BLASTX nr result

ID: Mentha27_contig00001501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00001501
         (365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45373.1| hypothetical protein MIMGU_mgv1a007634mg [Mimulus...    60   4e-07
ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...    59   5e-07
ref|XP_006338710.1| PREDICTED: protein SMG9-like isoform X3 [Sol...    58   1e-06
ref|XP_006338708.1| PREDICTED: protein SMG9-like isoform X1 [Sol...    58   1e-06

>gb|EYU45373.1| hypothetical protein MIMGU_mgv1a007634mg [Mimulus guttatus]
          Length = 401

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   IPDPSSTTLSHPQTSSDKEVANKLVKSGDKYMATPIVVHTRVHDQDNTPWNF 157
           IPDPSS TLS    S  KE  NK ++SGD+Y+A+PI VHTR+ D+D TP NF
Sbjct: 226 IPDPSSATLS--TVSFGKENINKPLESGDEYIASPIFVHTRLRDRDITPCNF 275


>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
 Frame = +2

Query: 2   IPDPSSTTLSHPQTS---SDKEVANKLVKSGDKYMATPIVVHTRVHDQDNTPWNFQVIFT 172
           IPD SS T SH Q S   SDKE  +K+++ G++Y+A PI VHT++ DQD TP NF  +  
Sbjct: 237 IPDLSSLTPSHSQNSNLGSDKEGKDKVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRK 296

Query: 173 ASAE 184
           A A+
Sbjct: 297 ALAQ 300


>ref|XP_006338710.1| PREDICTED: protein SMG9-like isoform X3 [Solanum tuberosum]
          Length = 404

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   IPDPSSTTLSHPQTSSDKEVANKLVKSGDKYMATPIVVHTRVHDQDNTPWN 154
           IPDPSS TLSHPQ SS+KE  ++++ SG +YMA P+ VHT++  +D  P N
Sbjct: 226 IPDPSSLTLSHPQ-SSEKENRDRILDSGGEYMADPVFVHTKLCTEDLAPCN 275


>ref|XP_006338708.1| PREDICTED: protein SMG9-like isoform X1 [Solanum tuberosum]
           gi|565343165|ref|XP_006338709.1| PREDICTED: protein
           SMG9-like isoform X2 [Solanum tuberosum]
          Length = 405

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   IPDPSSTTLSHPQTSSDKEVANKLVKSGDKYMATPIVVHTRVHDQDNTPWN 154
           IPDPSS TLSHPQ SS+KE  ++++ SG +YMA P+ VHT++  +D  P N
Sbjct: 226 IPDPSSLTLSHPQ-SSEKENRDRILDSGGEYMADPVFVHTKLCTEDLAPCN 275


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