BLASTX nr result

ID: Mentha27_contig00005761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00005761
         (2262 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus...   674   0.0  
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   548   e-153
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   320   2e-84
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   320   2e-84
gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlise...   317   2e-83
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   316   3e-83
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   315   6e-83
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   310   2e-81
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   308   5e-81
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   306   2e-80
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   306   2e-80
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   306   2e-80
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   306   2e-80
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   303   2e-79
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   301   8e-79
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   289   3e-75
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   281   7e-73
ref|XP_002312652.1| RNA recognition motif-containing family prot...   277   2e-71
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   237   2e-59
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A...   237   2e-59

>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
          Length = 639

 Score =  674 bits (1738), Expect = 0.0
 Identities = 359/643 (55%), Positives = 398/643 (61%), Gaps = 6/643 (0%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MDPVTDEQLDYGDE Y GNQKMQYH GGAIPALAE+EMIG+             GEGF+Q
Sbjct: 1    MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 392  MQRSDTQVPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKT 571
            MQRS+   PS VGN+    SK   PGT  E +A QEVNN +V  EG+YA        QK 
Sbjct: 61   MQRSEAPPPSAVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120

Query: 572  SLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPA 751
            +L   GGP Q +DASQR RLPEVA++SQA H GYQGS  M HK A D+MNNSE ++GEPA
Sbjct: 121  NLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPA 180

Query: 752  PLMYTNMGNTKGAP--XXXXXXXXXXXXXXXXRSMDDEYMVRPS-VENGNTMLFVGELHW 922
             L+Y N G++KG P                  RSMDDEY++RPS  ENGN M++VGELHW
Sbjct: 181  SLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHW 240

Query: 923  WTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGR 1102
            WTTDAE+ESVLIQYG+VKEIKFFDERASGKSKGYCQVEFYDP+AA+ACK+GM GH FNGR
Sbjct: 241  WTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGR 300

Query: 1103 ACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA-XXXXX 1279
            ACVV +A P T KQMGASY NK           RNP+ND AGRGNG NYPSGDA      
Sbjct: 301  ACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSGDAGRNFGR 359

Query: 1280 XXXXXXXXQPPNKXXXXXXXXXXXXI-NKNMI-XXXXXXXXXXXXXXXXXXXXXXXXXXX 1453
                    Q PN+            + NKNMI                            
Sbjct: 360  GGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMIGNAPGAGGGGAYGQGLNGPGFGGPPGMM 419

Query: 1454 XXXXXXXXXXDLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXX 1633
                      DLAFMGRG GYG FSGP F GMLPPF GVNSMGLPGVAPHVNPAFF    
Sbjct: 420  HPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGLPGVAPHVNPAFFGRGM 479

Query: 1634 XXXXXXXXXXXXXXXPHSGMWNDTNMGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGA 1813
                           PHSGMWND NMG WGGEEHGRESSYGGEDNASEYGYGE SHDK  
Sbjct: 480  NPNGMGMMGNPGMVGPHSGMWNDPNMGGWGGEEHGRESSYGGEDNASEYGYGEGSHDKSV 539

Query: 1814 RSSAASREKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSG 1993
            RSSAA REKE+ SER++   P                                 K+ +SG
Sbjct: 540  RSSAAPREKERTSEREY---PERKHREERENDGERNDRDSKYREEKDRYREHRHKERESG 596

Query: 1994 YDDDWDKGQXXXXXXXXGAVPEDDHRSRSRDADYGKRRRLPSE 2122
            YDDDWD+GQ        GAV E+DHRSRSRDADYGKRRR+PSE
Sbjct: 597  YDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRMPSE 639


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  548 bits (1411), Expect = e-153
 Identities = 308/648 (47%), Positives = 354/648 (54%), Gaps = 11/648 (1%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MDP  DEQLDYGDE Y G+ KMQYH  G IPALAE+EM+GE             GEGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 392  MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            +QRS+  VPSV  GN   Q  K + P +   G+  +E     +A EG YA T   FP QK
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120

Query: 569  TSLPGPGGPPQTMDASQRGRLPEVAH--NSQAGHSGYQGSASMPHKNAADQMNNSEKVIG 742
                      +  DA+Q+ R   +    NSQAG+SGYQGS  MP K  AD M   EK   
Sbjct: 121  GEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNAS 180

Query: 743  EPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHW 922
            E  PLM + +   +  P                  +  E   RPS+ENGNTMLFVGELHW
Sbjct: 181  EATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHW 240

Query: 923  WTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGR 1102
            WTTDAE+ESVL QYG VKEIKFFDERASGKSKGYCQVEF+DP++A+ACKEGMNG++FNGR
Sbjct: 241  WTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGR 300

Query: 1103 ACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDAXXXXXX 1282
            ACVVAFATP TIKQMG+SY NK           R P+N+  GRG     P          
Sbjct: 301  ACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPNYTPGDAGRNFGRG 360

Query: 1283 XXXXXXXQPPNKXXXXXXXXXXXXI-NKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1459
                     PN+            + +KNM+                             
Sbjct: 361  SWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGGAFGQGLAGPAFGGPPAGL 420

Query: 1460 XXXXXXXX---DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXX 1630
                       D +FMGRGAGYG FSGPAFPGM+PPF  VN MGLPGVAPHVNPAFF   
Sbjct: 421  MHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGRG 480

Query: 1631 XXXXXXXXXXXXXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASH 1801
                            PH GMW DT+ G WGGEEHG   RESSYGGEDNASEYGYGE SH
Sbjct: 481  MAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSH 540

Query: 1802 DKGARSSAASREKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKD 1981
            DKGARSSA SREKE+ SERDWS N                                  K+
Sbjct: 541  DKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHRYREERDGYRDYRQKE 600

Query: 1982 HDSGYDDDWDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
             +S Y++D+D+GQ          A  E+DHRSRSRD +YGKRRR PSE
Sbjct: 601  RESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  320 bits (820), Expect = 2e-84
 Identities = 171/358 (47%), Positives = 211/358 (58%), Gaps = 8/358 (2%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+DY +E Y G QKMQY  GGAIPALA+EE++GE             G+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 392  MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
             Q+ +   PS  VGN  +Q  K +VP   ++    Q  N   V+ EG Y      FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 569  -----TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
                  + P  G G  P     SQ+G + E  H++   + G+QGS S P +   D  N  
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180

Query: 728  EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
             +V  EPAP++       +GA                 R+M +E  +RP +ENG TMLFV
Sbjct: 181  GRVANEPAPVLNPGAAGPQGA---LIPANQMGVNINVNRAMVNENQIRPPLENGGTMLFV 237

Query: 908  GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
            GELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH
Sbjct: 238  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297

Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
             FNGR CVVAFA+P T+KQMGASY NK           R P+ND  GRG   NY SGD
Sbjct: 298  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355



 Score =  225 bits (573), Expect = 8e-56
 Identities = 115/220 (52%), Positives = 132/220 (60%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 439  DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 498

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH GMW D++MG W GEEHG   RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 499  SGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558

Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
            EK++ SERDWS N                                     +D DS YDD+
Sbjct: 559  EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 618

Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            WD+G           A+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 619  WDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  320 bits (819), Expect = 2e-84
 Identities = 171/358 (47%), Positives = 211/358 (58%), Gaps = 8/358 (2%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+DY +E Y G QKMQY  GGAIPALA+EE++GE             G+G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 392  MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
             Q+ +   PS  VGN  +Q  K +VP   ++    Q  N   V+ EG Y      FP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 569  -----TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
                  + P  G G  P     SQ+G + E  H++   + G+QGS S P +   D  N  
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180

Query: 728  EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
             +V  EPAP++       +GA                 R+M +E  +RP +ENG TMLFV
Sbjct: 181  GRVANEPAPVLNPGAAGPQGA---LIPANQMGVNINVNRAMVNENQIRPPLENGGTMLFV 237

Query: 908  GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
            GELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH
Sbjct: 238  GELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 297

Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
             FNGR CVVAFA+P T+KQMGASY NK           R P+ND  GRG   NY SGD
Sbjct: 298  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSGD 355



 Score =  225 bits (574), Expect = 6e-56
 Identities = 115/220 (52%), Positives = 132/220 (60%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 439  DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 498

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH GMW D++MG W GEEHG   RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 499  SGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 558

Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
            EK++ SERDWS N                                     +D DS YDD+
Sbjct: 559  EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 618

Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            WD+G           A+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 619  WDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658


>gb|EPS60955.1| hypothetical protein M569_13847, partial [Genlisea aurea]
          Length = 508

 Score =  317 bits (811), Expect = 2e-83
 Identities = 182/354 (51%), Positives = 215/354 (60%), Gaps = 3/354 (0%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXX-GEGFL 388
            M+P+  EQ D+G+E Y G QKMQY+QGGAIPALA+EEMIGE              GE F+
Sbjct: 1    MEPMNGEQFDFGEEEYGGGQKMQYNQGGAIPALADEEMIGEEDDEYDDLYNDVNVGESFM 60

Query: 389  QMQRSDTQVPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            Q+QR D+Q+P     +     + N  GT  E +  +E N  K A    +   A  FP QK
Sbjct: 61   QVQRPDSQIPPFKAEN-----RVNPSGTGDESIPSEEANASKYAGNRAFGPGALQFPEQK 115

Query: 569  TSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEP 748
              L        T+D SQ  R      NSQ   SGYQGS + P+    DQ+ N +K +G+P
Sbjct: 116  AGLNTTEETSVTVDRSQTVR------NSQTDQSGYQGSVA-PNNKTEDQVKNMDKTVGDP 168

Query: 749  APLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWT 928
            + +       +KGA                 R +DDEY    S ENGNTML+VGELHWWT
Sbjct: 169  SSINPNVGVGSKGA--VPFNFMNMAANANAIRPVDDEYSNLGSSENGNTMLYVGELHWWT 226

Query: 929  TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRAC 1108
            TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEF+DP+AA ACKEGMNG+ FNGRAC
Sbjct: 227  TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFFDPAAAHACKEGMNGYVFNGRAC 286

Query: 1109 VVAFATPHTIKQMGASYTNKXXXXXXXXXXXRN-PVND-AAGRGNGANYPSGDA 1264
            VVAFATP TIKQMGASY N+           RN  +ND  AGRG G N+  GDA
Sbjct: 287  VVAFATPQTIKQMGASYMNRNQGQPQAQFPGRNAAMNDGGAGRGVGTNFSGGDA 340



 Score =  123 bits (308), Expect = 4e-25
 Identities = 61/96 (63%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGN-FSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXX 1660
            DLAFMGRGAGYG  F+GPAFPGMLPPFP VN++GLPGVAPHVNPAFF             
Sbjct: 413  DLAFMGRGAGYGGGFTGPAFPGMLPPFPAVNTLGLPGVAPHVNPAFFGRGMAPNGMGMMG 472

Query: 1661 XXXXXXPHSGMWNDTNM-GAWGGEEHGR--ESSYGG 1759
                  P+SG+WND ++ G WGGEE GR  ESSYGG
Sbjct: 473  PSGMGGPYSGLWNDASVGGGWGGEEQGRGPESSYGG 508


>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  316 bits (809), Expect = 3e-83
 Identities = 175/358 (48%), Positives = 214/358 (59%), Gaps = 7/358 (1%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+D+GDE Y G QKMQY   GAIPALA+EEM+GE             GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 392  MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            +QRS+    P  +G++G+Q  K   P    E    Q +N   V+ +G +    A +P Q 
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120

Query: 569  ----TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSE 730
                 S P  G G  P     SQ+GR+ E   ++Q  + G+QG +S  HK   D     +
Sbjct: 121  GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQ 180

Query: 731  KVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVG 910
            K+   PA  + +  G  +GAP                  M  E  VRP +ENG TMLFVG
Sbjct: 181  KIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVN----HPMISENQVRPPIENGPTMLFVG 236

Query: 911  ELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHS 1090
            ELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEFYDP++A+ACKEGM+G+ 
Sbjct: 237  ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYM 296

Query: 1091 FNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
            FNGRACVVAFA+P T+KQMGASY NK           R P ND  GRG   NY SGDA
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSGDA 353



 Score =  206 bits (525), Expect = 3e-50
 Identities = 111/220 (50%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG  YG F GP FPGMLP FP VN++GL GVAPHVNPAFF              
Sbjct: 435  DPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGG 494

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH GMW DT+MG WGG+EHG   RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 495  PGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 553

Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDH---DSGYDDD 2005
            EKE+ S+R+WS N                                    H   D  YDDD
Sbjct: 554  EKERVSDREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 613

Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
             D+GQ          A+PE+  RSRSRD DYGKRRRLPSE
Sbjct: 614  LDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  315 bits (807), Expect = 6e-83
 Identities = 170/351 (48%), Positives = 214/351 (60%), Gaps = 1/351 (0%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MDP+ +EQ+DY +E Y G QK+QY + GAIPALA+EE + E             GEGFLQ
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 392  MQRSDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            M R +  +P   VGN G+Q  K NVP   ++G A QEV N   + EG Y++     P QK
Sbjct: 61   MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSV----PEQK 116

Query: 569  TSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEP 748
               P    P     ASQ+GR+ E+ H++Q  + G+QG+A+M     AD  + + K+   P
Sbjct: 117  DQPPVSVVPEM---ASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGP 173

Query: 749  APLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWT 928
             P M  N G+                     R M +E  +RP VENG+  LFVGELHWWT
Sbjct: 174  IPSM--NSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWT 231

Query: 929  TDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRAC 1108
            TDAE+E VL Q+G++KEIKFFDERASGKSKGYCQV+FYDP+AASACKEGM+G+ FNGRAC
Sbjct: 232  TDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRAC 291

Query: 1109 VVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            VVAFA+  T+KQMG SY NK           R P+ND AGRG   N+  GD
Sbjct: 292  VVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGGD 342



 Score =  193 bits (491), Expect = 2e-46
 Identities = 106/221 (47%), Positives = 121/221 (54%), Gaps = 8/221 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG F GP FPGMLP FPGVN+MGL GVAPHVNPAFF              
Sbjct: 426  DPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMGS 485

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYG-YGEASHDKGARSSAAS 1831
                  H+ MWND +M  W GEE     RESSYGG+D  SEYG YGEA+H+K  RSSAA 
Sbjct: 486  SGMEGHHAPMWNDPSMAGWTGEEQDRRTRESSYGGDDGGSEYGNYGEANHEKPVRSSAAP 545

Query: 1832 REKEKNSERDW---SSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDD 2002
            RE+E+ SER+W   S                                    ++ D  Y+D
Sbjct: 546  RERERESEREWTGTSERRHRDEREQDWDRSEREHREPRYKEEKDSYRDHRRRERDVAYED 605

Query: 2003 DWDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            D D+G           A+PEDDHRSRSRD DYGKRRRLPSE
Sbjct: 606  DRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  310 bits (793), Expect = 2e-81
 Identities = 166/355 (46%), Positives = 207/355 (58%), Gaps = 8/355 (2%)
 Frame = +2

Query: 221  VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
            + +EQ+DY ++ Y G QKMQY  GGAIPALA+EE++GE             G+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 401  SDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK--- 568
             +   PS  VGN  +Q  K +VP   ++    Q  N   V+ EG Y    + FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120

Query: 569  --TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKV 736
               + P  G G  P     SQ+G + E  H++   + G+QGS S P +   D  N   +V
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180

Query: 737  IGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGEL 916
              EPAP++       +GA                 R M +E  +RP +ENG TMLFVGEL
Sbjct: 181  ANEPAPVLNPGAAGPQGA---LIPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237

Query: 917  HWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFN 1096
            HWWTTDAE+ESVL QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FN
Sbjct: 238  HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297

Query: 1097 GRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            GR CVVAFA+P T+KQMGASY NK             P+ND  GRG   NY SGD
Sbjct: 298  GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352



 Score =  229 bits (585), Expect = 3e-57
 Identities = 117/220 (53%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 436  DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 495

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH GMW D++MG W GEEHG   RESSYGG+D AS+YGYGEA+H+KGARS+AASR
Sbjct: 496  SGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANHEKGARSTAASR 555

Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
            EK++ SERDWS N                                     +D DS YDD+
Sbjct: 556  EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 615

Query: 2006 WDKGQ-XXXXXXXXGAVPEDDHRSRSRDADYGKRRRLPSE 2122
            WD+GQ         GA+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 616  WDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  308 bits (790), Expect = 5e-81
 Identities = 165/355 (46%), Positives = 206/355 (58%), Gaps = 8/355 (2%)
 Frame = +2

Query: 221  VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
            + +EQ+DY ++ Y G QKMQY  GGAIPALA+EE++GE             G+G LQ Q+
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 401  SDTQVPSV-VGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK--- 568
             +   PS  VGN  +Q  K +VP   ++    Q  N   V+ EG Y    + FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120

Query: 569  --TSLP--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKV 736
               + P  G G  P     SQ+G + E  H++   + G+QGS S P +   D  N   + 
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180

Query: 737  IGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGEL 916
              EPAP++       +GA                 R M +E  +RP +ENG TMLFVGEL
Sbjct: 181  ANEPAPVLNPGAAGPQGA---LIPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGEL 237

Query: 917  HWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFN 1096
            HWWTTDAE+ESVL QYG+ KEIKFFDERASGKSKGYCQVEF+D +AA+ACK+GMNGH FN
Sbjct: 238  HWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 297

Query: 1097 GRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            GR CVVAFA+P T+KQMGASY NK             P+ND  GRG   NY SGD
Sbjct: 298  GRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSGD 352



 Score =  229 bits (585), Expect = 3e-57
 Identities = 117/220 (53%), Positives = 133/220 (60%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG FSGP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 436  DPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRGMAANGMGMMGS 495

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH GMW D++MG W GEEHG   RESSYGG+D AS+YGYGEASH+KGARS+ ASR
Sbjct: 496  SGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEASHEKGARSTTASR 555

Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
            EK++ SERDWS N                                     +D DS YDD+
Sbjct: 556  EKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRRQRDRDSTYDDN 615

Query: 2006 WDKGQ-XXXXXXXXGAVPEDDHRSRSRDADYGKRRRLPSE 2122
            WD+GQ         GA+P++DHRSRSRD DYGKRRRLPSE
Sbjct: 616  WDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  306 bits (785), Expect = 2e-80
 Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+D+GDE Y G QKMQY   GAIPALA+EEM+GE             GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 392  MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            +QRS+  + P  +G++G++  +   P   +E    Q +N   V+ +G +   +A +P +K
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 569  TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
               P    P       P     SQ+G + E  H+ Q  + G+QG  S  +K   D     
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 728  EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
            +K+  +PA  + +  G  +G P                  + +E  V+P +ENG TMLFV
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235

Query: 908  GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
            GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236  GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295

Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
             FNGRACVVAFA+P T+KQMGASY NK           R P N+  GRG   NY SGDA
Sbjct: 296  MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353



 Score =  172 bits (437), Expect = 5e-40
 Identities = 83/133 (62%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 434  DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH+GMW D +MG WGG+EHG   RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494  SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552

Query: 1835 EKEKNSERDWSSN 1873
            EKE+ SER+WS N
Sbjct: 553  EKERVSEREWSGN 565


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  306 bits (785), Expect = 2e-80
 Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+D+GDE Y G QKMQY   GAIPALA+EEM+GE             GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 392  MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            +QRS+  + P  +G++G++  +   P   +E    Q +N   V+ +G +   +A +P +K
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 569  TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
               P    P       P     SQ+G + E  H+ Q  + G+QG  S  +K   D     
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 728  EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
            +K+  +PA  + +  G  +G P                  + +E  V+P +ENG TMLFV
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235

Query: 908  GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
            GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236  GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295

Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
             FNGRACVVAFA+P T+KQMGASY NK           R P N+  GRG   NY SGDA
Sbjct: 296  MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353



 Score =  196 bits (497), Expect = 5e-47
 Identities = 104/215 (48%), Positives = 120/215 (55%), Gaps = 7/215 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 434  DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH+GMW D +MG WGG+EHG   RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494  SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552

Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDH---DSGYDDD 2005
            EKE+ SER+WS N                                    H   D  YDDD
Sbjct: 553  EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612

Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRR 2107
            WD+GQ          A+PE++HRSRSRD  Y + +
Sbjct: 613  WDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  306 bits (785), Expect = 2e-80
 Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+D+GDE Y G QKMQY   GAIPALA+EEM+GE             GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 392  MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            +QRS+  + P  +G++G++  +   P   +E    Q +N   V+ +G +   +A +P +K
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 569  TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
               P    P       P     SQ+G + E  H+ Q  + G+QG  S  +K   D     
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 728  EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
            +K+  +PA  + +  G  +G P                  + +E  V+P +ENG TMLFV
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235

Query: 908  GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
            GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236  GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295

Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
             FNGRACVVAFA+P T+KQMGASY NK           R P N+  GRG   NY SGDA
Sbjct: 296  MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353



 Score =  172 bits (437), Expect = 5e-40
 Identities = 83/133 (62%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 434  DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH+GMW D +MG WGG+EHG   RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494  SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552

Query: 1835 EKEKNSERDWSSN 1873
            EKE+ SER+WS N
Sbjct: 553  EKERVSEREWSGN 565


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  306 bits (785), Expect = 2e-80
 Identities = 165/359 (45%), Positives = 214/359 (59%), Gaps = 8/359 (2%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MD + +EQ+D+GDE Y G QKMQY   GAIPALA+EEM+GE             GEGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 392  MQRSDTQV-PSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQK 568
            +QRS+  + P  +G++G++  +   P   +E    Q +N   V+ +G +   +A +P +K
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 569  TSLPGPGGP-------PQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNS 727
               P    P       P     SQ+G + E  H+ Q  + G+QG  S  +K   D     
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 728  EKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFV 907
            +K+  +PA  + +  G  +G P                  + +E  V+P +ENG TMLFV
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVN----HPVMNENQVQPPIENGPTMLFV 235

Query: 908  GELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGH 1087
            GELHWWTTDAE+ESVL QYG++KEIKFFDE+ASGKSKGYCQVEFYDPS+A+ CKEGMNG+
Sbjct: 236  GELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGY 295

Query: 1088 SFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
             FNGRACVVAFA+P T+KQMGASY NK           R P N+  GRG   NY SGDA
Sbjct: 296  MFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSGDA 353



 Score =  214 bits (546), Expect = 1e-52
 Identities = 113/220 (51%), Positives = 128/220 (58%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +M RG GYG F GP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 434  DPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGA 493

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                 PH+GMW D +MG WGG+EHG   RESSYGGED ASEYGYG+A+H+KG RSS ASR
Sbjct: 494  SGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG-RSSGASR 552

Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDH---DSGYDDD 2005
            EKE+ SER+WS N                                    H   D  YDDD
Sbjct: 553  EKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDD 612

Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            WD+GQ          A+PE++HRSRSRD DYGK+RRLPSE
Sbjct: 613  WDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  303 bits (777), Expect = 2e-79
 Identities = 174/351 (49%), Positives = 208/351 (59%), Gaps = 3/351 (0%)
 Frame = +2

Query: 221  VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
            + DEQ+DY DE Y G QK+QY   GAIPALAEEEM GE             GE FLQM R
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59

Query: 401  SDTQ-VPSVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSL 577
            S+    P  VGN G Q   +N     +E    Q +N   VA E  Y+ T   FP Q    
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSN--DLRVESGGSQGLNIPGVAVESKYS-TGTHFPEQNVKG 116

Query: 578  P--GPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPA 751
            P  G  G P     +Q+ R+ E+ ++SQA + G+QGS S P     D  + + K+  +P 
Sbjct: 117  PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPT 176

Query: 752  PLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTT 931
            P+   N G  +  P                RS  +E  +RP +ENG+TML+VGELHWWTT
Sbjct: 177  PV--PNAGVPRVIPQLPASQMNMNMDTN--RSATNENQIRPPLENGSTMLYVGELHWWTT 232

Query: 932  DAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACV 1111
            DAE+E+VL QYG VKEIKFFDERASGKSKGYCQVEFYD +AA+ACKEGMNGH FNGRACV
Sbjct: 233  DAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACV 292

Query: 1112 VAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGDA 1264
            VAFA+  T+KQMGASY NK           R P+ND AGRG   NY  GDA
Sbjct: 293  VAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDA 343



 Score =  224 bits (572), Expect = 1e-55
 Identities = 117/219 (53%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRGAGYG F+GP FPGMLP FP VN+MGL GVAPHVNPAFF              
Sbjct: 426  DPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGP 485

Query: 1664 XXXXXPHSGMWNDTNMGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASRE 1837
                 P++GMW+DT+MG WG E     RESSYGG+D ASEYGYGE +H+KGARSSAASRE
Sbjct: 486  SGMDGPNAGMWSDTSMGGWGEEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAASRE 545

Query: 1838 KEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDW 2008
            KE+ SERDWS N                                     ++ DSGY+DDW
Sbjct: 546  KERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYEDDW 605

Query: 2009 DKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            D+GQ          AVPE+D+RSRSRDADYGKRRRLPSE
Sbjct: 606  DRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  301 bits (771), Expect = 8e-79
 Identities = 170/361 (47%), Positives = 210/361 (58%), Gaps = 13/361 (3%)
 Frame = +2

Query: 221  VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
            + +EQLDY DE Y G QKM +  GGAI ALA++E++GE             GEGFLQM R
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 401  SDTQVPS-VVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYA------------A 541
            S+   PS V+     Q  K +VP   LE    Q +    V+ EG Y+            A
Sbjct: 61   SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMA 120

Query: 542  TAAPFPVQKTSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMN 721
               P     + L GP         SQ+GR+ E+ H++Q  + G+QGS  +P K  A+  +
Sbjct: 121  VKGPEMGSTSHLDGPS-------VSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSD 173

Query: 722  NSEKVIGEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTML 901
               K+  E  P++ +  G  +  P                R M +E  +RP+V+NG TML
Sbjct: 174  VHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVN--RPMVNENQIRPAVDNGATML 231

Query: 902  FVGELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMN 1081
            FVGELHWWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVEFYD SAA+ACKEGMN
Sbjct: 232  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMN 291

Query: 1082 GHSFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            G+ FNGRACVVAFA+P T+KQMGASY NK           R P+ND  GRG G N   GD
Sbjct: 292  GYIFNGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQGRRPMNDGVGRGGGMNMQGGD 349

Query: 1262 A 1264
            A
Sbjct: 350  A 350



 Score =  214 bits (546), Expect = 1e-52
 Identities = 109/217 (50%), Positives = 126/217 (58%), Gaps = 4/217 (1%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG  YG FSG AFPGM+P FP VN+MGL GVAPHVNPAFF              
Sbjct: 431  DPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGA 490

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                  H+GMW DT+MG WGGEEHG   RESSYGG+D AS+YGYGE +H+K  RS+ ASR
Sbjct: 491  TGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASR 550

Query: 1835 EKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWDK 2014
            EKE+ SERDWS N                                  ++ D   +DDWD+
Sbjct: 551  EKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDR 610

Query: 2015 GQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            GQ          AV ++DHRSRSRD DYGKRRRLPSE
Sbjct: 611  GQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
            gi|462422613|gb|EMJ26876.1| hypothetical protein
            PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  289 bits (740), Expect = 3e-75
 Identities = 164/348 (47%), Positives = 202/348 (58%), Gaps = 1/348 (0%)
 Frame = +2

Query: 221  VTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQR 400
            + +EQ+DY DE Y G QK+QY   GAI ALA+EE + E              EGFLQM R
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 401  SDTQVP-SVVGNSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSL 577
            S+  +P   VGN G+Q  K +V  T ++    QE     V+ +G Y++  A FP Q+   
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ--- 117

Query: 578  PGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPAPL 757
               G PP             VA   + G +GY GS +MP     D  + + K   E  P 
Sbjct: 118  ---GQPP-------------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPS 160

Query: 758  MYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTTDA 937
            M  N G                      R M +E  +RP VENG+TMLFVGELHWWTTDA
Sbjct: 161  M--NSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDA 218

Query: 938  EIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVA 1117
            E+ESVL QYG+VKEIKFFDERASGKSKGYCQVEF+DP+AA+ACKEGM+G+ FNGRACVVA
Sbjct: 219  ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVA 278

Query: 1118 FATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            FA+P T+KQMGASY +K           R P+N+  GRG G NY +GD
Sbjct: 279  FASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGD 326



 Score =  224 bits (571), Expect = 1e-55
 Identities = 115/221 (52%), Positives = 131/221 (59%), Gaps = 8/221 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG F GPAFPGML  FP VN+MGL GVAPHVNPAFF              
Sbjct: 410  DPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGS 469

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                  H+GMWND +MG WGG+EHG   RESSYGG+D ASEYGYGEA+H+KG RS+A SR
Sbjct: 470  SGMDGHHAGMWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAPSR 529

Query: 1835 EKEKNSERDWSSNP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDD 2002
            E+E+ SERDWS N                                      ++ D GY+D
Sbjct: 530  ERERGSERDWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYED 589

Query: 2003 DWDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            DWD+GQ          A+PEDDHRSRSRD DYGKRRRLPSE
Sbjct: 590  DWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  281 bits (720), Expect = 7e-73
 Identities = 159/354 (44%), Positives = 207/354 (58%), Gaps = 7/354 (1%)
 Frame = +2

Query: 221  VTDEQLDYGDEGYAGNQKMQYH-QGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQ 397
            + ++ +D+ DE Y G QK QY   GGAI ALA+EE++G+             GEGFLQ+Q
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 398  RSDT-QVPSVVG-NSGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKT 571
            RS+   +P+  G  +G+Q  K N P    E    Q+ N   V+ EG +++  + FP Q+ 
Sbjct: 61   RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD 120

Query: 572  SLPGPGGPPQTMDASQRGRL--PEVAHNSQAGH--SGYQGSASMPHKNAADQMNNSEKVI 739
             L       +    S+ G +  P+ A  SQ G   +G+QGS  M H    D  +   K++
Sbjct: 121  GL-------KVDKKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMV 173

Query: 740  GEPAPLMYTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELH 919
             EP  +   N G                        + +E  +RPS+ENG+TMLFVGELH
Sbjct: 174  NEP--IQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGELH 231

Query: 920  WWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNG 1099
            WWTTDAE+ESVL QYG+VKEIKFFDERASGKSKGYCQVE+YD +AA ACKEGM+GH FNG
Sbjct: 232  WWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNG 291

Query: 1100 RACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            RACVVAFA+P T+KQMGA+Y +K           R P+ND  GRG   N+ SGD
Sbjct: 292  RACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSGD 345



 Score =  192 bits (488), Expect = 6e-46
 Identities = 103/220 (46%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG F+GPAFPGMLP FP VN+MG   VAPHVNPAFF              
Sbjct: 425  DPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAVAPHVNPAFFGRGMTNNGMGMVGS 484

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAASR 1834
                    GMWND ++G WGGEEHG   RESSYGG+D ASEYGYG+ +H+KG R      
Sbjct: 485  SLMDGHQGGMWNDPSIGGWGGEEHGRRTRESSYGGDDGASEYGYGDTNHEKGGR------ 538

Query: 1835 EKEKNSERDWSSNP---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDD 2005
              E+ SERDWS N                                     K+ +  Y+DD
Sbjct: 539  --ERGSERDWSGNSERRNHEERDQDWDRSQKEQKEHRYREGKDGSRDYRPKERELDYEDD 596

Query: 2006 WDKGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            WD+GQ           V ED HRSRSRD DYGKRRRLPSE
Sbjct: 597  WDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  277 bits (708), Expect = 2e-71
 Identities = 158/340 (46%), Positives = 191/340 (56%), Gaps = 5/340 (1%)
 Frame = +2

Query: 257  YAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQRSDTQVP-SVVGN 433
            Y   +KMQY   GAIPALAEEEM GE             GE FLQM  S+   P + VGN
Sbjct: 3    YEEEEKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGN 61

Query: 434  SGIQNSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPG----GPPQ 601
             G Q   A+       G     +     A EG Y+   A FP QK           GP  
Sbjct: 62   GGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPVD 121

Query: 602  TMDASQRGRLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPAPLMYTNMGNT 781
                +Q+GR+ E++H+ Q  + G+Q S  +P     D  + S K   EP PL  T     
Sbjct: 122  GSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGP 181

Query: 782  KGAPXXXXXXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAEIESVLIQ 961
            +GAP                R + +E  VRP +ENG+T L+VGELHWWTTDAE+ES   Q
Sbjct: 182  RGAPQMQVNQMHMSADVN--RPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQ 239

Query: 962  YGKVKEIKFFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPHTIK 1141
            +G+VKEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGMNGH FNGR CVVAFA+P T+K
Sbjct: 240  FGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLK 299

Query: 1142 QMGASYTNKXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            QMGASY NK           R  +ND AGRG  AN+ SGD
Sbjct: 300  QMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGD 339



 Score =  189 bits (479), Expect = 6e-45
 Identities = 101/214 (47%), Positives = 116/214 (54%), Gaps = 1/214 (0%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG F+GP FPGMLP FP VNSMGL GVAPHVNPAFF              
Sbjct: 421  DPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMVS 480

Query: 1664 XXXXXPHSGMWNDTNMGAWGGEEHGRESSYGGEDNASEYGYGEASHDKGARSSAASREKE 1843
                 P+ GMW               ESSY G++ ASEYGYGE +H+KGARSS ASREKE
Sbjct: 481  SGMDGPNPGMW---------------ESSYDGDEGASEYGYGEGNHEKGARSSGASREKE 525

Query: 1844 KNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWDKGQX 2023
            + SERDWS N                                  ++ DSGY+DD D+G  
Sbjct: 526  RGSERDWSGNSDRRHRDEREQDWDRPEREHRYKEEKDSYRGHRQRERDSGYEDDRDRGHS 585

Query: 2024 XXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
                     A PE+D+RSR+RD DYGKRRRLPSE
Sbjct: 586  SSRARSRSRAAPEEDYRSRTRDVDYGKRRRLPSE 619


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
            gi|550329195|gb|ERP56065.1| hypothetical protein
            POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  237 bits (605), Expect = 2e-59
 Identities = 143/332 (43%), Positives = 170/332 (51%), Gaps = 1/332 (0%)
 Frame = +2

Query: 269  QKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQMQRSDTQVP-SVVGNSGIQ 445
            +KMQY   GAIPALAEEE+ GE             GE FLQM  S+   P +  GN G Q
Sbjct: 7    EKMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATAGNGGFQ 65

Query: 446  NSKANVPGTHLEGVALQEVNNVKVAEEGNYAATAAPFPVQKTSLPGPGGPPQTMDASQRG 625
               A+       G  +   +   VA EG Y+   A FP QK +  G              
Sbjct: 66   TRNAHESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGIG-------------- 111

Query: 626  RLPEVAHNSQAGHSGYQGSASMPHKNAADQMNNSEKVIGEPAPLMYTNMGNTKGAPXXXX 805
                    +  G  GY   +S+  K +A              P M  N  N         
Sbjct: 112  -----VEANDVGSIGYGDGSSVAQKGSAGPRG---------VPQMQVNQMNMNA------ 151

Query: 806  XXXXXXXXXXXXRSMDDEYMVRPSVENGNTMLFVGELHWWTTDAEIESVLIQYGKVKEIK 985
                        R + +E  VRP +ENG T L+VGELHWWTTDAE+ESV  QYG+VKEIK
Sbjct: 152  ---------DVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIK 202

Query: 986  FFDERASGKSKGYCQVEFYDPSAASACKEGMNGHSFNGRACVVAFATPHTIKQMGASYTN 1165
            FFDERASGKSKGYCQV+FY+ +AA+ACKEGMN H FNGR CVVAFA+  T+KQMGASY +
Sbjct: 203  FFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMS 262

Query: 1166 KXXXXXXXXXXXRNPVNDAAGRGNGANYPSGD 1261
            K           R  +ND  GRG  ANY SGD
Sbjct: 263  KTQGQPQPQSQGRGSMNDGMGRGGNANYQSGD 294



 Score =  201 bits (512), Expect = 9e-49
 Identities = 107/216 (49%), Positives = 121/216 (56%), Gaps = 3/216 (1%)
 Frame = +2

Query: 1484 DLAFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXX 1663
            D  +MGRG GYG F G  FPGMLP FP VNSMGL GVAPHVNPAFF              
Sbjct: 376  DPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMAS 435

Query: 1664 XXXXXPHSGMWNDTNMGAWGGE--EHGRESSYGGEDNASEYGYGEASHDKGARSSAASRE 1837
                 P+ G W DT+MG WG E     RESSY G++ ASEYGYGE +H+KGARSS ASRE
Sbjct: 436  SGMEGPNPGKWPDTSMGGWGEEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGASRE 495

Query: 1838 KEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWDKG 2017
            KE+ SERDWS N                                  ++ DSGY+DD D+G
Sbjct: 496  KERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRG 555

Query: 2018 QXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
                       A PE+D+RSRSRD DYGKRRR PSE
Sbjct: 556  HSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRPPSE 591


>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
            gi|548855834|gb|ERN13697.1| hypothetical protein
            AMTR_s00049p00146760 [Amborella trichopoda]
          Length = 659

 Score =  237 bits (605), Expect = 2e-59
 Identities = 148/372 (39%), Positives = 191/372 (51%), Gaps = 22/372 (5%)
 Frame = +2

Query: 212  MDPVTDEQLDYGDEGYAGNQKMQYHQGGAIPALAEEEMIGEXXXXXXXXXXXXXGEGFLQ 391
            MDP+ +EQLDY DE Y  NQKM +  GGAI ALA+EE++GE             G+GF+Q
Sbjct: 1    MDPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQ 60

Query: 392  MQRSDTQVPSVVGNSGIQNSKA---NVPGTHLEGVALQE-------------VNNVKVAE 523
              +    V      +G+Q  K    + P  ++ GV  +E             ++  K  +
Sbjct: 61   SLQHQEPVQYESMGNGVQAPKEEPISTPPVNIPGVGHEEKGEKDAKLSGFSDLDQKKAFQ 120

Query: 524  EGNYAATAAPFPVQKTSLPGPGGPPQTMDASQRGRLPEVAHNSQAGHSGYQGSASMP-HK 700
            E      A      K  +  P   PQ   +  R      A    A  SG+  + +M  +K
Sbjct: 121  EQASNQLAGASSGLKIRVSEPVSEPQPQASGFRN-----APAPPAKGSGFNTAGAMDANK 175

Query: 701  NAADQMNNSEKVIGE-PAPLM----YTNMGNTKGAPXXXXXXXXXXXXXXXXRSMDDEYM 865
              A   +N+   +G  P P +      NM    G                   S +   +
Sbjct: 176  QLAQTSSNAVPRVGPGPGPGIGAGPNANMNRMMGPGPNQAGAVIDTSARFG--SENSNRL 233

Query: 866  VRPSVENGNTMLFVGELHWWTTDAEIESVLIQYGKVKEIKFFDERASGKSKGYCQVEFYD 1045
                 E+GNTMLFVGEL WWTTDAE+ESVL QYG+VK++KFFDERASGKSKGYCQVEFYD
Sbjct: 234  SHGGGESGNTMLFVGELQWWTTDAELESVLSQYGRVKDLKFFDERASGKSKGYCQVEFYD 293

Query: 1046 PSAASACKEGMNGHSFNGRACVVAFATPHTIKQMGASYTNKXXXXXXXXXXXRNPVNDAA 1225
            P+AA+ACKE MNGH FNGRACVVAFA+ HT+KQ+  +Y NK           R P+ND  
Sbjct: 294  PAAAAACKESMNGHVFNGRACVVAFASQHTLKQLTTNYLNKTQAQAQAQSQGRRPMNDGG 353

Query: 1226 GRGNGANYPSGD 1261
            GR  G +Y  GD
Sbjct: 354  GRAGGPSYQGGD 365



 Score =  175 bits (443), Expect = 9e-41
 Identities = 95/218 (43%), Positives = 118/218 (54%), Gaps = 7/218 (3%)
 Frame = +2

Query: 1490 AFMGRGAGYGNFSGPAFPGMLPPFPGVNSMGLPGVAPHVNPAFFXXXXXXXXXXXXXXXX 1669
            A +GRG+GYG FSGP FPGMLP F  + ++GLPGVAPHVNPAFF                
Sbjct: 446  AHLGRGSGYGGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGA 505

Query: 1670 XXXPHSGMWNDTNMG---AWGGEEHG---RESSYGGEDNASEYGYGEASHDKGARSSAAS 1831
                H GMW D++MG    WG EEHG   RESSY G+D AS+YGYG+  H++G   S   
Sbjct: 506  MDGHHGGMWGDSSMGGGVGWGNEEHGRRTRESSY-GDDGASDYGYGDGGHERGGGRSNPG 564

Query: 1832 REKEKNSERDWSSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHDSGYDDDWD 2011
            REK++ SERDWSS P                                 ++ D   +DDWD
Sbjct: 565  REKDRGSERDWSSGP---ERRHRDDRDSDWDRDPRYKDEKDGYSDHRQRERDWDNEDDWD 621

Query: 2012 KGQXXXXXXXXG-AVPEDDHRSRSRDADYGKRRRLPSE 2122
            +G+           + E+D RSRS+D DYGKRRR+PSE
Sbjct: 622  RGRTSSRSRSKSRMMQEEDQRSRSKDVDYGKRRRVPSE 659


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