BLASTX nr result

ID: Mentha26_contig00050463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00050463
         (341 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...    84   2e-14
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...    69   7e-10

>ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 414

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 42/57 (73%), Positives = 45/57 (78%)
 Frame = -3

Query: 228 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFQREEDGLFTFHLMVRGELK 58
           QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFF +   G    H+   G+ K
Sbjct: 132 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFXKR--GGRVIHISFDGQRK 186


>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 399

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/57 (57%), Positives = 38/57 (66%)
 Frame = -3

Query: 228 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFQREEDGLFTFHLMVRGELK 58
           QVIEF S SYKIID +DIVIWRRQNCFKHRQN K   F+ +       H+   G+ K
Sbjct: 115 QVIEFGSFSYKIIDPKDIVIWRRQNCFKHRQNTKLSLFRFKRGKTRVIHISFDGQRK 171


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