLRMKA           GTVENMHL
Sbjct: 644  AERVLSKVEETLNPLDRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHL 703

Query: 754  HWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXXXXX 575
            HWKYRELVKI+VKA++FE+V  IALALEAESGGVLVSVDK+SKGYAI+VFRG++Y     
Sbjct: 704  HWKYRELVKIMVKAKNFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPT 763

Query: 574  XXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                      KALARSIELQR +AL+ HISA+QTRV QL +E
Sbjct: 764  LRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAE 805



 Score =  260 bits (664), Expect = 1e-66
 Identities = 123/160 (76%), Positives = 144/160 (90%)
 Frame = -2

Query: 1676 DAPQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLI 1497
            D+ + +SV  + +++N +  SEV YEDEVDKLLD LGPRYTDWPG GPLPVDADLLPG++
Sbjct: 377  DSLREDSVDTSEENKNIDRQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIV 436

Query: 1496 SGYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSS 1317
             GY+PPFR+LPYGVR+TL  REAT+LRRLAR+LPPHFALGRSRQ QGLA+ MVKLW+RSS
Sbjct: 437  PGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSS 496

Query: 1316 IAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            IAKIA+KRGVQLTTSERMAED+K+LTGGMLLSRNKDFLV+
Sbjct: 497  IAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVF 536


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  259 bits (661), Expect = 3e-66
 Identities = 139/222 (62%), Positives = 162/222 (72%)
 Frame = -3

Query: 1114 DASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXXXX 935
            ++SR AGTL ETLD D+RWGK L D+ KE +MREAELLRH  LVRKL+ KL F       
Sbjct: 584  NSSRTAGTLGETLDADARWGKRLDDKHKENVMREAELLRHGDLVRKLEKKLAFAEKKLMK 643

Query: 934  XXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVENMHL 755
                 +KVEE+L P D   +P+SLTDEERFMFRKLGLRMKA           GTVENMHL
Sbjct: 644  AERVLSKVEETLNPLDRHAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHL 703

Query: 754  HWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXXXXX 575
            HWKYRELVKI+VKA++FE+V  IALALEAESGG+LVSVDK+SKGYAI+VFRG++Y     
Sbjct: 704  HWKYRELVKIMVKAKNFEQVSKIALALEAESGGILVSVDKVSKGYAIIVFRGKDYSRPPT 763

Query: 574  XXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                      KALARSIELQR +AL+ HISA+QTRV QL +E
Sbjct: 764  LRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAE 805



 Score =  258 bits (659), Expect = 6e-66
 Identities = 122/160 (76%), Positives = 144/160 (90%)
 Frame = -2

Query: 1676 DAPQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLI 1497
            D+ + +SV  + ++++ +  SEV YEDEVDKLLD LGPRYTDWPG GPLPVDADLLPG++
Sbjct: 377  DSLREDSVDTSEENKSIDRQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIV 436

Query: 1496 SGYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSS 1317
             GY+PPFR+LPYGVR+TL  REAT+LRRLAR+LPPHFALGRSRQ QGLA+ MVKLW+RSS
Sbjct: 437  PGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSS 496

Query: 1316 IAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            IAKIA+KRGVQLTTSERMAED+K+LTGGMLLSRNKDFLV+
Sbjct: 497  IAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVF 536


>ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355524889|gb|AET05343.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 676

 Score =  152 bits (383), Expect(2) = 1e-65
 Identities = 82/159 (51%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
 Frame = -2

Query: 1667 QAESVSVN---PDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLI 1497
            ++ESV +N   P++  PE       E E +++LD  GPR+ DW G G LPVDADLLP  I
Sbjct: 252  KSESVVLNQQQPENMTPE-------EAEFNRMLDDFGPRFVDWWGTGILPVDADLLPPTI 304

Query: 1496 SGYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSS 1317
             GY+ P R+LP  +   LT  E T + +LA+ LP HFALGR+R  QGLA A++KLWE+S 
Sbjct: 305  PGYRTPLRILPARMHPRLTNDEHTKMLKLAKALPCHFALGRNRNLQGLACAILKLWEKSL 364

Query: 1316 IAKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLV 1200
            +AKIA+K GVQ T +E MA +LK+LTGG LL RNK +++
Sbjct: 365  VAKIAVKLGVQNTNNELMALELKKLTGGTLLLRNKYYIL 403



 Score =  127 bits (318), Expect(2) = 1e-65
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 4/210 (1%)
 Frame = -3

Query: 1120 ESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXX 941
            E + S  AG++ E  +  +  G+E+  EE EKMM+EA    +  L++K++ K        
Sbjct: 436  EDETSAQAGSMAEFNEAQALCGREISTEECEKMMKEAAEATNVRLMKKIERKPAVIHEHT 495

Query: 940  XXXXXXXAK----VEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGT 773
                    K    ++ S+ P       E++TDEER MFR +GLR+K              
Sbjct: 496  DTKKSRAEKLLAKIDSSMVPVGPDNRRETITDEERVMFRVVGLRLKVYLQLDTLGVFDSV 555

Query: 772  VENMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGRE 593
            +ENMHLHW+ RELVK+I K +S   V   A  LE +SGG+LV++D++ KG++++ +RG++
Sbjct: 556  IENMHLHWRQRELVKLITKQKSLAFVEETASLLEYKSGGILVAIDRLPKGFSLIYYRGKD 615

Query: 592  YXXXXXXXXXXXXXXXKALARSIELQRSQA 503
            Y               KAL  SI +QR ++
Sbjct: 616  YKRPITLRHRNLLTKTKALQHSISMQRHES 645


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  247 bits (631), Expect(2) = 4e-65
 Identities = 132/217 (60%), Positives = 158/217 (72%)
 Frame = -3

Query: 1099 AGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXXXXXXXXX 920
            AGTL ETL+ D+RWGK L D +K+KM+++AE+ RHA+LVRKL+ +L              
Sbjct: 567  AGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENAL 626

Query: 919  AKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYR 740
            +KVEE L PA+   DPES+TDEERFMFRKLGLRMKA           GTVENMHLHWKYR
Sbjct: 627  SKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYR 686

Query: 739  ELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXXXXXXXXXX 560
            ELVKIIVKA++F++V+  ALALE+ESGGVLVSVDK+SKG+AIVVFRG++Y          
Sbjct: 687  ELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKN 746

Query: 559  XXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                 KALARSIELQR +AL NHISALQ  V +LRSE
Sbjct: 747  LLTKRKALARSIELQRREALYNHISALQRNVEKLRSE 783



 Score = 30.0 bits (66), Expect(2) = 4e-65
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 377 FLDTADGENETVEENSDSIPNAYSETSFPY 288
           +L+T   EN+   E+ +SI N + ET+FPY
Sbjct: 821 YLETYADENDGEHESDNSIHNHHIETNFPY 850



 Score =  251 bits (640), Expect = 9e-64
 Identities = 118/148 (79%), Positives = 137/148 (92%)
 Frame = -2

Query: 1640 DDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLLPY 1461
            D EN +T SEV+YEDE+DKLLD LGPRYTDWPG  PLP+DADLLPG I GY+PPFR+LPY
Sbjct: 367  DGENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPY 426

Query: 1460 GVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGVQL 1281
            GVR++L ++EAT+LRRLAR+LPPHFALGRSRQ +GLA AM+KLWERSSIAK+ALKRGVQL
Sbjct: 427  GVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQL 486

Query: 1280 TTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            TTSERMAED+K+LTGG+LLSRNKDFLV+
Sbjct: 487  TTSERMAEDIKKLTGGVLLSRNKDFLVF 514


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  247 bits (631), Expect(2) = 4e-65
 Identities = 132/217 (60%), Positives = 158/217 (72%)
 Frame = -3

Query: 1099 AGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXXXXXXXXX 920
            AGTL ETL+ D+RWGK L D +K+KM+++AE+ RHA+LVRKL+ +L              
Sbjct: 567  AGTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENAL 626

Query: 919  AKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYR 740
            +KVEE L PA+   DPES+TDEERFMFRKLGLRMKA           GTVENMHLHWKYR
Sbjct: 627  SKVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYR 686

Query: 739  ELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXXXXXXXXXX 560
            ELVKIIVKA++F++V+  ALALE+ESGGVLVSVDK+SKG+AIVVFRG++Y          
Sbjct: 687  ELVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKN 746

Query: 559  XXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                 KALARSIELQR +AL NHISALQ  V +LRSE
Sbjct: 747  LLTKRKALARSIELQRREALYNHISALQRNVEKLRSE 783



 Score = 30.0 bits (66), Expect(2) = 4e-65
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 377 FLDTADGENETVEENSDSIPNAYSETSFPY 288
           +L+T   EN+   E+ +SI N + ET+FPY
Sbjct: 821 YLETYADENDGEHESDNSIHNHHIETNFPY 850



 Score =  248 bits (633), Expect = 6e-63
 Identities = 117/148 (79%), Positives = 136/148 (91%)
 Frame = -2

Query: 1640 DDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISGYKPPFRLLPY 1461
            D EN +T SEV+YEDE+DKLLD LGPRYTDWP   PLP+DADLLPG I GY+PPFR+LPY
Sbjct: 367  DGENKDTESEVKYEDEIDKLLDGLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPY 426

Query: 1460 GVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIAKIALKRGVQL 1281
            GVR++L ++EAT+LRRLAR+LPPHFALGRSRQ +GLA AM+KLWERSSIAK+ALKRGVQL
Sbjct: 427  GVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQL 486

Query: 1280 TTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            TTSERMAED+K+LTGG+LLSRNKDFLV+
Sbjct: 487  TTSERMAEDIKKLTGGVLLSRNKDFLVF 514


>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
            gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
            4 [Theobroma cacao]
          Length = 645

 Score =  253 bits (647), Expect = 1e-64
 Identities = 120/159 (75%), Positives = 144/159 (90%)
 Frame = -2

Query: 1673 APQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLIS 1494
            +PQA S +    +++ E+  E+RYEDEVDKLL+ LGPRYTDWPG  PLPVDADLLPG+++
Sbjct: 367  SPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVA 426

Query: 1493 GYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSI 1314
            GY+PPFR+LPYGVR++L ++EATSLRRLAR+LPPHFA+GRSRQ QGLA AM+KLWE+SSI
Sbjct: 427  GYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSI 486

Query: 1313 AKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            AKIALKRGVQLTTSERMAED+K+LTGGMLLSRNKDFLV+
Sbjct: 487  AKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVF 525



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGF 956
            E ++ S  AGTL ETLD D+RWGK L +  KEK+M+EAE+LRHA+LVRKLD  L F
Sbjct: 570  EVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAF 625


>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
            gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
            3 [Theobroma cacao]
          Length = 856

 Score =  253 bits (647), Expect = 1e-64
 Identities = 120/159 (75%), Positives = 144/159 (90%)
 Frame = -2

Query: 1673 APQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLIS 1494
            +PQA S +    +++ E+  E+RYEDEVDKLL+ LGPRYTDWPG  PLPVDADLLPG+++
Sbjct: 367  SPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVA 426

Query: 1493 GYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSI 1314
            GY+PPFR+LPYGVR++L ++EATSLRRLAR+LPPHFA+GRSRQ QGLA AM+KLWE+SSI
Sbjct: 427  GYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSI 486

Query: 1313 AKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            AKIALKRGVQLTTSERMAED+K+LTGGMLLSRNKDFLV+
Sbjct: 487  AKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVF 525



 Score =  232 bits (592), Expect = 3e-58
 Identities = 122/206 (59%), Positives = 147/206 (71%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXX 944
            E ++ S  AGTL ETLD D+RWGK L +  KEK+M+EAE+LRHA+LVRKLD  L F    
Sbjct: 570  EVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRK 629

Query: 943  XXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVEN 764
                     KVE+ L PAD   DPES+TDEERFMFRKLGLRMKA           GT+EN
Sbjct: 630  LLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 689

Query: 763  MHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXX 584
            MHLHWKYRELVKII+KA++F++V+ +ALALEAESGGVLVSVD+ISKGYAI+V+RG++Y  
Sbjct: 690  MHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQR 749

Query: 583  XXXXXXXXXXXXXKALARSIELQRSQ 506
                         +ALARSIELQR +
Sbjct: 750  PSTIRPKNLLTKRRALARSIELQRRE 775


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
            gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
            2 [Theobroma cacao]
          Length = 685

 Score =  253 bits (647), Expect = 1e-64
 Identities = 120/159 (75%), Positives = 144/159 (90%)
 Frame = -2

Query: 1673 APQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLIS 1494
            +PQA S +    +++ E+  E+RYEDEVDKLL+ LGPRYTDWPG  PLPVDADLLPG+++
Sbjct: 367  SPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVA 426

Query: 1493 GYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSI 1314
            GY+PPFR+LPYGVR++L ++EATSLRRLAR+LPPHFA+GRSRQ QGLA AM+KLWE+SSI
Sbjct: 427  GYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSI 486

Query: 1313 AKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            AKIALKRGVQLTTSERMAED+K+LTGGMLLSRNKDFLV+
Sbjct: 487  AKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVF 525



 Score =  122 bits (306), Expect = 5e-25
 Identities = 63/104 (60%), Positives = 73/104 (70%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXX 944
            E ++ S  AGTL ETLD D+RWGK L +  KEK+M+EAE+LRHA+LVRKLD  L F    
Sbjct: 570  EVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRK 629

Query: 943  XXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKA 812
                     KVE+ L PAD   DPES+TDEERFMFRKLGLRMKA
Sbjct: 630  LLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKA 673


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  245 bits (625), Expect(2) = 2e-64
 Identities = 133/217 (61%), Positives = 159/217 (73%)
 Frame = -3

Query: 1099 AGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXXXXXXXXX 920
            AGTL ETLD D++WGK L   +KEK+MREA++LRHA LVRKL+ KL F            
Sbjct: 583  AGTLGETLDADAKWGKRL---DKEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQAL 639

Query: 919  AKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVENMHLHWKYR 740
            +KVEESL P+    DPES+TDEERFMFRKLGLRMKA           GTVENMHLHWKYR
Sbjct: 640  SKVEESLKPSKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYR 699

Query: 739  ELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXXXXXXXXXX 560
            ELVKI+V A++FE+V+NIALALEAESGGVLVSVDK+SK +AI+V+RG++Y          
Sbjct: 700  ELVKIMVNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKN 759

Query: 559  XXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                 KALARSIELQR +AL+ HISA+Q++V  LRSE
Sbjct: 760  LLTKRKALARSIELQRQEALLKHISAVQSKVDTLRSE 796



 Score = 30.0 bits (66), Expect(2) = 2e-64
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 377 FLDTADGENETVEENSDSIPNAYSETSFPY 288
           +L+T + ENE  +E + SI N   ET+FPY
Sbjct: 832 YLETYNRENEGEDEGNYSICNPQLETNFPY 861



 Score =  249 bits (635), Expect = 3e-63
 Identities = 119/158 (75%), Positives = 141/158 (89%)
 Frame = -2

Query: 1670 PQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISG 1491
            PQ +S + + + E+ E  +EV+YEDEVDKLLDSLGPR+ DWPG  PLPVDAD+LPG++ G
Sbjct: 373  PQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDADMLPGIVPG 432

Query: 1490 YKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIA 1311
            Y+PPFR+LPYGVR+TL ++EATSLRRLAR+LPPHFALGRSRQ QGLA AM KLWE+S IA
Sbjct: 433  YQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWEKSLIA 492

Query: 1310 KIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            KIALKRGVQLTTSERMAED+KRLTGG++LSRNKDFLV+
Sbjct: 493  KIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFLVF 530


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  252 bits (644), Expect = 3e-64
 Identities = 134/225 (59%), Positives = 164/225 (72%)
 Frame = -3

Query: 1123 EESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXX 944
            E  + S  AG+L+ETLD D++WGK L D  KEK++REAE++RHAS+VR+L+ KL F    
Sbjct: 548  EIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRK 607

Query: 943  XXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVEN 764
                     KVE  L P++   DPES+TDEERFMFRKLGLRMKA           GTVEN
Sbjct: 608  LRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVEN 667

Query: 763  MHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXX 584
            MHLHWKYRELVKII+KA+SFE+V+ IALALEAESGGVLVSVDKISKGYAI+V+RG++Y  
Sbjct: 668  MHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQR 727

Query: 583  XXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                         KALARSIE+QRS+AL NH+SAL+ +V ++RSE
Sbjct: 728  PSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKIRSE 772



 Score =  240 bits (612), Expect = 2e-60
 Identities = 114/158 (72%), Positives = 137/158 (86%)
 Frame = -2

Query: 1670 PQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISG 1491
            P+ E      + +  +T ++V+YEDEVDKLLD LGPRYTDWPG  PLPVDAD+LPG+I G
Sbjct: 346  PKTEINVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPG 405

Query: 1490 YKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIA 1311
            Y+PPFR+LPYGVR TL  +++TSLRRLAR+LPPHFA+GRSRQ QGLA AM+KLWE+SSI 
Sbjct: 406  YQPPFRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIV 465

Query: 1310 KIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            K+ALKRGVQLTTSERMAED+K+LTGG+LLSRNKDFLV+
Sbjct: 466  KVALKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVF 503


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  250 bits (639), Expect = 1e-63
 Identities = 131/223 (58%), Positives = 162/223 (72%)
 Frame = -3

Query: 1117 SDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXXXXX 938
            S+ S  AGTL ETLD D++WGK L +  K+K+MRE E LRHA+LV+KL+ KL F      
Sbjct: 546  SELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSFAERKLR 605

Query: 937  XXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVENMH 758
                   KVE  L P+++  DPES+TDEERFMFRKLGLRMKA           GT+ENMH
Sbjct: 606  RAEKALMKVESFLKPSEYKADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMH 665

Query: 757  LHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYXXXX 578
            LHWKYRELVKIIVKA++FE+V+ IALALEAESGGVLVSVDK+SKGY+++V+RG++Y    
Sbjct: 666  LHWKYRELVKIIVKAKTFEQVKKIALALEAESGGVLVSVDKVSKGYSVIVYRGKDYQRPS 725

Query: 577  XXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                       KALARSIELQR +AL+NHIS LQ++V ++RSE
Sbjct: 726  TLRPKNLLTKRKALARSIELQRHEALMNHISTLQSKVGRIRSE 768



 Score =  232 bits (592), Expect = 3e-58
 Identities = 115/159 (72%), Positives = 136/159 (85%)
 Frame = -2

Query: 1673 APQAESVSVNPDDENPETSSEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLIS 1494
            AP A+  S N D++  +   +V YE EVDKLLD LGPRYTDWPG  PLPVDAD+LP  + 
Sbjct: 342  APLAKLESTN-DEKERDYLPKVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDADMLPVTVP 400

Query: 1493 GYKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSI 1314
            GY+PPFR+LP+GVRATL +REAT+LRR+AR LPPHFALGR+RQ QGLA AM+KLWE SSI
Sbjct: 401  GYQPPFRVLPFGVRATLGLREATALRRIARTLPPHFALGRNRQLQGLAVAMIKLWEISSI 460

Query: 1313 AKIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            AK+ALKRGVQLTTSERMAE++K+LTGG+LLSRNKDFLV+
Sbjct: 461  AKVALKRGVQLTTSERMAEEIKKLTGGILLSRNKDFLVF 499


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  246 bits (627), Expect(2) = 2e-63
 Identities = 133/226 (58%), Positives = 159/226 (70%)
 Frame = -3

Query: 1126 IEESDASRFAGTLKETLDLDSRWGKELGDEEKEKMMREAELLRHASLVRKLDNKLGFXXX 947
            IE  + S  AGTLKETLD +SRWGK L D  KE ++REAE+ RHA LV+KL+ KL     
Sbjct: 602  IETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAER 661

Query: 946  XXXXXXXXXAKVEESLYPADHTEDPESLTDEERFMFRKLGLRMKAXXXXXXXXXXXGTVE 767
                     +KVEESL PA+   DPES+TDEERFMFRKLGLRMKA           GTVE
Sbjct: 662  KLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVE 721

Query: 766  NMHLHWKYRELVKIIVKAQSFEEVRNIALALEAESGGVLVSVDKISKGYAIVVFRGREYX 587
            NMHLHWKYRELVKIIVK ++F++ + IALALEAESGGVLVSVDKISKGYA+VV+RG++Y 
Sbjct: 722  NMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKISKGYAMVVYRGKDYQ 781

Query: 586  XXXXXXXXXXXXXXKALARSIELQRSQALINHISALQTRVRQLRSE 449
                          KALARSIELQR +AL+ H++ L++   +LRSE
Sbjct: 782  RPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 827



 Score = 26.2 bits (56), Expect(2) = 2e-63
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 377 FLDTADGENETVEENSDSIPNAYSETSFPYH 285
           +L+   G N+  +E  +S  N   E+ FPYH
Sbjct: 865 YLEMYAGGNDNEDEIDNSTHNLEMESDFPYH 895



 Score =  239 bits (611), Expect = 2e-60
 Identities = 117/158 (74%), Positives = 136/158 (86%), Gaps = 2/158 (1%)
 Frame = -2

Query: 1664 AESVSVNPDDENPETS--SEVRYEDEVDKLLDSLGPRYTDWPGEGPLPVDADLLPGLISG 1491
            A  V++    E  ET    EV+YEDEV+KLLD LGPRYTDWPG  PLPVDAD+LPG++ G
Sbjct: 401  ATQVNLETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPG 460

Query: 1490 YKPPFRLLPYGVRATLTIREATSLRRLARILPPHFALGRSRQQQGLAAAMVKLWERSSIA 1311
            Y+PPFR+LPYGVR+TL  +EAT+L+RLAR+LPPHFALGRSRQ QGLA AM+KLWE+SSIA
Sbjct: 461  YQPPFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIA 520

Query: 1310 KIALKRGVQLTTSERMAEDLKRLTGGMLLSRNKDFLVY 1197
            KIALKRGVQLTTSERM ED+K+LTGG LLSRNKDFLV+
Sbjct: 521  KIALKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVF 558