BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00000444
         (560 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   307   1e-81
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   295   7e-78
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   293   3e-77
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   289   3e-76
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       289   4e-76
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       289   4e-76
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   285   6e-75
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   283   2e-74
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   282   4e-74
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   281   6e-74
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      280   2e-73
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      280   2e-73
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      280   2e-73
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   280   2e-73
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   279   3e-73
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   277   1e-72
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   277   1e-72
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   276   3e-72
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   275   4e-72
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   275   4e-72

>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  307 bits (786), Expect = 1e-81
 Identities = 146/186 (78%), Positives = 162/186 (87%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALRHMVDCV 182
            VFVQ SGT   GLY+    G++  +T  VAVAKNPCLHPGDVRVL AVDVP L+HMVDCV
Sbjct: 724  VFVQFSGTGSSGLYE----GTKYTVTGKVAVAKNPCLHPGDVRVLRAVDVPELQHMVDCV 779

Query: 183  VFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEEI 362
            VFP+KG RPHPNECSGSDLDGD YFVCWDPELIPP+Q  P+ Y+PAPNT LDH VT+EE+
Sbjct: 780  VFPRKGRRPHPNECSGSDLDGDRYFVCWDPELIPPNQESPMTYNPAPNTLLDHNVTIEEV 839

Query: 363  EEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPAEIPP 542
            EEYFTNYIVNDSLGII+NAHT FADKER  ALSSPC+ELA+LFS+AVDFPKTG+PAEIPP
Sbjct: 840  EEYFTNYIVNDSLGIIANAHTAFADKERDGALSSPCLELAQLFSVAVDFPKTGIPAEIPP 899

Query: 543  HLRVKE 560
            HLRVKE
Sbjct: 900  HLRVKE 905


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  295 bits (754), Expect = 7e-78
 Identities = 141/191 (73%), Positives = 159/191 (83%), Gaps = 5/191 (2%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSR-----NIITRNVAVAKNPCLHPGDVRVLTAVDVPALRH 167
            VFV+ SG  +RGL+D +   S      + +   V VAKNPCLHPGDVRVLTAVDVP LRH
Sbjct: 718  VFVRYSGAVKRGLFDDSYDNSTANERFDPVRGKVVVAKNPCLHPGDVRVLTAVDVPELRH 777

Query: 168  MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEV 347
            MVDCVVFP+ G RPHPNECSGSDLDGDIYFVCWD +LIP  QV P+ Y+PAP T LDH+V
Sbjct: 778  MVDCVVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDV 837

Query: 348  TVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVP 527
            T+EE+E+YFTNYIVNDSLGII+NAHTVFADKE  MALS PC+ELA+LFSIAVDF KTG+P
Sbjct: 838  TIEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIP 897

Query: 528  AEIPPHLRVKE 560
            AEIPPHLRVKE
Sbjct: 898  AEIPPHLRVKE 908


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  293 bits (749), Expect = 3e-77
 Identities = 141/193 (73%), Positives = 161/193 (83%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTL----TGSRN---IITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ +GT RR  Y+++     +GS N   I+  NV VAKNPCLHPGD+RVL AVDVPAL
Sbjct: 720  VFVQFTGTGRRQFYEESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPAL 779

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+L+PP Q  P+ Y PAP+T+LDH
Sbjct: 780  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDH 839

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+LFSIAVDFPKTG
Sbjct: 840  DVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTG 899

Query: 522  VPAEIPPHLRVKE 560
            VPAEIP  LR KE
Sbjct: 900  VPAEIPSQLRPKE 912


>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  289 bits (740), Expect = 3e-76
 Identities = 136/193 (70%), Positives = 160/193 (82%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTL-------TGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ SG  +R  Y++++       T    I+   VAVAKNPCLHPGD+RVL A+DVPAL
Sbjct: 657  VFVQFSGAGQRRFYEESIKFDEYTSTDHNYIVKGKVAVAKNPCLHPGDLRVLEAIDVPAL 716

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMV+C+VFPQKG RPHPNECSGSDLDGDIY VCWDP+LIPP Q  P+ Y+PAP T LDH
Sbjct: 717  HHMVNCIVFPQKGTRPHPNECSGSDLDGDIYIVCWDPDLIPPKQFDPMDYNPAPATRLDH 776

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            EVT++E++EYFTNYI+N+SLGII+NAHTVFADKE  MALSSPC+ELA+L S+AVDFPKTG
Sbjct: 777  EVTIQEVQEYFTNYILNESLGIIANAHTVFADKEPSMALSSPCLELAQLHSVAVDFPKTG 836

Query: 522  VPAEIPPHLRVKE 560
            VPA+IPP LRVKE
Sbjct: 837  VPAQIPPKLRVKE 849


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  289 bits (739), Expect = 4e-76
 Identities = 140/193 (72%), Positives = 159/193 (82%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTL----TGSRN---IITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ SG  RR  ++++     +GS N   I+  NV VAKNPCLHPGD+RVL AVDVPAL
Sbjct: 719  VFVQFSGAGRRQFFEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPAL 778

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV  + Y PAP T+LDH
Sbjct: 779  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDH 838

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +VT+EE+EEYFTNYI+NDSLGII+NAH VFAD+E  MA+S PC +LA+LFSIAVDFPKTG
Sbjct: 839  DVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTG 898

Query: 522  VPAEIPPHLRVKE 560
            VPAEIP  LR KE
Sbjct: 899  VPAEIPSQLRPKE 911


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  289 bits (739), Expect = 4e-76
 Identities = 138/193 (71%), Positives = 159/193 (82%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3   VFVQVSGTERRGLYDQTL----TGSRN---IITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
           VFVQ +G   R  Y+++     +GS N   I+  NV VAKNPCLHPGD+RVL AVDVPAL
Sbjct: 410 VFVQFTGAGGRQFYEESHHFNDSGSANYNFILKGNVVVAKNPCLHPGDIRVLKAVDVPAL 469

Query: 162 RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
            HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV P+ Y PAP+ +LDH
Sbjct: 470 HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDH 529

Query: 342 EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
           +VT+EE+EEYFTNY+VND LG+I+NAH VFAD+E  MA+S PC+ELA+LFSIAVDFPKTG
Sbjct: 530 DVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTG 589

Query: 522 VPAEIPPHLRVKE 560
           VPAEIP  LR KE
Sbjct: 590 VPAEIPSQLRPKE 602


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  285 bits (729), Expect = 6e-75
 Identities = 140/186 (75%), Positives = 151/186 (81%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALRHMVDCV 182
            VFVQVSG+             R I+   V VAKNPCLHPGDVRVLTAV+VP L HMVDCV
Sbjct: 724  VFVQVSGSRSE---------QRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCV 774

Query: 183  VFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEEI 362
            VFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP  Q+PP+ Y PAP   L+HEVT+EE+
Sbjct: 775  VFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEV 834

Query: 363  EEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPAEIPP 542
            EEYFTNYIVNDSLGII+NAHTVFAD+E R A+SS C  LAKLFSIAVDFPKTGVPAEIP 
Sbjct: 835  EEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQ 894

Query: 543  HLRVKE 560
             LRVKE
Sbjct: 895  ELRVKE 900


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  283 bits (724), Expect = 2e-74
 Identities = 137/192 (71%), Positives = 155/192 (80%), Gaps = 6/192 (3%)
 Frame = +3

Query: 3    VFVQVSGTERR------GLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALR 164
            VFVQ+SG   R       L+  + +  R I+   V VAKNPCLHPGDVRVL AV+VPAL 
Sbjct: 735  VFVQISGAGYRQLHGESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALH 794

Query: 165  HMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHE 344
            HMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWD ELIPP Q PP+ Y PA + +LDH+
Sbjct: 795  HMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHD 854

Query: 345  VTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGV 524
            V +E++EEYFTNYIVNDSLGII+NAHTVFAD+E   A S PC++LA+ FSIAVDFPKTGV
Sbjct: 855  VQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGV 914

Query: 525  PAEIPPHLRVKE 560
            PAEIPPHL VKE
Sbjct: 915  PAEIPPHLYVKE 926


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score =  282 bits (722), Expect = 4e-74
 Identities = 133/190 (70%), Positives = 157/190 (82%), Gaps = 4/190 (2%)
 Frame = +3

Query: 3    VFVQVSGTER----RGLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALRHM 170
            VFVQ S  ++    R ++ +  +    I+T  V VAKNPCLHPGDVRVLTAVDVP+L HM
Sbjct: 730  VFVQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHM 789

Query: 171  VDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVT 350
            +DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV P+ Y P P+  LDH+VT
Sbjct: 790  IDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVT 849

Query: 351  VEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPA 530
            +EE++EYF NY+VNDSLGII+NAHT FADKE + A+S+PC++LAKLFSIAVDFPKTGVPA
Sbjct: 850  MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPA 909

Query: 531  EIPPHLRVKE 560
             IP +LRVKE
Sbjct: 910  LIPANLRVKE 919


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  281 bits (720), Expect = 6e-74
 Identities = 138/190 (72%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSRN----IITRNVAVAKNPCLHPGDVRVLTAVDVPALRHM 170
            VFVQ SG  RR L+D     S      II   V VAKNPCLHPGDVRVL AV+VP L HM
Sbjct: 722  VFVQFSGKRRRQLFDDICIHSSLDSCFIIEGKVVVAKNPCLHPGDVRVLRAVNVPDLHHM 781

Query: 171  VDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVT 350
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIPP Q+ P+ Y PAP  E+D +VT
Sbjct: 782  VDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVT 841

Query: 351  VEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPA 530
            +EE+EEYF NYIVNDSLGII+NAHTVFAD +   A+S PC++LAKLFSIAVDFPKTGVPA
Sbjct: 842  IEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPA 901

Query: 531  EIPPHLRVKE 560
            EIPP L  KE
Sbjct: 902  EIPPELYAKE 911


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  280 bits (716), Expect = 2e-73
 Identities = 138/186 (74%), Positives = 149/186 (80%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALRHMVDCV 182
            VFVQ SG+             R I+   V VAKNPCLHPGDVRVL AV+VP L HMVDCV
Sbjct: 724  VFVQFSGSRSE---------RRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 774

Query: 183  VFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEEI 362
            VFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP  Q+ P+ Y PA  T+LDHEVT+EEI
Sbjct: 775  VFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEI 834

Query: 363  EEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPAEIPP 542
            EEYFTNYIVNDSLGIISNAHT FAD+E   A+S PC+ELAKLFSIAVDFPKTGVPAEIP 
Sbjct: 835  EEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQ 894

Query: 543  HLRVKE 560
             LRVKE
Sbjct: 895  ELRVKE 900


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  280 bits (716), Expect = 2e-73
 Identities = 138/186 (74%), Positives = 149/186 (80%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALRHMVDCV 182
            VFVQ SG+             R I+   V VAKNPCLHPGDVRVL AV+VP L HMVDCV
Sbjct: 724  VFVQFSGSRSE---------RRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 774

Query: 183  VFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVTVEEI 362
            VFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP  Q+ P+ Y PA  T+LDHEVT+EEI
Sbjct: 775  VFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEI 834

Query: 363  EEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPAEIPP 542
            EEYFTNYIVNDSLGIISNAHT FAD+E   A+S PC+ELAKLFSIAVDFPKTGVPAEIP 
Sbjct: 835  EEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQ 894

Query: 543  HLRVKE 560
             LRVKE
Sbjct: 895  ELRVKE 900


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  280 bits (715), Expect = 2e-73
 Identities = 132/190 (69%), Positives = 156/190 (82%), Gaps = 4/190 (2%)
 Frame = +3

Query: 3    VFVQVSGTER----RGLYDQTLTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPALRHM 170
            VF Q S  ++    R ++ +  +    I+T  V VAKNPCLHPGDVRVLTAVDVP+L HM
Sbjct: 730  VFWQCSAHQQLHDDRVIFKRIKSNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHM 789

Query: 171  VDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHEVT 350
            +DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPP QV P+ Y P P+  LDH+VT
Sbjct: 790  IDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVT 849

Query: 351  VEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGVPA 530
            +EE++EYF NY+VNDSLGII+NAHT FADKE + A+S+PC++LAKLFSIAVDFPKTGVPA
Sbjct: 850  MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPA 909

Query: 531  EIPPHLRVKE 560
             IP +LRVKE
Sbjct: 910  LIPANLRVKE 919


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  280 bits (715), Expect = 2e-73
 Identities = 134/192 (69%), Positives = 153/192 (79%), Gaps = 6/192 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTLTGSRN------IITRNVAVAKNPCLHPGDVRVLTAVDVPALR 164
            VFV+ SG+  R LYD +   S        +I  +V VAKNPCLHPGD+R+L AVDVPAL 
Sbjct: 731  VFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALH 790

Query: 165  HMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDHE 344
            HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP  Q+ P+ Y P P  +LDH+
Sbjct: 791  HMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHD 850

Query: 345  VTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTGV 524
            VT+EE+EEYFTNYIVNDSLG+I+NAHT  ADKE   A+S PCVELA+ FSIAVDFPKTGV
Sbjct: 851  VTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGV 910

Query: 525  PAEIPPHLRVKE 560
            PAEIP +LR +E
Sbjct: 911  PAEIPSNLRARE 922


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  279 bits (714), Expect = 3e-73
 Identities = 138/193 (71%), Positives = 154/193 (79%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTL----TGSRN---IITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ+SGT  R  +  +L    +GS +   I+   + VAKNPCLHPGDVRVL AV+VP L
Sbjct: 720  VFVQISGTGGRQSFGDSLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTL 779

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +LIPP Q+ P+ Y PAP   LDH
Sbjct: 780  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDH 839

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +V +EE+EEYFTNYIVNDSLGII+NAHTVFADKE   A   PC ELAKLFSIAVDFPKTG
Sbjct: 840  DVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTG 899

Query: 522  VPAEIPPHLRVKE 560
            VPAEIP +LRVKE
Sbjct: 900  VPAEIPRNLRVKE 912


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  277 bits (709), Expect = 1e-72
 Identities = 137/193 (70%), Positives = 155/193 (80%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQTL----TGSRN---IITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ+SGT  R  +  +L    +GS +   I+   V VAKNPCLHPGDVR+L+AVDVPAL
Sbjct: 718  VFVQISGTGGRQSFGDSLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPAL 777

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKGMRPHP+ECSGSDLDGDIYFVCWD +LIPP Q+ P+ Y PAP   LDH
Sbjct: 778  HHMVDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDH 837

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +V +EE+EEYFTNYI ND LGII+NAHTVFADKE   AL  PC ELAKLFSIA++FPKTG
Sbjct: 838  DVMIEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTG 897

Query: 522  VPAEIPPHLRVKE 560
            VPAEIP HL VKE
Sbjct: 898  VPAEIPFHLHVKE 910


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  277 bits (709), Expect = 1e-72
 Identities = 137/193 (70%), Positives = 155/193 (80%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3   VFVQVSGTERRGLYDQTL----TGSRN---IITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
           VFVQ+SGT  R  +  +L    +GS +   I+   V VAKNPCLHPGDVR+L+AVDVPAL
Sbjct: 262 VFVQISGTGGRQSFGDSLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPAL 321

Query: 162 RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
            HMVDCVVFPQKGMRPHP+ECSGSDLDGDIYFVCWD +LIPP Q+ P+ Y PAP   LDH
Sbjct: 322 HHMVDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDH 381

Query: 342 EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
           +V +EE+EEYFTNYI ND LGII+NAHTVFADKE   AL  PC ELAKLFSIA++FPKTG
Sbjct: 382 DVMIEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTG 441

Query: 522 VPAEIPPHLRVKE 560
           VPAEIP HL VKE
Sbjct: 442 VPAEIPFHLHVKE 454


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  276 bits (706), Expect = 3e-72
 Identities = 135/193 (69%), Positives = 151/193 (78%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQT-------LTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ +G   R   +          T    I+  NV VAKNPCLHPGD+RVL AVDVPAL
Sbjct: 565  VFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPAL 624

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV P+ Y PAP+ +LDH
Sbjct: 625  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDH 684

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +VT+EE+EEYFTNYIVNDSLGIISNAH VFAD+E  MA+S PC +LA+L SIAVDFPKTG
Sbjct: 685  DVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTG 744

Query: 522  VPAEIPPHLRVKE 560
            VPAEIP  LR KE
Sbjct: 745  VPAEIPSQLRPKE 757


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  275 bits (704), Expect = 4e-72
 Identities = 134/193 (69%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQT-------LTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ +G+  R   +          T    I+  NV VAKNPCLHPGD+RVL AVDVPAL
Sbjct: 717  VFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPAL 776

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV  + Y PAP+ +LDH
Sbjct: 777  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDH 836

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+L SIAVDFPKTG
Sbjct: 837  DVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTG 896

Query: 522  VPAEIPPHLRVKE 560
            VPAEIPP LR KE
Sbjct: 897  VPAEIPPQLRPKE 909


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  275 bits (704), Expect = 4e-72
 Identities = 134/193 (69%), Positives = 152/193 (78%), Gaps = 7/193 (3%)
 Frame = +3

Query: 3    VFVQVSGTERRGLYDQT-------LTGSRNIITRNVAVAKNPCLHPGDVRVLTAVDVPAL 161
            VFVQ +G+  R   +          T    I+  NV VAKNPCLHPGD+RVL AVDVPAL
Sbjct: 717  VFVQFTGSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPAL 776

Query: 162  RHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDPELIPPDQVPPICYDPAPNTELDH 341
             HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPP QV  + Y PAP+ +LDH
Sbjct: 777  HHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDH 836

Query: 342  EVTVEEIEEYFTNYIVNDSLGIISNAHTVFADKERRMALSSPCVELAKLFSIAVDFPKTG 521
            +VT+EE+EEYFTNYIVNDSLGII+NAH VFAD+E  MA+S PC +LA+LFSIAVDFPKTG
Sbjct: 837  DVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTG 896

Query: 522  VPAEIPPHLRVKE 560
            VPAEIP  LR KE
Sbjct: 897  VPAEIPSQLRPKE 909