BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00000445
         (561 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   264   1e-68
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   259   3e-67
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   256   3e-66
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   255   6e-66
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       254   1e-65
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       254   1e-65
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   253   2e-65
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   253   3e-65
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      249   3e-64
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      249   4e-64
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   248   6e-64
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   246   2e-63
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   246   4e-63
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   245   6e-63
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   245   6e-63
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   245   6e-63
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   244   8e-63
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      244   1e-62
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       243   2e-62
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   243   2e-62

>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  264 bits (674), Expect = 1e-68
 Identities = 126/165 (76%), Positives = 141/165 (85%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQTSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRHMVDC 245
            QVFVQ SG+   GLY+    G++  + G VAVAKNPCLHPGDVRVL AV VPEL+HMVDC
Sbjct: 723  QVFVQFSGTGSSGLYE----GTKYTVTGKVAVAKNPCLHPGDVRVLRAVDVPELQHMVDC 778

Query: 246  VVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEE 425
            VVFP+KG RPHPNECSGSDLDGD YFVCWDPELIPP+Q  P+ Y+PAPNT LDH VT+EE
Sbjct: 779  VVFPRKGRRPHPNECSGSDLDGDRYFVCWDPELIPPNQESPMTYNPAPNTLLDHNVTIEE 838

Query: 426  IEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            +EEYFTNYIVNDSLGII+NAHT FADKER  ALSSPC+ELA+LFS
Sbjct: 839  VEEYFTNYIVNDSLGIIANAHTAFADKERDGALSSPCLELAQLFS 883


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  259 bits (663), Expect = 3e-67
 Identities = 124/170 (72%), Positives = 144/170 (84%), Gaps = 5/170 (2%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT---STGSRQI--IKGNVAVAKNPCLHPGDVRVLTAVYVPELR 230
            QVFV+ SG+ +RGL+D +   ST + +   ++G V VAKNPCLHPGDVRVLTAV VPELR
Sbjct: 717  QVFVRYSGAVKRGLFDDSYDNSTANERFDPVRGKVVVAKNPCLHPGDVRVLTAVDVPELR 776

Query: 231  HMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHE 410
            HMVDCVVFP+ G RPHPNECSGSDLDGDIYFVCWD +LIP  QV P+ Y+PAP T LDH+
Sbjct: 777  HMVDCVVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHD 836

Query: 411  VTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            VT+EE+E+YFTNYIVNDSLGII+NAHTVFADKE  MALS PC+ELA+LFS
Sbjct: 837  VTIEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFS 886


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  256 bits (654), Expect = 3e-66
 Identities = 120/172 (69%), Positives = 141/172 (81%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ +G+ RR  Y+++       ST    I++GNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 719  QVFVQFTGTGRRQFYEESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPA 778

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+L+PP Q  P+ Y PAP+T+LD
Sbjct: 779  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLD 838

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H+VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+LFS
Sbjct: 839  HDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFS 890


>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  255 bits (651), Expect = 6e-66
 Identities = 120/172 (69%), Positives = 141/172 (81%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQ-------TSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ SG+ +R  Y++       TST    I+KG VAVAKNPCLHPGD+RVL A+ VP 
Sbjct: 656  QVFVQFSGAGQRRFYEESIKFDEYTSTDHNYIVKGKVAVAKNPCLHPGDLRVLEAIDVPA 715

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMV+C+VFPQKG RPHPNECSGSDLDGDIY VCWDP+LIPP Q  P+ Y+PAP T LD
Sbjct: 716  LHHMVNCIVFPQKGTRPHPNECSGSDLDGDIYIVCWDPDLIPPKQFDPMDYNPAPATRLD 775

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            HEVT++E++EYFTNYI+N+SLGII+NAHTVFADKE  MALSSPC+ELA+L S
Sbjct: 776  HEVTIQEVQEYFTNYILNESLGIIANAHTVFADKEPSMALSSPCLELAQLHS 827


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  254 bits (649), Expect = 1e-65
 Identities = 121/172 (70%), Positives = 141/172 (81%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT----STGSRQ---IIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ SG+ RR  ++++     +GS     I+KGNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 718  QVFVQFSGAGRRQFFEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPA 777

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV  + Y PAP T+LD
Sbjct: 778  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLD 837

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H+VT+EE+EEYFTNYI+NDSLGII+NAH VFAD+E  MA+S PC +LA+LFS
Sbjct: 838  HDVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFS 889


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  254 bits (648), Expect = 1e-65
 Identities = 118/172 (68%), Positives = 139/172 (80%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66  QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
           QVFVQ +G+  R  Y+++       S     I+KGNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 409 QVFVQFTGAGGRQFYEESHHFNDSGSANYNFILKGNVVVAKNPCLHPGDIRVLKAVDVPA 468

Query: 225 LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
           L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV P+ Y PAP+ +LD
Sbjct: 469 LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLD 528

Query: 405 HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
           H+VT+EE+EEYFTNY+VND LG+I+NAH VFAD+E  MA+S PC+ELA+LFS
Sbjct: 529 HDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFS 580


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  253 bits (647), Expect = 2e-65
 Identities = 122/169 (72%), Positives = 137/169 (81%), Gaps = 4/169 (2%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQ----TSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRH 233
            QVFVQ SG  RR L+D     +S  S  II+G V VAKNPCLHPGDVRVL AV VP+L H
Sbjct: 721  QVFVQFSGKRRRQLFDDICIHSSLDSCFIIEGKVVVAKNPCLHPGDVRVLRAVNVPDLHH 780

Query: 234  MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEV 413
            MVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIPP Q+ P+ Y PAP  E+D +V
Sbjct: 781  MVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDV 840

Query: 414  TVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            T+EE+EEYF NYIVNDSLGII+NAHTVFAD +   A+S PC++LAKLFS
Sbjct: 841  TIEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFS 889


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  253 bits (645), Expect = 3e-65
 Identities = 122/165 (73%), Positives = 134/165 (81%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQTSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRHMVDC 245
            QVFVQVSGS             R I++G V VAKNPCLHPGDVRVLTAV VP+L HMVDC
Sbjct: 723  QVFVQVSGSRSE---------QRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDC 773

Query: 246  VVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEE 425
            VVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP  Q+PP+ Y PAP   L+HEVT+EE
Sbjct: 774  VVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEE 833

Query: 426  IEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            +EEYFTNYIVNDSLGII+NAHTVFAD+E + A+SS C  LAKLFS
Sbjct: 834  VEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFS 878


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  249 bits (636), Expect = 3e-64
 Identities = 121/165 (73%), Positives = 132/165 (80%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQTSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRHMVDC 245
            QVFVQ SGS             R I++G V VAKNPCLHPGDVRVL AV VP+L HMVDC
Sbjct: 723  QVFVQFSGSRSE---------RRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDC 773

Query: 246  VVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEE 425
            VVFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP  Q+ P+ Y PA  T+LDHEVT+EE
Sbjct: 774  VVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEE 833

Query: 426  IEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            IEEYFTNYIVNDSLGIISNAHT FAD+E   A+S PC+ELAKLFS
Sbjct: 834  IEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFS 878


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  249 bits (635), Expect = 4e-64
 Identities = 121/165 (73%), Positives = 132/165 (80%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQTSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRHMVDC 245
            QVFVQ SGS             R I++G V VAKNPCLHPGDVRVL AV VP+L HMVDC
Sbjct: 723  QVFVQFSGSRSE---------RRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDC 773

Query: 246  VVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEE 425
            VVFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP  Q+ P+ Y PA  T+LDHEVT+EE
Sbjct: 774  VVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEE 833

Query: 426  IEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            IEEYFTNYIVNDSLGIISNAHT FAD+E   A+S PC+ELAKLFS
Sbjct: 834  IEEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFS 878


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  248 bits (634), Expect = 6e-64
 Identities = 118/171 (69%), Positives = 135/171 (78%), Gaps = 6/171 (3%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQTSTGSRQ------IIKGNVAVAKNPCLHPGDVRVLTAVYVPEL 227
            QVFV+ SGS  R LYD +   S +      +IKG+V VAKNPCLHPGD+R+L AV VP L
Sbjct: 730  QVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPAL 789

Query: 228  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 407
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP  Q+ P+ Y P P  +LDH
Sbjct: 790  HHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDH 849

Query: 408  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            +VT+EE+EEYFTNYIVNDSLG+I+NAHT  ADKE   A+S PCVELA+ FS
Sbjct: 850  DVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFS 900


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score =  246 bits (629), Expect = 2e-63
 Identities = 114/169 (67%), Positives = 136/169 (80%), Gaps = 4/169 (2%)
 Frame = +3

Query: 66   QVFVQVSGSER----RGLYDQTSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRH 233
            +VFVQ S  ++    R ++ +  +    I+ G V VAKNPCLHPGDVRVLTAV VP L H
Sbjct: 729  EVFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHH 788

Query: 234  MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEV 413
            M+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV P+ Y P P+  LDH+V
Sbjct: 789  MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDV 848

Query: 414  TVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            T+EE++EYF NY+VNDSLGII+NAHT FADKE K A+S+PC++LAKLFS
Sbjct: 849  TMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFS 897


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  246 bits (627), Expect = 4e-63
 Identities = 119/171 (69%), Positives = 138/171 (80%), Gaps = 6/171 (3%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQTSTGS------RQIIKGNVAVAKNPCLHPGDVRVLTAVYVPEL 227
            QVFVQ+SG+  R L+ ++S  S      R I++G V VAKNPCLHPGDVRVL AV VP L
Sbjct: 734  QVFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPAL 793

Query: 228  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 407
             HMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWD ELIPP Q PP+ Y PA + +LDH
Sbjct: 794  HHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDH 853

Query: 408  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            +V +E++EEYFTNYIVNDSLGII+NAHTVFAD+E   A S PC++LA+ FS
Sbjct: 854  DVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFS 904


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  245 bits (625), Expect = 6e-63
 Identities = 118/172 (68%), Positives = 135/172 (78%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ +GS  R   +         ST    I+KGNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 716  QVFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPA 775

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV  + Y PAP+ +LD
Sbjct: 776  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLD 835

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H+VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+LFS
Sbjct: 836  HDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFS 887


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  245 bits (625), Expect = 6e-63
 Identities = 118/172 (68%), Positives = 135/172 (78%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ +G+  R   +         ST    I+KGNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 715  QVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPA 774

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV P+ Y PAP+ +LD
Sbjct: 775  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLD 834

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H+VT+EE+EEYFTNYIVNDSLGIISNAH VFAD+E  MA+S PC +LA+L S
Sbjct: 835  HDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCS 886


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  245 bits (625), Expect = 6e-63
 Identities = 118/172 (68%), Positives = 135/172 (78%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ +G+  R   +         ST    I+KGNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 564  QVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPA 623

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV P+ Y PAP+ +LD
Sbjct: 624  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLD 683

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H+VT+EE+EEYFTNYIVNDSLGIISNAH VFAD+E  MA+S PC +LA+L S
Sbjct: 684  HDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCS 735


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  244 bits (624), Expect = 8e-63
 Identities = 118/172 (68%), Positives = 135/172 (78%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ +G+      D         ST S  I+KGNV VAKNPCLHPGD+RVL AV V  
Sbjct: 716  QVFVQFTGAGHGEFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRA 775

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV P+ Y PAP+ +LD
Sbjct: 776  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLD 835

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H+VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+LFS
Sbjct: 836  HDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFS 887


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  244 bits (622), Expect = 1e-62
 Identities = 113/169 (66%), Positives = 135/169 (79%), Gaps = 4/169 (2%)
 Frame = +3

Query: 66   QVFVQVSGSER----RGLYDQTSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPELRH 233
            +VF Q S  ++    R ++ +  +    I+ G V VAKNPCLHPGDVRVLTAV VP L H
Sbjct: 729  EVFWQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHH 788

Query: 234  MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEV 413
            M+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV P+ Y P P+  LDH+V
Sbjct: 789  MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDV 848

Query: 414  TVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            T+EE++EYF NY+VNDSLGII+NAHT FADKE K A+S+PC++LAKLFS
Sbjct: 849  TMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFS 897


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  243 bits (620), Expect = 2e-62
 Identities = 116/171 (67%), Positives = 130/171 (76%), Gaps = 6/171 (3%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQ------TSTGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPEL 227
            +VFVQ SG   R  ++       T +G   I+ G V VAKNPCLHPGDVRVL AV VP L
Sbjct: 731  EVFVQFSGITHRPFFEDSFMLGGTGSGQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPAL 790

Query: 228  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 407
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP  Q  P+ Y PAP T LDH
Sbjct: 791  HHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDH 850

Query: 408  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            +V +EE++EYFTNYIVNDSLGII+NAHT FADKE   A+S  C+ELA+LFS
Sbjct: 851  DVRIEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFS 901


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  243 bits (620), Expect = 2e-62
 Identities = 117/172 (68%), Positives = 134/172 (77%), Gaps = 7/172 (4%)
 Frame = +3

Query: 66   QVFVQVSGSERRGLYDQT-------STGSRQIIKGNVAVAKNPCLHPGDVRVLTAVYVPE 224
            QVFVQ +G+  R   +         ST    I+KGNV VAKNPCLHPGD+RVL AV VP 
Sbjct: 716  QVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPA 775

Query: 225  LRHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELD 404
            L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV  + Y PAP+ +LD
Sbjct: 776  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLD 835

Query: 405  HEVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERKMALSSPCVELAKLFS 560
            H VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+LFS
Sbjct: 836  HNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFS 887