BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00048267
         (692 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC88796.1| putative coat protein [Nicotiana tabacum]              82   2e-13
emb|CAC88802.1| putative coat protein [Nicotiana tabacum]              82   2e-13
emb|CAC88783.1| putative coat protein [Nicotiana tabacum]              82   2e-13
emb|CAB42620.1| putative coat protein [Nicotiana tabacum]              82   2e-13
ref|NP_569139.1| putative coat protein [Tobacco vein clearing vi...    81   4e-13
emb|CAC88811.1| putative coat protein [Nicotiana tabacum]              59   2e-06
ref|YP_004300272.1| coat protein [Sweet potato vein clearing vir...    55   3e-06

>emb|CAC88796.1| putative coat protein [Nicotiana tabacum]
          Length = 594

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
 Frame = +3

Query: 3   GSVKLFLNNLNSEEKEILKNNVDFENKPITSSTDMLXXXXXXXXXXXXNLNADTEQEEQE 182
           G+VKL+L NL+SE  + L++N   +    T+ TD+L            ++  + E++ +E
Sbjct: 290 GTVKLWLQNLSSESLDTLRSNKKLDGTTTTTVTDILNKYEIAIRNEFSSMTTEVEEQNKE 349

Query: 183 KINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQLLYDNLPNSINIQ 356
           KI   N++ ++ + +MC  Y+ +Y  AF   YYK   + D  K +++L +  LP   + +
Sbjct: 350 KITNRNLMTKLAICNMC--YIDEYTCAFRDYYYKGTYSPDESKEIRKLYFTKLPEPFSSK 407

Query: 357 VTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVD--YCCAAYDPPKFG 530
           +   +++    +TLG RI FL   +   C++  YK+ +  +   V    CC +   P+FG
Sbjct: 408 IIKSWNEAGLADTLGVRIKFLQNWFIELCEK--YKENMKMEKILVKNLACCKSRIAPQFG 465


>emb|CAC88802.1| putative coat protein [Nicotiana tabacum]
          Length = 594

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
 Frame = +3

Query: 3   GSVKLFLNNLNSEEKEILKNNVDFENKPITSSTDMLXXXXXXXXXXXXNLNADTEQEEQE 182
           G+VKL+L NL+SE  + L++N   +    T+ TD+L            ++  + E++ +E
Sbjct: 290 GTVKLWLQNLSSESLDTLRSNKKLDGTTTTTVTDILNKYEIAIRNEFSSMTTEVEEQNKE 349

Query: 183 KINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQLLYDNLPNSINIQ 356
           KI   N++ ++ + +MC  Y+ +Y  AF   YYK   + D  K +++L +  LP   + +
Sbjct: 350 KITNRNLMTKLAICNMC--YIDEYTCAFRDYYYKGTYSPDESKEIRKLYFTKLPEPFSSK 407

Query: 357 VTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVD--YCCAAYDPPKFG 530
           +   +++    +TLG RI FL   +   C++  YK+ +  +   V    CC +   P+FG
Sbjct: 408 IIKSWNEAGLADTLGVRIKFLQNWFIELCEK--YKENMKMEKILVKNLACCKSRIAPQFG 465


>emb|CAC88783.1| putative coat protein [Nicotiana tabacum]
          Length = 598

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
 Frame = +3

Query: 3   GSVKLFLNNLNSEEKEILKNNVDFENKPITSSTDMLXXXXXXXXXXXXNLNADTEQEEQE 182
           G+VKL+L NL+SE  + L++N   +    T+ TD+L            ++  + E++ +E
Sbjct: 294 GTVKLWLQNLSSESLDTLRSNKKLDGTTTTTVTDILNKYEIAIRNEFSSMTTEVEEQNKE 353

Query: 183 KINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQLLYDNLPNSINIQ 356
           KI   N++ ++ + +MC  Y+ +Y  AF   YYK   + D  K +++L +  LP   + +
Sbjct: 354 KITNRNLMTKLAICNMC--YIDEYTCAFRDYYYKGTYSPDESKEIRKLYFTKLPEPFSSK 411

Query: 357 VTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVD--YCCAAYDPPKFG 530
           +   +++    +TLG RI FL   +   C++  YK+ +  +   V    CC +   P+FG
Sbjct: 412 IIKSWNEAGLADTLGVRIKFLQNWFIELCEK--YKENMKMEKILVKNLACCKSRIAPQFG 469


>emb|CAB42620.1| putative coat protein [Nicotiana tabacum]
          Length = 598

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
 Frame = +3

Query: 3   GSVKLFLNNLNSEEKEILKNNVDFENKPITSSTDMLXXXXXXXXXXXXNLNADTEQEEQE 182
           G+VKL+L NL+SE  + L++N   +    T+ TD+L            ++  + E++ +E
Sbjct: 294 GTVKLWLQNLSSESLDTLRSNKKLDGTTTTTVTDILNKYEIAIRNEFSSMTTEVEEQNKE 353

Query: 183 KINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQLLYDNLPNSINIQ 356
           KI   N++ ++ + +MC  Y+ +Y  AF   YYK   + D  K +++L +  LP   + +
Sbjct: 354 KITNRNLMTKLAICNMC--YIDEYTCAFRDYYYKGTYSPDESKEIRKLYFTKLPEPFSSK 411

Query: 357 VTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVD--YCCAAYDPPKFG 530
           +   +++    +TLG RI FL   +   C++  YK+ +  +   V    CC +   P+FG
Sbjct: 412 IIKSWNEAGLADTLGVRIKFLQNWFIELCEK--YKENMKMEKILVKNLACCKSRIAPQFG 469


>ref|NP_569139.1| putative coat protein [Tobacco vein clearing virus]
           gi|6425073|gb|AAF08287.1|AF190123_1 putative coat
           protein [Tobacco vein clearing virus]
          Length = 579

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 49/180 (27%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
 Frame = +3

Query: 3   GSVKLFLNNLNSEEKEILKNNVDFENKPITSSTDMLXXXXXXXXXXXXNLNADTEQEEQE 182
           G+VKL+L+NL  E  + L++N  F     T+S ++L            ++  +TE++ +E
Sbjct: 281 GTVKLWLHNLTKESIDTLRSNKKFNGDMATTSMEILYKYEIAIRNEFSSMTTETEEQHKE 340

Query: 183 KINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQLLYDNLPNSINIQ 356
           K    N++ ++ + +MC  Y+ +Y  AF   YYK    T+  + +++L +  LP   + +
Sbjct: 341 KQINRNLMTKLAICNMC--YIDEYTCAFREYYYKGTYNTEEGREIRKLYFTKLPEPFSSK 398

Query: 357 VTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVD--YCCAAYDPPKFG 530
           +  D+++   T+TLG RI FL   +   C++  YK+ +  +   +    CC     P+FG
Sbjct: 399 IIKDWNEAGLTDTLGARIKFLQQWFVQLCEK--YKEEIKMEKILIKNLKCCKNKTAPQFG 456


>emb|CAC88811.1| putative coat protein [Nicotiana tabacum]
          Length = 269

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
 Frame = +3

Query: 147 NLNADTEQEEQEKINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQL 320
           ++  + E++ +EKI   N++ ++ + +MC  Y+ +Y  AF   YYK   + D  K +++L
Sbjct: 13  SMTTEVEEQNKEKITNRNLMTKLAICNMC--YIDEYTCAFRDYYYKGTYSPDESKEIRKL 70

Query: 321 LYDNLPNSINIQVTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVD-- 494
            +  LP   + ++   +++    +TLG RI FL   +   C++  YK+ +  +   V   
Sbjct: 71  YFTKLPEPFSSKIIKSWNEAGLADTLGVRIKFLQNWFIELCEK--YKENMKMEKILVKNL 128

Query: 495 YCCAAYDPPKFG 530
            CC +   P+FG
Sbjct: 129 ACCKSRIAPQFG 140


>ref|YP_004300272.1| coat protein [Sweet potato vein clearing virus]
           gi|325698379|gb|ADZ45062.1| coat protein [Sweet potato
           vein clearing virus]
          Length = 650

 Score = 55.5 bits (132), Expect(2) = 3e-06
 Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
 Frame = +3

Query: 3   GSVKLFLNNLNSEEKEILKNNVDFENKPITSSTDMLXXXXXXXXXXXXNLNADTEQEEQE 182
           G+V+ +   L+ + K  L+       K    + D+L            +  ++  ++  E
Sbjct: 370 GNVRTWFLQLSDDVKLSLR-------KSEPGAMDILVKYELLIRSEFSSATSEANKKYGE 422

Query: 183 KINVLNMLKQMKLYSMCPKYLKQYVYAFNINYYKVKNTTD--KNLKQLLYDNLPNSINIQ 356
           ++     L Q+ + ++C  Y+ +Y  AF+  YY    + +    +++LL++ +P     Q
Sbjct: 423 QLKNRIFLNQLAICNLC--YINEYCCAFSKYYYNSGYSEEDRSEIRKLLFNKIPEPFGTQ 480

Query: 357 VTSDYDKIIKTNTLGERISFLYT*YKTYCDQRVYKKLLNQQMRQVDYCCAAYDPPKFG 530
           +T  + +  KT+TLG RI+FL   Y   C +   +  + ++++    CC    PP++G
Sbjct: 481 ITQLWLENQKTDTLGNRIAFLKDWYIDMCLEYKNRSKIKKEIKFSRKCCKEVLPPEYG 538



 Score = 22.3 bits (46), Expect(2) = 3e-06
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
 Frame = +1

Query: 562 KNIRNIESIKSYEIINMLKKYRKPM------YVKRKNYKKLTVNPKICR 690
           + IR     K+   + +  K R P       Y  RKNY +    PK C+
Sbjct: 547 RKIRKRVKRKNPRYVKIKYKDRNPKFKHFIKYKNRKNYARYKKKPKDCK 595