BLASTX nr result
ID: Mentha26_contig00051475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00051475
(386 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU22664.1| hypothetical protein MIMGU_mgv1a000109mg [Mimulus... 99 5e-19
ref|XP_006347747.1| PREDICTED: mediator of RNA polymerase II tra... 67 3e-09
ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citr... 67 3e-09
ref|XP_004302054.1| PREDICTED: mediator of RNA polymerase II tra... 66 4e-09
ref|XP_004230096.1| PREDICTED: mediator of RNA polymerase II tra... 59 9e-07
ref|XP_007147172.1| hypothetical protein PHAVU_006G101900g [Phas... 56 5e-06
ref|XP_007208143.1| hypothetical protein PRUPE_ppa000128mg [Prun... 56 6e-06
>gb|EYU22664.1| hypothetical protein MIMGU_mgv1a000109mg [Mimulus guttatus]
Length = 1768
Score = 99.4 bits (246), Expect = 5e-19
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 QNPFSNFKNSMQSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIID- 178
QN SNFK+ M S ST+SL T VKSQA+ KLT SKSDQDL+ALRSP SG +GSYG++D
Sbjct: 711 QNSVSNFKSLMPSGSTSSLTTPSVKSQAMNKLTASKSDQDLSALRSPHSGRFGSYGVMDE 770
Query: 179 DQLTVSGLHPSRLLPPAQCSVPP 247
DQLTV+GL +RLL P Q + PP
Sbjct: 771 DQLTVAGLPSARLLSPPQRTGPP 793
>ref|XP_006347747.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Solanum tuberosum]
Length = 1791
Score = 67.0 bits (162), Expect = 3e-09
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Frame = +2
Query: 17 NFKNSM-QSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIID-DQLT 190
N+ NSM + V + +L +Q KKLT SKS+QDL ++RSP S GSY +D DQLT
Sbjct: 716 NYNNSMYKGVIQSGSVGSLAATQTGKKLTASKSEQDLTSVRSPHSAGVGSYTSLDEDQLT 775
Query: 191 VSGLHPSRLL-PPAQCSVPPXXXXXXXXXXXXXFPAEAVSGSYAVSGSNSWVASPTASTL 367
VS +RLL PP + S P G + + SNS V SP + T+
Sbjct: 776 VSTNRSARLLSPPHRVSSSSGKASGSRNSAVGTVP-----GGFRTADSNSLVLSPGSQTI 830
Query: 368 DSA 376
DSA
Sbjct: 831 DSA 833
>ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citrus clementina]
gi|568835227|ref|XP_006471680.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 14-like [Citrus
sinensis] gi|557535047|gb|ESR46165.1| hypothetical
protein CICLE_v10000014mg [Citrus clementina]
Length = 1820
Score = 66.6 bits (161), Expect = 3e-09
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Frame = +2
Query: 14 SNFKNSMQSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIIDDQLTV 193
SN K +QS S +SL + L +S AVKKL SKSDQDLA+LRSP S G+ +++ L
Sbjct: 740 SNVKGPVQSSSFSSLSSGLARSTAVKKLPASKSDQDLASLRSPHSVEIGT---VEEDLVS 796
Query: 194 SGLHPSRLLPPAQCSV--PPXXXXXXXXXXXXXFPAEAVSGSYA----VSGSNSWVASPT 355
G L PP SV PP P +V+GS A V+GS+S + P
Sbjct: 797 VGRSSRLLSPPRTASVRAPPPSAKPNG-------PRSSVTGSLAGSIKVAGSSSLASPPV 849
Query: 356 ASTLDSAI 379
+ D+ I
Sbjct: 850 SHAADTDI 857
>ref|XP_004302054.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Fragaria vesca subsp. vesca]
Length = 1823
Score = 66.2 bits (160), Expect = 4e-09
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Frame = +2
Query: 8 PFSNFKNSMQSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIIDDQL 187
P +N K S+QS S +S +S +VKK++ SKSDQDLA+LRSP YGS + +D L
Sbjct: 734 PSNNMKGSIQSASLSSQAAAPGRSVSVKKISVSKSDQDLASLRSPLLVEYGSTSMDEDHL 793
Query: 188 ---------TVSGLHPSRLLPPAQCSVPPXXXXXXXXXXXXXFPAEAVSGSYAVSGSNSW 340
G SRLL P S P P +G+ V+GSNS
Sbjct: 794 RFMSDTSKGATYGFRSSRLLSPPGPS-GPRISGPGMRPNGGNLPTGPPTGTIRVAGSNSC 852
Query: 341 VASPTASTLDSAI 379
V +P + DS +
Sbjct: 853 VTTPASRAPDSEV 865
>ref|XP_004230096.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Solanum lycopersicum]
Length = 1758
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +2
Query: 17 NFKNSM-QSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIID-DQLT 190
N+ NSM + V + +L +Q KKLT SKS+QDL +LRSP S GSY +D DQLT
Sbjct: 702 NYSNSMYKGVIQSGSVGSLAATQTGKKLTASKSEQDLTSLRSPHSAGVGSYTSLDEDQLT 761
Query: 191 VSGLHPSRLLPP 226
VS +RLL P
Sbjct: 762 VSTNRSARLLSP 773
>ref|XP_007147172.1| hypothetical protein PHAVU_006G101900g [Phaseolus vulgaris]
gi|561020395|gb|ESW19166.1| hypothetical protein
PHAVU_006G101900g [Phaseolus vulgaris]
Length = 1815
Score = 56.2 bits (134), Expect = 5e-06
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Frame = +2
Query: 23 KNSMQSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIIDDQL----- 187
K +QS S S+PT V++ A KKL+ SKS+QDLA+ +SP S S ID++
Sbjct: 742 KGPVQSSSVGSIPTGHVRNTAGKKLSASKSEQDLASPKSPHSVDISSSIAIDEEQLRVLN 801
Query: 188 -----TVSGLHPSRLLPP-----AQCSVPPXXXXXXXXXXXXXFPAEAVSGSYAVSGSNS 337
+SG SRLL P ++ S+P P + S+ V GS S
Sbjct: 802 DTSNEALSGSRSSRLLSPPRPTGSRMSIPNSR------------PNGPQADSFKVIGSAS 849
Query: 338 WVASPTASTLDSAI 379
+P + TL+S +
Sbjct: 850 CATTPVSQTLESTV 863
>ref|XP_007208143.1| hypothetical protein PRUPE_ppa000128mg [Prunus persica]
gi|462403785|gb|EMJ09342.1| hypothetical protein
PRUPE_ppa000128mg [Prunus persica]
Length = 1716
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +2
Query: 14 SNFKNSMQSVSTNSLPTNLVKSQAVKKLTGSKSDQDLAALRSPQSGSYGSYGIIDDQ--- 184
+N K +QS S SL + +S +VKK+ SKSDQDLA+LRSPQS YGS +D+
Sbjct: 711 NNLKGPIQSASLGSLSSGPGRSASVKKIPISKSDQDLASLRSPQSVEYGSCTSMDEDQLR 770
Query: 185 -LTVSGLHPSRLLPPAQC 235
L + L+P QC
Sbjct: 771 FLNDTSKDMLNLIPSLQC 788