BLASTX nr result
ID: Mentha26_contig00047449
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00047449
(402 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 78 1e-12
ref|XP_006427872.1| hypothetical protein CICLE_v10025964mg [Citr... 78 1e-12
ref|XP_006427871.1| hypothetical protein CICLE_v10025964mg [Citr... 78 1e-12
ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymera... 74 2e-11
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 72 1e-10
ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutr... 72 1e-10
ref|NP_568218.1| transcription elongation factor (TFIIS) family ... 71 1e-10
dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] 71 1e-10
ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp.... 71 1e-10
ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymera... 70 3e-10
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 69 5e-10
ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymera... 69 7e-10
ref|XP_007159804.1| hypothetical protein PHAVU_002G268700g [Phas... 69 9e-10
ref|XP_006578814.1| PREDICTED: probable mediator of RNA polymera... 68 1e-09
ref|XP_006578813.1| PREDICTED: probable mediator of RNA polymera... 68 1e-09
ref|XP_006578812.1| PREDICTED: probable mediator of RNA polymera... 68 1e-09
ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymera... 68 1e-09
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 68 1e-09
ref|XP_007011110.1| Transcription elongation factor (TFIIS) fami... 68 1e-09
ref|XP_007011109.1| Transcription elongation factor (TFIIS) fami... 68 1e-09
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPF-SGCENCV 335
MDLE+FRS + +GVDVWT+ID AI VAS D+ EL+ RRDKIV++LYAT S C NC
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNC- 59
Query: 336 KKSNEMGSPIVESEKNVT 389
+ G+ +V+ K ++
Sbjct: 60 ----DFGNGVVDVNKEIS 73
>ref|XP_006427872.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|557529862|gb|ESR41112.1| hypothetical protein
CICLE_v10025964mg [Citrus clementina]
Length = 286
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPF-SGCENCV 335
MDLE+FRS + +GVDVWT+ID AI VAS D+ EL+ RRDKIV++LYAT S C NC
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNC- 59
Query: 336 KKSNEMGSPIVESEKNVT 389
+ G+ +V+ K ++
Sbjct: 60 ----DFGNGVVDVNKEIS 73
>ref|XP_006427871.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|557529861|gb|ESR41111.1| hypothetical protein
CICLE_v10025964mg [Citrus clementina]
Length = 218
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPF-SGCENCV 335
MDLE+FRS + +GVDVWT+ID AI VAS D+ EL+ RRDKIV++LYAT S C NC
Sbjct: 1 MDLEDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNC- 59
Query: 336 KKSNEMGSPIVESEKNVT 389
+ G+ +V+ K ++
Sbjct: 60 ----DFGNGVVDVNKEIS 73
>ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 313
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYA-TPFSGCENCV 335
MD E+FRS + +GVDVW +D AIAVAS DH EL+ RRD+IV++LYA + C NC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNCD 60
Query: 336 KKSNEM---GSPIVESEKN 383
+ E+ SP E EK+
Sbjct: 61 PNAGEIRTQSSPSAEEEKD 79
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSG-CENC 332
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C NC
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNC 59
>ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutrema salsugineum]
gi|312281771|dbj|BAJ33751.1| unnamed protein product
[Thellungiella halophila] gi|557100558|gb|ESQ40921.1|
hypothetical protein EUTSA_v10013991mg [Eutrema
salsugineum]
Length = 348
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSG-CENC 332
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C NC
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNC 59
>ref|NP_568218.1| transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName:
Full=Probable mediator of RNA polymerase II
transcription subunit 26c gi|332004072|gb|AED91455.1|
transcription elongation factor (TFIIS) family protein
[Arabidopsis thaliana]
Length = 353
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSG-CENC 332
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNC 59
>dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSG-CENC 332
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNC 59
>ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSG-CENC 332
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNC 59
>ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 314
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYA--TPFSGCENC 332
MD E+FRS + +GVDVW +D AIAVAS+DH EL+ RRD IV++LYA +P C NC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNC 60
Query: 333 VK----KSNEMGSPIVESEKN 383
+ SP E EK+
Sbjct: 61 DAGDGGEIRTQSSPSAEEEKD 81
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYA--TPFSGCENC 332
+DL++FR+ + +GVDVWT+ID A+ VAS D+ +L+NRRD IV++LYA +P S C NC
Sbjct: 4 LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC 63
Query: 333 VKKSNEMG 356
N G
Sbjct: 64 DTDRNHDG 71
>ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cicer arietinum]
Length = 356
Score = 68.9 bits (167), Expect = 7e-10
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSG--CENC 332
MDL++FRS + +GVDVW +ID AI+VAS D+ EL+ RRD IV++LYA S C+NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDTAISVASQDNAAELKRRRDGIVERLYAATTSPPLCQNC 60
Query: 333 -------VKKSNEMGSPIVESEK 380
+ + + SP + E+
Sbjct: 61 DGGNRQNINQIKKQSSPSLSPER 83
>ref|XP_007159804.1| hypothetical protein PHAVU_002G268700g [Phaseolus vulgaris]
gi|561033219|gb|ESW31798.1| hypothetical protein
PHAVU_002G268700g [Phaseolus vulgaris]
Length = 308
Score = 68.6 bits (166), Expect = 9e-10
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYAT------PFSG 320
MD ++FRS + +G+D+W +D+AIAVAS DH ELR RRD IV++LYAT P
Sbjct: 1 MDSKDFRSILESAGIDIWMLMDVAIAVASVDHSDELRRRRDGIVERLYATSSVSSPPCPN 60
Query: 321 CENCVKKSNEMGS---PIVESEKNVTPI 395
C+ + EM S P VE EK +
Sbjct: 61 CDVDDVREIEMKSNVNPSVEEEKETCEV 88
>ref|XP_006578814.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X4 [Glycine max]
Length = 358
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFS--GCENC 332
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 333 VKKSNEMGSPIVESEKNVTP 392
+ + + ++ + +P
Sbjct: 61 DEGGHRLNGHRIKKQSRHSP 80
>ref|XP_006578813.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 364
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFS--GCENC 332
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 333 VKKSNEMGSPIVESEKNVTP 392
+ + + ++ + +P
Sbjct: 61 DEGGHRLNGHRIKKQSRHSP 80
>ref|XP_006578812.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Glycine max]
Length = 366
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFS--GCENC 332
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 333 VKKSNEMGSPIVESEKNVTP 392
+ + + ++ + +P
Sbjct: 61 DEGGHRLNGHRIKKQSRHSP 80
>ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Glycine max]
Length = 356
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFS--GCENC 332
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 333 VKKSNEMGSPIVESEKNVTP 392
+ + + ++ + +P
Sbjct: 61 DEGGHRLNGHRIKKQSRHSP 80
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPFSGCENC 332
MD +EFRS + SGVDVWT I+ A++VAS D+ E + RRD IV++LY S C NC
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNC 58
>ref|XP_007011110.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 2, partial [Theobroma cacao]
gi|508728023|gb|EOY19920.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 2,
partial [Theobroma cacao]
Length = 300
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPF-SGCENC 332
MDL++FRS + +GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C++C
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSC 59
>ref|XP_007011109.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508728022|gb|EOY19919.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 337
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATPF-SGCENC 332
MDL++FRS + +GVDVWT+ID AI VAS D+ EL+ RRD IV++LYAT + C++C
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSC 59