BLASTX nr result

ID: Mentha26_contig00050933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00050933
         (559 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [C...    69   1e-12
ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medica...    60   3e-07
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica...    60   3e-07

>ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]
          Length = 828

 Score = 68.6 bits (166), Expect(2) = 1e-12
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -2

Query: 450 PQRGRESTEHLSHWREFRPHPIPNSCSP 367
           PQRGRESTEHLSHWREFRPHPIPNSCSP
Sbjct: 423 PQRGRESTEHLSHWREFRPHPIPNSCSP 450



 Score = 30.0 bits (66), Expect(2) = 1e-12
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 364 DDRVG*IVTSYDRVG*ARAASSQ 296
           D R+G IVTSYDRVG  R+ ++Q
Sbjct: 453 DSRLGFIVTSYDRVGSCRSNNNQ 475


>ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477379|gb|AES58582.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 569

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 12/53 (22%)
 Frame = +2

Query: 329 IVRGHNSP------------NTIIRGEQELGIGCGRNSRQWLRCSVDSLPLCG 451
           I+R H++P             ++  G  ELGIGCGRNSRQWLRCSVDSLPLCG
Sbjct: 377 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCG 429


>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477359|gb|AES58562.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 548

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 12/53 (22%)
 Frame = +2

Query: 329 IVRGHNSP------------NTIIRGEQELGIGCGRNSRQWLRCSVDSLPLCG 451
           I+R H++P             ++  G  ELGIGCGRNSRQWLRCSVDSLPLCG
Sbjct: 356 ILRCHDAPIPMAIPLILLALGSLFVGYLELGIGCGRNSRQWLRCSVDSLPLCG 408


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