BLASTX nr result

ID: Mentha26_contig00049966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00049966
         (383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    59   7e-07
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    59   7e-07
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...    58   1e-06
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...    56   6e-06

>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -2

Query: 196 KSCLARASDLKLAIHEEMPLIVLWYKENLFSTNDLE-SLSPSISSVLQDFDDVFPEDTPP 20
           +S   +A +   A  E +P+I+L YKE L +   L  SL  S+SS+LQ+F+DVFP+DTP 
Sbjct: 622 ESLYIKAKECLNARREGLPIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPK 681

Query: 19  GLPPI 5
           GLPP+
Sbjct: 682 GLPPL 686


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -2

Query: 196 KSCLARASDLKLAIHEEMPLIVLWYKENLFSTNDLE-SLSPSISSVLQDFDDVFPEDTPP 20
           +S   +A +   A  E +P+I+L YKE L +   L  SL  S+SS+LQ+F+DVFP+DTP 
Sbjct: 622 ESLYIKAKECLNARREGLPIILLTYKEILINFEQLTPSLPNSVSSLLQNFEDVFPDDTPK 681

Query: 19  GLPPI 5
           GLPP+
Sbjct: 682 GLPPL 686


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = -2

Query: 199 QKSCLARASDLKLAIHEEMPLIVLWYKENLFSTNDLE-SLSPSISSVLQDFDDVFPEDTP 23
           Q +  A+ S++K A   + P++VL  KE    TN+L  SL  +I ++LQD+DDVFP   P
Sbjct: 373 QVNLFAKESEVKRAFFSKQPIVVLLCKEACLHTNELNFSLPSAIVTLLQDYDDVFPNKVP 432

Query: 22  PGLPPI 5
            GLPPI
Sbjct: 433 NGLPPI 438


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -2

Query: 199 QKSCLARASDLKLAIHEEMPLIVLWYKENLFSTNDLESLSPS-ISSVLQDFDDVFPEDTP 23
           Q +  A++ ++K A   + P+++  +KE L S  +   + PS ++S+LQD+ DVFPED P
Sbjct: 365 QPNFFAKSGEVKSAYSSKQPMLLFVFKEALTSLTNFAPVLPSEMTSLLQDYKDVFPEDNP 424

Query: 22  PGLPPI 5
            GLPPI
Sbjct: 425 KGLPPI 430


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