BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00046452
         (681 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU21515.1| hypothetical protein MIMGU_mgv1a000493mg [Mimulus...   263   3e-68
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ...   194   2e-47
gb|EPS68498.1| hypothetical protein M569_06270, partial [Genlise...   194   3e-47
ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair ...   190   3e-46
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              177   2e-42
ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prun...   168   2e-39
ref|XP_007024314.1| MMS19 nucleotide excision repair protein, pu...   165   1e-38
ref|XP_007024313.1| MMS19 nucleotide excision repair protein, pu...   165   1e-38
ref|XP_007024312.1| MMS19 nucleotide excision repair protein, pu...   165   1e-38
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   165   1e-38
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   164   3e-38
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   164   3e-38
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr...   162   7e-38
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu...   152   7e-35
ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304...   151   2e-34
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   148   1e-33
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]     147   3e-33
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ...   140   5e-31
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ...   140   5e-31
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ...   140   5e-31

>gb|EYU21515.1| hypothetical protein MIMGU_mgv1a000493mg [Mimulus guttatus]
          Length = 1120

 Score =  263 bits (673), Expect = 3e-68
 Identities = 138/225 (61%), Positives = 162/225 (72%)
 Frame = +3

Query: 6   TYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQSGDFISLILGDNDINVFMNS 185
           TYISP  T + ESE +GGM FQDS++M  AF+LLQEV +Q  DF+SL++ DNDI+VF+NS
Sbjct: 310 TYISPSSTPSTESESMGGMSFQDSEIMRHAFVLLQEVTRQHADFVSLVIADNDIHVFINS 369

Query: 186 LNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSN 365
           LNQYKE D IP L KQ+LH +GH+L TCAK S  LCNKVF  FFPLLM+  GLS AK S+
Sbjct: 370 LNQYKEFDDIPVLVKQKLHALGHILSTCAKPSVELCNKVFEGFFPLLMDGFGLSAAKPSD 429

Query: 366 GYLDEDCTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLV 545
                    V+  F AIYLC EL+AA R + +SLD+     DFS+QTW  MLSN  KSL 
Sbjct: 430 N--------VECKFGAIYLCTELLAASRYLTLSLDNCTLDPDFSRQTWHVMLSNFSKSLE 481

Query: 546 KGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           K F +LL   VAD   S+ VYFGVKGLQILATFPESF PVSKSIY
Sbjct: 482 KAFIALLRSNVADNAESAYVYFGVKGLQILATFPESFLPVSKSIY 526


>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog
           [Solanum tuberosum]
          Length = 1170

 Score =  194 bits (494), Expect = 2e-47
 Identities = 100/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQSGD-FISLILGDNDINVFM 179
           A +  PQ TL+++S+ + G+GF +S++M QA  LLQ +++Q  D F+SLILGD DI+ F+
Sbjct: 314 ALFTCPQSTLSEDSDPIDGLGFHESEIMTQALELLQVLVRQHNDSFLSLILGDGDISTFL 373

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
           NS +Q+ + + + +  KQRLH VGH+L  C K+S + CNKVF SFFP L++ L LSV ++
Sbjct: 374 NSFSQFDDFNSLSTQYKQRLHAVGHVLSVCIKASGSSCNKVFESFFPRLVDALRLSV-EN 432

Query: 360 SNGYLDEDCTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKS 539
           S+G +        +NF A+YLC+EL+AACR + VS D   +  D ++ +W  +L + C S
Sbjct: 433 SHGIV-HSALDANFNFGALYLCVELLAACRQLVVSSDEVASAHDLARDSWCQILRSFCTS 491

Query: 540 LVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           L   FF L+  +  +   ++ VY  VKGL+IL TFP SF  VSK +Y
Sbjct: 492 LCNVFFCLIRASCVESTWNAYVYAAVKGLEILGTFPGSFISVSKLMY 538


>gb|EPS68498.1| hypothetical protein M569_06270, partial [Genlisea aurea]
          Length = 970

 Score =  194 bits (492), Expect = 3e-47
 Identities = 103/226 (45%), Positives = 147/226 (65%), Gaps = 2/226 (0%)
 Frame = +3

Query: 9   YISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQSGDFISLILGDNDINVFMNSL 188
           Y SP  TL+ ES+    + F++SD+M+QAF LL+E+  Q+GDFI+L++ D D+NVF+NSL
Sbjct: 251 YFSPDSTLSMESQS-DALNFRESDIMIQAFALLREINLQNGDFINLVIQDGDMNVFLNSL 309

Query: 189 NQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAK-SSN 365
           NQY+E D IP   KQRLH VG +   CA++S A C+KVF  FFPLLM+ LG S  K   +
Sbjct: 310 NQYREFDDIPLKVKQRLHSVGRIFSACAETSAASCSKVFERFFPLLMDGLGFSAGKLLQD 369

Query: 366 GYLDEDC-TPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSL 542
            + DE C + +K NF A+YLC++L+ A R + +S D++ AV + +   W +ML    + +
Sbjct: 370 NHPDEACASSIKLNFGALYLCVKLLTASRYLILSTDNTPAVSNLAHHVWFSMLQIFSEPM 429

Query: 543 VKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
              F SL+     D    + +Y GVKGL+ LA FPESF PV + +Y
Sbjct: 430 AAAFASLIRF---DNLNGAFLYLGVKGLETLAAFPESFSPVPELMY 472


>ref|XP_004236399.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
            lycopersicum]
          Length = 1153

 Score =  190 bits (483), Expect = 3e-46
 Identities = 97/227 (42%), Positives = 144/227 (63%), Gaps = 1/227 (0%)
 Frame = +3

Query: 3    ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQ-SGDFISLILGDNDINVFM 179
            A + SPQ TL+++S+ + G+GF +S++M QA   LQ +++Q +  F+SLI+GD DI+ F+
Sbjct: 327  ALFTSPQSTLSEDSDPIDGLGFHESEIMTQALEFLQVLVRQHNASFLSLIMGDGDISTFL 386

Query: 180  NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
            NS +Q+   + + +  KQRLH VGH+L  C K+S + CNKVF SFFP L++ L LSV  S
Sbjct: 387  NSFSQFDNFNSLSTQYKQRLHAVGHVLSVCIKASASSCNKVFESFFPRLVDALRLSVDNS 446

Query: 360  SNGYLDEDCTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKS 539
                +        +NF A+YLC+EL+AACR + VS D   +  D ++ +W  +L +   S
Sbjct: 447  HG--IVHSAVDANFNFGALYLCVELLAACRQLVVSSDEVASAHDLARDSWCQILHSFSTS 504

Query: 540  LVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
            L   FF L+  +  +   ++ VY  VKGL+ILATFP SF  VSK +Y
Sbjct: 505  LCNVFFCLIRASCVESTRNAYVYAAVKGLEILATFPGSFISVSKLMY 551


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  177 bits (450), Expect = 2e-42
 Identities = 98/225 (43%), Positives = 140/225 (62%), Gaps = 8/225 (3%)
 Frame = +3

Query: 30  LTKESELLGGMGFQDSDVMMQAFILLQEVI-QQSGDFISLILGDNDINVFMNSLNQYKEM 206
           L+  SELL  +GFQ+++++ +A ILLQ+VI + SG  +SLI+GD DIN  +N++  ++  
Sbjct: 322 LSLASELLDHVGFQENEIVTEAIILLQKVILENSGLSLSLIVGDKDINTIVNTVTSFRSY 381

Query: 207 DQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGYLDEDC 386
           + IP   K +L  +G +L+  AK+S   CN+VF SFF  LM+ LGLSV  SS      DC
Sbjct: 382 NDIPLQSKHKLCAIGRILYVSAKASITCCNRVFESFFFRLMDTLGLSVRNSSG-----DC 436

Query: 387 TP-------VKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLV 545
            P        + NF A+YLCIEL+AACRD+ V  +   +    +Q++W  ML +    L+
Sbjct: 437 LPNFDYVFSERLNFGALYLCIELLAACRDLVVGSEELTSKSVSAQESWCCMLHSFSSLLM 496

Query: 546 KGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           K F S+L  +       +D+Y GVKGLQILATFP  F P+SKSI+
Sbjct: 497 KAFSSVLDASTDKDAYEADIYSGVKGLQILATFPGEFLPISKSIF 541


>ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
           gi|462413691|gb|EMJ18740.1| hypothetical protein
           PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  168 bits (425), Expect = 2e-39
 Identities = 95/216 (43%), Positives = 133/216 (61%), Gaps = 3/216 (1%)
 Frame = +3

Query: 42  SELLGGMGFQDSDVMMQAFILLQEV-IQQSGDFISLILGDNDINVFMNSLNQYKEMDQIP 218
           SE L G+GFQ++++  +A +LLQ+V +Q    F+SLI+ D  IN+  NS+  ++  + IP
Sbjct: 326 SEPLYGLGFQENEIATEALMLLQKVTLQNEALFLSLIIQDEGINIVFNSIASHEHYNNIP 385

Query: 219 SLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGY-LDEDCTPV 395
              KQ LH VG +L+  +K+S A CN VF SFFP LM  L +SV  S+    L+E+  P 
Sbjct: 386 LQGKQWLHAVGRILYIISKTSMASCNSVFESFFPRLMNTLEISVTNSAGDCTLNENTFPS 445

Query: 396 K-YNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFSLLSL 572
           K +NF A+YLC+ELIAACRD+ +         D  Q+T   ML +   SLV  F S L+ 
Sbjct: 446 KKFNFGALYLCVELIAACRDLIMRSKDLAPKPDTPQETCRYMLQSFADSLVNAFSSSLAT 505

Query: 573 TVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
              +    +D+YF VKGLQILATFP  F P+SK ++
Sbjct: 506 NANEVAHGADIYFKVKGLQILATFPGDFLPISKFLF 541


>ref|XP_007024314.1| MMS19 nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao] gi|508779680|gb|EOY26936.1| MMS19
           nucleotide excision repair protein, putative isoform 5
           [Theobroma cacao]
          Length = 1157

 Score =  165 bits (418), Expect = 1e-38
 Identities = 93/229 (40%), Positives = 135/229 (58%), Gaps = 3/229 (1%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQE-VIQQSGDFISLILGDNDINVFM 179
           A + S    L+   E L G+   ++++  +A  LLQ+ ++Q +  F+ LI+ D DIN+  
Sbjct: 312 AVFTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIF 371

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
           N ++ YK    IP+  KQRLH VG +L    K+S A CN+VF  FF  LM+ LGL V  S
Sbjct: 372 NMISSYKSYHGIPAQSKQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNS 431

Query: 360 SNGYLDED--CTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSC 533
           S     +D    P +YN  A+YL IEL++ACRDV  S ++  A    +++TWS +L +  
Sbjct: 432 SGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFS 491

Query: 534 KSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
            SL K F S  S+  ++    +DVYFGVKGL ILATFPE +  +SK ++
Sbjct: 492 SSLTKAFCS-ASICTSEDSHDADVYFGVKGLLILATFPEGYLLISKPVF 539


>ref|XP_007024313.1| MMS19 nucleotide excision repair protein, putative isoform 4
           [Theobroma cacao] gi|508779679|gb|EOY26935.1| MMS19
           nucleotide excision repair protein, putative isoform 4
           [Theobroma cacao]
          Length = 1136

 Score =  165 bits (418), Expect = 1e-38
 Identities = 93/229 (40%), Positives = 135/229 (58%), Gaps = 3/229 (1%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQE-VIQQSGDFISLILGDNDINVFM 179
           A + S    L+   E L G+   ++++  +A  LLQ+ ++Q +  F+ LI+ D DIN+  
Sbjct: 312 AVFTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIF 371

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
           N ++ YK    IP+  KQRLH VG +L    K+S A CN+VF  FF  LM+ LGL V  S
Sbjct: 372 NMISSYKSYHGIPAQSKQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNS 431

Query: 360 SNGYLDED--CTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSC 533
           S     +D    P +YN  A+YL IEL++ACRDV  S ++  A    +++TWS +L +  
Sbjct: 432 SGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFS 491

Query: 534 KSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
            SL K F S  S+  ++    +DVYFGVKGL ILATFPE +  +SK ++
Sbjct: 492 SSLTKAFCS-ASICTSEDSHDADVYFGVKGLLILATFPEGYLLISKPVF 539


>ref|XP_007024312.1| MMS19 nucleotide excision repair protein, putative isoform 3
           [Theobroma cacao] gi|508779678|gb|EOY26934.1| MMS19
           nucleotide excision repair protein, putative isoform 3
           [Theobroma cacao]
          Length = 1062

 Score =  165 bits (418), Expect = 1e-38
 Identities = 93/229 (40%), Positives = 135/229 (58%), Gaps = 3/229 (1%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQE-VIQQSGDFISLILGDNDINVFM 179
           A + S    L+   E L G+   ++++  +A  LLQ+ ++Q +  F+ LI+ D DIN+  
Sbjct: 312 AVFTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIF 371

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
           N ++ YK    IP+  KQRLH VG +L    K+S A CN+VF  FF  LM+ LGL V  S
Sbjct: 372 NMISSYKSYHGIPAQSKQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNS 431

Query: 360 SNGYLDED--CTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSC 533
           S     +D    P +YN  A+YL IEL++ACRDV  S ++  A    +++TWS +L +  
Sbjct: 432 SGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFS 491

Query: 534 KSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
            SL K F S  S+  ++    +DVYFGVKGL ILATFPE +  +SK ++
Sbjct: 492 SSLTKAFCS-ASICTSEDSHDADVYFGVKGLLILATFPEGYLLISKPVF 539


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
           nucleotide excision repair protein, putative isoform 1
           [Theobroma cacao]
          Length = 1149

 Score =  165 bits (418), Expect = 1e-38
 Identities = 93/229 (40%), Positives = 135/229 (58%), Gaps = 3/229 (1%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQE-VIQQSGDFISLILGDNDINVFM 179
           A + S    L+   E L G+   ++++  +A  LLQ+ ++Q +  F+ LI+ D DIN+  
Sbjct: 312 AVFTSLDGVLSFTPESLEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIF 371

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
           N ++ YK    IP+  KQRLH VG +L    K+S A CN+VF  FF  LM+ LGL V  S
Sbjct: 372 NMISSYKSYHGIPAQSKQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNS 431

Query: 360 SNGYLDED--CTPVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSC 533
           S     +D    P +YN  A+YL IEL++ACRDV  S ++  A    +++TWS +L +  
Sbjct: 432 SGNLSSDDSIMIPKRYNHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFS 491

Query: 534 KSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
            SL K F S  S+  ++    +DVYFGVKGL ILATFPE +  +SK ++
Sbjct: 492 SSLTKAFCS-ASICTSEDSHDADVYFGVKGLLILATFPEGYLLISKPVF 539


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Citrus sinensis]
          Length = 1151

 Score =  164 bits (414), Expect = 3e-38
 Identities = 96/234 (41%), Positives = 134/234 (57%), Gaps = 8/234 (3%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQ-SGDFISLILGDNDINVFM 179
           A Y S + TL+  SE L G+GF+++ ++ ++  LL  V +Q SG F+S I+GD DIN+  
Sbjct: 310 AVYSSHEPTLSFASESLDGVGFRENVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIF 369

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
            S++ YK   +I    KQ+LH VG +L   AK+SPA CN V  SFFP LM  LGLSV  S
Sbjct: 370 KSISSYKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHALGLSVGNS 429

Query: 360 SNGYLDEDCTP-------VKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTM 518
           +     +DC P        K N  A+YLCIEL+ ACR++  S +  K+V   + + W  +
Sbjct: 430 T-----QDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCL 484

Query: 519 LSNSCKSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           L +   SL K   S L  +  +    ++VYFGVKGL IL TF      +S SI+
Sbjct: 485 LQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISNSIF 538


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X1 [Citrus sinensis]
          Length = 1155

 Score =  164 bits (414), Expect = 3e-38
 Identities = 96/234 (41%), Positives = 134/234 (57%), Gaps = 8/234 (3%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQ-SGDFISLILGDNDINVFM 179
           A Y S + TL+  SE L G+GF+++ ++ ++  LL  V +Q SG F+S I+GD DIN+  
Sbjct: 310 AVYSSHEPTLSFASESLDGVGFRENVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIF 369

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
            S++ YK   +I    KQ+LH VG +L   AK+SPA CN V  SFFP LM  LGLSV  S
Sbjct: 370 KSISSYKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHALGLSVGNS 429

Query: 360 SNGYLDEDCTP-------VKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTM 518
           +     +DC P        K N  A+YLCIEL+ ACR++  S +  K+V   + + W  +
Sbjct: 430 T-----QDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCL 484

Query: 519 LSNSCKSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           L +   SL K   S L  +  +    ++VYFGVKGL IL TF      +S SI+
Sbjct: 485 LQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISNSIF 538


>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
           gi|557528866|gb|ESR40116.1| hypothetical protein
           CICLE_v10024743mg [Citrus clementina]
          Length = 1155

 Score =  162 bits (411), Expect = 7e-38
 Identities = 96/234 (41%), Positives = 134/234 (57%), Gaps = 8/234 (3%)
 Frame = +3

Query: 3   ATYISPQCTLTKESELLGGMGFQDSDVMMQAFILLQEVIQQ-SGDFISLILGDNDINVFM 179
           A Y S + TL+  SE L G+GF+D+ ++ ++  LL  V +Q SG F+S I+GD DIN+  
Sbjct: 310 AIYSSHEPTLSFASESLDGVGFRDNVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIF 369

Query: 180 NSLNQYKEMDQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKS 359
            S++ +K   +I    KQ+LH VG +L   AK+SPA CN V  SFFP LM  LGLSV  S
Sbjct: 370 KSISSFKTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHPLGLSVGNS 429

Query: 360 SNGYLDEDCTP-------VKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTM 518
           +     +DC P        K N  A+YLCIEL+ ACR++  S +  K+V   + + W  +
Sbjct: 430 T-----QDCFPNDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCL 484

Query: 519 LSNSCKSLVKGFFSLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           L +   SL K   S L  +  +    ++VYFGVKGL IL TF      +S SI+
Sbjct: 485 LQSYSASLAKALRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISNSIF 538


>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
           gi|550342418|gb|ERP63247.1| hypothetical protein
           POPTR_0003s04720g [Populus trichocarpa]
          Length = 913

 Score =  152 bits (385), Expect = 7e-35
 Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
 Frame = +3

Query: 45  ELLGGMGFQDSDVMMQAFILLQEVIQQSGD-FISLILGDNDINVFMNSLNQYKEMDQIPS 221
           E LGG+G Q++++  +A  LL++V+ Q+ D F S+I+GD +IN+ +NS+   +  ++IP 
Sbjct: 95  ESLGGLGCQENEIAAEALALLEKVVIQNNDLFSSMIVGDEEINMVLNSITGCQSYNEIPL 154

Query: 222 LEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGY-LDEDCTPVK 398
              Q+L+ VG +L+   K+S A C+++F  FF  LME +GL V   S     ++DC   K
Sbjct: 155 QSTQKLYSVGRILYVSVKASVASCSRIFQYFFSCLMESMGLPVVNGSGTCSFNDDCIISK 214

Query: 399 Y-NFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFSLLSLT 575
             N  ++YLC+EL+ ACRD+ +S     +    + +TW  +L     SL K F S L+ +
Sbjct: 215 RPNHGSLYLCVELLGACRDLVISSGDLASQCVSANETWCCLLQRFSTSLSKIFSSTLATS 274

Query: 576 VADQRPSSDVYFGVKGLQILATFPESFFPVSKS 674
                  +DVY GVKGLQILATFP  +  VSKS
Sbjct: 275 TDKPAHDADVYLGVKGLQILATFPGGYLLVSKS 307


>ref|XP_004302857.1| PREDICTED: uncharacterized protein LOC101304108 [Fragaria vesca
           subsp. vesca]
          Length = 1149

 Score =  151 bits (381), Expect = 2e-34
 Identities = 83/221 (37%), Positives = 129/221 (58%), Gaps = 8/221 (3%)
 Frame = +3

Query: 42  SELLGGMGFQDSDVMMQAFILLQEVIQQSGDFI-SLILGDNDINVFMNSLNQYKEMDQIP 218
           +E L G+GF++++++ +A ILLQ V  Q+   + SLI+ D DIN  +NS+  ++    IP
Sbjct: 326 AEPLVGLGFEENEIVTEALILLQNVTMQNDALLLSLIVRDEDINNVINSIASHESYTNIP 385

Query: 219 SLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGYLDEDCT--- 389
           S  +Q LH VG + F   K+S A CN+VF SFFP LM+ L +S+  SS     +DCT   
Sbjct: 386 SQGRQSLHAVGRIFFIITKTSMASCNRVFESFFPSLMKTLEISMGNSS-----KDCTLKE 440

Query: 390 ----PVKYNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFF 557
                 ++ F A+Y C+E IAACRD+ +  +        + +T   ML +S  +L+  F 
Sbjct: 441 NSFSSKRFKFGALYFCVEFIAACRDLIMRTNDHDEKFGTADETCCCMLQSSAPTLITAFC 500

Query: 558 SLLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
           + L+    +    +D+YF VKGLQ+LATFP  F  + K+++
Sbjct: 501 TTLAQISCNVADDADIYFKVKGLQMLATFPGYFLQIPKAMF 541


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
           communis] gi|223544868|gb|EEF46383.1| DNA
           repair/transcription protein met18/mms19, putative
           [Ricinus communis]
          Length = 1174

 Score =  148 bits (374), Expect = 1e-33
 Identities = 76/217 (35%), Positives = 132/217 (60%), Gaps = 3/217 (1%)
 Frame = +3

Query: 30  LTKESELLGGMGFQDSDVMMQAFILLQEVIQQSGDF-ISLILGDNDINVFMNSLNQYKEM 206
           L+ + E +   G + +++  +A +LL+ +I Q+ +F +S+I+ D ++ +  N++  YK  
Sbjct: 321 LSSDLESVDSPGSEKNEIATEALLLLENLIVQNNNFFLSMIISDEEVKMIFNTITSYKSY 380

Query: 207 DQIPSLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNG-YLDED 383
           ++I    KQ+LH+VG +L+ CAK S + CN++F S+FP LME LG+ V  +S   + +E+
Sbjct: 381 NEISLQSKQKLHMVGRILYVCAKVSVSSCNRIFESYFPRLMEALGILVENTSGACHSNEN 440

Query: 384 CTPVKY-NFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFS 560
           C   K  N+ + YL I+L+ ACRD++ S D+  +    + +T+  +L     SL + F +
Sbjct: 441 CVKAKQPNYGSFYLSIKLLGACRDLSTSSDNLASQCISTNETYCCLLQRFSTSLTETFSA 500

Query: 561 LLSLTVADQRPSSDVYFGVKGLQILATFPESFFPVSK 671
            L+ + +      D+Y GVKGLQILATFP  +  +SK
Sbjct: 501 ALATSTSGPAQDVDMYLGVKGLQILATFPGGYLFLSK 537


>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
          Length = 1210

 Score =  147 bits (371), Expect = 3e-33
 Identities = 78/214 (36%), Positives = 125/214 (58%), Gaps = 1/214 (0%)
 Frame = +3

Query: 42  SELLGGMGFQDSDVMMQAFILLQEVIQQSGDFI-SLILGDNDINVFMNSLNQYKEMDQIP 218
           SE + G+GFQ+++V+ +A +LL+ V+ Q+ + + S+I+ D DI+   N++  Y     IP
Sbjct: 366 SESIDGLGFQENEVVSEALVLLETVVMQNNNLLLSMIVDDEDISTVFNTMTSYGRYKDIP 425

Query: 219 SLEKQRLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGYLDEDCTPVK 398
              KQRLHVVG +L+   K+S A CN+V  +FF  L++ L LS+  SS  +         
Sbjct: 426 LQGKQRLHVVGRILYITTKTSIASCNRVLETFFRPLVDILQLSIRSSSRDWF-------- 477

Query: 399 YNFAAIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFSLLSLTV 578
            NF A+YLC+EL+AACRD+ +      +    + +T+  +L + C SL+    S+L  T 
Sbjct: 478 LNFGALYLCMELLAACRDLVIYSRELASNSIPAHETFCCILQSFCVSLIDALCSILETTA 537

Query: 579 ADQRPSSDVYFGVKGLQILATFPESFFPVSKSIY 680
            +     D+Y  V+ LQILATFPE    +S +++
Sbjct: 538 NEGADDVDIYLRVRSLQILATFPEDLLAISDNVF 571


>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X4 [Glycine max]
          Length = 1095

 Score =  140 bits (352), Expect = 5e-31
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
 Frame = +3

Query: 57  GMGFQDSDVMMQAFILLQEVIQQSGDF-ISLILGDNDINVFMNSLNQYKEMDQIPSLEKQ 233
           G+GF +++ +++A  LLQ++I Q+    +SLI+ D D+N   +++  Y+  D IP  EK+
Sbjct: 331 GIGFPENEFVIEALSLLQQLIAQNSSLLVSLIIDDEDVNTIFSTITSYETYDAIPVQEKK 390

Query: 234 RLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGYLDEDCTPV-KYNFA 410
           +LH +G +L+  +K++ + CN +F S F  +M+ LG SV +  NG    D +P  +  F 
Sbjct: 391 KLHAIGRILYITSKTTISSCNAMFESLFTRMMDNLGFSV-RFPNG----DISPSQRLKFG 445

Query: 411 AIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFSLLSLTVADQR 590
            +YLCIEL+A CR++ V  +       F  +T  TML +    L   F S+L+++ AD+ 
Sbjct: 446 FLYLCIELLAGCRELIVGSEEPALQYVFEHETCCTMLHSFSTPLFNAFGSVLAVS-ADRG 504

Query: 591 P-SSDVYFGVKGLQILATFPESFFPVSKSIY 680
           P   D Y GVKGLQILA F    FP+ KSI+
Sbjct: 505 PLDPDTYVGVKGLQILAMFHSDVFPIQKSIF 535


>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X3 [Glycine max]
          Length = 1102

 Score =  140 bits (352), Expect = 5e-31
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
 Frame = +3

Query: 57  GMGFQDSDVMMQAFILLQEVIQQSGDF-ISLILGDNDINVFMNSLNQYKEMDQIPSLEKQ 233
           G+GF +++ +++A  LLQ++I Q+    +SLI+ D D+N   +++  Y+  D IP  EK+
Sbjct: 331 GIGFPENEFVIEALSLLQQLIAQNSSLLVSLIIDDEDVNTIFSTITSYETYDAIPVQEKK 390

Query: 234 RLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGYLDEDCTPV-KYNFA 410
           +LH +G +L+  +K++ + CN +F S F  +M+ LG SV +  NG    D +P  +  F 
Sbjct: 391 KLHAIGRILYITSKTTISSCNAMFESLFTRMMDNLGFSV-RFPNG----DISPSQRLKFG 445

Query: 411 AIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFSLLSLTVADQR 590
            +YLCIEL+A CR++ V  +       F  +T  TML +    L   F S+L+++ AD+ 
Sbjct: 446 FLYLCIELLAGCRELIVGSEEPALQYVFEHETCCTMLHSFSTPLFNAFGSVLAVS-ADRG 504

Query: 591 P-SSDVYFGVKGLQILATFPESFFPVSKSIY 680
           P   D Y GVKGLQILA F    FP+ KSI+
Sbjct: 505 PLDPDTYVGVKGLQILAMFHSDVFPIQKSIF 535


>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
           X2 [Glycine max]
          Length = 1133

 Score =  140 bits (352), Expect = 5e-31
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
 Frame = +3

Query: 57  GMGFQDSDVMMQAFILLQEVIQQSGDF-ISLILGDNDINVFMNSLNQYKEMDQIPSLEKQ 233
           G+GF +++ +++A  LLQ++I Q+    +SLI+ D D+N   +++  Y+  D IP  EK+
Sbjct: 331 GIGFPENEFVIEALSLLQQLIAQNSSLLVSLIIDDEDVNTIFSTITSYETYDAIPVQEKK 390

Query: 234 RLHVVGHMLFTCAKSSPALCNKVFHSFFPLLMECLGLSVAKSSNGYLDEDCTPV-KYNFA 410
           +LH +G +L+  +K++ + CN +F S F  +M+ LG SV +  NG    D +P  +  F 
Sbjct: 391 KLHAIGRILYITSKTTISSCNAMFESLFTRMMDNLGFSV-RFPNG----DISPSQRLKFG 445

Query: 411 AIYLCIELIAACRDVAVSLDSSKAVLDFSQQTWSTMLSNSCKSLVKGFFSLLSLTVADQR 590
            +YLCIEL+A CR++ V  +       F  +T  TML +    L   F S+L+++ AD+ 
Sbjct: 446 FLYLCIELLAGCRELIVGSEEPALQYVFEHETCCTMLHSFSTPLFNAFGSVLAVS-ADRG 504

Query: 591 P-SSDVYFGVKGLQILATFPESFFPVSKSIY 680
           P   D Y GVKGLQILA F    FP+ KSI+
Sbjct: 505 PLDPDTYVGVKGLQILAMFHSDVFPIQKSIF 535