BLASTX nr result
ID: Mentha27_contig00000356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00000356
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus... 132 4e-29
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 119 4e-25
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 119 4e-25
ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis... 118 1e-24
dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana] 118 1e-24
dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana] 118 1e-24
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps... 118 1e-24
ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidop... 118 1e-24
ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arab... 118 1e-24
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 117 1e-24
gb|ABK25016.1| unknown [Picea sitchensis] 117 1e-24
gb|ABK24573.1| unknown [Picea sitchensis] 117 1e-24
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 117 1e-24
ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobr... 116 4e-24
ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobr... 116 4e-24
ref|XP_006403686.1| hypothetical protein EUTSA_v10010545mg [Eutr... 115 5e-24
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 115 5e-24
ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 115 6e-24
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 115 6e-24
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 114 1e-23
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus]
Length = 309
Score = 132 bits (333), Expect = 4e-29
Identities = 63/87 (72%), Positives = 74/87 (85%)
Frame = -2
Query: 272 RASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSA 93
R S GNTN++YVGNLSWGVDN ALE++FSE G VQEARVVYDR++GRS+GFGFVT SS
Sbjct: 220 RTSSGNTNRVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPE 279
Query: 92 EVDKACEKLDGTNLDGRPIRVNPAEDR 12
EV+ A E LDG +LDGR IRV+PAE+R
Sbjct: 280 EVNSAIEALDGADLDGRSIRVSPAEER 306
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
E SF K++VGNL + VD+ AL +F + GNV+ V+YD+ +GRS+GFGFVT+SS
Sbjct: 121 EEQSFSPDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSL 180
Query: 95 AEVDKACEKLDGTNLDGRPIRVN 27
AE + A ++ +G L GR +RVN
Sbjct: 181 AEAEAAAQQFNGYELQGRALRVN 203
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 119 bits (298), Expect = 4e-25
Identities = 55/85 (64%), Positives = 72/85 (84%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
SF ++N++YVGNL+WGVD +ALE++FSE G V +A+VVYDRD+GRS+GFGFVT SS+ EV
Sbjct: 183 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 242
Query: 86 DKACEKLDGTNLDGRPIRVNPAEDR 12
+ A E LDG +L+GR IRV+PAE R
Sbjct: 243 NNAIESLDGVDLNGRAIRVSPAEAR 267
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
E +F KI+VGNL + D+ AL +F GNV+ V+YD+ GRS+GFGFVT+SS
Sbjct: 79 EERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138
Query: 95 AEVDKACEKLDGTNLDGRPIRVN--PAEDRR*N 3
EV+ AC++ +G LDGR +RVN P ++R N
Sbjct: 139 EEVEAACQQFNGYELDGRALRVNSGPPPEKREN 171
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 119 bits (298), Expect = 4e-25
Identities = 55/85 (64%), Positives = 72/85 (84%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
SF ++N++YVGNL+WGVD +ALE++FSE G V +A+VVYDRD+GRS+GFGFVT SS+ EV
Sbjct: 189 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 248
Query: 86 DKACEKLDGTNLDGRPIRVNPAEDR 12
+ A E LDG +L+GR IRV+PAE R
Sbjct: 249 NNAIESLDGVDLNGRAIRVSPAEAR 273
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
E +F KI+VGNL + D+ AL +F GNV+ V+YD+ GRS+GFGFVT+SS
Sbjct: 79 EERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138
Query: 95 AEVDKACEKLDGTNLDGRPIRVN--PAEDRR*N 3
EV+ AC++ +G LDGR +RVN P ++R N
Sbjct: 139 EEVEAACQQFNGYELDGRALRVNSGPPPEKREN 171
>ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa
ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160
[Arabidopsis thaliana] gi|18655393|gb|AAL76152.1|
AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29
protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 342
Score = 118 bits (295), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALE++F+E G V EARV+YDRD+GRSKGFGFVTLSSS EV K
Sbjct: 254 GSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 313
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 314 AINSLNGADLDGRQIRVSEAEAR 336
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
ER SF K++VGNLS+ VD+ L +F GNV+ V+YD+ GRS+GFGFVT+S++
Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 150
Query: 95 AEVDKACEKLDGTNLDGRPIRVN 27
AEV+ A ++ +G +GRP+RVN
Sbjct: 151 AEVEAAAQQFNGYEFEGRPLRVN 173
>dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 118 bits (295), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALE++F+E G V EARV+YDRD+GRSKGFGFVTLSSS EV K
Sbjct: 238 GSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 297
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 298 AINSLNGADLDGRQIRVSEAEAR 320
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
ER SF K++VGNLS+ VD+ L +F GNV+ V+YD+ GRS+GFGFVT+S++
Sbjct: 83 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 142
Query: 95 AEVDKACEKLDGTNLDGRPIRVN 27
AEV+ A ++ +G +GRP+RVN
Sbjct: 143 AEVEAAAQQFNGYEFEGRPLRVN 165
>dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 118 bits (295), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALE++F+E G V EARV+YDRD+GRSKGFGFVTLSSS EV K
Sbjct: 246 GSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 305
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 306 AINSLNGADLDGRQIRVSEAEAR 328
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
ER SF K++VGNLS+ VD+ L +F GNV+ V+YD+ GRS+GFGFVT+S++
Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 150
Query: 95 AEVDKACEKLDGTNLDGRPIRVN 27
AEV+ A ++ +G +GRP+RVN
Sbjct: 151 AEVEAAAQQFNGYEFEGRPLRVN 173
>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
gi|482560193|gb|EOA24384.1| hypothetical protein
CARUB_v10017634mg [Capsella rubella]
Length = 327
Score = 118 bits (295), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALE++F+E G V EARV+YDRD+GRSKGFGFVTLSSS EV K
Sbjct: 239 GSGNRLYVGNLSWGVDDMALENMFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 298
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 299 AINSLNGADLDGRQIRVSEAEAR 321
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
ER SF K++VGNLS+ VD+ L +F GNV+ V+YD+ GRS+GFGFVT+S++
Sbjct: 85 ERTSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 144
Query: 95 AEVDKACEKLDGTNLDGRPIRVN 27
AEV+ A ++ +G +GRP+RVN
Sbjct: 145 AEVEAAAQQFNGYEYEGRPLRVN 167
>ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding
protein 29 [Arabidopsis thaliana]
Length = 363
Score = 118 bits (295), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALE++F+E G V EARV+YDRD+GRSKGFGFVTLSSS EV K
Sbjct: 275 GSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 334
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 335 AINSLNGADLDGRQIRVSEAEAR 357
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 21/104 (20%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
ER SF K++VGNLS+ VD+ L +F GNV+ V+YD+ GRS+GFGFVT+S++
Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 150
Query: 95 AEVDKACEK---------------------LDGTNLDGRPIRVN 27
AEV+ A ++ L G +GRP+RVN
Sbjct: 151 AEVEAAAQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVN 194
>ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata] gi|297323759|gb|EFH54180.1| hypothetical protein
ARALYDRAFT_348440 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 118 bits (295), Expect = 1e-24
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALE++F+E G V EARV+YDRD+GRSKGFGFVTLSSS EV K
Sbjct: 251 GSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQK 310
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 311 AINSLNGADLDGRQIRVSEAEAR 333
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
ER SF K++VGNLS+ VD+ L +F GNV+ V+YD+ GRS+GFGFVT+S++
Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 150
Query: 95 AEVDKACEKLDGTNLDGRPIRVN 27
AEV+ A ++ +G +GRP+RVN
Sbjct: 151 AEVEAAAQQFNGYEFEGRPLRVN 173
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 117 bits (294), Expect = 1e-24
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALES+FSE G V EARV+YDRD+GRSKGFGFVT SS EV
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A + LDG +LDGR IRV+ AE R
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEAR 283
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
SF K++VGNL + VD+ L +F GNV+ V+YD+ GRS+GFGFVT+SS +EV
Sbjct: 86 SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145
Query: 86 DKACEKLDGTNLDGRPIRVN 27
+ A ++ +G LDGRP+RVN
Sbjct: 146 EAAAQQFNGYELDGRPLRVN 165
>gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 117 bits (294), Expect = 1e-24
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = -2
Query: 257 NTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDKA 78
+TNKIYVGNL W D+ +L +FSEHG V EARVVYDR+ GRS+GFGFVT SS +EV+ A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 77 CEKLDGTNLDGRPIRVNPAEDRR 9
LDGT++DGRP+RVN AEDRR
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRR 287
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = -2
Query: 248 KIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDKACEK 69
K++VGNL + +DN+ L +F G V + ++ DR+ G S+GFGFVT+ + E +K E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 68 LDGTNLDGRPIRVNPAEDR 12
+ +L+GR + VN A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 117 bits (294), Expect = 1e-24
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = -2
Query: 257 NTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDKA 78
+TNKIYVGNL W D+ +L +FSEHG V EARVVYDR+ GRS+GFGFVT SS +EV+ A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 77 CEKLDGTNLDGRPIRVNPAEDRR 9
LDGT++DGRP+RVN AEDRR
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRR 287
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = -2
Query: 248 KIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDKACEK 69
K++VGNL + +DN+ L +F G V + ++ DR+ G S+GFGFVT+ + E +K E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 68 LDGTNLDGRPIRVNPAEDR 12
+ +L+GR + VN A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 117 bits (294), Expect = 1e-24
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+ N++YVGNLSWGVD+ ALES+FSE G V EARV+YDRD+GRSKGFGFVT SS EV
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A + LDG +LDGR IRV+ AE R
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEAR 283
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
SF K++VGNL + VD+ L +F GNV+ V+YD+ GRS+GFGFVT+SS +EV
Sbjct: 86 SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145
Query: 86 DKACEKLDGTNLDGRPIRVN 27
+ A ++ +G LDGRP+RVN
Sbjct: 146 EAAAQQFNGYELDGRPLRVN 165
>ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508715952|gb|EOY07849.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 157
Score = 116 bits (290), Expect = 4e-24
Identities = 54/85 (63%), Positives = 71/85 (83%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
+ G +N++YVGNLSWGVD+ ALE++FSE G V EA+VVYDR++GRS+GFGFVT +S+ EV
Sbjct: 68 ALGASNRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEV 127
Query: 86 DKACEKLDGTNLDGRPIRVNPAEDR 12
D A + L+G +LDGRPIRV+ AE R
Sbjct: 128 DSAIKSLNGVDLDGRPIRVSVAESR 152
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Frame = -2
Query: 158 VVYDRDNGRSKGFGFVTLSSSAEVDKACEKLDGTNLDGRPIRVN--PAEDRR 9
V+YD+ GRS+GFGFVT+S++ EV+ A ++ +G L+GR +RVN P RR
Sbjct: 4 VIYDKVTGRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRR 55
>ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508715951|gb|EOY07848.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 254
Score = 116 bits (290), Expect = 4e-24
Identities = 54/85 (63%), Positives = 71/85 (83%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
+ G +N++YVGNLSWGVD+ ALE++FSE G V EA+VVYDR++GRS+GFGFVT +S+ EV
Sbjct: 165 ALGASNRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEV 224
Query: 86 DKACEKLDGTNLDGRPIRVNPAEDR 12
D A + L+G +LDGRPIRV+ AE R
Sbjct: 225 DSAIKSLNGVDLDGRPIRVSVAESR 249
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -2
Query: 194 VFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDKACEKLDGTNLDGRPIRVN--PA 21
V GNV+ V+YD+ GRS+GFGFVT+S++ EV+ A ++ +G L+GR +RVN P
Sbjct: 89 VVESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPP 148
Query: 20 EDRR 9
RR
Sbjct: 149 PPRR 152
>ref|XP_006403686.1| hypothetical protein EUTSA_v10010545mg [Eutrema salsugineum]
gi|557104805|gb|ESQ45139.1| hypothetical protein
EUTSA_v10010545mg [Eutrema salsugineum]
Length = 324
Score = 115 bits (289), Expect = 5e-24
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = -2
Query: 260 GNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEVDK 81
G+++++YVGNLSWGVD+ ALES+FSE G V EARV+YDRD GRSKGFGFVTL S EV K
Sbjct: 236 GSSDRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDTGRSKGFGFVTLGSPQEVTK 295
Query: 80 ACEKLDGTNLDGRPIRVNPAEDR 12
A L+G +LDGR IRV+ AE R
Sbjct: 296 AINSLNGADLDGRQIRVSEAEAR 318
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = -2
Query: 272 RASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSA 93
R+SF N K++VGNLS+ VD+ L +F GNV+ V+YD++ GRS+GFGFVT+SS+A
Sbjct: 93 RSSFSNDLKLFVGNLSFSVDSAKLAQLFESAGNVEMVEVIYDKETGRSRGFGFVTMSSAA 152
Query: 92 EVDKACEKLDGTNLDGRPIRVN 27
EV+ A ++ +G +GRP+RVN
Sbjct: 153 EVEAAAQQFNGYEFEGRPLRVN 174
>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
gi|548849631|gb|ERN08390.1| hypothetical protein
AMTR_s00148p00072380 [Amborella trichopoda]
Length = 272
Score = 115 bits (289), Expect = 5e-24
Identities = 54/83 (65%), Positives = 68/83 (81%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
SF + N++YVGNLSWGVD+ ALE++FSE G V EA+VVYDR++GRS+GFGFVT S++ EV
Sbjct: 183 SFDSPNRVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSTAEEV 242
Query: 86 DKACEKLDGTNLDGRPIRVNPAE 18
A L+G +LDGRPIRV PAE
Sbjct: 243 TSAISTLNGADLDGRPIRVTPAE 265
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
E A+F K++VGNL + VD+ L +F + GNV+ V+YD+ GRS+GFGFVT+S+
Sbjct: 76 EEANFSADLKLFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMSTV 135
Query: 95 AEVDKACEKLDGTNLDGRPIRVN----PAED 15
EV+ A ++ +G + +GR +RVN PA D
Sbjct: 136 EEVEAAVQQFNGHDFEGRQLRVNSGPPPARD 166
>ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 115 bits (288), Expect = 6e-24
Identities = 55/86 (63%), Positives = 70/86 (81%)
Frame = -2
Query: 269 ASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAE 90
A+ +TN+IYVGNLSWGVD+ ALE++FSE G V EARV+YDR+ GRS+GFGFVT +S+ E
Sbjct: 164 ANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEE 223
Query: 89 VDKACEKLDGTNLDGRPIRVNPAEDR 12
V++A E LDG +L+GR IRV AE R
Sbjct: 224 VNRAIESLDGVDLNGRSIRVTMAEAR 249
>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 115 bits (288), Expect = 6e-24
Identities = 55/86 (63%), Positives = 70/86 (81%)
Frame = -2
Query: 269 ASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAE 90
A+ +TN+IYVGNLSWGVD+ ALE++FSE G V EARV+YDR+ GRS+GFGFVT +S+ E
Sbjct: 198 ANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEE 257
Query: 89 VDKACEKLDGTNLDGRPIRVNPAEDR 12
V++A E LDG +L+GR IRV AE R
Sbjct: 258 VNRAIESLDGVDLNGRSIRVTMAEAR 283
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
SF K++VGNL + VD+ L +F + GNV+ V+YD+ GRS+GFGFVT+S+ EV
Sbjct: 85 SFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEV 144
Query: 86 DKACEKLDGTNLDGRPIRVN--PAEDRR*N 3
+ A ++ +G L+GR +RVN P RR N
Sbjct: 145 EAAAQQFNGYELEGRQLRVNSGPPPARREN 174
>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 114 bits (286), Expect = 1e-23
Identities = 54/85 (63%), Positives = 71/85 (83%)
Frame = -2
Query: 266 SFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSSAEV 87
S ++N++YVGNLSWGVD+ AL+ +FSE GNV +A+VVYDRD+GRS+GFGFVT SSS EV
Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261
Query: 86 DKACEKLDGTNLDGRPIRVNPAEDR 12
+ A + L+G +LDGR IRV+ AE+R
Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEER 286
Score = 84.3 bits (207), Expect = 2e-14
Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = -2
Query: 275 ERASFGNTNKIYVGNLSWGVDNEALESVFSEHGNVQEARVVYDRDNGRSKGFGFVTLSSS 96
E+ F K++VGNL + VD+ AL +F GNV+ V+YD+ GRS+GFGFVT+S+
Sbjct: 79 EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTK 138
Query: 95 AEVDKACEKLDGTNLDGRPIRVN--PAEDRR*N 3
EV+ A ++ +G +DGR IRVN PA +R N
Sbjct: 139 EEVEAAEQQFNGYEIDGRAIRVNAGPAPAKREN 171