BLASTX nr result

ID: Mentha26_contig00046721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00046721
         (364 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS58656.1| hypothetical protein M569_16158, partial [Genlise...    64   2e-08
ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. l...    62   6e-08
ref|XP_006350584.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|NP_198856.2| pentatricopeptide repeat-containing protein [Ar...    58   1e-06
ref|XP_006282504.1| hypothetical protein CARUB_v10006941mg [Caps...    56   5e-06

>gb|EPS58656.1| hypothetical protein M569_16158, partial [Genlisea aurea]
          Length = 246

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/63 (49%), Positives = 46/63 (73%)
 Frame = -3

Query: 353 TSHKPITNPLYNFLPQSKNPNNLVALVCSSLYRKDHAALLDYLKDQGLFTRFTTLQFSTT 174
           +S+KP+ NP+++FLP+ +NP NLV+LV  SL +KD  + L+ L++QGLF RF +   S  
Sbjct: 1   SSNKPLPNPVFDFLPEIQNPCNLVSLVAPSLKQKDIFSSLNVLREQGLFHRFCSHDLSRV 60

Query: 173 LLR 165
           LLR
Sbjct: 61  LLR 63


>ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 608

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = -3

Query: 344 KPITNPLYNFLPQSKNPNNLVALVCSSLYRKDHAALLDYLKDQ--GLFTRFTTLQFSTTL 171
           KPI NPLYN LPQ++NPN +V ++CS+L  +DH+ LL  L+D+   L       + S  L
Sbjct: 25  KPILNPLYNLLPQTQNPNKIVDVICSTLNHRDHSVLLPNLRDEVKSLIPHLGYPEISRVL 84

Query: 170 LRF-LDSGRKL 141
           LRF  D+ R L
Sbjct: 85  LRFQSDASRAL 95


>ref|XP_006350584.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like isoform X1 [Solanum tuberosum]
           gi|565367885|ref|XP_006350585.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g40400-like isoform X2 [Solanum tuberosum]
           gi|565367887|ref|XP_006350586.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g40400-like isoform X3 [Solanum tuberosum]
           gi|565367889|ref|XP_006350587.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g40400-like isoform X4 [Solanum tuberosum]
           gi|565367891|ref|XP_006350588.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g40400-like isoform X5 [Solanum tuberosum]
          Length = 629

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
 Frame = -3

Query: 350 SHKPITNPLYNFLPQSKNPNNLVALVCSSLYRK--DHAALLD-YLKDQGLFTRFTTLQFS 180
           S +P +NPL+NFLP+++NP N V+L+CS+L  +  DH +LL   ++D GL + F+  + S
Sbjct: 45  SARPFSNPLHNFLPKTQNPQNTVSLICSALKNRNNDHLSLLQKTIQDNGLISYFSDSEIS 104

Query: 179 TTLLR 165
             LLR
Sbjct: 105 RVLLR 109


>ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g40400 gi|10178151|dbj|BAB11596.1| salt-inducible
           protein-like [Arabidopsis thaliana]
           gi|110742507|dbj|BAE99171.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007160|gb|AED94543.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 610

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -3

Query: 344 KPITNPLYNFLPQSKNPNNLVALVCSSLYRKDHAALLDYLKDQ--GLFTRFTTLQFSTTL 171
           KPI NPLYN LPQS+NP+ +V ++CS+L   D++ LL  L+D+   L       + S  L
Sbjct: 27  KPILNPLYNLLPQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVL 86

Query: 170 LRF 162
           LRF
Sbjct: 87  LRF 89


>ref|XP_006282504.1| hypothetical protein CARUB_v10006941mg [Capsella rubella]
           gi|482551209|gb|EOA15402.1| hypothetical protein
           CARUB_v10006941mg [Capsella rubella]
          Length = 615

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = -3

Query: 344 KPITNPLYNFLPQSKNPNNLVALVCSSLYRKDHAALLDYLKD--QGLFTRFTTLQFSTTL 171
           KPI NP YN LPQ++NPN +V ++CS+L  +DH  LL  L+   + L       + S  L
Sbjct: 28  KPIYNPFYNLLPQTQNPNKIVDVICSTLNHRDHLVLLPNLRGEVETLIPHLGYPEISRVL 87

Query: 170 LRF-LDSGRKL 141
           LRF  D+ R L
Sbjct: 88  LRFQSDASRAL 98


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