BLASTX nr result

ID: Mentha26_contig00046449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00046449
         (467 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20418.1| hypothetical protein MIMGU_mgv1a000468mg [Mimulus...    84   2e-14
ref|XP_004230113.1| PREDICTED: ribosome biogenesis protein BMS1 ...    62   8e-08

>gb|EYU20418.1| hypothetical protein MIMGU_mgv1a000468mg [Mimulus guttatus]
           gi|604300601|gb|EYU20419.1| hypothetical protein
           MIMGU_mgv1a000468mg [Mimulus guttatus]
           gi|604300602|gb|EYU20420.1| hypothetical protein
           MIMGU_mgv1a000468mg [Mimulus guttatus]
           gi|604300603|gb|EYU20421.1| hypothetical protein
           MIMGU_mgv1a000468mg [Mimulus guttatus]
          Length = 1130

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 56/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
 Frame = +1

Query: 1   SLDEKLEKSFISLFGKKPIVSSE-------PHEAVDQDVTTXXXXXXXXXXXXXXXXXXX 159
           S+DEKLEKSFI+LFGKKPI  SE        H+  D+++                     
Sbjct: 324 SVDEKLEKSFITLFGKKPISPSEVPIGSVDAHDVADKEIPLEPVEKYQSEIVDEDDESDE 383

Query: 160 XXXXXXXXSL-----DRKGVHNNQSPLRSTDDSSDDETFHSSEQHHATQNNLMEEIDLHG 324
                    L     ++K +    S  +S D+SS++ETF++SEQH   Q+N  E+ID+H 
Sbjct: 384 DSDTEGEDDLESSDGEKKTIKKPSS--KSIDESSEEETFYASEQHSPAQSNFKEQIDVHD 441

Query: 325 GRMRRKVVFDQKMXXXXXXXXXXXXXXXXXXXETGKGDEDML-SHSDS 465
           GR+RR+ VF+ +M                    T  GD++   SHSDS
Sbjct: 442 GRVRRRAVFENEMVTDDKDSGDEDDSDSSDDDNTENGDDEYASSHSDS 489


>ref|XP_004230113.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Solanum
           lycopersicum]
          Length = 1212

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/118 (35%), Positives = 53/118 (44%)
 Frame = +1

Query: 1   SLDEKLEKSFISLFGKKPIVSSEPHEAVDQDVTTXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           S+DEKLE SFISLFGKK   S   H   DQ                              
Sbjct: 398 SIDEKLENSFISLFGKKHNPSPSNHAKADQT-----NDLVPAERDQSGFEPNSDGSDEDN 452

Query: 181 XSLDRKGVHNNQSPLRSTDDSSDDETFHSSEQHHATQNNLMEEIDLHGGRMRRKVVFD 354
            + D K  H  +S   S+DDSS++E     E+H    ++  E +D H GRMRRK +FD
Sbjct: 453 DAEDLKRTHLKESN-DSSDDSSEEEDNIGPEKHPGLSSSFREHVDFHDGRMRRKAIFD 509


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