BLASTX nr result
ID: Mentha27_contig00000022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00000022
(386 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus... 140 2e-31
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 130 2e-28
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 130 2e-28
gb|EMT07115.1| 29 kDa ribonucleoprotein B, chloroplastic [Aegilo... 127 1e-27
gb|EMS60358.1| 31 kDa ribonucleoprotein, chloroplastic [Triticum... 127 1e-27
dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgar... 127 1e-27
dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare] 127 1e-27
ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 125 5e-27
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 123 2e-26
gb|ABK25016.1| unknown [Picea sitchensis] 123 2e-26
gb|ABK24573.1| unknown [Picea sitchensis] 123 2e-26
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S... 123 3e-26
ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 122 4e-26
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 122 5e-26
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 122 5e-26
ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 122 5e-26
gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlise... 122 5e-26
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 122 5e-26
gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia ole... 122 7e-26
ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 121 9e-26
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus]
Length = 309
Score = 140 bits (353), Expect = 2e-31
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +2
Query: 5 RASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSD 184
R S GN N++YVGNLSWGVDN ALE+LFSE G VQEARVVYDR+SGRSRGFGFVTYSS +
Sbjct: 220 RTSSGNTNRVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPE 279
Query: 185 EVNKACERLDGTNLDGRPIRVNPAEDR 265
EVN A E LDG +LDGR IRV+PAE+R
Sbjct: 280 EVNSAIEALDGADLDGRSIRVSPAEER 306
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/83 (50%), Positives = 54/83 (65%)
Frame = +2
Query: 2 ERASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSS 181
E SF K++VGNL + VD+ AL LF + GNV+ V+YD+ SGRSRGFGFVT SS
Sbjct: 121 EEQSFSPDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSL 180
Query: 182 DEVNKACERLDGTNLDGRPIRVN 250
E A ++ +G L GR +RVN
Sbjct: 181 AEAEAAAQQFNGYELQGRALRVN 203
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 130 bits (326), Expect = 2e-28
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF ++N++YVGNL+WGVD DALE+LFSE G V +A+VVYDRDSGRSRGFGFVTYSS++EV
Sbjct: 183 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 242
Query: 191 NKACERLDGTNLDGRPIRVNPAEDR 265
N A E LDG +L+GR IRV+PAE R
Sbjct: 243 NNAIESLDGVDLNGRAIRVSPAEAR 267
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 2 ERASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSS 181
E +F KI+VGNL + D+ AL LF GNV+ V+YD+ +GRSRGFGFVT SS
Sbjct: 79 EERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138
Query: 182 DEVNKACERLDGTNLDGRPIRVN--PAEDRR*N 274
+EV AC++ +G LDGR +RVN P ++R N
Sbjct: 139 EEVEAACQQFNGYELDGRALRVNSGPPPEKREN 171
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 130 bits (326), Expect = 2e-28
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF ++N++YVGNL+WGVD DALE+LFSE G V +A+VVYDRDSGRSRGFGFVTYSS++EV
Sbjct: 189 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 248
Query: 191 NKACERLDGTNLDGRPIRVNPAEDR 265
N A E LDG +L+GR IRV+PAE R
Sbjct: 249 NNAIESLDGVDLNGRAIRVSPAEAR 273
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/93 (49%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 2 ERASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSS 181
E +F KI+VGNL + D+ AL LF GNV+ V+YD+ +GRSRGFGFVT SS
Sbjct: 79 EERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138
Query: 182 DEVNKACERLDGTNLDGRPIRVN--PAEDRR*N 274
+EV AC++ +G LDGR +RVN P ++R N
Sbjct: 139 EEVEAACQQFNGYELDGRALRVNSGPPPEKREN 171
>gb|EMT07115.1| 29 kDa ribonucleoprotein B, chloroplastic [Aegilops tauschii]
Length = 551
Score = 127 bits (320), Expect = 1e-27
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF +ANK+YVGNLSWGVDN LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S+DEV
Sbjct: 460 SFDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEV 519
Query: 191 NKACERLDGTNLDGRPIRVNPAEDRR*NKKQKHF 292
N A LDG +LDGR IRV AE + ++Q+ F
Sbjct: 520 NNAISNLDGVDLDGRQIRVTVAESK--PREQRRF 551
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/81 (49%), Positives = 54/81 (66%)
Frame = +2
Query: 8 ASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDE 187
A + K++VGNL + VD+ L LF + G+V+ VVYDR +GRSRGFGFVT S++E
Sbjct: 353 AEYSEDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSAEE 412
Query: 188 VNKACERLDGTNLDGRPIRVN 250
V A E+ +G GRP+RVN
Sbjct: 413 VAAAVEQFNGYTFQGRPLRVN 433
>gb|EMS60358.1| 31 kDa ribonucleoprotein, chloroplastic [Triticum urartu]
Length = 228
Score = 127 bits (320), Expect = 1e-27
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF +ANK+YVGNLSWGVDN LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S+DEV
Sbjct: 137 SFDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEV 196
Query: 191 NKACERLDGTNLDGRPIRVNPAEDRR*NKKQKHF 292
N A LDG +LDGR IRV AE + ++Q+ F
Sbjct: 197 NNAISNLDGVDLDGRQIRVTVAESK--PREQRRF 228
>dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 278
Score = 127 bits (320), Expect = 1e-27
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF +ANK+YVGNLSWGVDN LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S+DEV
Sbjct: 187 SFDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEV 246
Query: 191 NKACERLDGTNLDGRPIRVNPAEDRR*NKKQKHF 292
N A LDG +LDGR IRV AE + ++Q+ F
Sbjct: 247 NNAISNLDGVDLDGRQIRVTVAESK--PREQRRF 278
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +2
Query: 8 ASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDE 187
A + K++VGNL + VD+ L LF + G+V+ VVYDR +GRSRGFGFVT S +E
Sbjct: 81 AEYSEDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEE 140
Query: 188 VNKACERLDGTNLDGRPIRVN 250
V A E+ +G GRP+RVN
Sbjct: 141 VAAAVEQFNGYTFQGRPLRVN 161
>dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 127 bits (320), Expect = 1e-27
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF +ANK+YVGNLSWGVDN LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S+DEV
Sbjct: 9 SFDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEV 68
Query: 191 NKACERLDGTNLDGRPIRVNPAEDRR*NKKQKHF 292
N A LDG +LDGR IRV AE + ++Q+ F
Sbjct: 69 NNAISNLDGVDLDGRQIRVTVAESK--PREQRRF 100
>ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 125 bits (315), Expect = 5e-27
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF + NK+YVGNLSWGVDN LE+LFSE G V +A+V+YDRDSGRSRGFGFVTY S+DEV
Sbjct: 184 SFDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEV 243
Query: 191 NKACERLDGTNLDGRPIRVNPAEDR 265
N A LDG +LDGR IRV AE +
Sbjct: 244 NNAISNLDGVDLDGRQIRVTVAESK 268
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = +2
Query: 8 ASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDE 187
A + K++VGNL + VD+ L LF + G+V+ VVYDR +GRSRGFGFVT S+++E
Sbjct: 78 AEYSEDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEE 137
Query: 188 VNKACERLDGTNLDGRPIRVN 250
V+ A E+ +G GRP+RVN
Sbjct: 138 VSAAVEQFNGYTFQGRPLRVN 158
>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
gi|548849631|gb|ERN08390.1| hypothetical protein
AMTR_s00148p00072380 [Amborella trichopoda]
Length = 272
Score = 123 bits (309), Expect = 2e-26
Identities = 58/83 (69%), Positives = 70/83 (84%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF + N++YVGNLSWGVD+ ALE+LFSE G V EA+VVYDR+SGRSRGFGFVTYS+++EV
Sbjct: 183 SFDSPNRVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSTAEEV 242
Query: 191 NKACERLDGTNLDGRPIRVNPAE 259
A L+G +LDGRPIRV PAE
Sbjct: 243 TSAISTLNGADLDGRPIRVTPAE 265
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +2
Query: 2 ERASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSS 181
E A+F K++VGNL + VD+ L LF + GNV+ V+YD+ +GRSRGFGFVT S+
Sbjct: 76 EEANFSADLKLFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMSTV 135
Query: 182 DEVNKACERLDGTNLDGRPIRVN----PAED 262
+EV A ++ +G + +GR +RVN PA D
Sbjct: 136 EEVEAAVQQFNGHDFEGRQLRVNSGPPPARD 166
>gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 123 bits (309), Expect = 2e-26
Identities = 59/83 (71%), Positives = 68/83 (81%)
Frame = +2
Query: 20 NANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKA 199
+ NKIYVGNL W D+++L LFSEHG V EARVVYDR++GRSRGFGFVTYSS EVN A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 200 CERLDGTNLDGRPIRVNPAEDRR 268
LDGT++DGRP+RVN AEDRR
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRR 287
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 29 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKACER 208
K++VGNL + +DN L LF G V + ++ DR++G SRGFGFVT + +E K E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 209 LDGTNLDGRPIRVNPAEDR 265
+ +L+GR + VN A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 123 bits (309), Expect = 2e-26
Identities = 59/83 (71%), Positives = 68/83 (81%)
Frame = +2
Query: 20 NANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKA 199
+ NKIYVGNL W D+++L LFSEHG V EARVVYDR++GRSRGFGFVTYSS EVN A
Sbjct: 205 STNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYSSESEVNDA 264
Query: 200 CERLDGTNLDGRPIRVNPAEDRR 268
LDGT++DGRP+RVN AEDRR
Sbjct: 265 IAALDGTDMDGRPLRVNIAEDRR 287
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 29 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKACER 208
K++VGNL + +DN L LF G V + ++ DR++G SRGFGFVT + +E K E
Sbjct: 114 KLFVGNLPFNLDNQQLGELFEGAGEVLDVNIITDRETGNSRGFGFVTMGTVEEAEKGVEL 173
Query: 209 LDGTNLDGRPIRVNPAEDR 265
+ +L+GR + VN A R
Sbjct: 174 FNRHSLEGRLLTVNKAAPR 192
>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein
SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 123 bits (308), Expect = 3e-26
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = +2
Query: 2 ERASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSS 181
+R G+AN++YVGNLSWGVDN AL +LFSE G V EAR+VYDR+SGRSRGFGFVTY S+
Sbjct: 169 QRGPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSA 228
Query: 182 DEVNKACERLDGTNLDGRPIRVNPAEDR 265
+EV A LDG++LDGR IRV AE +
Sbjct: 229 EEVENAISNLDGSDLDGRQIRVTVAESK 256
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2
Query: 14 FGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVN 193
F +++VGNL + VD+ L LF + G+V+ V+YD+ +GRSRGFGFVT SS EV
Sbjct: 79 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVE 138
Query: 194 KACERLDGTNLDGRPIRVN 250
A E+ +G LDGR +RVN
Sbjct: 139 AAVEQFNGYVLDGRSLRVN 157
>ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Oryza
brachyantha]
Length = 262
Score = 122 bits (307), Expect = 4e-26
Identities = 59/88 (67%), Positives = 69/88 (78%)
Frame = +2
Query: 5 RASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSD 184
RA G AN++YVGNLSWGVDN AL +LFS G V EAR++YDR+SGRSRGFGFVTY S++
Sbjct: 170 RAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVLEARIIYDRESGRSRGFGFVTYGSAE 229
Query: 185 EVNKACERLDGTNLDGRPIRVNPAEDRR 268
EV A LDGT+LDGR IRV AE R+
Sbjct: 230 EVENAVSNLDGTDLDGRQIRVTVAESRQ 257
Score = 79.0 bits (193), Expect = 7e-13
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +2
Query: 14 FGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVN 193
F +++VGNL + VD+ L LF + G+V+ V+YD+ +GRSRGFGFVT S+ +EV
Sbjct: 79 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 138
Query: 194 KACERLDGTNLDGRPIRVN 250
A E+ +G LDGR +RVN
Sbjct: 139 AAVEQFNGHILDGRSLRVN 157
>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 122 bits (306), Expect = 5e-26
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
S ++N++YVGNLSWGVD+ AL+ LFSE GNV +A+VVYDRDSGRSRGFGFVTYSSS EV
Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261
Query: 191 NKACERLDGTNLDGRPIRVNPAEDR 265
N A + L+G +LDGR IRV+ AE+R
Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEER 286
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 2 ERASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSS 181
E+ F K++VGNL + VD+ AL LF GNV+ V+YD+ +GRSRGFGFVT S+
Sbjct: 79 EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTK 138
Query: 182 DEVNKACERLDGTNLDGRPIRVN--PAEDRR*N 274
+EV A ++ +G +DGR IRVN PA +R N
Sbjct: 139 EEVEAAEQQFNGYEIDGRAIRVNAGPAPAKREN 171
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 122 bits (306), Expect = 5e-26
Identities = 59/83 (71%), Positives = 68/83 (81%)
Frame = +2
Query: 17 GNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNK 196
G+ N++YVGNLSWGVD+ ALESLFSE G V EARV+YDRDSGRS+GFGFVTY SS EV
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260
Query: 197 ACERLDGTNLDGRPIRVNPAEDR 265
A + LDG +LDGR IRV+ AE R
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEAR 283
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF K++VGNL + VD+ L LF GNV+ V+YD+ +GRSRGFGFVT SS EV
Sbjct: 86 SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145
Query: 191 NKACERLDGTNLDGRPIRVN 250
A ++ +G LDGRP+RVN
Sbjct: 146 EAAAQQFNGYELDGRPLRVN 165
>ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial
[Oryza brachyantha]
Length = 211
Score = 122 bits (306), Expect = 5e-26
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
+F ++NK+YVGNLSWGVDN LE+LFSE GNV +A+V+YDR+SGRSRGFGFVTY S++EV
Sbjct: 122 NFDSSNKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFVTYGSAEEV 181
Query: 191 NKACERLDGTNLDGRPIRVNPAEDR 265
A LDG +LDGR IRV AE +
Sbjct: 182 TNAISNLDGVDLDGRQIRVTVAESK 206
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 14 FGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVN 193
F K++VGNL + VD+ L LF + G+V+ VVYDR +GRSRGFGFVT SSS+E
Sbjct: 23 FAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSSSEEAG 82
Query: 194 KACERLDGTNLDGRPIRVN----PAED 262
A E+ +G GRP+RVN PA D
Sbjct: 83 AAVEQFNGYTFQGRPLRVNSGPPPARD 109
>gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlisea aurea]
Length = 213
Score = 122 bits (306), Expect = 5e-26
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = +2
Query: 20 NANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKA 199
++NK++VGNL+WGVD+ ALE+LFSE G+V+EA VVYDR+SGRSRGFGFVTY S +EVN A
Sbjct: 127 SSNKVHVGNLAWGVDDSALEALFSEQGDVKEATVVYDRESGRSRGFGFVTYGSREEVNNA 186
Query: 200 CERLDGTNLDGRPIRVNPAEDR 265
LDGT+L+GRPIRV+ AE R
Sbjct: 187 IRSLDGTDLNGRPIRVSAAESR 208
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = +2
Query: 29 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKACER 208
K+YVGNL + VD+ L LF + GNV+ V+YD++SGRSRGFGFVT S+ E A ++
Sbjct: 36 KLYVGNLPFNVDSATLAGLFEQAGNVEMVEVIYDKESGRSRGFGFVTMSTIREAETAAQQ 95
Query: 209 LDGTNLDGRPIRVN 250
+G GR +RVN
Sbjct: 96 FNGYEYQGRALRVN 109
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 122 bits (306), Expect = 5e-26
Identities = 59/83 (71%), Positives = 68/83 (81%)
Frame = +2
Query: 17 GNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNK 196
G+ N++YVGNLSWGVD+ ALESLFSE G V EARV+YDRDSGRS+GFGFVTY SS EV
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260
Query: 197 ACERLDGTNLDGRPIRVNPAEDR 265
A + LDG +LDGR IRV+ AE R
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEAR 283
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SF K++VGNL + VD+ L LF GNV+ V+YD+ +GRSRGFGFVT SS EV
Sbjct: 86 SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145
Query: 191 NKACERLDGTNLDGRPIRVN 250
A ++ +G LDGRP+RVN
Sbjct: 146 EAAAQQFNGYELDGRPLRVN 165
>gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 122 bits (305), Expect = 7e-26
Identities = 57/86 (66%), Positives = 75/86 (87%)
Frame = +2
Query: 11 SFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEV 190
SFG++N+++VGNLSW VD+DAL++LFSE G+V EA+V+YDRD+GRSRGFGFVTY+S++EV
Sbjct: 130 SFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEV 189
Query: 191 NKACERLDGTNLDGRPIRVNPAEDRR 268
N A E LDG +L+GR IRV AE R+
Sbjct: 190 NTAIESLDGVDLNGRSIRVTAAEARQ 215
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +2
Query: 29 KIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDEVNKACER 208
KI+VGNL + VD+ L LF G V+ V+YD+ +GRSRGFGFVT SS +EV A ++
Sbjct: 39 KIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQ 98
Query: 209 LDGTNLDGRPIRV 247
+ LDGR +RV
Sbjct: 99 FNNYELDGRTLRV 111
>ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 121 bits (304), Expect = 9e-26
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = +2
Query: 8 ASFGNANKIYVGNLSWGVDNDALESLFSEHGNVQEARVVYDRDSGRSRGFGFVTYSSSDE 187
A+ + N+IYVGNLSWGVD+ ALE+LFSE G V EARV+YDR++GRSRGFGFVTY+S++E
Sbjct: 164 ANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEE 223
Query: 188 VNKACERLDGTNLDGRPIRVNPAEDR 265
VN+A E LDG +L+GR IRV AE R
Sbjct: 224 VNRAIESLDGVDLNGRSIRVTMAEAR 249