BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00003994
         (2173 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30728.1| hypothetical protein MIMGU_mgv1a003873mg [Mimulus...   672   0.0  
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   659   0.0  
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   656   0.0  
ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prun...   654   0.0  
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              644   0.0  
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   637   e-180
ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutr...   625   e-176
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   620   e-175
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   619   e-174
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   611   e-172
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   596   e-167
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   592   e-166
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   592   e-166
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   591   e-166
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             585   e-164
ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing pr...   580   e-163
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   579   e-162
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   564   e-158
ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A...   541   e-151
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   530   e-148

>gb|EYU30728.1| hypothetical protein MIMGU_mgv1a003873mg [Mimulus guttatus]
          Length = 558

 Score =  672 bits (1734), Expect = 0.0
 Identities = 343/557 (61%), Positives = 423/557 (75%), Gaps = 20/557 (3%)
 Frame = -2

Query: 1629 MPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKRKLPEFDSFK 1450
            MP APF+YQYSYTETPKVKPVKLREPL+SPFGP TMAKPWLGR+PL PSKRKLPEFDSF+
Sbjct: 1    MPEAPFVYQYSYTETPKVKPVKLREPLMSPFGPVTMAKPWLGRRPLPPSKRKLPEFDSFQ 60

Query: 1449 LPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSRKCSRQLNMG 1270
            LPPPHKKGVKPVQAPGP+LPGSGPKYV+SR+EILG+PL+KEEI+ LI+GS+K +RQLNMG
Sbjct: 61   LPPPHKKGVKPVQAPGPFLPGSGPKYVKSREEILGDPLSKEEIKELIDGSKKSNRQLNMG 120

Query: 1269 RDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIYCRGGVIYLF 1090
            RDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDM+NVC+QLE+KTGGKIIY RGGVIYLF
Sbjct: 121  RDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMENVCQQLEDKTGGKIIYNRGGVIYLF 180

Query: 1089 RGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDLTPICKLAKN 910
            RGRNYN++SRPR+PLMLWKP +PVYPRLV+RVP+GLTLEEAS MRKKGRDLTPICKLAKN
Sbjct: 181  RGRNYNYKSRPRFPLMLWKPISPVYPRLVRRVPEGLTLEEASAMRKKGRDLTPICKLAKN 240

Query: 909  GVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFEREHILIWRG 730
            GVY DLV NVREAFEACELVRI+CQGLNPSD++KIGAKLK LVPCVLISFE EHIL+WRG
Sbjct: 241  GVYSDLVENVREAFEACELVRINCQGLNPSDHKKIGAKLKALVPCVLISFEYEHILVWRG 300

Query: 729  PHWKSSIEPAKILKPLEEVKTDVAPTSILNSEKHDDNDDGDVLEKTISPTSSN------- 571
              WKS+++    LK  ++V+     TS+L +E   ++ + DV E    P SS+       
Sbjct: 301  RDWKSTLDLNGGLKGSKKVEPAPGVTSLLVTEATSNDVEDDVDESEKFPVSSSDQTVVEP 360

Query: 570  ------EPDISVIDDPXXXXXXXXXXXXXXXXXXEIEL-NDTVKNTEAVTKSSSVDLGPS 412
                  E +++V++                     +E  +D     +    ++S      
Sbjct: 361  KSDQTVENELTVLEGLEEPKSDQTVENDLTVLEGLVESQSDPTVENDLQNLAASQTRPEK 420

Query: 411  LDFSCTEGVMLLRKRAVEKGMAVVLDHDS--LDADIVFKEAVAFAKTAPMGPRYPHRSKQ 238
             +   T+ ++LLRK+AVE GMA+V D  S  LD+D VFK AVAFAKTAP+GP +  R K+
Sbjct: 421  KNTESTQAILLLRKQAVENGMALVFDEHSVLLDSDAVFKTAVAFAKTAPVGPVFSKRPKK 480

Query: 237  LAAEKDEQRRESDESR-VKEATVDKTPSQL---MVASRRRDDGRKNSTSRKMEDIKADYL 70
               E ++ ++++++ R   +  + K  S L   +  S+  D+ + +S + K++DI+ DYL
Sbjct: 481  AVEEVEKSKKKNNKGRECNDLVLSKGASALGTGIYVSKGMDERKNSSRNEKLKDIRGDYL 540

Query: 69   NIVPQGNLRVDELAKLL 19
            N+VPQGNL +DELA+LL
Sbjct: 541  NVVPQGNLGIDELARLL 557


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  659 bits (1700), Expect = 0.0
 Identities = 320/440 (72%), Positives = 365/440 (82%), Gaps = 10/440 (2%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLT--- 1828
            RPATE+RFSRWNNANA+KF+R ER+QKEIED+ R  KRFDS  +IA+NYNPAPP      
Sbjct: 22   RPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLSIANNYNPAPPSPVAEK 81

Query: 1827 TFKXXXXXXXXXXXXXXXXXXXXSRNPSS-----HPAFKPLVKPRHIPIKGDESTPHKPE 1663
            TFK                    SRN  +     HPAFKPLV+ R IP++  + T  K +
Sbjct: 82   TFKSTGTPSTPSSPSIPGKKSKYSRNFHNNPRQIHPAFKPLVRTRKIPVETPDETAGKSD 141

Query: 1662 F--KIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLN 1489
               K+DENG+ YE P APF+YQYSYTETPKVKP KLREPLVSPFGPE+M +PW GRKPL 
Sbjct: 142  IDIKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREPLVSPFGPESMQRPWTGRKPLP 201

Query: 1488 PSKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALI 1309
            PSK+KLPEFDSF+LPPPHKKGVKPVQAPGP+L GSGPKYV+SR+E+LGEPLTKEE+  LI
Sbjct: 202  PSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMMELI 261

Query: 1308 EGSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGG 1129
               +K +RQ+N+GRDGLTHNML+NIHA WKR+RVCKIKCKGVCTVDMDNVCE+LEEKTGG
Sbjct: 262  NSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGG 321

Query: 1128 KIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKK 949
            KIIY +GGVIYLFRGRNYN+ +RPR+PLMLW+P TPVYPRLV+RVP+GLTLEEA+ MRKK
Sbjct: 322  KIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVRRVPEGLTLEEATEMRKK 381

Query: 948  GRDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVL 769
            GR+L PICKLAKNGVY DLV+NVREAFEACELV I+CQGLNPSDYRKIGAKLKDLVPCVL
Sbjct: 382  GRNLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPSDYRKIGAKLKDLVPCVL 441

Query: 768  ISFEREHILIWRGPHWKSSI 709
            ISFE+EHILIWRG  W SS+
Sbjct: 442  ISFEQEHILIWRGRDWVSSL 461



 Score = 98.2 bits (243), Expect = 1e-17
 Identities = 51/129 (39%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
 Frame = -2

Query: 399  CTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSKQLAAEKD 220
            CTEG++LL K+A+E G AVVL+  S+DADIV++ AVA + + P GP + H+ K+++ ++ 
Sbjct: 638  CTEGILLLWKQAIESGSAVVLNDSSIDADIVYQRAVALSTSVPPGPVFQHQPKKVSVQRR 697

Query: 219  EQRRESD-ESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADYLNIVPQGNLR 43
             +    D E    +     +  +  V S R+ +   ++   K + I+ DYLN+VP+G+L 
Sbjct: 698  GEEEIGDLEVGCTKLDTPASSRKETVVSSRKVNSTTSTRKEKKKGIRKDYLNVVPKGSLG 757

Query: 42   VDELAKLLS 16
            VDELAKLL+
Sbjct: 758  VDELAKLLA 766


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  656 bits (1693), Expect = 0.0
 Identities = 317/440 (72%), Positives = 364/440 (82%), Gaps = 10/440 (2%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTT-- 1825
            RPATE+RFSRWNNANA+KF+R ER+QKEIED+ R  KRFDS   IA+NYNPAPP   T  
Sbjct: 22   RPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLNIANNYNPAPPSPVTEK 81

Query: 1824 -FKXXXXXXXXXXXXXXXXXXXXSRNPSS-----HPAFKPLVKPRHIPIKGDESTPHKP- 1666
             FK                    SRN  +     HPAFKPLV+ R IP +  + T  K  
Sbjct: 82   TFKSVGTPSTPSSPSIPGKKSKYSRNFQNNPRQIHPAFKPLVRTRKIPDETADETARKSA 141

Query: 1665 -EFKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLN 1489
             + K+DENG+ YE P APF+YQYSYTETPK+KP KLREPLVSPFGPE+M +PW GRKPL 
Sbjct: 142  IDIKVDENGVCYEFPEAPFVYQYSYTETPKLKPKKLREPLVSPFGPESMQRPWTGRKPLP 201

Query: 1488 PSKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALI 1309
            PSK+K PEFDSF+LPPPHKKGVKPVQAPGP+L GSGPKYV+SR+E+LGEPLTKEE+  LI
Sbjct: 202  PSKKKRPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMMELI 261

Query: 1308 EGSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGG 1129
               +K +RQ+N+GRDGLTHNML+NIHA WKR+RVCKIKCKGVCTVDMDNVCE+LEEKTGG
Sbjct: 262  NSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKTGG 321

Query: 1128 KIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKK 949
            KIIY +GG+IYLFRGRNYN+++RPR+PLMLW+P TPVYPRLVQRVP+GLTLEEA++MRKK
Sbjct: 322  KIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQRVPEGLTLEEATLMRKK 381

Query: 948  GRDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVL 769
            GR+L PICKLAKNGVY DLV+NVREAFEACELV I+CQGLNPSDYRKIGAKLKDLVPCVL
Sbjct: 382  GRNLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAKLKDLVPCVL 441

Query: 768  ISFEREHILIWRGPHWKSSI 709
            ISFE+EHIL+WRG  W SS+
Sbjct: 442  ISFEQEHILMWRGRDWVSSL 461



 Score =  101 bits (252), Expect = 1e-18
 Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
 Frame = -2

Query: 399  CTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSKQLAAEKD 220
            CTEG++LL K+A+E G AV+LD  S+DADIV++ AVA + +AP GP + H+ K+++    
Sbjct: 636  CTEGILLLWKQAIESGSAVLLDDSSIDADIVYQRAVALSTSAPAGPVFQHQPKKVSV--- 692

Query: 219  EQRRESDESRVKEATVDKTPSQLMVASRRRDDGRK-NSTS----RKMEDIKADYLNIVPQ 55
             QRR  +E    E    K  +           GRK NST+     K++ I+ DYLN+VP+
Sbjct: 693  -QRRGEEEIGDLEVGCTKLDTPASSRKETAVSGRKVNSTTSTRKEKLKGIREDYLNVVPK 751

Query: 54   GNLRVDELAKLLS 16
            G+L VDELAKLL+
Sbjct: 752  GSLGVDELAKLLA 764


>ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
            gi|462399316|gb|EMJ04984.1| hypothetical protein
            PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  654 bits (1688), Expect = 0.0
 Identities = 373/732 (50%), Positives = 458/732 (62%), Gaps = 71/732 (9%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTT-- 1825
            RP TEVRF+RWNNANA+KF  R R+Q+EIED  R E+RFDSA  IA  Y+ A    TT  
Sbjct: 28   RPPTEVRFARWNNANAEKFNERRRAQQEIEDDIRRERRFDSATRIATIYDSATDTTTTSE 87

Query: 1824 -FKXXXXXXXXXXXXXXXXXXXXSRNPS---SHPAFKPLVKPRH---IPIKGDESTPHKP 1666
             FK                    S+NP+   SHPAF+ +++P     IP     +   K 
Sbjct: 88   TFKSVGTPSFPSSPSIPGKKSKYSKNPNPKESHPAFRRIIRPTKLSKIPKDKGPTVDRKA 147

Query: 1665 EFKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNP 1486
               + ++G+SY +  APF ++YSYTETPKVKP+KLREP  +PFGP TMA+PW GR PL P
Sbjct: 148  NISVGDDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPLPP 207

Query: 1485 SKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIE 1306
            SK+KL EFDSF+LPPPHKKGVKPVQ+PGPYLPGSGPKYV+SRDEILG+PLT EE++ L++
Sbjct: 208  SKKKLKEFDSFQLPPPHKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKELVK 267

Query: 1305 GSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGK 1126
            G  K  RQLNMGRDG THNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVCEQ+EEKTGGK
Sbjct: 268  GCIKTRRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGK 327

Query: 1125 IIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKG 946
            IIY +GGVIYLFRGRNYN+++RP++PLMLW+P TPVYPRLVQR P+GLTLEEA+ MRKKG
Sbjct: 328  IIYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRKKG 387

Query: 945  RDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLI 766
            R+L PICKL KNGVY +L +N REAFE CELVRI+C G+N SDYRKIGAKLKDLVPCVLI
Sbjct: 388  RNLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLI 447

Query: 765  SFEREHILIWRG-------PHWKSSIEPAK---------ILKPLE--EVKTDVAPT---- 652
            SFE EHIL+WRG       P+ ++ ++  K         I  PLE  E  T  A T    
Sbjct: 448  SFELEHILMWRGREWKSSIPYPENDLKEVKGSDVDDSTSIAPPLEGQEESTSCASTVSVK 507

Query: 651  ----SILN-------SEKHDDNDDGDV----------------------LEKTISPTSSN 571
                 ILN       SE     + GD+                      + +TIS    +
Sbjct: 508  DASLEILNTSTPSIGSEVVGAEESGDLSPSQYVEPCATVDGVSAVGGTHVTETISDVEDD 567

Query: 570  EPDISVIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKNTE----AVTKSSSVDLGPSLDF 403
            E     I DP                     +    ++ E    A   S ++        
Sbjct: 568  ES--KAILDPSGIDRILDNTGCAADEASPTTVTGGPRSNENPQCASVSSENLSEPARSSG 625

Query: 402  SCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYP-HRSKQLAAE 226
             C E V+LL   AV  G A++LD  +LDADI+F+ AVA A++AP GP +  HR K++A +
Sbjct: 626  PCMENVLLLLNEAVGSGSALILDDSALDADIIFQRAVALAQSAPPGPVFKHHRPKKVAVQ 685

Query: 225  K--DEQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADYLNIVPQG 52
            K     ++E+  S VKE TV        V         K++  ++  D      N+VPQG
Sbjct: 686  KRIKIMKQEASVSEVKEITVP-------VKRGSEKIQMKDTKVKRTRDFGESLDNVVPQG 738

Query: 51   NLRVDELAKLLS 16
            +LRVDELAKLL+
Sbjct: 739  SLRVDELAKLLA 750


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  644 bits (1662), Expect = 0.0
 Identities = 367/721 (50%), Positives = 448/721 (62%), Gaps = 60/721 (8%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAH----NYNPAPPHL 1831
            RPA+EVRFSRWNNANA++F  RER+QKEIED  R E+RFDSA  IA       +      
Sbjct: 20   RPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAAAA 79

Query: 1830 TTFKXXXXXXXXXXXXXXXXXXXXSRNP-SSHPAFKPLVKPRHIPIKGDESTPH-KPEFK 1657
             TFK                    S+N  +SHPAF+ + +   +P  G   +P  K    
Sbjct: 80   GTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLP--GPNISPEAKRGIS 137

Query: 1656 IDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKR 1477
            I E+G+SY +P  PF  +YSYTETPKVKP+ LREP   PFGP+TM +PW GR PL PSK+
Sbjct: 138  IGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPSKK 197

Query: 1476 KLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSR 1297
            KL EFDSF+LPPP KK VKPVQAPGP+LPGSGP+YVRSR+EILGEPLT+EEI+ L++G  
Sbjct: 198  KLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQGCV 257

Query: 1296 KCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIY 1117
            K  RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV +QLEEKTGGK+IY
Sbjct: 258  KSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIY 317

Query: 1116 CRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDL 937
             +GGV++LFRGRNYN+R+RPR+PLMLWKP TPVYPRLVQR P+GLTLEEA  MRKKGR L
Sbjct: 318  GKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKL 377

Query: 936  TPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFE 757
             PICKLAKNGVY DLV NVREAFE CELVRI+CQGLN SDYRKIGAKLKDLVPCVLISFE
Sbjct: 378  IPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFE 437

Query: 756  REHILIWRGPHWK----------------SSIEPAKILKPLEEVKTDVAPTSILNSEKHD 625
             EHIL+WRG  WK                 +   A I  P E  +   + +S ++ +   
Sbjct: 438  HEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQELSASCSSKISVK--- 494

Query: 624  DNDDGDVLEKTISPTSSNEPDISVIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKNTEAV 445
             +   D+L+   SP  + +  +   +D                     +L  T  N + V
Sbjct: 495  -DTSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTV 553

Query: 444  TKSSS--------------------------VDLGPSL-------DFSCTEGVMLLRKRA 364
            +  +                           V+L   L       D  CT G++LL K+A
Sbjct: 554  SDDTGGTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNDAPCTGGLLLLLKQA 613

Query: 363  VEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSKQLAAEKDEQRRESDESRVK 184
            V+ G AVVLD DS DADIV+ + VAF+K AP GP +  R ++ A +K E          K
Sbjct: 614  VDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVF-RRPRKAAVQKCE----------K 662

Query: 183  EATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIK-----ADYLNIVPQGNLRVDELAKLL 19
            E   D    +++ A  +     K+S ++  +D K      DY  +  +G L VDELAKLL
Sbjct: 663  EEPRDLVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGTLGVDELAKLL 722

Query: 18   S 16
            +
Sbjct: 723  A 723


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  637 bits (1644), Expect = e-180
 Identities = 364/724 (50%), Positives = 453/724 (62%), Gaps = 63/724 (8%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNP---APPHLT 1828
            RP+TEV FSRW NANA KF +R RSQ+EIE+     +RF SA  I  NY+P   A   ++
Sbjct: 23   RPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSANNIVTNYDPKNAAEVDIS 82

Query: 1827 TFKXXXXXXXXXXXXXXXXXXXXSRN-PSSHPAFKPLVKPRHIPIKGDESTP---HKPEF 1660
             FK                    S+    +HPAF P  K   +P+  + + P    K + 
Sbjct: 83   FFKSTGTPSSPSSPSIPGKKSKYSKPLKKTHPAFLP--KITRVPLPRNNAKPPIDRKADI 140

Query: 1659 KIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSK 1480
            K+ E+G+SY +  APF ++YSYTETPKVKP+KLRE   +PFGP TM +PW GR PL PSK
Sbjct: 141  KLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPSK 200

Query: 1479 RKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGS 1300
            +KL EFDSF LPPP KKGVKPVQAPGP+LPG+GP+Y ++R+EILG+PLT+EEI+ L++G 
Sbjct: 201  KKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDGC 260

Query: 1299 RKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKII 1120
             K  RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVC+QLEE+TGGKII
Sbjct: 261  LKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKII 320

Query: 1119 YCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRD 940
            Y +GGV+YLFRGRNYN+R RPR+PLMLWKP TPVYPRL+QR P+GLTL+EAS MR KGR 
Sbjct: 321  YRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGRK 380

Query: 939  LTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISF 760
            L PICKL KNGVY DLVRNVREAFE CELVRI+CQG+N SD+RKIGAKL+DLVPCVLISF
Sbjct: 381  LIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLISF 440

Query: 759  EREHILIWRGPHWK---------------SSIEPAKILKPL------EEVKTDVAPTSIL 643
            E EHIL+WRG  WK               SSI+ A    PL      E      A T  L
Sbjct: 441  ECEHILMWRGRDWKSSFTKPVNDGDEAKNSSIDGATSATPLLEGLQNETFSVKDASTLNL 500

Query: 642  NSEKHDDNDDG-DVLEKTISPT---------------SSNEPDIS--------------- 556
             + + D  D G D+ +K I  T               S   PD                 
Sbjct: 501  KTSRMDAEDQGEDLSQKDIDETFAAKIFISTSTEIYESKTTPDNDDSSAVTKSEAMRIAS 560

Query: 555  ----VIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKNTEAVTKSSSVDLGPSLDFSCTEG 388
                ++DD                    +E    ++  + V++ S V     L+ S T+G
Sbjct: 561  GSEVILDD--RGYIDEMLITTSVESDTTLERIGNMEKLQNVSEGSHVSELAKLNESYTQG 618

Query: 387  VMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSKQLAAEKDEQRR 208
            V+ L K+AVE G AVVLD  +LDAD V+++AVAFA++AP GP +  + +    +K E  +
Sbjct: 619  VLELLKQAVEIGSAVVLD-ANLDADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEM-Q 676

Query: 207  ESDESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADYLNIVPQGNLRVDELA 28
            E+ E  VK+ T           S+      + S+  + +     Y++ VPQG+LRVDELA
Sbjct: 677  ENGELEVKQVT---------SFSKMGGGSERKSSKVRRKYFNEQYVDSVPQGSLRVDELA 727

Query: 27   KLLS 16
            KLL+
Sbjct: 728  KLLA 731


>ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutrema salsugineum]
            gi|557110072|gb|ESQ50369.1| hypothetical protein
            EUTSA_v10001924mg [Eutrema salsugineum]
          Length = 678

 Score =  625 bits (1611), Expect = e-176
 Identities = 337/667 (50%), Positives = 431/667 (64%), Gaps = 10/667 (1%)
 Frame = -2

Query: 1986 EVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTTFKXXXX 1807
            E+RFSRW NANA++F +R RSQ+E+E + R ++RFD+A +I H ++ A    +  K    
Sbjct: 27   EIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATSIVHTHDSAAA-ASEPKTSPF 85

Query: 1806 XXXXXXXXXXXXXXXXSRNPSSHPAFKPLVKPRHIPIKGDESTPH---KPEFKIDENGIS 1636
                             R+  S P   P  KP++ P K  +S P    KPE K+ E+G+S
Sbjct: 86   RSRGTPSLPSARSIPGRRSKYSKPDSGP-TKPKNKP-KVPDSPPQLDAKPEVKLSEDGLS 143

Query: 1635 YEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKRKLPEFDS 1456
            Y +  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR PL  S++   EFDS
Sbjct: 144  YVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPREFDS 203

Query: 1455 FKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSRKCSRQLN 1276
            F+LPP  KKGVKP+Q PGP+ PG GP+YV +++EILGEPLTKEEI  L+    K +RQLN
Sbjct: 204  FRLPPVGKKGVKPIQKPGPFRPGVGPRYVYTKEEILGEPLTKEEIRELVTSCLKTTRQLN 263

Query: 1275 MGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIYCRGGVIY 1096
            MGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDNVCEQLEEK GGK+IY RGGVI+
Sbjct: 264  MGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVIF 323

Query: 1095 LFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDLTPICKLA 916
            LFRGRNYNHR+RPR+PLMLWKP  PVYPRL+Q+VP+GLT +EA+ MR+KGR+L PICKL 
Sbjct: 324  LFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATEMRRKGRELMPICKLG 383

Query: 915  KNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFEREHILIW 736
            KNGVY DLV+NV+EAFE CELVRIDCQG+  SD+RKIGAKLKDLVPCVLISFE E ILIW
Sbjct: 384  KNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLISFENEQILIW 443

Query: 735  RGPHWKSSI-EPAKILKPLEEVKTDVAPTSILNSEKHDDNDDGDVLEKTISPTSSNE--P 565
            RG  WKSS+  P K    L +++ D A     + E  +  +   V+ +  SP  S E   
Sbjct: 444  RGREWKSSLTTPDKKDDILGDIEVDTALPEGDDDEASESPNQTQVVTQN-SPLGSKELQN 502

Query: 564  DISVIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKNTEAVTKSSSVDLGPSLDFSCTEGV 385
            D S +D                     ++ + T ++          +    ++    E V
Sbjct: 503  DQSAVD-----------ILAMEGRNSSLQSSSTERDNSLGDHQEPEEESEEINTQSIERV 551

Query: 384  MLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPH-RSKQLAAEKDEQRR 208
            + L K+AVE G A+VL+   LDAD VF ++VAF+  A  GP + H   K+   +K E  R
Sbjct: 552  LNLMKQAVESGNAIVLEATDLDADTVFAKSVAFSSVATPGPVFQHGLRKEPMVKKQENHR 611

Query: 207  ESDESRVKEAT---VDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADYLNIVPQGNLRVD 37
            E     ++  T   V     ++ V   R +   K    +K+E+   DY  ++P G L+VD
Sbjct: 612  EFGYQNLEAKTSNVVFSREKEVAVGVERDEKKEKEGLKKKLEEFDEDYREVIPHGTLKVD 671

Query: 36   ELAKLLS 16
            ELAKLL+
Sbjct: 672  ELAKLLA 678


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
            lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
            ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  620 bits (1599), Expect = e-175
 Identities = 344/694 (49%), Positives = 437/694 (62%), Gaps = 33/694 (4%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNP----APPHL 1831
            R  +E+RFSRW NANA++F +R RSQ+E+E + R ++RFD+A  I H ++     + P  
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSEAAASEPKT 82

Query: 1830 TTFKXXXXXXXXXXXXXXXXXXXXSRNPSSHPAFKPLVKPRHIPIKGDESTPH---KPEF 1660
            + F+                    S+ P S P  KP  KPR +P    +S P    KPE 
Sbjct: 83   SPFRSRGTPSLPSARSIPGRRSKYSK-PDSGPN-KPKNKPR-VP----DSPPQLDAKPEV 135

Query: 1659 KIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSK 1480
            K+ E+G+SY +  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR PL  S+
Sbjct: 136  KLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQ 195

Query: 1479 RKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGS 1300
            +   EFDSF+LPP  KKGVKPVQ PGP+ PG GP+YV +++EILGEPLTKEEI  L+   
Sbjct: 196  KTPREFDSFRLPPDGKKGVKPVQKPGPFRPGLGPRYVYTKEEILGEPLTKEEIRELVTSC 255

Query: 1299 RKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKII 1120
             K +RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMD VCEQLEEK GGK+I
Sbjct: 256  LKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDKVCEQLEEKIGGKVI 315

Query: 1119 YCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRD 940
            Y RGGV++LFRGRNYNHR+RPR+PLMLWKP  PVYPRL+Q+VP+GLTL+EA+ MR+KGR+
Sbjct: 316  YRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTLQEATEMRRKGRE 375

Query: 939  LTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISF 760
            L PICKL KNGVY DLV+NV+EAFE CELVRIDCQG+  SD+RKIGAKLKDLVPCVLISF
Sbjct: 376  LMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLISF 435

Query: 759  EREHILIWRGPHWKSSIE-PAKILKPLEEVKTDVAPTSILNSEKHDDNDDGDVLEKTISP 583
            E E ILIWRG  WKSS+  P K    LE+++ D A           ++D+  V       
Sbjct: 436  ENEQILIWRGREWKSSLTIPDKKDDILEDIEVDAALP---------EDDEASVSPNQTQT 486

Query: 582  TSSNEP--DISVIDDPXXXXXXXXXXXXXXXXXXEIELND-TVKNTEAVTKSSSV----- 427
             + N P   + + +DP                     L   + K+    T  SS+     
Sbjct: 487  VTQNPPLDSMELQNDPGGHDLSPSTVDFSAMEDTSNSLQSPSTKDLTEPTADSSIQDHEE 546

Query: 426  -----DLGPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGP 262
                 +    +     E V+ L K+AVE G A+VLD   LDAD VF +AV F+  A  GP
Sbjct: 547  PEHEPETSEEISKQSIERVLNLMKQAVESGTALVLDAADLDADTVFSKAVTFSTVASPGP 606

Query: 261  RYPH-RSKQLAAEKDEQRR------ESDESRVKEATVDKTPSQLMVASRRR-----DDGR 118
             + H   KQ   +K E R       E+  S V  +      S ++V+ +R      +   
Sbjct: 607  VFQHGLRKQPTVKKQESREFGYRNLEAKSSNVVVSRNASKSSNVVVSGKREVAVSGEREE 666

Query: 117  KNSTSRKMEDIKADYLNIVPQGNLRVDELAKLLS 16
            K    +KM++   DY  ++P G L++DELAKLL+
Sbjct: 667  KEGLKKKMDEFAEDYREVIPHGTLKLDELAKLLA 700


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  619 bits (1596), Expect = e-174
 Identities = 341/700 (48%), Positives = 442/700 (63%), Gaps = 39/700 (5%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNP----APPHL 1831
            R  +E+RFSRW NANA++F +R RSQ+E+E + R ++RFD+A  I H ++     A P  
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSEAAAAEPKT 82

Query: 1830 TTFKXXXXXXXXXXXXXXXXXXXXSRNPSSHPAFKPLVKPRHIPIKGDESTPH---KPEF 1660
            + F+                    S+ P S P  +P  KPR +P    +S P    KPE 
Sbjct: 83   SPFRSRGTPSLPSARSIPGRRSKYSK-PDSGPN-RPKNKPR-VP----DSPPQLDAKPEV 135

Query: 1659 KIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSK 1480
            K+ E+G++Y +  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR PL  S+
Sbjct: 136  KLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQ 195

Query: 1479 RKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGS 1300
            +   EFDSF+LPP  KKG+KPVQ PGP+ PG GP+YV S++EILGEPLTKEE+  L+   
Sbjct: 196  KTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSC 255

Query: 1299 RKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKII 1120
             K +RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDNVCEQLEEK GGK+I
Sbjct: 256  LKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVI 315

Query: 1119 YCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRD 940
            Y RGGV++LFRGRNYNHR+RPR+PLMLWKP  PVYPRL+Q+VP+GLT +EA+ MR+KGR+
Sbjct: 316  YRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRE 375

Query: 939  LTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISF 760
            L PICKL KNGVY DLV+NV+EAFE CELVRIDCQG+  SD+RKIGAKLKDLVPCVL+SF
Sbjct: 376  LMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSF 435

Query: 759  EREHILIWRGPHWKSSI-EPAKILKPLEEVKTDVA------------------PTSILNS 637
            E E ILIWRG  WKSS+  P K    LE+++ D A                      L+S
Sbjct: 436  ENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQTMTQNPPLDS 495

Query: 636  EKHDDNDDGDVLEKTISPTSSNEPDISVIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKN 457
             +  ++ DG  L  +   +S  E  I+ +                       E  D  + 
Sbjct: 496  MELQNDPDGHDLSPSTVDSSEMEGTINSLQS--WSTKDVTEPTVDSFLRDLEEPEDEPET 553

Query: 456  TEAVTKSSSVDLGPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKT 277
            +E ++K S             E V++L K+AVE G A+VLD   LDAD VF +AVAF+  
Sbjct: 554  SEEISKQS------------IERVLILMKQAVESGTALVLDAADLDADTVFSKAVAFSSV 601

Query: 276  APMGPRYPHRSKQLAAEKDEQRRESD----ESRVKEATVDKTPSQLM---------VASR 136
            A  GP + H  ++    K ++ +E      E++     V +  S+           VA R
Sbjct: 602  ASPGPVFQHGLRKQPTVKKQESQEFGYGDLEAKSSNVVVSRNASKSSNVVVFGKREVAER 661

Query: 135  RRDDGRKNSTSRKMEDIKADYLNIVPQGNLRVDELAKLLS 16
               + ++  + +KM++   DY  ++P G L+VDELAKLL+
Sbjct: 662  GEREEKEEGSKKKMDEFAEDYREVMPHGTLKVDELAKLLA 701


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
            gi|482565819|gb|EOA30008.1| hypothetical protein
            CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score =  611 bits (1576), Expect = e-172
 Identities = 335/682 (49%), Positives = 428/682 (62%), Gaps = 21/682 (3%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNP---APPHLT 1828
            R  +E+RFSRW NANA++F +R RSQ+E+E + R ++RFD+A  I H ++    A    T
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSDAAASESKT 82

Query: 1827 TFKXXXXXXXXXXXXXXXXXXXXSRNPSSHPAFKPLVKPRHIPIKGDESTPH---KPEFK 1657
            +                         P S P  KP  KPR +P    +S P    K E K
Sbjct: 83   SPFRSRGTPSLPSARSIPGRRSKYSKPDSGPN-KPKNKPR-VP----DSPPQLDAKAEVK 136

Query: 1656 IDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKR 1477
            + E+G+SY +  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR PL  S++
Sbjct: 137  LSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQK 196

Query: 1476 KLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSR 1297
               +FDSF+LPP  KKGVKPVQ PGP+ PG GP+YV +++EILGEPLTKEEI  L+    
Sbjct: 197  TPRDFDSFRLPPVGKKGVKPVQKPGPFRPGIGPRYVYTKEEILGEPLTKEEIRELVTSCL 256

Query: 1296 KCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIY 1117
            K +RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDN+CEQLEEK GGK+IY
Sbjct: 257  KTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNICEQLEEKIGGKVIY 316

Query: 1116 CRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDL 937
             RGGV++LFRGRNYNHR+RPR+PLMLWKP  PVYP+L+Q+VP+GLT  EA+ MR+KGR+L
Sbjct: 317  RRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPKLIQQVPEGLTRLEATEMRRKGREL 376

Query: 936  TPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFE 757
             PICKL KNGVY DLV+NV+EAFE CELVRIDCQGL  SD+RKIGAKLKDLVPCVLISFE
Sbjct: 377  MPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGLKASDFRKIGAKLKDLVPCVLISFE 436

Query: 756  REHILIWRGPHWKSSI-EPAKILKPLEEVKTDVAPTSILNSEKHDDNDDGDVLEKTISPT 580
             E ILIWRG  WKSS+  P K    L +++ D A    L  +    + D        SP 
Sbjct: 437  NEQILIWRGREWKSSLTTPDKKDDYLRDIEVDTA----LPEDDEPSSPDQPQTVIQNSPL 492

Query: 579  SSNEPDISVIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKNTEAVTKSSSV--------- 427
             S E      ++P                     L     +   +T  SS+         
Sbjct: 493  GSMESQ----NNPDGHDLSPSTVDFLAMEGTSSSLRSLSTDVTELTADSSLGDDQEPEPE 548

Query: 426  -DLGPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPH 250
             +    +     E V+ L  +AVE G A+VLD   LDAD VF +AVAF+  A  GP + H
Sbjct: 549  PEKSEEISKQSIERVLNLMNQAVESGTALVLDSTELDADTVFAKAVAFSAVAAPGPAFQH 608

Query: 249  RSKQLAAEKDEQRRESD----ESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIK 82
              ++    K +++RES     E++V    V     ++  + +R +   +    +K+++  
Sbjct: 609  GLRKQPMVKKQEKRESGYRSVEAKVSNVVV-TVKKEVAFSVKREEKEEEGGLKKKIDEFD 667

Query: 81   ADYLNIVPQGNLRVDELAKLLS 16
             DY  ++P G L+VDELAKLL+
Sbjct: 668  EDYREVLPHGTLKVDELAKLLA 689


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  596 bits (1537), Expect = e-167
 Identities = 297/468 (63%), Positives = 353/468 (75%), Gaps = 10/468 (2%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSA---QTIAHNYNPAPPHLT 1828
            RP TEVRF+RWNNANA+KF +R R+Q+EIED  R E+RFDSA    T++   +      T
Sbjct: 28   RPPTEVRFARWNNANAEKFNQRRRAQQEIEDDFRRERRFDSATRIATVSVAGSSTSDAET 87

Query: 1827 TFKXXXXXXXXXXXXXXXXXXXXSR----NPSSHPAFKPLVKPRHIP--IKGDESTPHKP 1666
             FK                    S     NPSSHPAF+ ++KP  +    +       K 
Sbjct: 88   AFKSIGTPSSPSRPSIPGKKSKYSENPNPNPSSHPAFRRVIKPTKLSSITREKPEVDRKA 147

Query: 1665 EFKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNP 1486
               I ++G+SY +  APF ++YSYTETPK KP+KLREP  +PFGP TM +PW GR PL  
Sbjct: 148  NISIGDDGLSYVIDGAPFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPA 207

Query: 1485 SKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIE 1306
            SK+K+ EFDSF+LPPPHKKGV+PVQ+PGPYLPGSGPKYV+SR+EILG+PLT +E++ L+ 
Sbjct: 208  SKKKMKEFDSFQLPPPHKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVN 267

Query: 1305 GSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGK 1126
            G  K  RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDM+NVC+QLEE+TGGK
Sbjct: 268  GCIKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGK 327

Query: 1125 IIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKG 946
            IIY RGGVI+LFRGRNYN+++RPR+PLMLW+P TPVYPRL+QR P+GLT+EEA+ MRKKG
Sbjct: 328  IIYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKG 387

Query: 945  RDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLI 766
            RDL PI KL KNGVY DLV NVREAFE CELVRIDCQG+N SDYRKIGAKLKDLVPCVLI
Sbjct: 388  RDLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLI 447

Query: 765  SFEREHILIWRGPHWKSS-IEPAKILKPLEEVKTDVAPTSILNSEKHD 625
            SFERE IL+WRG  WKSS + P   LK ++E   D +P+  L+ E  D
Sbjct: 448  SFERESILMWRGREWKSSLVNPESNLKEVKESNVDDSPSIALSLEGED 495



 Score = 89.7 bits (221), Expect = 5e-15
 Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
 Frame = -2

Query: 453  EAVTKSSSVDLGPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTA 274
            +A   S +++    L  +C E V+ L   AV  G A++LD  SLDADI+++ AV  AK+A
Sbjct: 654  DASVASQNLNERAKLCAACKEKVLSLLNEAVGSGSALILDDSSLDADIIYQRAVDLAKSA 713

Query: 273  PMGPRYPHRSKQLAAEK------DEQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKN 112
            P GP + HRS + +A+        +Q++E+ E  VKE TV     Q  +  ++R + + +
Sbjct: 714  PPGPVFKHRSSRGSAQMRKKLVVRKQKQEATELEVKEITV--YDMQRNLGEKKRSERKDS 771

Query: 111  STSR-KMEDIKADYLNIVPQGNLRVDELAKLLS 16
               R +  D      +IVPQG+LRVDELAKLL+
Sbjct: 772  KVHRTRTRDFGEPLDSIVPQGSLRVDELAKLLA 804


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  592 bits (1525), Expect = e-166
 Identities = 297/466 (63%), Positives = 347/466 (74%), Gaps = 13/466 (2%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTT-- 1825
            RPATE+RFSRWNNANA++F +R R+Q+EIED  R  +RFDSA  I  +Y+ +    T   
Sbjct: 30   RPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATNGV 89

Query: 1824 -FKXXXXXXXXXXXXXXXXXXXXSRNPSS----HPAFKPLVKPRHIPIKGDES-TPHKPE 1663
             FK                    S+  ++    HPAF+ + K      K  E     K  
Sbjct: 90   AFKSAGTPSSPSRPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPEKPAASKSN 149

Query: 1662 FKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPS 1483
              I E+G+SY +  APF ++YSYTE PK KP+KLRE   SPFGP TM +PW GR PL PS
Sbjct: 150  ISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPS 209

Query: 1482 KRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEG 1303
            K+KL EFDSF+LPPP+KKGVKPVQ PGPYLPG+GP+YV +R+EILGEPLT EE+  L+E 
Sbjct: 210  KKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVES 269

Query: 1302 SRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKI 1123
             ++ SRQLNMGRDGLTHNMLDNIHA WKRRR CKIKCKGVCTVDMDNVCEQLEE+TGGKI
Sbjct: 270  VKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKI 329

Query: 1122 IYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGR 943
            IY RGGV+YLFRGRNYN+R+RP +PLMLWKP TPVYPRL+Q+VPDGLTLEEA+ MRKKGR
Sbjct: 330  IYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGR 389

Query: 942  DLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLIS 763
             L PICKL KNGVY DL +NVREAFE CELVRI+CQG+N SDYRKIGAKL+DLVPCVLIS
Sbjct: 390  KLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLIS 449

Query: 762  FEREHILIWRGPHWKSSI-EPAKILKPLEEVKTD----VAPTSILN 640
            FEREHIL+WRG  WKSSI +P    +  +E K D    VAP +  N
Sbjct: 450  FEREHILMWRGQEWKSSILKPGNDSEDAKESKVDGSISVAPPTAGN 495



 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 53/138 (38%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
 Frame = -2

Query: 420  GPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSK 241
            GPSL+      V+ L ++AVE G AVVLD  +LDAD +++ +VAFAK+AP GP +  RS+
Sbjct: 712  GPSLEI-----VLHLMRQAVENGSAVVLDDATLDADSIYERSVAFAKSAPPGPVFQQRSR 766

Query: 240  QLAAEKDEQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADY-LNI 64
            ++A +K E ++E+   ++K    +      MV S  R + R+++  +     + ++ L++
Sbjct: 767  KIAIQKGE-KKEAGHLKMKREVPN------MVVSENRGNVRQSNRKKTKNSDEIEHGLDV 819

Query: 63   V--PQGNLRVDELAKLLS 16
            V  PQG+L++DELAKLL+
Sbjct: 820  VLSPQGSLKIDELAKLLA 837


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  592 bits (1525), Expect = e-166
 Identities = 297/466 (63%), Positives = 347/466 (74%), Gaps = 13/466 (2%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTT-- 1825
            RPATE+RFSRWNNANA++F +R R+Q+EIED  R  +RFDSA  I  +Y+ +    T   
Sbjct: 36   RPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATNGV 95

Query: 1824 -FKXXXXXXXXXXXXXXXXXXXXSRNPSS----HPAFKPLVKPRHIPIKGDES-TPHKPE 1663
             FK                    S+  ++    HPAF+ + K      K  E     K  
Sbjct: 96   AFKSAGTPSSPSRPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPEKPAASKSN 155

Query: 1662 FKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPS 1483
              I E+G+SY +  APF ++YSYTE PK KP+KLRE   SPFGP TM +PW GR PL PS
Sbjct: 156  ISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPS 215

Query: 1482 KRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEG 1303
            K+KL EFDSF+LPPP+KKGVKPVQ PGPYLPG+GP+YV +R+EILGEPLT EE+  L+E 
Sbjct: 216  KKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVES 275

Query: 1302 SRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKI 1123
             ++ SRQLNMGRDGLTHNMLDNIHA WKRRR CKIKCKGVCTVDMDNVCEQLEE+TGGKI
Sbjct: 276  VKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKI 335

Query: 1122 IYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGR 943
            IY RGGV+YLFRGRNYN+R+RP +PLMLWKP TPVYPRL+Q+VPDGLTLEEA+ MRKKGR
Sbjct: 336  IYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGR 395

Query: 942  DLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLIS 763
             L PICKL KNGVY DL +NVREAFE CELVRI+CQG+N SDYRKIGAKL+DLVPCVLIS
Sbjct: 396  KLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLIS 455

Query: 762  FEREHILIWRGPHWKSSI-EPAKILKPLEEVKTD----VAPTSILN 640
            FEREHIL+WRG  WKSSI +P    +  +E K D    VAP +  N
Sbjct: 456  FEREHILMWRGQEWKSSILKPGNDSEDAKESKVDGSISVAPPTAGN 501



 Score = 67.0 bits (162), Expect = 3e-08
 Identities = 41/113 (36%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
 Frame = -2

Query: 420  GPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSK 241
            GPSL+      V+ L ++AVE G AVVLD  +LDAD +++ +VAFAK+AP GP +  RS+
Sbjct: 718  GPSLEI-----VLHLMRQAVENGSAVVLDDATLDADSIYERSVAFAKSAPPGPVFQQRSR 772

Query: 240  QLAAEKDEQRRESDESRVKEATVDKTPSQLMVASR---RRDDGRKNSTSRKME 91
            ++A +K E ++E+   ++K     + P+ ++  +R   R+ + +K   S ++E
Sbjct: 773  KIAIQKGE-KKEAGHLKMKR----EVPNMVVSENRGNVRQSNRKKTKNSDEIE 820


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  591 bits (1524), Expect = e-166
 Identities = 296/433 (68%), Positives = 336/433 (77%), Gaps = 6/433 (1%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAH----NYNPAPPHL 1831
            RPA+EVRFSRWNNANA++F  RER+QKEIED  R E+RFDSA  IA       +      
Sbjct: 20   RPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAAAA 79

Query: 1830 TTFKXXXXXXXXXXXXXXXXXXXXSRNP-SSHPAFKPLVKPRHIPIKGDESTPH-KPEFK 1657
             TFK                    S+N  +SHPAF+ + +   +P  G   +P  K    
Sbjct: 80   GTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLP--GPNISPEAKRGIS 137

Query: 1656 IDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKR 1477
            I E+G+SY +P  PF  +YSYTETPKVKP+ LREP   PFGP+TM +PW GR PL PSK+
Sbjct: 138  IGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPSKK 197

Query: 1476 KLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSR 1297
            KL EFDSF+LPPP KK VKPVQAPGP+LPGSGP+YVRSR+EILGEPLT+EEI+ L++G  
Sbjct: 198  KLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQGCV 257

Query: 1296 KCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIY 1117
            K  RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV +QLEEKTGGK+IY
Sbjct: 258  KSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIY 317

Query: 1116 CRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDL 937
             +GGV++LFRGRNYN+R+RPR+PLMLWKP TPVYPRLVQR P+GLTLEEA  MRKKGR L
Sbjct: 318  GKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKL 377

Query: 936  TPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFE 757
             PICKLAKNGVY DLV NVREAFE CELVRI+CQGLN SDYRKIGAKLKDLVPCVLISFE
Sbjct: 378  IPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFE 437

Query: 756  REHILIWRGPHWK 718
             EHIL+WRG  WK
Sbjct: 438  HEHILMWRGSDWK 450



 Score = 80.5 bits (197), Expect = 3e-12
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
 Frame = -2

Query: 399 CTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSKQLAAEKD 220
           CT G++LL K+AV+ G AVVLD DS DADIV+ + VAF+K AP GP +  R ++ A +K 
Sbjct: 631 CTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVF-RRPRKAAVQKC 689

Query: 219 EQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIK-----ADYLNIVPQ 55
           E          KE   D    +++ A  +     K+S ++  +D K      DY  +  +
Sbjct: 690 E----------KEEPRDLVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTR 739

Query: 54  GNLRVDELAKLLS 16
           G L VDELAKLL+
Sbjct: 740 GTLGVDELAKLLA 752


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  585 bits (1509), Expect = e-164
 Identities = 301/475 (63%), Positives = 352/475 (74%), Gaps = 26/475 (5%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTT-- 1825
            R  TE+RFSRWNNANA+KF  R R+ ++IED  R ++RFDSA  I+   + A P      
Sbjct: 25   RLPTELRFSRWNNANAEKFNERRRTLQQIEDDIRRQRRFDSATRISDIPDSASPSTAGSA 84

Query: 1824 ----FKXXXXXXXXXXXXXXXXXXXXSRNPS------SHPAFKPLVKPRHIPIKGDESTP 1675
                FK                    S+NP+      SHPAF+PL + R I +K     P
Sbjct: 85   TGEFFKSIGTPSSPSRPSIPGKKSKYSKNPNPSFDSRSHPAFRPLRRVRKIAVKELSGLP 144

Query: 1674 -------HKPEFKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAK 1516
                    K + ++ E+G+SY +  APF ++YSYTETPK +PVKLRE   +PFGP TM +
Sbjct: 145  KDKRDVERKADVRVGEDGVSYVIDGAPFEFKYSYTETPKAQPVKLREAPYAPFGPTTMPR 204

Query: 1515 PWLGRKPLNPSKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPL 1336
            PW GR PL PSK+KL EFDSF+L PPHKKGVKPVQAPGP+LPGSGPKYV SR+EILGEPL
Sbjct: 205  PWTGRAPLPPSKKKLKEFDSFRLSPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGEPL 264

Query: 1335 TKEEIEALIEGSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVC 1156
            T+EEI+ LIEG RK  RQ+NMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV 
Sbjct: 265  TEEEIKDLIEGCRKTKRQMNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVK 324

Query: 1155 EQLEEKTGGKIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTL 976
            EQLEE+TGGKIIY +GGVI+LFRGRNYN+R+RPR+PLMLWKP TPVYPRLV+RVP+GLTL
Sbjct: 325  EQLEERTGGKIIYGKGGVIFLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLTL 384

Query: 975  EEASVMRKKGRDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAK 796
            EEA  MRKKG  L PICKL KNGVY +LV++VREAFE CELVRI+CQG+N SDYRKIGAK
Sbjct: 385  EEAKEMRKKGHKLMPICKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGSDYRKIGAK 444

Query: 795  LKDLVPCVLISFEREHILIWRGPHWKSSIEPAKILKPLEEVK-------TDVAPT 652
            LKDLVPCVL+SF  EHILIWRG  WKSS+   K++K  +E K       T VAP+
Sbjct: 445  LKDLVPCVLLSFAFEHILIWRGCDWKSSL--PKLVKDRDEAKESDVQIVTSVAPS 497



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
 Frame = -2

Query: 411  LDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPRYPHRSKQLA 232
            L+  CTEGV+ L ++AV  G+A++LD D+LD+D+V++  VAF+++AP GP +  R +++ 
Sbjct: 660  LNAPCTEGVLSLLQQAVVGGLAIILDEDNLDSDVVYQRTVAFSQSAPPGPVFKGRPRKML 719

Query: 231  AEKDEQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADYLN-IVPQ 55
             +K   +        K+ T D  P ++     +   G+K S +R+ +D   +  N +VPQ
Sbjct: 720  PKKVMVKNSEVLENEKQDTEDFAPKEIRTIYVKEGSGKKASKARRRKDFGENLDNVVVPQ 779

Query: 54   GNLRVDELAKLLS 16
            G+LRVDELAKLL+
Sbjct: 780  GSLRVDELAKLLA 792


>ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao] gi|508783438|gb|EOY30694.1| RNA-binding
            CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  580 bits (1496), Expect = e-163
 Identities = 290/457 (63%), Positives = 343/457 (75%), Gaps = 5/457 (1%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNP--APPHLTT 1825
            RP TE+RFSRWNNANA+KF +R+R+Q+EIED  R  +RFDSA  IA   +P  A P  T 
Sbjct: 29   RPPTEIRFSRWNNANAEKFNQRQRAQQEIEDDIRRYRRFDSATKIAITIDPSSASPRPTE 88

Query: 1824 FKXXXXXXXXXXXXXXXXXXXXSRNPSSHPAFKPLVKPRHIPIKGDESTP--HKP-EFKI 1654
                                     P +HPAF+   K  + P      TP   KP    I
Sbjct: 89   TYKSLGSPSSPSNPSIPGKKSKYSKPPNHPAFRKFSKTANPP----PPTPLDKKPANVSI 144

Query: 1653 DENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKRK 1474
             ++GIS+ +  APF ++YSYTETPKVKP+KLREP  SPFGP TM +PW GR PL PSK+K
Sbjct: 145  GDDGISFVIDGAPFEFKYSYTETPKVKPIKLREPPYSPFGPSTMPRPWTGRAPLPPSKKK 204

Query: 1473 LPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSRK 1294
            + EFDSF LPPP+KKGVKP+Q PGPYLPG+GP+YV+SR+EILGEPL  EE++ L+ G  K
Sbjct: 205  MKEFDSFVLPPPNKKGVKPIQKPGPYLPGTGPRYVQSREEILGEPLNAEEVKELVNGCLK 264

Query: 1293 CSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIYC 1114
              RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVCEQLEE+TGGK+IY 
Sbjct: 265  SKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQLEERTGGKVIYR 324

Query: 1113 RGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDLT 934
            RGGV++LFRGRNYN+++RPR+PLMLWKP TP+YPRL+Q+ P+GLT+EE S MRKKGR L 
Sbjct: 325  RGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPMYPRLIQKAPEGLTVEEMSEMRKKGRKLM 384

Query: 933  PICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFER 754
            PICKLAKNGVY DLV+NVREAFE CELVR++C+G+  SDYRKIGAKLK+LVPCVLISFE 
Sbjct: 385  PICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLISFEN 444

Query: 753  EHILIWRGPHWKSSIEPAKILKPLEEVKTDVAPTSIL 643
            E IL+WRG +WKSS         +EE   + A TSIL
Sbjct: 445  ESILMWRGRNWKSSFLKPAFNSGVEERDAENA-TSIL 480



 Score =  103 bits (257), Expect = 3e-19
 Identities = 107/457 (23%), Positives = 200/457 (43%), Gaps = 14/457 (3%)
 Frame = -2

Query: 1344 EPLTKEEIEALIEGSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMD 1165
            E LT EE+  + +  RK      + ++G+  +++ N+   ++   + ++ C+G+   D  
Sbjct: 366  EGLTVEEMSEMRKKGRKLMPICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYR 425

Query: 1164 NVCEQLEEKTGGKIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDG 985
             +  +L+E     +I      I ++RGRN             WK    + P     V + 
Sbjct: 426  KIGAKLKELVPCVLISFENESILMWRGRN-------------WKSSF-LKPAFNSGVEER 471

Query: 984  LTLEEASVMRK-KGRDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRK 808
                  S++ + +G++L+P+C  A    Y D    + +         I  +    S  + 
Sbjct: 472  DAENATSILGQLEGQELSPVCVQAG---YTDQPLMISQ--------EISIEQRESSVEKD 520

Query: 807  IGAKLKDLVPCVLISFEREHILIWRGPHWKSSIEPAKILKPLEEVKTDVAPTSILNSEKH 628
                + D  P  + + E             S+++         E K + +  +    +  
Sbjct: 521  RPNAVLDAKPAKMETIE-------------STLDRIDYANDESESKRNTSGGATFFGDIK 567

Query: 627  DDNDDGDVLEKTISPTSSNEPDISVIDDPXXXXXXXXXXXXXXXXXXEIELNDTVKNTEA 448
              + + + + KT SP    EP   ++D+P                      N   ++  +
Sbjct: 568  CASSESETMSKTYSP----EP---ILDNPGIENEEPVALPLESDVMPRSSENTLSQSESS 620

Query: 447  VTKSSSVDL------------GPSLDFS-CTEGVMLLRKRAVEKGMAVVLDHDSLDADIV 307
            V  S ++D             GP+   + CTE V+L  K+AVE G AVVLD  +LDADI+
Sbjct: 621  VMDSLNLDQLEDVAQASQDINGPARKTAPCTERVLLFMKQAVESGSAVVLDDATLDADII 680

Query: 306  FKEAVAFAKTAPMGPRYPHRSKQLAAEKDEQRRESDESRVKEATVDKTPSQLMVASRRRD 127
            ++ AVAFA++AP GP + H+ +++A +K+  ++E     VKE         L     +  
Sbjct: 681  YERAVAFARSAPPGPVFRHQPRKVAVQKN-GKQEPANLEVKE---------LKAVPNKGG 730

Query: 126  DGRKNSTSRKMEDIKADYLNIVPQGNLRVDELAKLLS 16
            + ++ S +++++ I   +L+IVP+G+L VDELAKLL+
Sbjct: 731  NEKQASKTQRIKYIDERHLDIVPRGSLGVDELAKLLA 767


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  579 bits (1493), Expect = e-162
 Identities = 290/488 (59%), Positives = 354/488 (72%), Gaps = 5/488 (1%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLTTFK 1819
            RP +++ FSRWNNANA++F  R R+QKEIE+  R  +RF+SA  I  NY+ A  +     
Sbjct: 29   RPPSDIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNSAANIIDNYDSATSNENFKS 88

Query: 1818 XXXXXXXXXXXXXXXXXXXXSRNPSS----HPAFKPLVKPRHIPIKGDESTPHKPEFKID 1651
                                   P S    HPAF+ + K    P+  ++      + K+ 
Sbjct: 89   KSIGTPSSPSAPSIPGRKSKYSKPESPTSHHPAFRSISKITKKPLP-EKPIDRNADVKLS 147

Query: 1650 ENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWLGRKPLNPSKRKL 1471
            E+G+S+ +  APF ++YSYTETPK KP+KLRE   SPFGP TM +PW GR PL PSK+KL
Sbjct: 148  EDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPSKKKL 207

Query: 1470 PEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKEEIEALIEGSRKC 1291
             EFDSFKLPPP KKGVKPVQ PGP+LPG+GP+YV SR+EILGEPLT EE++ LIEG  K 
Sbjct: 208  REFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCLKT 267

Query: 1290 SRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIYCR 1111
             RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKC GVCTVDMDNVC+QLEE+TGGK+IY +
Sbjct: 268  RRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRK 327

Query: 1110 GGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEASVMRKKGRDLTP 931
            GGV+YLFRGRNYN+R+RPR+PLMLWKP TPVYPRL++R P+GLTLEEAS MR+KGR L P
Sbjct: 328  GGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIP 387

Query: 930  ICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKDLVPCVLISFERE 751
            ICKLAKNGVY +LV+ VREAFE CELVRIDCQG+N SDYRK+GAKLK+LVPC+LISFE E
Sbjct: 388  ICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHE 447

Query: 750  HILIWRGPHWKSS-IEPAKILKPLEEVKTDVAPTSILNSEKHDDNDDGDVLEKTISPTSS 574
            HIL+WRG  WKSS I+P  +   +E + +DV   + + S   D      ++E        
Sbjct: 448  HILMWRGRDWKSSMIKP--VNDSVEAIGSDVNSATSIASVLED-----QIMEIVSHEDGL 500

Query: 573  NEPDISVI 550
            ++PD+S I
Sbjct: 501  SKPDMSTI 508



 Score = 87.4 bits (215), Expect = 2e-14
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
 Frame = -2

Query: 438  SSSVDLGPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVAFAKTAPMGPR 259
            S  V+   +L  S  + V+LL K+AVE G A++L    LDADIV++ AVAFAK+AP GP 
Sbjct: 608  SDDVNKPANLSVSYADRVLLLWKQAVESGSALILVDADLDADIVYQRAVAFAKSAPPGPV 667

Query: 258  YPHRSKQLAAEKDEQRRESDESRVKE----ATVDKTPSQLMVASRRRDDGRKNSTSRKME 91
            + HRSK+ +  K E ++ES +S  KE      ++   SQ M +  +    ++   SR+ +
Sbjct: 668  FRHRSKKASIRKSE-KQESKDSEPKEFLNLEYLETNVSQTMGSENKSSKPQRKKKSREQQ 726

Query: 90   DIKADYLNIVPQGNLRVDELAKLLS 16
            +     LN    G L VDELAKLL+
Sbjct: 727  N-----LNSARLGRLGVDELAKLLA 746


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  564 bits (1454), Expect = e-158
 Identities = 302/509 (59%), Positives = 362/509 (71%), Gaps = 38/509 (7%)
 Frame = -2

Query: 1998 RPATEVRFSRWNNANAQKFVRRERSQKEIEDQRRLEKRFDSAQTIAHNYNPAPPHLT--- 1828
            R  TE+RFSRW NANA+KF +R RSQ+EIED+ R E+RF SA  I    +   P      
Sbjct: 25   RTLTEIRFSRWYNANAEKFEQRRRSQQEIEDEIRRERRFSSAAKIVDLCDSDSPSSAIDR 84

Query: 1827 --TFKXXXXXXXXXXXXXXXXXXXXSRNPS--SHPAFKPLVK---------PRHIPIKGD 1687
              TF+                    S+NP+  S   F+ + K          RHI ++ +
Sbjct: 85   NETFRSVGTPSSPSRPSIPGRKSKYSKNPNPDSPSPFRQVSKTKKTMNAPEERHIGVEAN 144

Query: 1686 ESTPHKPEFKIDENGISYEMPAAPFLYQYSYTETPKVKPVKLREPLVSPFGPETMAKPWL 1507
             S        + E+G+SY +  APF ++YSYTETPKVKP+KLREP  +PFGP TM++PW 
Sbjct: 145  VS--------LSEDGVSYVIDGAPFEFKYSYTETPKVKPIKLREP-YAPFGPTTMSRPWT 195

Query: 1506 GRKPLNPSKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGSGPKYVRSRDEILGEPLTKE 1327
            GR PL PSK+KLPEFDSF+LPP +KKGVKPVQAPGP+L GSGPKYV SR+EILGEPLTKE
Sbjct: 196  GRAPLPPSKKKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKE 255

Query: 1326 EIEALIEGSRKCSRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCEQL 1147
            EI+ALI G    +RQLN+GRDGLTHNML+NIHALWKRRRVCKIKCKGVCTVDMDNV +QL
Sbjct: 256  EIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQL 315

Query: 1146 EEKTGGKIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKPQTPVYPRLVQRVPDGLTLEEA 967
            EE+TGGKIIY RGG +YL+RGRNYN+++RPR+PLMLWKP  PVYPRLV+ +PDGLTLEE 
Sbjct: 316  EERTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEV 375

Query: 966  SVMRKKGRDLTPICKLAKNGVYIDLVRNVREAFEACELVRIDCQGLNPSDYRKIGAKLKD 787
            + MRKKGR L PICKL KNGVY  LV++VREAFE CELVRI+CQGLN SD+RKIGAKLKD
Sbjct: 376  TEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKD 435

Query: 786  LVPCVLISFEREHILIWRGPHWKSSI-------EPAK--------ILKPLEEVKTDVAPT 652
            LVPCVLISFE EHIL+WRG  WKSS+       E AK        I+ P   ++ DV+  
Sbjct: 436  LVPCVLISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDETTIVAP--SIEQDVSVK 493

Query: 651  SILNSEKHDD-----NDDGD--VLEKTIS 586
            + L S   +D     N+D D  + EK+IS
Sbjct: 494  NTLTSLDSEDLSTGGNEDPDSMIAEKSIS 522



 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 60/152 (39%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
 Frame = -2

Query: 468  TVKNTEAVTKSSSVDLGPSLDFSCTEGVMLLRKRAVEKGMAVVLDHDSLDADIVFKEAVA 289
            T + ++A+TK +S         + T+GV+ L K+AVE G AVVLD  SLDAD++++++VA
Sbjct: 612  TSEGSQALTKPTS---------NATDGVLQLLKQAVENGSAVVLDSSSLDADVIYQQSVA 662

Query: 288  FAKTAPMGPRYPH-RSKQLAAEKDEQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKN 112
            F+++AP  P + H R K++AA+K E+   S E  VKE        +  V+    +D +K+
Sbjct: 663  FSQSAPPSPVFKHERRKKVAADKSEE-ETSRELEVKE-------EETAVSMEVGNDKKKD 714

Query: 111  STSRKMEDIKADYLNIVPQGNLRVDELAKLLS 16
            S ++K ++   +Y    PQG+L VDELAKLL+
Sbjct: 715  SKTKKNKNF-GEYNFSSPQGSLGVDELAKLLA 745


>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
            gi|548857270|gb|ERN15076.1| hypothetical protein
            AMTR_s00056p00043140 [Amborella trichopoda]
          Length = 977

 Score =  541 bits (1395), Expect = e-151
 Identities = 270/409 (66%), Positives = 315/409 (77%), Gaps = 11/409 (2%)
 Frame = -2

Query: 1740 HPAFKPLVKPRHIPIKGD---ESTPHKPEFKIDENGISYEMPAAPFLYQYSYTETPKVKP 1570
            HPAF+P+   + +   G     S   +  F + E+G+SY++  APF +QYSYTETPKVKP
Sbjct: 272  HPAFRPIRAYKPLRSHGSFSRNSEKSETGFSVGEHGVSYKLVNAPFEFQYSYTETPKVKP 331

Query: 1569 VKLREPLVSPFGPETMAKPWLGRKPLNPSKRKLPEFDSFKLPPPHKKGVKPVQAPGPYLP 1390
            + LREP   PFGP TM +PW GR PL PSK+KLPEFDSFKLPPPHKKGVKPVQAPGPYLP
Sbjct: 332  LALREPPFMPFGPSTMPRPWTGRAPLPPSKKKLPEFDSFKLPPPHKKGVKPVQAPGPYLP 391

Query: 1389 GSGPKYVRSRDEILGEPLTKEEIEALIEGSRKCSRQLNMGRDGLTHNMLDNIHALWKRRR 1210
            G+GP+YV+SR+EILGEPLT EE+ +LI    K  RQLNMGRDGLTHNMLDNIHA WKR R
Sbjct: 392  GTGPRYVKSREEILGEPLTTEEVNSLIRTCLKSKRQLNMGRDGLTHNMLDNIHAHWKRLR 451

Query: 1209 VCKIKCKGVCTVDMDNVCEQLEEKTGGKIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWKP 1030
             CKIKCKGVCTVDMDNVCEQLEEKTGGKIIY RGGV+YLFRGRNYN+R RPR+PLMLW+P
Sbjct: 452  ACKIKCKGVCTVDMDNVCEQLEEKTGGKIIYRRGGVLYLFRGRNYNYRLRPRFPLMLWRP 511

Query: 1029 QTPVYPRLVQRVPDGLTLEEASVMRKKGRDLTPICKLAKNGVYIDLVRNVREAFEACELV 850
             TPVYPRL+  VP+GLTLEEA  MRKKGR + PICKLAKNGVY+DLV+NV+EAFE CELV
Sbjct: 512  ITPVYPRLIPLVPEGLTLEEAKEMRKKGRKVPPICKLAKNGVYVDLVKNVKEAFEECELV 571

Query: 849  RIDCQGLNPSDYRKIGAKLKDLVPCVLISFEREHILIWRGPHWKSSIEPAKILKPLE--- 679
            RI+CQGLN SDY+KIGAKLKD+VPCVLISFE EHIL+WRG  W SS  P+K+    E   
Sbjct: 572  RINCQGLNASDYKKIGAKLKDIVPCVLISFENEHILMWRGRDWTSS--PSKLENDSETLE 629

Query: 678  --EVKTDV-APTSILNSEKHDDNDDGDVLEKTISPTSS--NEPDISVID 547
              EV ++  AP   +    + D     +  +  S TSS  N+ D + I+
Sbjct: 630  IAEVSSETGAPDPQILPISNPDTSSSALDTEKCSTTSSQPNQVDSNCIE 678



 Score = 70.9 bits (172), Expect = 2e-09
 Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
 Frame = -2

Query: 390  GVMLLRKRAVEKGMAVVLDHDS-LDADIVFKEAVAFAKTAPMGPRYPHR---SKQLAAEK 223
            GV+ LR+RAV +GMAVVLD  S +DA+IV+  AV  A TAP  P + H     +++   K
Sbjct: 850  GVLRLRERAVVEGMAVVLDEKSYIDANIVYDRAVKLALTAPKDPVFVHNRHNKREVLVNK 909

Query: 222  DEQRRESDESRVKEATVDKTPSQLMVASRRRDDGRKNSTSRKMEDIKADYLNIVPQGNLR 43
             ++R      R     V     +      +    RK S S K++  +  + + +P GNL 
Sbjct: 910  GKERGSELRGRENVGVVQVKAKESSERKVKEGSERKKS-SVKVQKRREVHFDAIPHGNLA 968

Query: 42   VDELAKLL 19
            VDELAKLL
Sbjct: 969  VDELAKLL 976


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  530 bits (1366), Expect = e-148
 Identities = 264/428 (61%), Positives = 316/428 (73%), Gaps = 25/428 (5%)
 Frame = -2

Query: 1752 NPSSHPAFKPLVKPRHIPIKGDESTPHKPEFKIDENGISYEMPAAPFLYQYSYTETPKVK 1573
            +P SHPA K    P+   +K    TP     KI E+G+SY +  APF ++YSYTETPK K
Sbjct: 37   DPQSHPALKFSNIPKQ-KLKPVNKTPEN--VKISEDGVSYVIEGAPFEFKYSYTETPKSK 93

Query: 1572 PVKLREPLVSPFGPETMAKPWLGRKPLNPSKRKLPEFDSFKLPPPHKKGVKPVQAPGPYL 1393
            PV++REP   PFGP TM +PW GR PL PSK+KL EFDSF LPPPHKKGVKPVQ+PGP+L
Sbjct: 94   PVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFL 153

Query: 1392 PGSGPKYVRSRDEILGEPLTKEEIEALIEGSRKCSRQLNMGRDGLTHNMLDNIHALWKRR 1213
            PG+ P+YV SR+E+LGEPLTKEEI  L+  + K SRQLN+GRDG  HNMLDNIHA WKRR
Sbjct: 154  PGTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRR 213

Query: 1212 RVCKIKCKGVCTVDMDNVCEQLEEKTGGKIIYCRGGVIYLFRGRNYNHRSRPRYPLMLWK 1033
            RVCKIKC GVCTVDMDNVC+QLEEKTGGK+IY RGGVIYLFRGRNYNH++RPR+PLMLWK
Sbjct: 214  RVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRGRNYNHKTRPRFPLMLWK 273

Query: 1032 PQTPVYPRLVQRVPDGLTLEEASVMRKKGRDLTPICKLAKNGVYIDLVRNVREAFEACEL 853
            P  PVYPRL+Q+VP+GLTLEEA+ MR+KGR LTPICKL KNGVY +LV NVREAFE CEL
Sbjct: 274  PVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNVREAFEECEL 333

Query: 852  VRIDCQGLNPSDYRKIGAKLKDLVPCVLISFEREHILIWRGPHWKSSIEPA--------- 700
            VR++CQGLN SDYRKIGAKL+DLVPC L+S+E EHIL+WRG +WKSS             
Sbjct: 334  VRVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKSSFPDLVEDFKEATK 393

Query: 699  -----KILKPLEEVKTDVA-------PTSILNSEKHDDN----DDGDVLEKTISPTSSNE 568
                 K  K L+    DV+       P   +++  HD +     D   ++K   PT +++
Sbjct: 394  ADADNKNDKTLQSEALDVSTPSLNHNPVEHVSNLSHDTSISFCPDDVTVDKVPCPTKNSK 453

Query: 567  PDISVIDD 544
              +SV+ D
Sbjct: 454  QSMSVVAD 461