BLASTX nr result
ID: Mentha26_contig00050639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00050639
(567 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 77 3e-12
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 73 6e-11
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 72 1e-10
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 70 4e-10
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 67 3e-09
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi... 66 6e-09
gb|AAC62795.1| contains similarity to retroviral aspartyl protea... 65 9e-09
dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana] 64 3e-08
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 64 4e-08
emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabido... 64 4e-08
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 63 5e-08
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 63 6e-08
emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera] 62 1e-07
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera] 60 3e-07
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum] 60 5e-07
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group... 59 7e-07
gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa] 59 9e-07
ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215... 58 1e-06
emb|CAN73696.1| hypothetical protein VITISV_038483 [Vitis vinifera] 59 1e-06
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi... 58 2e-06
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 77.0 bits (188), Expect = 3e-12
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
D KG +G G+RIGNLYVLDT VWH R GH +L LS +
Sbjct: 532 DLTKGLTLGEGKRIGNLYVLDTQSPAISVNAVVDV---SVWHKRLGHPSFSRLDSLSEVL 588
Query: 125 PMS---NVKDSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+ N K + CH+C LAKQK+LSF ++NI ++ F+L+H D+
Sbjct: 589 GTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDV 632
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 72.8 bits (177), Expect = 6e-11
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
D KG+ +G GRR+ NLY+LD +WH R GH ++L +S S+
Sbjct: 521 DLIKGRMLGQGRRVANLYLLDVGDQSISVNAVVDI---SMWHRRLGHASLQRLDAISDSL 577
Query: 125 PMSNVKDS---VCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+ K+ CH+C LAKQ++LSF S+ + FDL+H D+
Sbjct: 578 GTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDV 621
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 72.0 bits (175), Expect = 1e-10
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
D KG IG GRR+ NLYVLD +WH R GH +L +S ++
Sbjct: 481 DPTKGWTIGQGRRVANLYVLDVKSSPMKINAVVDI---SLWHKRLGHPSYTRLDKISEAL 537
Query: 125 PMSNVK---DSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+ K D+ CH+C LAKQK+LS+S ++I +A F L+H D+
Sbjct: 538 GTTKHKNKGDAHCHVCHLAKQKKLSYSSQNHICTASFQLLHVDV 581
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 70.1 bits (170), Expect = 4e-10
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = -2
Query: 188 VWHSRPGHLGPEKLKFLSISIPMSNVKD--SVCHICPLAKQKRLSFSVSDNIASAHFDLI 15
+WH R GH ++K L+ I +S+ + VCHICPLAKQ+RLSF + +NIA FDLI
Sbjct: 1796 MWHKRMGHPSISRIKELAKMIEISDFPNCKEVCHICPLAKQRRLSFPILNNIAENIFDLI 1855
Query: 14 HCDI 3
HCDI
Sbjct: 1856 HCDI 1859
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -2
Query: 188 VWHSRPGHLGPEKLKFLSISIPMSNVKD--SVCHICPLAKQKRLSFSVSDNIASAHFDLI 15
+WH R GH ++K L+ I +S+ + V HICPLAKQ+RLSF + +NIA F+LI
Sbjct: 371 MWHKRMGHPSISRIKELAKMIEISDFPNCKEVYHICPLAKQRRLSFPILNNIAENVFELI 430
Query: 14 HCDI 3
HCDI
Sbjct: 431 HCDI 434
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 67.0 bits (162), Expect = 3e-09
Identities = 44/113 (38%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSD----------VWHSRPGHLGP 156
D K Q+IG G +IG LYVLDT+ +WHSR GH
Sbjct: 536 DPIKEQKIGRGNQIGGLYVLDTSSVECTSVDINSSVTEKQYCNAVVDSALWHSRLGHPSY 595
Query: 155 EKLKFLS--ISIPMSNVKDSV-CHICPLAKQKRLSFSVSDNIASAHFDLIHCD 6
EK L + +P N +D V C IC AKQK LSF +N++ FDLIH D
Sbjct: 596 EKNDVLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHID 648
>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 66.2 bits (160), Expect = 6e-09
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
D KG+ +G GRR+ NLYV+D WH+R H ++L +S S+
Sbjct: 380 DLIKGRMLGHGRRVANLYVMDVEDTNVSVNAVVDI---STWHNRLRHASLQRLDVISESL 436
Query: 125 PMSNVKDS---VCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+ K+ CH+C LAK ++LSF +N+ + F+++H DI
Sbjct: 437 GTTKHKNKGSDYCHVCHLAKHRKLSFPSQNNVCNEIFEMLHIDI 480
>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
rvp.hmm, score: 11.80) [Arabidopsis thaliana]
Length = 1244
Score = 65.5 bits (158), Expect = 9e-09
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
D K RIG GRRIGNLYVLDT +WH R GH +L +S +
Sbjct: 508 DLTKDLRIGRGRRIGNLYVLDTTPPLDSVSVNAVVDV-SLWHMRMGHPAYSRLDAISDIL 566
Query: 125 PMSNVKD---SVCHICPLAKQKRLSFSVSDNI 39
+ K+ + CHIC LAKQK+LSF S+NI
Sbjct: 567 RTTKHKNKGSAYCHICHLAKQKKLSFQSSNNI 598
>dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana]
Length = 161
Score = 63.9 bits (154), Expect = 3e-08
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = -2
Query: 284 IGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISIPMS---N 114
IG GRRIGNLYVLDT +W+ R GH +L LS + S N
Sbjct: 55 IGKGRRIGNLYVLDTKTPSISLNAVVDVG---MWNRRLGHPSYSRLDVLSEDLGTSKHKN 111
Query: 113 VKDSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+S CH C LAK ++L F +NI ++ F+L+H D+
Sbjct: 112 KDNSYCHDCHLAKHRKLYFPSGNNICNSAFELLHIDV 148
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 63.5 bits (153), Expect = 4e-08
Identities = 43/102 (42%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
DA + IG+G++ LY L AQ SD+WH R GH L+ L+
Sbjct: 501 DATTRKTIGLGKQHNGLYYL--AQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVN 558
Query: 125 PMSNVKDS-VCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
P VC ICPLAKQ RLSF S + A FDLIHCDI
Sbjct: 559 PKIYFDSKHVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDI 600
>emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabidopsis thaliana]
gi|7268775|emb|CAB78981.1| putative LTR retrotransposon
(fragment) [Arabidopsis thaliana]
Length = 281
Score = 63.5 bits (153), Expect = 4e-08
Identities = 41/111 (36%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Frame = -2
Query: 284 IGMGRRIGNLYVLD------------TAQXXXXXXXXXXXXXSDV-WHSRPGHLGPEKLK 144
IG G +GNLYVLD TA V WH R GH K+
Sbjct: 100 IGRGSEVGNLYVLDFNENNHIVSLKGTASMCPEFSVCSSVVVDSVTWHKRLGHPAYSKID 159
Query: 143 FLSISIPMSNVK-----DSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCD 6
LS + + + K VCH+C L+KQK LSF N+ SA FDL+H D
Sbjct: 160 LLSDVLNLKDKKINKEHSPVCHVCHLSKQKHLSFQYRQNMCSAAFDLVHID 210
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 63.2 bits (152), Expect = 5e-08
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Frame = -2
Query: 344 LPQDRVTLVLPLVDAFKGQRIGMGRRIGNLYVLD-------------TAQXXXXXXXXXX 204
+P+ + L+ L K IG G ++GNLYVLD T+
Sbjct: 490 IPEFKFNLISELT---KELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPEFSVCSSV 546
Query: 203 XXXSDVWHSRPGHLGPEKLKFLS----ISIPMSNVKDS----VCHICPLAKQKRLSFSVS 48
S WH R GH K+ LS + + N + S VCH+C L+KQK LSF
Sbjct: 547 VVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQKHLSFQSR 606
Query: 47 DNIASAHFDLIHCD 6
N+ SA FDL+H D
Sbjct: 607 QNMCSAAFDLVHID 620
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 62.8 bits (151), Expect = 6e-08
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Frame = -2
Query: 311 LVDAFKGQRIGMGRRIGNLYVLD----TAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLK 144
L DA + +GMG+++ NLY++D + D+WH R GH +KL+
Sbjct: 361 LQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQ 420
Query: 143 FLS--ISIP-MSNVKDSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCD 6
+S +S P N D C +C ++KQK L F +N +S FDLIH D
Sbjct: 421 PMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHID 469
>emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera]
Length = 1158
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -2
Query: 191 DVWHSRPGHLGPEKLKFLSISIPMSNVK-DSVCHICPLAKQKRLSFSVSDNIASAHFDLI 15
D+WHSR GH+ P +L F++ + +V+ ++ C ICPLAK RL F S ++ F+LI
Sbjct: 471 DLWHSRLGHVSPSRLSFIAKNFLNFSVQSNNACPICPLAKXSRLPFGTSXISSTKPFELI 530
Query: 14 HCDI 3
HCDI
Sbjct: 531 HCDI 534
>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
Length = 1472
Score = 60.5 bits (145), Expect = 3e-07
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -2
Query: 191 DVWHSRPGHLGPEKLKFLSISIPMSNVK-DSVCHICPLAKQKRLSFSVSDNIASAHFDLI 15
D+WHSR GH+ P +L F++ + +V+ ++ C ICPLAKQ RL F S ++ F++I
Sbjct: 505 DLWHSRLGHVSPSRLSFIAKNFLNFSVQSNNACPICPLAKQSRLPFGTSAISSTKPFEII 564
Query: 14 HCDI 3
HC I
Sbjct: 565 HCHI 568
>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
Length = 826
Score = 59.7 bits (143), Expect = 5e-07
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = -2
Query: 188 VWHSRPGHLGPEKLKFLSISIPMSNVKDS---VCHICPLAKQKRLSFSVSDNIASAHFDL 18
+WH R GHLG E L L S +S KD +CH C L + RL FS S + A+ +FDL
Sbjct: 594 LWHRRLGHLGREALSQLVSSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDL 653
Query: 17 IHCDI 3
IHCD+
Sbjct: 654 IHCDL 658
>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709048|gb|ABF96843.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 594
Score = 59.3 bits (142), Expect = 7e-07
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -2
Query: 188 VWHSRPGHLGPEKLKFLS--ISIPMSNVKDSVCHICPLAKQKRLSFSVSDNIASAHFDLI 15
+WH R GH GP + L +IP S +S+CH C L K RL F+ S + S+ F+L+
Sbjct: 482 LWHRRLGHPGPTAVTTLQHLSAIPRSKTNNSLCHACQLGKHTRLPFNKSTSSTSSPFELV 541
Query: 14 HCDI 3
HCD+
Sbjct: 542 HCDV 545
>gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]
Length = 937
Score = 58.9 bits (141), Expect = 9e-07
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYVLDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSISI 126
D KG I GRR+ NLYVLDT + +WH R GH +L +S +
Sbjct: 442 DRIKGLMIEKGRRVANLYVLDTEEKIQVNVVVDVV----MWHKRFGHPSYSRLDVISKVL 497
Query: 125 PMS---NVKDSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+ N K + CHI LAKQ +L + +N+ F+L+H D+
Sbjct: 498 GTTKHKNKKSAYCHIYHLAKQIKLFYVSPNNMCKIIFELLHIDV 541
>ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215551 [Cucumis sativus]
Length = 528
Score = 57.8 bits (138), Expect(2) = 1e-06
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = -2
Query: 305 DAFKGQRIGMGRRIGNLYV--LDTAQXXXXXXXXXXXXXSDVWHSRPGHLGPEKLKFLSI 132
D F ++IG + LYV L A + +WH R GH + LK L
Sbjct: 294 DKFALKKIGSAELLYGLYVFKLRNAFNLQSLICAVNSDNTFLWHQRLGHPSVDVLKSLQS 353
Query: 131 SIPMSNVKDSVCHICPLAKQKRLSFSVSDNIASAHFDLIHCDI 3
+ + + C C LAKQ+RLSFS +++++ FDLIH DI
Sbjct: 354 MLQLKSFTSHTCTTCSLAKQRRLSFSSNNHVSPNSFDLIHVDI 396
Score = 20.8 bits (42), Expect(2) = 1e-06
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 423 QCQQLISFLQSQM 385
QCQ L++ LQSQ+
Sbjct: 247 QCQNLLNQLQSQI 259
>emb|CAN73696.1| hypothetical protein VITISV_038483 [Vitis vinifera]
Length = 1783
Score = 58.5 bits (140), Expect = 1e-06
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 191 DVWHSRPGHLGPEKLKFLSISIPMSNVK-DSVCHICPLAKQKRLSFSVSDNIASAHFDLI 15
D+WHS GH+ P +L F++ + V+ ++ C ICPLAKQ RL F S ++ F++I
Sbjct: 889 DLWHSCLGHVSPSRLSFIAKNFLNFFVQSNNACPICPLAKQSRLPFGTSAISSTKPFEII 948
Query: 14 HCDI 3
HCDI
Sbjct: 949 HCDI 952
>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
Length = 964
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = -2
Query: 188 VWHSRPGHLGPEKLKFLSISIPMSNVKD-SVCHICPLAKQKRLSFSVSDNIASAHFDLIH 12
+WH R GHLG E L L+ S + ++ SVCH C L + RL F+ S A+++FDLIH
Sbjct: 697 LWHHRLGHLGSEALTRLARSSVIPPYRELSVCHACQLGRHCRLPFNTSFTRATSNFDLIH 756
Query: 11 CDI 3
CD+
Sbjct: 757 CDL 759