BLASTX nr result
ID: Mentha27_contig00005761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00005761
(2262 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 674 0.0
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 548 e-153
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 320 2e-84
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 320 2e-84
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise... 317 2e-83
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 316 3e-83
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 315 6e-83
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 310 2e-81
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 308 5e-81
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 306 2e-80
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 306 2e-80
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 306 2e-80
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 306 2e-80
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 303 2e-79
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 301 8e-79
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 289 3e-75
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 281 7e-73
ref|XP_002312652.1| RNA recognition motif-containing family prot... 277 2e-71
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 237 2e-59
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 237 2e-59
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 674 bits (1738), Expect = 0.0
Identities = 359/643 (55%), Positives = 398/643 (61%), Gaps = 6/643 (0%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MDPVTDEQLDYGDE Y GNQKMQYH GGAIPALAE+EMIG+ GEGF+Q
Sbjct: 1 MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60
Query: 392 MQRSDTQVPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKT 571
MQRS+ PS VGN+ SK PGT E +A QEVNN +V EG+YA QK
Sbjct: 61 MQRSEAPPPSAVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120
Query: 572 SLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPA 751
+L GGP Q +DASQR RLPEVA++SQA H GYQGS M HK A D+MNNSE ++GEPA
Sbjct: 121 NLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPA 180
Query: 752 PLMYTNMGNTKGAP--XXXXXXXXXXXXXXXXRSMDDEYMVRPS-VENGNTMLFVGELHW 922
L+Y N G++KG P RSMDDEY++RPS ENGN M++VGELHW
Sbjct: 181 SLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHW 240
Query: 923 WTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGR 1102
WTTDAE+ESVLIQYG+VKEIKFFDERASGKSKGYCQVEFYDP+AA+ACK+GM GH FNGR
Sbjct: 241 WTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGR 300
Query: 1103 ACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA-XXXXX 1279
ACVV +A P T KQMGASY NK RNP+ND AGRGNG NYPSGDA
Sbjct: 301 ACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFGR 359
Query: 1280 XXXXXXXXQPPNKXXXXXXXXXXXXI-NKNMI-XXXXXXXXXXXXXXXXXXXXXXXXXXX 1453
Q PN+ + NKNMI
Sbjct: 360 GGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMIGNAPGAGGGGAYGQGLNGPGFGGPPGMM 419
Query: 1454 XXXXXXXXXXDLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXX 1633
DLAFMGRG GYG FSGP F GMLPPF GVNSMGLPGVAPHVNPAFF
Sbjct: 420 HPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHVNPAFFGRGM 479
Query: 1634 XXXXXXXXXXXXXXXPHSGMWNDTNMGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGA 1813
PHSGMWND NMG WGGEEHGRESSYGGEDNASEYGYGE SHDK
Sbjct: 480 NPNGMGMMGNPGMVGPHSGMWNDPNMGGWGGEEHGRESSYGGEDNASEYGYGEGSHDKSV 539
Query: 1814 RSSAASREKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSG 1993
RSSAA REKE+ SER++ P K+ +SG
Sbjct: 540 RSSAAPREKERTSEREY---PERKHREERENDGERNDRDSKYREEKDRYREHRHKERESG 596
Query: 1994 YDDDWDKGQXXXXXXXXGAVPEDDHRSRSRDADYGKRRRLPSE 2122
YDDDWD+GQ GAV E+DHRSRSRDADYGKRRR+PSE
Sbjct: 597 YDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRMPSE 639
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 548 bits (1411), Expect = e-153
Identities = 308/648 (47%), Positives = 354/648 (54%), Gaps = 11/648 (1%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MDP DEQLDYGDE Y G+ KMQYH G IPALAE+EM+GE GEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60
Query: 392 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
+QRS+ VPSV GN Q K + P + G+ +E +A EG YA T FP QK
Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120
Query: 569 TSLPGPGGPPQTMDASQRGRLPEVAH--NSQAGHSGYQGSASMPHKNAADQMNNSEKVIG 742
+ DA+Q+ R + NSQAG+SGYQGS MP K AD M EK
Sbjct: 121 GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNAS 180
Query: 743 EPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHW 922
E PLM + + + P + E RPS+ENGNTMLFVGELHW
Sbjct: 181 EATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHW 240
Query: 923 WTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGR 1102
WTTDAE+ESVL QYG VKEIKFFDERASGKSKGYCQVEF+DP++A+ACKEGMNG++FNGR
Sbjct: 241 WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGR 300
Query: 1103 ACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDAXXXXXX 1282
ACVVAFATP TIKQMG+SY NK R P+N+ GRG P
Sbjct: 301 ACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNFGRG 360
Query: 1283 XXXXXXXQPPNKXXXXXXXXXXXXI-NKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1459
PN+ + +KNM+
Sbjct: 361 SWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGGAFGQGLAGPAFGGPPAGL 420
Query: 1460 XXXXXXXX---DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXX 1630
D +FMGRGAGYG FSGPAFPGM+PPF VN MGLPGVAPHVNPAFF
Sbjct: 421 MHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGRG 480
Query: 1631 XXXXXXXXXXXXXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASH 1801
PH GMW DT+ G WGGEEHG RESSYGGEDNASEYGYGE SH
Sbjct: 481 MAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSH 540
Query: 1802 DKGARSSAASREKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKD 1981
DKGARSSA SREKE+ SERDWS N K+
Sbjct: 541 DKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKE 600
Query: 1982 HDSGYDDDWDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
+S Y++D+D+GQ A E+DHRSRSRD +YGKRRR PSE
Sbjct: 601 RESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 320 bits (820), Expect = 2e-84
Identities = 171/358 (47%), Positives = 211/358 (58%), Gaps = 8/358 (2%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+DY +E Y G QKMQY GGAIPALA+EE++GE G+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 392 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
Q+ + PS VGN +Q K +VP ++ Q N V+ EG Y FP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 569 -----TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
+ P G G P SQ+G + E H++ + G+QGS S P + D N
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180
Query: 728 EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
+V EPAP++ +GA R+M +E +RP +ENG TMLFV
Sbjct: 181 GRVANEPAPVLNPGAAGPQGA---LIPANQMGVNINVNRAMVNENQIRPPLENGGTMLFV 237
Query: 908 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
GELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH
Sbjct: 238 GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297
Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
FNGR CVVAFA+P T+KQMGASY NK R P+ND GRG NY SGD
Sbjct: 298 VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355
Score = 225 bits (573), Expect = 8e-56
Identities = 115/220 (52%), Positives = 132/220 (60%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 439 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 498
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH GMW D++MG W GEEHG RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 499 SGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558
Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
EK++ SERDWS N +D DS YDD+
Sbjct: 559 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 618
Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
WD+G A+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 619 WDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 320 bits (819), Expect = 2e-84
Identities = 171/358 (47%), Positives = 211/358 (58%), Gaps = 8/358 (2%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+DY +E Y G QKMQY GGAIPALA+EE++GE G+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 392 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
Q+ + PS VGN +Q K +VP ++ Q N V+ EG Y FP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 569 -----TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
+ P G G P SQ+G + E H++ + G+QGS S P + D N
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180
Query: 728 EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
+V EPAP++ +GA R+M +E +RP +ENG TMLFV
Sbjct: 181 GRVANEPAPVLNPGAAGPQGA---LIPANQMGVNINVNRAMVNENQIRPPLENGGTMLFV 237
Query: 908 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
GELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH
Sbjct: 238 GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297
Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
FNGR CVVAFA+P T+KQMGASY NK R P+ND GRG NY SGD
Sbjct: 298 VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355
Score = 225 bits (574), Expect = 6e-56
Identities = 115/220 (52%), Positives = 132/220 (60%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 439 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 498
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH GMW D++MG W GEEHG RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 499 SGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558
Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
EK++ SERDWS N +D DS YDD+
Sbjct: 559 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 618
Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
WD+G A+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 619 WDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658
>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
Length = 508
Score = 317 bits (811), Expect = 2e-83
Identities = 182/354 (51%), Positives = 215/354 (60%), Gaps = 3/354 (0%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXX-GEGFL 388
M+P+ EQ D+G+E Y G QKMQY+QGGAIPALA+EEMIGE GE F+
Sbjct: 1 MEPMNGEQFDFGEEEYGGGQKMQYNQGGAIPALADEEMIGEEDDEYDDLYNDVNVGESFM 60
Query: 389 QMQRSDTQVPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
Q+QR D+Q+P + + N GT E + +E N K A + A FP QK
Sbjct: 61 QVQRPDSQIPPFKAEN-----RVNPSGTGDESIPSEEANASKYAGNRAFGPGALQFPEQK 115
Query: 569 TSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEP 748
L T+D SQ R NSQ SGYQGS + P+ DQ+ N +K +G+P
Sbjct: 116 AGLNTTEETSVTVDRSQTVR------NSQTDQSGYQGSVA-PNNKTEDQVKNMDKTVGDP 168
Query: 749 APLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWT 928
+ + +KGA R +DDEY S ENGNTML+VGELHWWT
Sbjct: 169 SSINPNVGVGSKGA--VPFNFMNMAANANAIRPVDDEYSNLGSSENGNTMLYVGELHWWT 226
Query: 929 TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRAC 1108
TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEF+DP+AA ACKEGMNG+ FNGRAC
Sbjct: 227 TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVFNGRAC 286
Query: 1109 VVAFATPHTIKQMGASYTNKXXXXXXXXXXXRN-PVND-AAGRGNGANYPSGDA 1264
VVAFATP TIKQMGASY N+ RN +ND AGRG G N+ GDA
Sbjct: 287 VVAFATPQTIKQMGASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNFSGGDA 340
Score = 123 bits (308), Expect = 4e-25
Identities = 61/96 (63%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Frame = +2
Query: 1484 DLAFMGRGAGYGN-FSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXX 1660
DLAFMGRGAGYG F+GPAFPGMLPPFP VN++GLPGVAPHVNPAFF
Sbjct: 413 DLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFFGRGMAPNGMGMMG 472
Query: 1661 XXXXXXPHSGMWNDTNM-GAWGGEEHGR--ESSYGG 1759
P+SG+WND ++ G WGGEE GR ESSYGG
Sbjct: 473 PSGMGGPYSGLWNDASVGGGWGGEEQGRGPESSYGG 508
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 316 bits (809), Expect = 3e-83
Identities = 175/358 (48%), Positives = 214/358 (59%), Gaps = 7/358 (1%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+D+GDE Y G QKMQY GAIPALA+EEM+GE GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 392 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
+QRS+ P +G++G+Q K P E Q +N V+ +G + A +P Q
Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120
Query: 569 ----TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSE 730
S P G G P SQ+GR+ E ++Q + G+QG +S HK D +
Sbjct: 121 GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQ 180
Query: 731 KVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVG 910
K+ PA + + G +GAP M E VRP +ENG TMLFVG
Sbjct: 181 KIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVN----HPMISENQVRPPIENGPTMLFVG 236
Query: 911 ELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHS 1090
ELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEFYDP++A+ACKEGM+G+
Sbjct: 237 ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYM 296
Query: 1091 FNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
FNGRACVVAFA+P T+KQMGASY NK R P ND GRG NY SGDA
Sbjct: 297 FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDA 353
Score = 206 bits (525), Expect = 3e-50
Identities = 111/220 (50%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG YG F GP FPGMLP FP VN++GL GVAPHVNPAFF
Sbjct: 435 DPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGG 494
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH GMW DT+MG WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 495 PGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 553
Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDH---DSGYDDD 2005
EKE+ S+R+WS N H D YDDD
Sbjct: 554 EKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 613
Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
D+GQ A+PE+ RSRSRD DYGKRRRLPSE
Sbjct: 614 LDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 315 bits (807), Expect = 6e-83
Identities = 170/351 (48%), Positives = 214/351 (60%), Gaps = 1/351 (0%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MDP+ +EQ+DY +E Y G QK+QY + GAIPALA+EE + E GEGFLQ
Sbjct: 1 MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 392 MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
M R + +P VGN G+Q K NVP ++G A QEV N + EG Y++ P QK
Sbjct: 61 MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSV----PEQK 116
Query: 569 TSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEP 748
P P ASQ+GR+ E+ H++Q + G+QG+A+M AD + + K+ P
Sbjct: 117 DQPPVSVVPEM---ASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGP 173
Query: 749 APLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWT 928
P M N G+ R M +E +RP VENG+ LFVGELHWWT
Sbjct: 174 IPSM--NSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWT 231
Query: 929 TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRAC 1108
TDAE+E VL Q+G++KEIKFFDERASGKSKGYCQV+FYDP+AASACKEGM+G+ FNGRAC
Sbjct: 232 TDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRAC 291
Query: 1109 VVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
VVAFA+ T+KQMG SY NK R P+ND AGRG N+ GD
Sbjct: 292 VVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGD 342
Score = 193 bits (491), Expect = 2e-46
Identities = 106/221 (47%), Positives = 121/221 (54%), Gaps = 8/221 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG F GP FPGMLP FPGVN+MGL GVAPHVNPAFF
Sbjct: 426 DPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMGS 485
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYG-YGEASHDKGARSSAAS 1831
H+ MWND +M W GEE RESSYGG+D SEYG YGEA+H+K RSSAA
Sbjct: 486 SGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVRSSAAP 545
Query: 1832 REKEKNSERDW---SSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDD 2002
RE+E+ SER+W S ++ D Y+D
Sbjct: 546 RERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRRRERDVAYED 605
Query: 2003 DWDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
D D+G A+PEDDHRSRSRD DYGKRRRLPSE
Sbjct: 606 DRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 310 bits (793), Expect = 2e-81
Identities = 166/355 (46%), Positives = 207/355 (58%), Gaps = 8/355 (2%)
Frame = +2
Query: 221 VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
+ +EQ+DY ++ Y G QKMQY GGAIPALA+EE++GE G+G LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60
Query: 401 SDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK--- 568
+ PS VGN +Q K +VP ++ Q N V+ EG Y + FP Q
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120
Query: 569 --TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKV 736
+ P G G P SQ+G + E H++ + G+QGS S P + D N +V
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180
Query: 737 IGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGEL 916
EPAP++ +GA R M +E +RP +ENG TMLFVGEL
Sbjct: 181 ANEPAPVLNPGAAGPQGA---LIPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237
Query: 917 HWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFN 1096
HWWTTDAE+ESVL QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FN
Sbjct: 238 HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297
Query: 1097 GRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
GR CVVAFA+P T+KQMGASY NK P+ND GRG NY SGD
Sbjct: 298 GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352
Score = 229 bits (585), Expect = 3e-57
Identities = 117/220 (53%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 495
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH GMW D++MG W GEEHG RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 496 SGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 555
Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
EK++ SERDWS N +D DS YDD+
Sbjct: 556 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 615
Query: 2006 WDKGQ-XXXXXXXXGAVPEDDHRSRSRDADYGKRRRLPSE 2122
WD+GQ GA+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 616 WDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 308 bits (790), Expect = 5e-81
Identities = 165/355 (46%), Positives = 206/355 (58%), Gaps = 8/355 (2%)
Frame = +2
Query: 221 VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
+ +EQ+DY ++ Y G QKMQY GGAIPALA+EE++GE G+G LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60
Query: 401 SDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK--- 568
+ PS VGN +Q K +VP ++ Q N V+ EG Y + FP Q
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120
Query: 569 --TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKV 736
+ P G G P SQ+G + E H++ + G+QGS S P + D N +
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180
Query: 737 IGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGEL 916
EPAP++ +GA R M +E +RP +ENG TMLFVGEL
Sbjct: 181 ANEPAPVLNPGAAGPQGA---LIPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237
Query: 917 HWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFN 1096
HWWTTDAE+ESVL QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FN
Sbjct: 238 HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297
Query: 1097 GRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
GR CVVAFA+P T+KQMGASY NK P+ND GRG NY SGD
Sbjct: 298 GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352
Score = 229 bits (585), Expect = 3e-57
Identities = 117/220 (53%), Positives = 133/220 (60%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 436 DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 495
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH GMW D++MG W GEEHG RESSYGG+D AS+YGYGEASH+KGARS+ ASR
Sbjct: 496 SGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTASR 555
Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
EK++ SERDWS N +D DS YDD+
Sbjct: 556 EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 615
Query: 2006 WDKGQ-XXXXXXXXGAVPEDDHRSRSRDADYGKRRRLPSE 2122
WD+GQ GA+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 616 WDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 306 bits (785), Expect = 2e-80
Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+D+GDE Y G QKMQY GAIPALA+EEM+GE GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 392 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 569 TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
P P P SQ+G + E H+ Q + G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 728 EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
+K+ +PA + + G +G P + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235
Query: 908 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
FNGRACVVAFA+P T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 172 bits (437), Expect = 5e-40
Identities = 83/133 (62%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH+GMW D +MG WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1835 EKEKNSERDWSSN 1873
EKE+ SER+WS N
Sbjct: 553 EKERVSEREWSGN 565
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 306 bits (785), Expect = 2e-80
Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+D+GDE Y G QKMQY GAIPALA+EEM+GE GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 392 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 569 TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
P P P SQ+G + E H+ Q + G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 728 EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
+K+ +PA + + G +G P + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235
Query: 908 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
FNGRACVVAFA+P T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 196 bits (497), Expect = 5e-47
Identities = 104/215 (48%), Positives = 120/215 (55%), Gaps = 7/215 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH+GMW D +MG WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDH---DSGYDDD 2005
EKE+ SER+WS N H D YDDD
Sbjct: 553 EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612
Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRR 2107
WD+GQ A+PE++HRSRSRD Y + +
Sbjct: 613 WDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 306 bits (785), Expect = 2e-80
Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+D+GDE Y G QKMQY GAIPALA+EEM+GE GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 392 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 569 TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
P P P SQ+G + E H+ Q + G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 728 EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
+K+ +PA + + G +G P + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235
Query: 908 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
FNGRACVVAFA+P T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 172 bits (437), Expect = 5e-40
Identities = 83/133 (62%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH+GMW D +MG WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1835 EKEKNSERDWSSN 1873
EKE+ SER+WS N
Sbjct: 553 EKERVSEREWSGN 565
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 306 bits (785), Expect = 2e-80
Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MD + +EQ+D+GDE Y G QKMQY GAIPALA+EEM+GE GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 392 MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
+QRS+ + P +G++G++ + P +E Q +N V+ +G + +A +P +K
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119
Query: 569 TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
P P P SQ+G + E H+ Q + G+QG S +K D
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 728 EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
+K+ +PA + + G +G P + +E V+P +ENG TMLFV
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235
Query: 908 GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236 GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295
Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
FNGRACVVAFA+P T+KQMGASY NK R P N+ GRG NY SGDA
Sbjct: 296 MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353
Score = 214 bits (546), Expect = 1e-52
Identities = 113/220 (51%), Positives = 128/220 (58%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 434 DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
PH+GMW D +MG WGG+EHG RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494 SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552
Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDH---DSGYDDD 2005
EKE+ SER+WS N H D YDDD
Sbjct: 553 EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612
Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
WD+GQ A+PE++HRSRSRD DYGK+RRLPSE
Sbjct: 613 WDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 303 bits (777), Expect = 2e-79
Identities = 174/351 (49%), Positives = 208/351 (59%), Gaps = 3/351 (0%)
Frame = +2
Query: 221 VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
+ DEQ+DY DE Y G QK+QY GAIPALAEEEM GE GE FLQM R
Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59
Query: 401 SDTQ-VPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSL 577
S+ P VGN G Q +N +E Q +N VA E Y+ T FP Q
Sbjct: 60 SEAPPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKYS-TGTHFPEQNVKG 116
Query: 578 P--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPA 751
P G G P +Q+ R+ E+ ++SQA + G+QGS S P D + + K+ +P
Sbjct: 117 PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPT 176
Query: 752 PLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTT 931
P+ N G + P RS +E +RP +ENG+TML+VGELHWWTT
Sbjct: 177 PV--PNAGVPRVIPQLPASQMNMNMDTN--RSATNENQIRPPLENGSTMLYVGELHWWTT 232
Query: 932 DAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACV 1111
DAE+E+VL QYG VKEIKFFDERASGKSKGYCQVEFYD +AA+ACKEGMNGH FNGRACV
Sbjct: 233 DAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACV 292
Query: 1112 VAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
VAFA+ T+KQMGASY NK R P+ND AGRG NY GDA
Sbjct: 293 VAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDA 343
Score = 224 bits (572), Expect = 1e-55
Identities = 117/219 (53%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRGAGYG F+GP FPGMLP FP VN+MGL GVAPHVNPAFF
Sbjct: 426 DPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGP 485
Query: 1664 XXXXXPHSGMWNDTNMGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASRE 1837
P++GMW+DT+MG WG E RESSYGG+D ASEYGYGE +H+KGARSSAASRE
Sbjct: 486 SGMDGPNAGMWSDTSMGGWGEEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAASRE 545
Query: 1838 KEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDW 2008
KE+ SERDWS N ++ DSGY+DDW
Sbjct: 546 KERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYEDDW 605
Query: 2009 DKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
D+GQ AVPE+D+RSRSRDADYGKRRRLPSE
Sbjct: 606 DRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 301 bits (771), Expect = 8e-79
Identities = 170/361 (47%), Positives = 210/361 (58%), Gaps = 13/361 (3%)
Frame = +2
Query: 221 VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
+ +EQLDY DE Y G QKM + GGAI ALA++E++GE GEGFLQM R
Sbjct: 1 MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60
Query: 401 SDTQVPS-VVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYA------------A 541
S+ PS V+ Q K +VP LE Q + V+ EG Y+ A
Sbjct: 61 SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMA 120
Query: 542 TAAPFPVQKTSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMN 721
P + L GP SQ+GR+ E+ H++Q + G+QGS +P K A+ +
Sbjct: 121 VKGPEMGSTSHLDGPS-------VSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSD 173
Query: 722 NSEKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTML 901
K+ E P++ + G + P R M +E +RP+V+NG TML
Sbjct: 174 VHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVN--RPMVNENQIRPAVDNGATML 231
Query: 902 FVGELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMN 1081
FVGELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEFYD SAA+ACKEGMN
Sbjct: 232 FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMN 291
Query: 1082 GHSFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
G+ FNGRACVVAFA+P T+KQMGASY NK R P+ND GRG G N GD
Sbjct: 292 GYIFNGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQGRRPMNDGVGRGGGMNMQGGD 349
Query: 1262 A 1264
A
Sbjct: 350 A 350
Score = 214 bits (546), Expect = 1e-52
Identities = 109/217 (50%), Positives = 126/217 (58%), Gaps = 4/217 (1%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG YG FSG AFPGM+P FP VN+MGL GVAPHVNPAFF
Sbjct: 431 DPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGA 490
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
H+GMW DT+MG WGGEEHG RESSYGG+D AS+YGYGE +H+K RS+ ASR
Sbjct: 491 TGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASR 550
Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWDK 2014
EKE+ SERDWS N ++ D +DDWD+
Sbjct: 551 EKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDR 610
Query: 2015 GQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
GQ AV ++DHRSRSRD DYGKRRRLPSE
Sbjct: 611 GQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 289 bits (740), Expect = 3e-75
Identities = 164/348 (47%), Positives = 202/348 (58%), Gaps = 1/348 (0%)
Frame = +2
Query: 221 VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
+ +EQ+DY DE Y G QK+QY GAI ALA+EE + E EGFLQM R
Sbjct: 1 MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60
Query: 401 SDTQVP-SVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSL 577
S+ +P VGN G+Q K +V T ++ QE V+ +G Y++ A FP Q+
Sbjct: 61 SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ--- 117
Query: 578 PGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPAPL 757
G PP VA + G +GY GS +MP D + + K E P
Sbjct: 118 ---GQPP-------------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPS 160
Query: 758 MYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTTDA 937
M N G R M +E +RP VENG+TMLFVGELHWWTTDA
Sbjct: 161 M--NSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDA 218
Query: 938 EIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVA 1117
E+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+DP+AA+ACKEGM+G+ FNGRACVVA
Sbjct: 219 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVA 278
Query: 1118 FATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
FA+P T+KQMGASY +K R P+N+ GRG G NY +GD
Sbjct: 279 FASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGD 326
Score = 224 bits (571), Expect = 1e-55
Identities = 115/221 (52%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG F GPAFPGML FP VN+MGL GVAPHVNPAFF
Sbjct: 410 DPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGS 469
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
H+GMWND +MG WGG+EHG RESSYGG+D ASEYGYGEA+H+KG RS+A SR
Sbjct: 470 SGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSR 529
Query: 1835 EKEKNSERDWSSNP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDD 2002
E+E+ SERDWS N ++ D GY+D
Sbjct: 530 ERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYED 589
Query: 2003 DWDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
DWD+GQ A+PEDDHRSRSRD DYGKRRRLPSE
Sbjct: 590 DWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 281 bits (720), Expect = 7e-73
Identities = 159/354 (44%), Positives = 207/354 (58%), Gaps = 7/354 (1%)
Frame = +2
Query: 221 VTDEQLDYGDEGYAGNQKMQYH-QGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQ 397
+ ++ +D+ DE Y G QK QY GGAI ALA+EE++G+ GEGFLQ+Q
Sbjct: 1 MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60
Query: 398 RSDT-QVPSVVG-NSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKT 571
RS+ +P+ G +G+Q K N P E Q+ N V+ EG +++ + FP Q+
Sbjct: 61 RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD 120
Query: 572 SLPGPGGPPQTMDASQRGRL--PEVAHNSQAGH--SGYQGSASMPHKNAADQMNNSEKVI 739
L + S+ G + P+ A SQ G +G+QGS M H D + K++
Sbjct: 121 GL-------KVDKKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMV 173
Query: 740 GEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELH 919
EP + N G + +E +RPS+ENG+TMLFVGELH
Sbjct: 174 NEP--IQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGELH 231
Query: 920 WWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNG 1099
WWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVE+YD +AA ACKEGM+GH FNG
Sbjct: 232 WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNG 291
Query: 1100 RACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
RACVVAFA+P T+KQMGA+Y +K R P+ND GRG N+ SGD
Sbjct: 292 RACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGD 345
Score = 192 bits (488), Expect = 6e-46
Identities = 103/220 (46%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG F+GPAFPGMLP FP VN+MG VAPHVNPAFF
Sbjct: 425 DPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFFGRGMTNNGMGMVGS 484
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
GMWND ++G WGGEEHG RESSYGG+D ASEYGYG+ +H+KG R
Sbjct: 485 SLMDGHQGGMWNDPSIGGWGGEEHGRRTRESSYGGDDGASEYGYGDTNHEKGGR------ 538
Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
E+ SERDWS N K+ + Y+DD
Sbjct: 539 --ERGSERDWSGNSERRNHEERDQDWDRSQKEQKEHRYREGKDGSRDYRPKERELDYEDD 596
Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
WD+GQ V ED HRSRSRD DYGKRRRLPSE
Sbjct: 597 WDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 277 bits (708), Expect = 2e-71
Identities = 158/340 (46%), Positives = 191/340 (56%), Gaps = 5/340 (1%)
Frame = +2
Query: 257 YAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQRSDTQVP-SVVGN 433
Y +KMQY GAIPALAEEEM GE GE FLQM S+ P + VGN
Sbjct: 3 YEEEEKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGN 61
Query: 434 SGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPG----GPPQ 601
G Q A+ G + A EG Y+ A FP QK GP
Sbjct: 62 GGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPVD 121
Query: 602 TMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPAPLMYTNMGNT 781
+Q+GR+ E++H+ Q + G+Q S +P D + S K EP PL T
Sbjct: 122 GSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGP 181
Query: 782 KGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAEIESVLIQ 961
+GAP R + +E VRP +ENG+T L+VGELHWWTTDAE+ES Q
Sbjct: 182 RGAPQMQVNQMHMSADVN--RPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQ 239
Query: 962 YGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPHTIK 1141
+G+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMNGH FNGR CVVAFA+P T+K
Sbjct: 240 FGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLK 299
Query: 1142 QMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
QMGASY NK R +ND AGRG AN+ SGD
Sbjct: 300 QMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGD 339
Score = 189 bits (479), Expect = 6e-45
Identities = 101/214 (47%), Positives = 116/214 (54%), Gaps = 1/214 (0%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG F+GP FPGMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 421 DPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMVS 480
Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGARSSAASREKE 1843
P+ GMW ESSY G++ ASEYGYGE +H+KGARSS ASREKE
Sbjct: 481 SGMDGPNPGMW---------------ESSYDGDEGASEYGYGEGNHEKGARSSGASREKE 525
Query: 1844 KNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWDKGQX 2023
+ SERDWS N ++ DSGY+DD D+G
Sbjct: 526 RGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDSGYEDDRDRGHS 585
Query: 2024 XXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
A PE+D+RSR+RD DYGKRRRLPSE
Sbjct: 586 SSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 237 bits (605), Expect = 2e-59
Identities = 143/332 (43%), Positives = 170/332 (51%), Gaps = 1/332 (0%)
Frame = +2
Query: 269 QKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQRSDTQVP-SVVGNSGIQ 445
+KMQY GAIPALAEEE+ GE GE FLQM S+ P + GN G Q
Sbjct: 7 EKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQ 65
Query: 446 NSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPGGPPQTMDASQRG 625
A+ G + + VA EG Y+ A FP QK + G
Sbjct: 66 TRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIG-------------- 111
Query: 626 RLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPAPLMYTNMGNTKGAPXXXX 805
+ G GY +S+ K +A P M N N
Sbjct: 112 -----VEANDVGSIGYGDGSSVAQKGSAGPRG---------VPQMQVNQMNMNA------ 151
Query: 806 XXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAEIESVLIQYGKVKEIK 985
R + +E VRP +ENG T L+VGELHWWTTDAE+ESV QYG+VKEIK
Sbjct: 152 ---------DVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIK 202
Query: 986 FFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPHTIKQMGASYTN 1165
FFDERASGKSKGYCQV+FY+ +AA+ACKEGMN H FNGR CVVAFA+ T+KQMGASY +
Sbjct: 203 FFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMS 262
Query: 1166 KXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
K R +ND GRG ANY SGD
Sbjct: 263 KTQGQPQPQSQGRGSMNDGMGRGGNANYQSGD 294
Score = 201 bits (512), Expect = 9e-49
Identities = 107/216 (49%), Positives = 121/216 (56%), Gaps = 3/216 (1%)
Frame = +2
Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
D +MGRG GYG F G FPGMLP FP VNSMGL GVAPHVNPAFF
Sbjct: 376 DPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMAS 435
Query: 1664 XXXXXPHSGMWNDTNMGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASRE 1837
P+ G W DT+MG WG E RESSY G++ ASEYGYGE +H+KGARSS ASRE
Sbjct: 436 SGMEGPNPGKWPDTSMGGWGEEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGASRE 495
Query: 1838 KEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWDKG 2017
KE+ SERDWS N ++ DSGY+DD D+G
Sbjct: 496 KERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRG 555
Query: 2018 QXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
A PE+D+RSRSRD DYGKRRR PSE
Sbjct: 556 HSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 591
>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
gi|548855834|gb|ERN13697.1| hypothetical protein
AMTR_s00049p00146760 [Amborella trichopoda]
Length = 659
Score = 237 bits (605), Expect = 2e-59
Identities = 148/372 (39%), Positives = 191/372 (51%), Gaps = 22/372 (5%)
Frame = +2
Query: 212 MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
MDP+ +EQLDY DE Y NQKM + GGAI ALA+EE++GE G+GF+Q
Sbjct: 1 MDPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQ 60
Query: 392 MQRSDTQVPSVVGNSGIQNSKA---NVPGTHLEGVALQE-------------VNNVKVAE 523
+ V +G+Q K + P ++ GV +E ++ K +
Sbjct: 61 SLQHQEPVQYESMGNGVQAPKEEPISTPPVNIPGVGHEEKGEKDAKLSGFSDLDQKKAFQ 120
Query: 524 EGNYAATAAPFPVQKTSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMP-HK 700
E A K + P PQ + R A A SG+ + +M +K
Sbjct: 121 EQASNQLAGASSGLKIRVSEPVSEPQPQASGFRN-----APAPPAKGSGFNTAGAMDANK 175
Query: 701 NAADQMNNSEKVIGE-PAPLM----YTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYM 865
A +N+ +G P P + NM G S + +
Sbjct: 176 QLAQTSSNAVPRVGPGPGPGIGAGPNANMNRMMGPGPNQAGAVIDTSARFG--SENSNRL 233
Query: 866 VRPSVENGNTMLFVGELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYD 1045
E+GNTMLFVGEL WWTTDAE+ESVL QYG+VK++KFFDERASGKSKGYCQVEFYD
Sbjct: 234 SHGGGESGNTMLFVGELQWWTTDAELESVLSQYGRVKDLKFFDERASGKSKGYCQVEFYD 293
Query: 1046 PSAASACKEGMNGHSFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAA 1225
P+AA+ACKE MNGH FNGRACVVAFA+ HT+KQ+ +Y NK R P+ND
Sbjct: 294 PAAAAACKESMNGHVFNGRACVVAFASQHTLKQLTTNYLNKTQAQAQAQSQGRRPMNDGG 353
Query: 1226 GRGNGANYPSGD 1261
GR G +Y GD
Sbjct: 354 GRAGGPSYQGGD 365
Score = 175 bits (443), Expect = 9e-41
Identities = 95/218 (43%), Positives = 118/218 (54%), Gaps = 7/218 (3%)
Frame = +2
Query: 1490 AFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1669
A +GRG+GYG FSGP FPGMLP F + ++GLPGVAPHVNPAFF
Sbjct: 446 AHLGRGSGYGGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGA 505
Query: 1670 XXXPHSGMWNDTNMG---AWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAAS 1831
H GMW D++MG WG EEHG RESSY G+D AS+YGYG+ H++G S
Sbjct: 506 MDGHHGGMWGDSSMGGGVGWGNEEHGRRTRESSY-GDDGASDYGYGDGGHERGGGRSNPG 564
Query: 1832 REKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWD 2011
REK++ SERDWSS P ++ D +DDWD
Sbjct: 565 REKDRGSERDWSSGP---ERRHRDDRDSDWDRDPRYKDEKDGYSDHRQRERDWDNEDDWD 621
Query: 2012 KGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
+G+ + E+D RSRS+D DYGKRRR+PSE
Sbjct: 622 RGRTSSRSRSKSRMMQEEDQRSRSKDVDYGKRRRVPSE 659