BLASTX nr result
ID: Mentha26_contig00051353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00051353
(371 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU46592.1| hypothetical protein MIMGU_mgv1a001802mg [Mimulus... 55 6e-13
ref|XP_006355794.1| PREDICTED: DNA repair helicase UVH6-like [So... 55 3e-11
ref|XP_004240533.1| PREDICTED: DNA repair helicase UVH6-like [So... 55 3e-11
ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutr... 57 4e-10
dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila] 57 4e-10
ref|XP_006444090.1| hypothetical protein CICLE_v10018975mg [Citr... 57 5e-10
ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein ... 57 5e-10
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric... 57 7e-10
ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Caps... 56 9e-10
gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis] 57 3e-09
emb|CBI32371.3| unnamed protein product [Vitis vinifera] 55 3e-09
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v... 55 3e-09
ref|XP_004516632.1| PREDICTED: DNA repair helicase UVH6-like iso... 56 4e-09
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 56 5e-09
ref|XP_006654036.1| PREDICTED: DNA repair helicase UVH6-like [Or... 55 9e-09
ref|XP_006850721.1| hypothetical protein AMTR_s00025p00038580 [A... 54 1e-08
ref|XP_004960471.1| PREDICTED: DNA repair helicase UVH6-like [Se... 55 2e-08
gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D... 52 2e-08
ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]... 52 2e-08
ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arab... 52 2e-08
>gb|EYU46592.1| hypothetical protein MIMGU_mgv1a001802mg [Mimulus guttatus]
Length = 757
Score = 55.1 bits (131), Expect(2) = 6e-13
Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF +PFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGIPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 44.3 bits (103), Expect(2) = 6e-13
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNGVGQM 309
+FL MA+ YDK A+ K+TL+ +DLEKMVNG G M
Sbjct: 719 EFLRRMAQPYDKTGAVGKKTLLSQEDLEKMVNGAGDM 755
>ref|XP_006355794.1| PREDICTED: DNA repair helicase UVH6-like [Solanum tuberosum]
Length = 758
Score = 55.5 bits (132), Expect(2) = 3e-11
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 38.1 bits (87), Expect(2) = 3e-11
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNG 297
+FL MA+ YDKN A+ K+TL+ +DLE M+ G
Sbjct: 719 EFLRKMAQPYDKNGALGKKTLLSQEDLENMITG 751
>ref|XP_004240533.1| PREDICTED: DNA repair helicase UVH6-like [Solanum lycopersicum]
Length = 758
Score = 55.5 bits (132), Expect(2) = 3e-11
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 38.1 bits (87), Expect(2) = 3e-11
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNG 297
+FL MA+ YDKN A+ K+TL+ +DLE M+ G
Sbjct: 719 EFLRKMAQPYDKNGALGKKTLLSQEDLENMITG 751
>ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutrema salsugineum]
gi|557096027|gb|ESQ36609.1| hypothetical protein
EUTSA_v10006888mg [Eutrema salsugineum]
Length = 758
Score = 57.0 bits (136), Expect(2) = 4e-10
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L +MF VPFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVVMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.7 bits (73), Expect(2) = 4e-10
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV-NGVGQM 309
+FL MA+ YDK M ++TL+ +DLEKM GV M
Sbjct: 719 EFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDM 756
>dbj|BAJ34374.1| unnamed protein product [Thellungiella halophila]
Length = 376
Score = 57.0 bits (136), Expect(2) = 4e-10
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L +MF VPFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 230 RHYGRLVVMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 289
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 290 ADYGMMIFADK 300
Score = 32.7 bits (73), Expect(2) = 4e-10
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV-NGVGQM 309
+FL MA+ YDK M ++TL+ +DLEKM GV M
Sbjct: 337 EFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDM 374
>ref|XP_006444090.1| hypothetical protein CICLE_v10018975mg [Citrus clementina]
gi|568852134|ref|XP_006479735.1| PREDICTED: DNA repair
helicase UVH6-like [Citrus sinensis]
gi|557546352|gb|ESR57330.1| hypothetical protein
CICLE_v10018975mg [Citrus clementina]
Length = 759
Score = 57.4 bits (137), Expect(2) = 5e-10
Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.0 bits (71), Expect(2) = 5e-10
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVN 294
+FL MA+ YDK ++ ++TL+ DLEKM N
Sbjct: 719 EFLRKMAQPYDKAGSIGRKTLLSQADLEKMTN 750
>ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein [Populus trichocarpa]
gi|222842578|gb|EEE80125.1| ULTRAVIOLET HYPERSENSITIVE 6
family protein [Populus trichocarpa]
Length = 758
Score = 57.4 bits (137), Expect(2) = 5e-10
Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.0 bits (71), Expect(2) = 5e-10
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKM 288
+FL MA+ YDK + K+TL+ +DLEKM
Sbjct: 719 EFLRKMAQPYDKTGSSGKKTLLSQEDLEKM 748
>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
gi|223540142|gb|EEF41719.1| DNA repair helicase
rad3/xp-d, putative [Ricinus communis]
Length = 758
Score = 57.0 bits (136), Expect(2) = 7e-10
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF +PFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGIPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.0 bits (71), Expect(2) = 7e-10
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKM 288
+FL MA+ YDK A ++TL+ +DLEKM
Sbjct: 719 EFLRKMAQPYDKTGASGRKTLLSQEDLEKM 748
>ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Capsella rubella]
gi|482575519|gb|EOA39706.1| hypothetical protein
CARUB_v10008351mg [Capsella rubella]
Length = 786
Score = 55.8 bits (133), Expect(2) = 9e-10
Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L +M+ VPFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 640 RHYGRLVVMYGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 699
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 700 ADYGMMIFADK 710
Score = 32.7 bits (73), Expect(2) = 9e-10
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV-NGVGQM 309
+FL MA+ YDK M ++TL+ +DLEKM GV M
Sbjct: 747 EFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDM 784
>gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis]
Length = 758
Score = 57.4 bits (137), Expect(2) = 3e-09
Identities = 37/71 (52%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLRDT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 29.6 bits (65), Expect(2) = 3e-09
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKM 288
+FL MA+ YDK ++TL+ +DLEKM
Sbjct: 719 EFLRKMAQPYDKAGGSGRKTLLSQEDLEKM 748
>emb|CBI32371.3| unnamed protein product [Vitis vinifera]
Length = 922
Score = 55.5 bits (132), Expect(2) = 3e-09
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 776 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 835
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 836 ADYGMMIFADK 846
Score = 31.2 bits (69), Expect(2) = 3e-09
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNG 297
+FL MA+ YDK ++TL+ +DLEKM +G
Sbjct: 883 EFLRKMAQPYDKAGVSGRKTLLSEEDLEKMGDG 915
>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
Length = 758
Score = 55.5 bits (132), Expect(2) = 3e-09
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 31.2 bits (69), Expect(2) = 3e-09
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNG 297
+FL MA+ YDK ++TL+ +DLEKM +G
Sbjct: 719 EFLRKMAQPYDKAGVSGRKTLLSEEDLEKMGDG 751
>ref|XP_004516632.1| PREDICTED: DNA repair helicase UVH6-like isoform X1 [Cicer
arietinum] gi|502180410|ref|XP_004516633.1| PREDICTED:
DNA repair helicase UVH6-like isoform X2 [Cicer
arietinum] gi|502180414|ref|XP_004516634.1| PREDICTED:
DNA repair helicase UVH6-like isoform X3 [Cicer
arietinum]
Length = 759
Score = 55.8 bits (133), Expect(2) = 4e-09
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 612 RHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 30.4 bits (67), Expect(2) = 4e-09
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV 291
+FL MA+ YDK ++TL+ +DLEK+V
Sbjct: 719 EFLRKMAQPYDKTGGTGRKTLLSQEDLEKIV 749
>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
[Cucumis sativus]
Length = 919
Score = 55.8 bits (133), Expect(2) = 5e-09
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 773 RHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 832
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 833 ADYGMMIFADK 843
Score = 30.0 bits (66), Expect(2) = 5e-09
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKM 288
+FL MA+ YDK + ++TL+ +DLEKM
Sbjct: 880 EFLRKMAQPYDKAGSSGRKTLLSQEDLEKM 909
>ref|XP_006654036.1| PREDICTED: DNA repair helicase UVH6-like [Oryza brachyantha]
Length = 758
Score = 55.5 bits (132), Expect(2) = 9e-09
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 615 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 674
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 675 ADYGMMIFADK 685
Score = 29.6 bits (65), Expect(2) = 9e-09
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNGVGQM 309
+FL MA+ YDK + +TL+ +DL+KM +M
Sbjct: 722 EFLRRMAQPYDKTGSGGSKTLLTEEDLQKMAQDAMEM 758
>ref|XP_006850721.1| hypothetical protein AMTR_s00025p00038580 [Amborella trichopoda]
gi|548854392|gb|ERN12302.1| hypothetical protein
AMTR_s00025p00038580 [Amborella trichopoda]
Length = 762
Score = 54.3 bits (129), Expect(2) = 1e-08
Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 617 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDAVRQAAQCVGRVIRSK 676
Query: 161 ADCGMMMSADK 193
+D GMM+ ADK
Sbjct: 677 SDYGMMIFADK 687
Score = 30.4 bits (67), Expect(2) = 1e-08
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWA-MVKRTLVLHQDLEKMVNGVGQM 309
+FL MA+ YDK+ K+TL+ +DLEKM +G M
Sbjct: 724 EFLRKMAQPYDKSGGGSGKKTLLSQEDLEKMERTMGMM 761
>ref|XP_004960471.1| PREDICTED: DNA repair helicase UVH6-like [Setaria italica]
Length = 758
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L IMF VPFQ S ILL RLEYLR+T Q K+ A Q ++ K
Sbjct: 615 RHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSK 674
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 675 ADYGMMIFADK 685
Score = 28.9 bits (63), Expect(2) = 2e-08
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMVNGVGQM 309
+FL MA+ YDK + K+TL+ +DL+ M +M
Sbjct: 722 EFLRRMAQPYDKTGSGGKKTLLTEEDLQNMAQDEMEM 758
>gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
thaliana]
Length = 758
Score = 51.6 bits (122), Expect(2) = 2e-08
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L +M+ VPFQ S IL RLEYL DT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.7 bits (73), Expect(2) = 2e-08
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV-NGVGQM 309
+FL MA+ YDK M ++TL+ +DLEKM GV M
Sbjct: 719 EFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDM 756
>ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6
[Arabidopsis thaliana]
gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA
repair helicase UVH6; AltName: Full=ERCC2 homolog;
AltName: Full=RAD3 homolog; Short=AtUVH6; Short=AtXPD;
AltName: Full=UV hypersensitive protein 6; AltName:
Full=XPD homolog gi|17064790|gb|AAL32549.1| Strong
similarity to nucleotide excision repair protein
[Arabidopsis thaliana] gi|20258776|gb|AAM13910.1|
putative DNA repair protein [Arabidopsis thaliana]
gi|22651570|gb|AAM10793.1| DNA repair/transcription
factor protein [Arabidopsis thaliana]
gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis
thaliana] gi|332189421|gb|AEE27542.1| DNA repair
helicase UVH6 [Arabidopsis thaliana]
gi|332189422|gb|AEE27543.1| DNA repair helicase UVH6
[Arabidopsis thaliana]
Length = 758
Score = 51.6 bits (122), Expect(2) = 2e-08
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L +M+ VPFQ S IL RLEYL DT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.7 bits (73), Expect(2) = 2e-08
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV-NGVGQM 309
+FL MA+ YDK M ++TL+ +DLEKM GV M
Sbjct: 719 EFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDM 756
>ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
lyrata] gi|297335286|gb|EFH65703.1| hypothetical protein
ARALYDRAFT_470299 [Arabidopsis lyrata subsp. lyrata]
Length = 758
Score = 51.6 bits (122), Expect(2) = 2e-08
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +2
Query: 2 RHYG*LAIMFSVPFQNMFSSILLERLEYLRDTLQGKKR-----GASCQLCGTSNHIL--K 160
RHYG L +M+ VPFQ S IL RLEYL DT Q K+ A Q ++ K
Sbjct: 612 RHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSK 671
Query: 161 ADCGMMMSADK 193
AD GMM+ ADK
Sbjct: 672 ADYGMMIFADK 682
Score = 32.7 bits (73), Expect(2) = 2e-08
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QFL*TMARSYDKNWAMVKRTLVLHQDLEKMV-NGVGQM 309
+FL MA+ YDK M ++TL+ +DLEKM GV M
Sbjct: 719 EFLRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDM 756