BLASTX nr result
ID: Mentha26_contig00049235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00049235
(423 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 68 7e-15
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 69 3e-14
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 67 9e-14
emb|CAN76658.1| hypothetical protein VITISV_025162 [Vitis vinifera] 63 1e-13
ref|XP_003524766.2| PREDICTED: uncharacterized protein LOC100820... 63 8e-13
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 67 1e-12
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 64 2e-12
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 69 3e-12
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 75 7e-12
emb|CBI24911.3| unnamed protein product [Vitis vinifera] 60 1e-11
ref|XP_002278097.1| PREDICTED: uncharacterized protein LOC100260... 60 1e-11
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 57 1e-11
dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana] 63 1e-11
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera] 74 2e-11
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 62 5e-11
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 66 8e-11
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera] 58 1e-10
emb|CAN61222.1| hypothetical protein VITISV_034850 [Vitis vinifera] 61 2e-10
gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa] 61 4e-10
gb|AAD41974.1| putative retroelement pol polyprotein [Arabidopsi... 67 7e-10
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 67.8 bits (164), Expect(2) = 7e-15
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 209 LATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMG 388
+ +V LS D+ L VLFVP F YNLLSVS+ + + ++ FT +C+ Q+ S+GKMIG G
Sbjct: 322 VGSVILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACIIQEPSRGKMIGKG 381
Query: 389 HRVGNLYVLD 418
R G LY LD
Sbjct: 382 SRKGQLYQLD 391
Score = 38.1 bits (87), Expect(2) = 7e-15
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 70 VKHSSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
+++ W++D+ ATHHVC DI VTLP V I R G
Sbjct: 276 IQNKGWIIDSGATHHVCNDISLFDSSIDVQNVRVTLPTGITVPIDRVG 323
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 68.9 bits (167), Expect(2) = 3e-14
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2
Query: 203 SELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIG 382
S + V+L+ + LH VL++P F NLLS+SSL S V F +SC QD +KG IG
Sbjct: 430 SGVGIVQLNEHITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIG 489
Query: 383 MGHRVGNLYVLD 418
G RV NLYVLD
Sbjct: 490 QGRRVANLYVLD 501
Score = 34.7 bits (78), Expect(2) = 3e-14
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 76 HSSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTGYCQ 222
+ +W++D+ ATHHVC D V LPN V I G Q
Sbjct: 388 NETWIIDSGATHHVCHDRSMYTSIDITTTSNVNLPNGMIVKISGVGIVQ 436
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 66.6 bits (161), Expect(2) = 9e-14
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 209 LATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMG 388
+ +V LS D+ L VLFVP F YNLLSVS+ + + ++ FT +C+ Q S+GKMIG G
Sbjct: 321 VGSVILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACIIQXPSRGKMIGKG 380
Query: 389 HRVGNLYVLD 418
R G LY LD
Sbjct: 381 SRKGQLYQLD 390
Score = 35.4 bits (80), Expect(2) = 9e-14
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 70 VKHSSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
+++ W++D+ ATHHVC I VTLP V I R G
Sbjct: 275 IQNKGWIIDSGATHHVCNXISLFDSSIXVQNVRVTLPTGITVPIDRVG 322
>emb|CAN76658.1| hypothetical protein VITISV_025162 [Vitis vinifera]
Length = 645
Score = 62.8 bits (151), Expect(2) = 1e-13
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 203 SELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIG 382
+ + ++ L LV+ VL+V F +NL S+S+L +C+V F S SC+ QD + KMIG
Sbjct: 349 NRIGSIELFTGLVVDDVLYVLQFRFNLFSISALTQFHHCSVHFLSESCLIQDRMQEKMIG 408
Query: 383 MGHRVGNLYVLD 418
MG NLY+LD
Sbjct: 409 MGSCFXNLYILD 420
Score = 38.9 bits (89), Expect(2) = 1e-13
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
+SW++DT ATHHVC + VTLPN V I R G
Sbjct: 308 NSWVLDTGATHHVCISLHLFKTSLLSRNSNVTLPNGHFVPINRIG 352
>ref|XP_003524766.2| PREDICTED: uncharacterized protein LOC100820019 isoform X1 [Glycine
max] gi|571455200|ref|XP_006580017.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X2 [Glycine
max] gi|571455202|ref|XP_006580018.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X3 [Glycine
max] gi|571455204|ref|XP_006580019.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X4 [Glycine
max]
Length = 495
Score = 63.2 bits (152), Expect(2) = 8e-13
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGM 385
TV LS + L VL++P FT+NL+S+S L+SS NC + F+STSC+ QD+S IG+
Sbjct: 437 TVHLSRTITLFNVLYIPTFTFNLISISKLVSSTNCALIFSSTSCMLQDASNRMKIGI 493
Score = 35.8 bits (81), Expect(2) = 8e-13
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
SSW++D+ AT HV C + V LPN VH +G
Sbjct: 392 SSWILDSGATDHVTCSLNNLHSYERINPVTVMLPNGNHVHATHSG 436
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 67.4 bits (163), Expect(2) = 1e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 203 SELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIG 382
S + TV ++ D++L VLF+P F NL+S+SSL + V F + C QD +KG +G
Sbjct: 481 SGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLG 540
Query: 383 MGHRVGNLYVLDS 421
G R+GNLYVLD+
Sbjct: 541 EGKRIGNLYVLDT 553
Score = 31.2 bits (69), Expect(2) = 1e-12
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
+W++D+ ATHHV D FV LP V I G
Sbjct: 441 TWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVG 484
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 63.9 bits (154), Expect(2) = 2e-12
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +2
Query: 218 VRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHRV 397
++L+ L LH VLF+P F +NLLSVS L + V FTS C+ Q +K M+G G +V
Sbjct: 465 IQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQV 524
Query: 398 GNLYVLD 418
GNLY+L+
Sbjct: 525 GNLYILN 531
Score = 33.9 bits (76), Expect(2) = 2e-12
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTGYCQ 222
+W++D+ A+HHV + FV LPN V I TG+ Q
Sbjct: 420 AWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQ 466
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 69.3 bits (168), Expect(2) = 3e-12
Identities = 34/72 (47%), Positives = 46/72 (63%)
Frame = +2
Query: 203 SELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIG 382
S + T++L+ D++L VLF+P F NL+S+SSL V F SC QD KG+M+G
Sbjct: 470 SGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLG 529
Query: 383 MGHRVGNLYVLD 418
G RV NLY+LD
Sbjct: 530 QGRRVANLYLLD 541
Score = 27.7 bits (60), Expect(2) = 3e-12
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
++W++D+ ATHHV D V LP V I G
Sbjct: 429 ATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVG 473
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHR 394
+V L L+L+ VLF+P F +NLLSVSSL S C + F TSCV QD+++ M+GMG +
Sbjct: 316 SVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQ 375
Query: 395 VGNLYVLD 418
V NLY++D
Sbjct: 376 VANLYIVD 383
>emb|CBI24911.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 59.7 bits (143), Expect(2) = 1e-11
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHR 394
+VRL DL L VLFVP F NLLS+S+L V F S V +D ++G+ IG+G +
Sbjct: 283 SVRLCNDLTLQNVLFVPQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQ 342
Query: 395 VGNLYVLD 418
NLY LD
Sbjct: 343 ANNLYTLD 350
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
S W++D+ ATHHVC FV LPN V + TG
Sbjct: 238 SLWILDSGATHHVCYSRASFEPFTPTFNSFVALPNGHTVPVGGTG 282
>ref|XP_002278097.1| PREDICTED: uncharacterized protein LOC100260149 [Vitis vinifera]
Length = 359
Score = 59.7 bits (143), Expect(2) = 1e-11
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHR 394
+VRL DL L VLFVP F NLLS+S+L V F S V +D ++G+ IG+G +
Sbjct: 283 SVRLCNDLTLQNVLFVPQFHCNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQ 342
Query: 395 VGNLYVLD 418
NLY LD
Sbjct: 343 ANNLYTLD 350
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
S W++D+ ATHHVC FV LPN V + TG
Sbjct: 238 SLWILDSGATHHVCYSRASFEPFTPTFNSFVALPNGHTVPVGGTG 282
>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
gi|7267797|emb|CAB81200.1| putative retrotransposon
polyprotein [Arabidopsis thaliana]
Length = 1203
Score = 57.4 bits (137), Expect(2) = 1e-11
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHR 394
T+ ++ L+LH VL VP F +NL+SV L+ + + + F + C Q+ ++G MIG G
Sbjct: 142 TICITSTLILHNVLLVPDFKFNLISVCCLVKTLSYSAHFFADCCYIQELTRGLMIGRGKT 201
Query: 395 VGNLYVLDS 421
NLY+L++
Sbjct: 202 YNNLYILET 210
Score = 37.4 bits (85), Expect(2) = 1e-11
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
+W++D+ A+ HVC D+ VTLPN +V I TG
Sbjct: 98 AWIIDSGASSHVCSDLTMFRELIHVSGVTVTLPNGTRVAITHTG 141
>dbj|BAF00783.1| hypothetical protein [Arabidopsis thaliana]
Length = 556
Score = 62.8 bits (151), Expect(2) = 1e-11
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +2
Query: 209 LATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMG 388
+ TV+L+ LVL+ VL++P F NLL VS L V F C+ QD KG MIG G
Sbjct: 431 IGTVKLNEFLVLNNVLYIPDFRLNLLCVSQLTKDLGYRVTFDEDYCLIQDHVKGLMIGRG 490
Query: 389 HRVGNLYVLD 418
++ NLYVLD
Sbjct: 491 EQINNLYVLD 500
Score = 32.0 bits (71), Expect(2) = 1e-11
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
+W++D+ ATHHVC D VTLP V I G
Sbjct: 389 TWIIDSGATHHVCHDKNLLMRLSETMNSSVTLPTGFGVKITCIG 432
>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
Length = 1031
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +2
Query: 182 TTKKYIFSELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDS 361
T K + + T+ LS LVL VL++P F +NL+S+S+L + + FT+ C QD
Sbjct: 406 TGTKIPITGIGTIHLSPHLVLEHVLYIPTFQFNLISISALTQTNCFSFDFTAHFCFIQDH 465
Query: 362 SKGKMIGMGHRVGNLYVLDS 421
S+GK+IGMG R GNLY+LDS
Sbjct: 466 SQGKLIGMGRRQGNLYLLDS 485
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 62.0 bits (149), Expect(2) = 5e-11
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +2
Query: 209 LATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMG 388
+ ++L+ +L L VL++P F NLLSVS C + F CV QD K + IG G
Sbjct: 487 IGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRG 546
Query: 389 HRVGNLYVLDS 421
+++G LYVLD+
Sbjct: 547 NQIGGLYVLDT 557
Score = 30.8 bits (68), Expect(2) = 5e-11
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
++W++D+ ATHHV D VTLP V I G
Sbjct: 444 NTWIIDSGATHHVSYDRNLFESLSDGLSNEVTLPTGSNVKIAGIG 488
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 65.9 bits (159), Expect(2) = 8e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHR 394
TV ++ L+LH VL VP F +NL+SVSSL+ + +C+ F C+ Q+ S+G MIG G
Sbjct: 508 TVHITQKLILHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGRL 567
Query: 395 VGNLYVLDS 421
NLY+L++
Sbjct: 568 YHNLYILET 576
Score = 26.2 bits (56), Expect(2) = 8e-11
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDI 129
+W++D+ A+ HVC D+
Sbjct: 481 AWIIDSGASSHVCSDL 496
>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
Length = 685
Score = 57.8 bits (138), Expect(2) = 1e-10
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 197 IFSELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKM 376
+ ++ +VRLS ++ L VL+VP F NLLSVS L +C VQF S C QD ++ K+
Sbjct: 389 VATQSGSVRLSNNITLKNVLYVPKFNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHTR-KL 447
Query: 377 IGMGHRVGNLY 409
IG G R LY
Sbjct: 448 IGTGVRRDGLY 458
Score = 33.9 bits (76), Expect(2) = 1e-10
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
SW++DT ATHHV D+ V LPN + V ++G
Sbjct: 351 SWIIDTGATHHVTGDLSWLFDTIALFECPVGLPNGESVVATQSG 394
>emb|CAN61222.1| hypothetical protein VITISV_034850 [Vitis vinifera]
Length = 247
Score = 61.2 bits (147), Expect(2) = 2e-10
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = +2
Query: 215 TVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIGMGHR 394
+VRL DL L VLFVP F +NLLS+S+L V F S V +D ++G+ IG+G +
Sbjct: 171 SVRLCNDLTLQNVLFVPQFHWNLLSISALTQQHPYVVSFHSDHYVIEDPTQGRKIGIGRQ 230
Query: 395 VGNLYVLD 418
NLY LD
Sbjct: 231 ANNLYTLD 238
Score = 29.6 bits (65), Expect(2) = 2e-10
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 79 SSWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHILRTG 213
S W++D+ ATHHVC V LPN V + TG
Sbjct: 127 SLWILDSGATHHVCYS-QASFEPFVPTYYSVALPNGHTVSVHGTG 170
>gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]
Length = 937
Score = 61.2 bits (147), Expect(2) = 4e-10
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = +2
Query: 203 SELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIG 382
S + ++L+ ++L VLF+P F NL+SVSSL V F SC QD KG MI
Sbjct: 391 SGVENIQLNKYILLRNVLFIPEFRLNLISVSSLNDDLGSRVIFDPASCEIQDRIKGLMIE 450
Query: 383 MGHRVGNLYVLDS 421
G RV NLYVLD+
Sbjct: 451 KGRRVANLYVLDT 463
Score = 28.5 bits (62), Expect(2) = 4e-10
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 82 SWLVDTSATHHVCCDIXXXXXXXXXXXXFVTLPNNQKVHI 201
+W++D+ ATHHV DI V +P + I
Sbjct: 351 TWVIDSGATHHVSHDISLFMNLDTNIKSTVNMPTGNTIKI 390
>gb|AAD41974.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1100
Score = 66.6 bits (161), Expect(2) = 7e-10
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +2
Query: 203 SELATVRLSFDLVLHFVLFVPYFTYNLLSVSSLISSANCTVQFTSTSCVFQDSSKGKMIG 382
S + T+RL+ D +L VLF+P F NL+S+SSL V F +C QD KG+M+G
Sbjct: 405 SGVGTLRLNDDNLLKNVLFIPEFCLNLMSISSLTDDIGSRVIFNQHACEIQDLIKGRMLG 464
Query: 383 MGHRVGNLYVLD 418
G RV NLYV+D
Sbjct: 465 HGRRVANLYVMD 476
Score = 22.3 bits (46), Expect(2) = 7e-10
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +1
Query: 82 SWLVDTSATHHV 117
+W++D+ A HHV
Sbjct: 369 TWVIDSGAIHHV 380