BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00049986
         (521 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]   130   8e-43
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus...    98   2e-33
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...    77   1e-25
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme...    79   6e-25
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...    62   2e-19
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...    62   2e-19
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...    61   2e-18
ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, par...    60   2e-16
gb|EXB59778.1| NADP-dependent malic enzyme [Morus notabilis]           56   7e-16
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...    54   2e-15
gb|EYU40508.1| hypothetical protein MIMGU_mgv1a0199441mg, partia...    67   3e-15
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ...    64   4e-15
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr...    53   1e-14
gb|EMT15751.1| hypothetical protein F775_21991 [Aegilops tauschii]     59   7e-14
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...    80   4e-13
ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polyme...    50   8e-13
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid...    55   4e-12
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]             55   4e-12
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...    75   7e-12
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr...    62   1e-10

>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
          Length = 898

 Score =  130 bits (328), Expect(2) = 8e-43
 Identities = 75/142 (52%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
 Frame = -2

Query: 520 SPSAF-PNTARNAQSLYSSSSNLQRTGFQSICHQLSFEEKAQESRSSAPSLSREHKKMAE 344
           SPS+  PN ARN +SL SS SNLQ TGFQ+I  QLSFE++A ESR+             E
Sbjct: 105 SPSSISPNVARNGESLQSSLSNLQGTGFQNISCQLSFEDEALESRN-------------E 151

Query: 343 PTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFETNIWN 164
              IS QLL L+KLEFRKLFLLLSY   Q LEDVLT ++AN++Y    LPM +FE  IW+
Sbjct: 152 SMAISPQLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPEFERLIWD 211

Query: 163 RYGHKFCEQPDRIQILIGIMGK 98
           ++G+++C   DR Q L    GK
Sbjct: 212 KFGYRYCNGLDRSQHLDWDSGK 233



 Score = 68.9 bits (167), Expect(2) = 8e-43
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD GKTHIY C+V+ DG Y FKGP+L+SSRTHLQRSL
Sbjct: 227 LDWDSGKTHIYNCHVNPDGSYSFKGPYLNSSRTHLQRSL 265


>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
          Length = 878

 Score = 98.2 bits (243), Expect(2) = 2e-33
 Identities = 48/91 (52%), Positives = 62/91 (68%)
 Frame = -2

Query: 370 SREHKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPM 191
           SR      +P TI+ QL+ L+KLE+RKLFL+LSY  R+ LEDV+TV+DA+EIYRM   PM
Sbjct: 52  SRHSSTQKKPITITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPM 111

Query: 190 TDFETNIWNRYGHKFCEQPDRIQILIGIMGK 98
             FE  IW +YG +F ++ DR Q L    GK
Sbjct: 112 QAFENKIWKKYGQRFYDESDRSQYLDWDSGK 142



 Score = 70.1 bits (170), Expect(2) = 2e-33
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD GKTH+YYC+V  DGRY FKGP+L+S +THLQRSL
Sbjct: 136 LDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSL 174


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 1110

 Score = 77.4 bits (189), Expect(2) = 1e-25
 Identities = 43/88 (48%), Positives = 55/88 (62%)
 Frame = -2

Query: 379 PSLSREHKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGG 200
           PS  R+    A    IS QLL LSKLEFRK FL+L+Y  R+ +EDV+ + D  +I  M  
Sbjct: 228 PSTFRDR---ASTRGISEQLLALSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIY 284

Query: 199 LPMTDFETNIWNRYGHKFCEQPDRIQIL 116
            PM+ FE+ IWN+YGH  CE   R+Q L
Sbjct: 285 QPMSHFESYIWNKYGH-LCEHNKRVQYL 311



 Score = 64.7 bits (156), Expect(2) = 1e-25
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD G+TH+Y+C+V  DG Y FKGP+L + RTHLQ+SL
Sbjct: 311 LDWDSGRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSL 349


>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 759

 Score = 78.6 bits (192), Expect(2) = 6e-25
 Identities = 43/88 (48%), Positives = 57/88 (64%)
 Frame = -2

Query: 379 PSLSREHKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGG 200
           PS S+  +  A    IS QLL L+KLEFRK FL+L+Y  R+ +EDV+T+ D  +I  M  
Sbjct: 170 PSPSK-FRDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILDMIY 228

Query: 199 LPMTDFETNIWNRYGHKFCEQPDRIQIL 116
            PM+ FE+ IWN+YGH  CE   R+Q L
Sbjct: 229 QPMSHFESYIWNKYGH-LCEHNKRVQYL 255



 Score = 61.2 bits (147), Expect(2) = 6e-25
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD G+TH+Y+C+V  D  Y FKGP+L + RTHLQ SL
Sbjct: 255 LDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSL 293


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334279|gb|ERP58266.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score = 62.0 bits (149), Expect(2) = 2e-19
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD GKTHIY+C+VD DG Y FKGP+LS  R  LQR+L
Sbjct: 106 LDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTL 144



 Score = 59.3 bits (142), Expect(2) = 2e-19
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -2

Query: 358 KKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFE 179
           ++    +T S  L+ L +LEFRK FL+LSY   +NLE+V++VD   +I     LPM  FE
Sbjct: 27  RQRGNESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD---QIRGYKDLPMRTFE 83

Query: 178 TNIWNRYG--HKFCEQPDRIQILIGIMGK 98
           + IW  +G    + ++ DR++ L    GK
Sbjct: 84  SKIWEAFGCRRDYIKEEDRVKYLDWDSGK 112


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
           gi|550334280|gb|ERP58267.1| hypothetical protein
           POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score = 62.0 bits (149), Expect(2) = 2e-19
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD GKTHIY+C+VD DG Y FKGP+LS  R  LQR+L
Sbjct: 84  LDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTL 122



 Score = 59.3 bits (142), Expect(2) = 2e-19
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -2

Query: 358 KKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFE 179
           ++    +T S  L+ L +LEFRK FL+LSY   +NLE+V++VD   +I     LPM  FE
Sbjct: 5   RQRGNESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD---QIRGYKDLPMRTFE 61

Query: 178 TNIWNRYG--HKFCEQPDRIQILIGIMGK 98
           + IW  +G    + ++ DR++ L    GK
Sbjct: 62  SKIWEAFGCRRDYIKEEDRVKYLDWDSGK 90


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
           gi|550336519|gb|ERP59562.1| hypothetical protein
           POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score = 60.8 bits (146), Expect(2) = 2e-18
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD GK HIY+C+VD DG Y FKGP+LS  R  LQR+L
Sbjct: 84  LDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTL 122



 Score = 57.0 bits (136), Expect(2) = 2e-18
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -2

Query: 358 KKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFE 179
           ++    +T S  L+ L +LEFRK FL+L+Y   +NLE+V++ D   +I     LPM  FE
Sbjct: 5   RQRGSESTTSQHLVALGELEFRKAFLILNYLGGKNLEEVVSAD---QIRGYKDLPMETFE 61

Query: 178 TNIWNRYG--HKFCEQPDRIQILIGIMGK 98
           + IW+ +G    + ++ DR++ L    GK
Sbjct: 62  SKIWDAFGCRRDYIKEEDRVKYLDWDSGK 90


>ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
           vulgaris] gi|561026288|gb|ESW24973.1| hypothetical
           protein PHAVU_004G1764001g, partial [Phaseolus vulgaris]
          Length = 689

 Score = 60.5 bits (145), Expect(2) = 2e-16
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           +DWD G+TH+Y CYV  DG   FKGP L S++THLQRSL
Sbjct: 175 VDWDSGRTHVYQCYVSSDGSLRFKGPILQSTQTHLQRSL 213



 Score = 50.4 bits (119), Expect(2) = 2e-16
 Identities = 33/80 (41%), Positives = 41/80 (51%)
 Frame = -2

Query: 394 SRSSAPSLSREHKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEI 215
           S SS PS          P   SS L  L ++EFRK FL LSY  R++LE+V + D    I
Sbjct: 86  STSSTPSTPLTPSP-TRPGQTSSALHALGEMEFRKAFLCLSYIGRESLENVASADC---I 141

Query: 214 YRMGGLPMTDFETNIWNRYG 155
             +  LPM  FE  IW  +G
Sbjct: 142 RSLKDLPMATFEKTIWEAFG 161


>gb|EXB59778.1| NADP-dependent malic enzyme [Morus notabilis]
          Length = 1017

 Score = 56.2 bits (134), Expect(2) = 7e-16
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = -1

Query: 116 DWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           DWD  +TH+Y+C+V  +GR+ FKGP+L  ++THLQR L
Sbjct: 199 DWDPERTHLYHCHVSTEGRFRFKGPYLDKTKTHLQREL 236



 Score = 53.1 bits (126), Expect(2) = 7e-16
 Identities = 26/63 (41%), Positives = 39/63 (61%)
 Frame = -2

Query: 313 LSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFETNIWNRYGHKFCEQP 134
           L +LEFRK FL+L+Y     L+ VL    A EI  + GL M +FE  +W+R+G ++ +  
Sbjct: 136 LGELEFRKQFLILNYIGSNELQTVLR---AEEIRNLKGLQMVEFERKLWDRFGVRYVDPQ 192

Query: 133 DRI 125
           DR+
Sbjct: 193 DRV 195


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
           max]
          Length = 988

 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = -1

Query: 116 DWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           DW+ G+TH+Y C+V  DG   FKGP L S+RTHLQ++L
Sbjct: 190 DWNSGRTHVYQCFVFPDGNLRFKGPILQSTRTHLQKTL 227



 Score = 53.5 bits (127), Expect(2) = 2e-15
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = -2

Query: 394 SRSSAPSLSREHKKMAEPT--TISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDAN 221
           S S     +R+      P   T SS L  L +LEFRK FL+LSY  R++LE+ +T  DA 
Sbjct: 97  SHSQPEPSTRQQTSPTRPPRPTPSSLLHALGELEFRKAFLILSYIGRESLENCIT--DA- 153

Query: 220 EIYRMGGLPMTDFETNIWNRYGHK-FCEQPDR 128
           +I  +  LPM  FE  IW  +G K   +Q DR
Sbjct: 154 KIRSLKDLPMAKFEKTIWEDFGEKCIYDQSDR 185


>gb|EYU40508.1| hypothetical protein MIMGU_mgv1a0199441mg, partial [Mimulus
           guttatus]
          Length = 379

 Score = 66.6 bits (161), Expect(2) = 3e-15
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           LDWD GKTHIYYC+V  DG Y FKGP L+++RTHLQRSL
Sbjct: 26  LDWDSGKTHIYYCHVCQDGGYYFKGPILNNTRTHLQRSL 64



 Score = 40.4 bits (93), Expect(2) = 3e-15
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = -2

Query: 193 MTDFETNIWNRYGHKFCEQPDRIQILIGIMGK 98
           M  FE+ IWN+YG +FC++ DRIQ L    GK
Sbjct: 1   MDVFESKIWNKYGQRFCDKADRIQYLDWDSGK 32


>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 934

 Score = 63.9 bits (154), Expect(2) = 4e-15
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
 Frame = -2

Query: 490 NAQSLYSSSSNLQRTGFQSICHQLSFEEKAQESRSSAPSLSREHKKMAEPTTISSQLLIL 311
           NA ++  SS    RT  +  C    F++ + +  + +P   R  +       I   LL L
Sbjct: 80  NAATVDGSSVQCPRTPGKKSCRL--FQDVSIDLETPSPKFLRREENGGSSKHIPP-LLAL 136

Query: 310 SKLEFRKLFLLLSYTKRQNL-EDVLTVDDANEIYRMGGLPMTDFETNIWNRYGHKFCEQP 134
            +LEF+K FLLLSY   ++L E+V++ D   EI +   LPM ++E  +WNR G ++C   
Sbjct: 137 GELEFKKAFLLLSYIGGESLVEEVISGD---EIRKWKDLPMVEYEAEVWNRLGQRYCPPK 193

Query: 133 DRIQILIGIMGK 98
           +R + L G  GK
Sbjct: 194 ERRRPLEGDSGK 205



 Score = 42.7 bits (99), Expect(2) = 4e-15
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           L+ D GKTH Y C+V  DG Y FKG  L  + THL + L
Sbjct: 199 LEGDSGKTHYYQCHVAPDGSYKFKGYLLEDTGTHLHKVL 237


>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
           gi|557110064|gb|ESQ50361.1| hypothetical protein
           EUTSA_v10001897mg [Eutrema salsugineum]
          Length = 988

 Score = 52.8 bits (125), Expect(2) = 1e-14
 Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = -1

Query: 173 YLEQIWTQILRATGSYT----DLDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRS 6
           Y   +W ++ R   S T     L+WD  KTH Y C+V  DG Y FKGP L  + THL + 
Sbjct: 191 YEAAVWDRLSRLELSQTVERVSLEWDSEKTHYYQCHVASDGSYTFKGPLLEPTGTHLHKV 250

Query: 5   L 3
           L
Sbjct: 251 L 251



 Score = 52.4 bits (124), Expect(2) = 1e-14
 Identities = 41/120 (34%), Positives = 60/120 (50%)
 Frame = -2

Query: 520 SPSAFPNTARNAQSLYSSSSNLQRTGFQSICHQLSFEEKAQESRSSAPSLSREHKKMAEP 341
           S +  P  +       S  S+ ++ G  S  HQ   EE + +  + +P   R       P
Sbjct: 88  SVTGSPRLSSGGSPAKSPPSSSRKHG--SRVHQ---EEMSLDFEAPSPESLRRGDIGGSP 142

Query: 340 TTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFETNIWNR 161
             I  Q+L LS+LEF+K FLLLSY   Q+L +VL+ D   EI +   LPM  +E  +W+R
Sbjct: 143 H-IPPQILALSELEFKKAFLLLSYFPGQSLAEVLSAD---EIRQWKDLPMVAYEAAVWDR 198


>gb|EMT15751.1| hypothetical protein F775_21991 [Aegilops tauschii]
          Length = 399

 Score = 58.9 bits (141), Expect(2) = 7e-14
 Identities = 30/76 (39%), Positives = 46/76 (60%)
 Frame = -2

Query: 349 AEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFETNI 170
           A   T+S QLL L +LEF ++F++  Y   + +EDV  + + + I  +  LPM  FE  I
Sbjct: 200 ASRATVSHQLLALGELEFVQIFMIYVYLAGKKIEDVGVLHE-DYIRSLNSLPMDRFELEI 258

Query: 169 WNRYGHKFCEQPDRIQ 122
           WN++GH+F  + DR Q
Sbjct: 259 WNKFGHEFLTECDRRQ 274



 Score = 43.5 bits (101), Expect(2) = 7e-14
 Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
 Frame = -1

Query: 122 DLDWDYGKTHIYYCYVDGDGR---YVFKGPHLSSSRTHLQR 9
           +LDWD  KT +Y+C+++  G     VFKGP++ ++RT LQ+
Sbjct: 293 NLDWDPSKTRVYHCHIEQRGDSIVTVFKGPYIENARTSLQK 333


>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 911

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = -2

Query: 520 SPSAFPNTARNAQSLYSSSSNLQRTGF------QSICHQLSFEEKAQES-RSSAPSLSRE 362
           SP  FP+         S S +    GF      Q +  QLSF E+ + + R ++P+    
Sbjct: 101 SPLLFPSPEGKRVQGESPSKSKLEMGFLACASPQKVARQLSFREEPESNCRRTSPN---- 156

Query: 361 HKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDF 182
                    +S QL+IL++LEFRKLFL+LSY   + LED+++   A++I R   L MTDF
Sbjct: 157 ---------VSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQIADDIVRKKNLSMTDF 207

Query: 181 ETNIWNRYGHKFCEQPDR 128
           E+ IWN +G  +  + DR
Sbjct: 208 ESEIWNAFGKAYYAESDR 225



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = -1

Query: 164 QIWTQILRATGSYTD----LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           +IW    +A  + +D    +DW+  KTHIYYC++  +G+  FKGP+L+++RTHLQR+L
Sbjct: 210 EIWNAFGKAYYAESDRSKYVDWNCRKTHIYYCHIKQNGQCTFKGPYLNTARTHLQRAL 267


>ref|XP_004288888.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
           vesca subsp. vesca]
          Length = 1068

 Score = 50.1 bits (118), Expect(2) = 8e-13
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = -2

Query: 328 SQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDFETNIWNRYGHK 149
           + L  L +LEFRK FL+LSY     L+DV+   DA +I     LPM  FET +W+  G +
Sbjct: 226 AHLEALGELEFRKQFLILSYAGGIKLKDVI---DAEDIRNWKNLPMVKFETTVWHVLGDE 282

Query: 148 FCEQPDRI 125
              + DR+
Sbjct: 283 NVGKADRL 290



 Score = 48.9 bits (115), Expect(2) = 8e-13
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -1

Query: 122 DLDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           ++DWD G+TH Y C+V  DG Y FKGP++   R  L + L
Sbjct: 292 NVDWDSGRTHFYECHVTRDGSYTFKGPYIKHERRTLLQKL 331


>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
           gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 3;
           Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
           3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 992

 Score = 55.5 bits (132), Expect(2) = 4e-12
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 322 LLILSKLEFRKLFLLLSYTKRQNL-EDVLTVDDANEIYRMGGLPMTDFETNIWNRYGHKF 146
           LL L +LEF+K FLLLSY   ++L E+V++ D   +I +   LPM  +E  +WNR G ++
Sbjct: 140 LLALGELEFKKAFLLLSYIGGESLVEEVISGD---QIRKWKDLPMVSYEAAVWNRLGQRY 196

Query: 145 CEQPDRIQILIGIMG 101
           C   +R + L G  G
Sbjct: 197 CSPKERRRPLEGDSG 211



 Score = 41.2 bits (95), Expect(2) = 4e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           L+ D G TH Y C+V  DG Y FKG  L ++ THL + L
Sbjct: 206 LEGDSGMTHYYQCHVATDGSYKFKGHLLENTGTHLHKVL 244


>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
          Length = 966

 Score = 55.5 bits (132), Expect(2) = 4e-12
 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -2

Query: 322 LLILSKLEFRKLFLLLSYTKRQNL-EDVLTVDDANEIYRMGGLPMTDFETNIWNRYGHKF 146
           LL L +LEF+K FLLLSY   ++L E+V++ D   +I +   LPM  +E  +WNR G ++
Sbjct: 140 LLALGELEFKKAFLLLSYIGGESLVEEVISGD---QIRKWKDLPMVSYEAAVWNRLGQRY 196

Query: 145 CEQPDRIQILIGIMG 101
           C   +R + L G  G
Sbjct: 197 CSPKERRRPLEGDSG 211



 Score = 41.2 bits (95), Expect(2) = 4e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = -1

Query: 119 LDWDYGKTHIYYCYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           L+ D G TH Y C+V  DG Y FKG  L ++ THL + L
Sbjct: 206 LEGDSGMTHYYQCHVATDGSYKFKGHLLENTGTHLHKVL 244


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 1011

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 53/138 (38%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
 Frame = -2

Query: 520 SPSAFPNT-ARNAQSLYSSSSNLQR-----TGFQSICHQLSF-EEKAQESRSSAPSLSRE 362
           SP  FP+   +  Q   SS S L+         Q +  QLSF EE     R ++P     
Sbjct: 99  SPRLFPSPEGKRLQGESSSKSKLEMGLLACASPQKVARQLSFCEEPESNCRRTSPY---- 154

Query: 361 HKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTVDDANEIYRMGGLPMTDF 182
                    +S QL+IL++LEFRKLFL+LSY     LEDV++   A++I R   L MTDF
Sbjct: 155 ---------VSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDF 205

Query: 181 ETNIWNRYGHKFCEQPDR 128
           E+ IWN +G       DR
Sbjct: 206 ESEIWNAFGKACYAVSDR 223


>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
           gi|557110063|gb|ESQ50360.1| hypothetical protein
           EUTSA_v10001896mg [Eutrema salsugineum]
          Length = 988

 Score = 61.6 bits (148), Expect(2) = 1e-10
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = -2

Query: 409 EKAQESRSSAPSL-SREHKKMAEPTTISSQLLILSKLEFRKLFLLLSYTKRQNLEDVLTV 233
           E + +S S +P L  RE K +++    S QLL L +LEF+K FLLLSY   ++L +V   
Sbjct: 107 EMSLDSESPSPKLLKREDKGVSK---YSPQLLALGELEFKKAFLLLSYIPGKSLAEVTIT 163

Query: 232 DDANEIYRMGGLPMTDFETNIWNRYGHKFCEQPDR 128
             A+EI ++  LPM  +E  +W+R+G + C   +R
Sbjct: 164 --ADEIRQLKDLPMVAYEAAVWHRFGQQCCSPKER 196



 Score = 30.0 bits (66), Expect(2) = 1e-10
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 83  CYVDGDGRYVFKGPHLSSSRTHLQRSL 3
           C+V  DG Y  KGP + ++ THL + L
Sbjct: 199 CHVAADGSYRLKGPLMENTGTHLHKVL 225