BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00045608
         (685 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   291   2e-76
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   288   1e-75
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   284   2e-74
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   283   4e-74
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     280   4e-73
gb|ABW74566.1| integrase [Boechera divaricarpa]                       276   3e-72
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   275   1e-71
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   273   4e-71
gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]    272   9e-71
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]       266   4e-69
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   265   8e-69
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   264   2e-68
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   264   2e-68
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      263   3e-68
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   262   7e-68
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   262   9e-68
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c...   261   1e-67
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   261   2e-67
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   261   2e-67
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   261   2e-67

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  291 bits (744), Expect = 2e-76
 Identities = 141/230 (61%), Positives = 181/230 (78%), Gaps = 2/230 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            YSQQ G+DF+ETF+PVAR ET+R  LA+A Q  L V+Q DVKSAFLNG+LEEE+YV QPQ
Sbjct: 888  YSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQ 947

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRD-F 332
            GF++ G E++VY+LRKALYGLKQ PRAW  KID +F+ SGF RS NEP+LY+KK G D F
Sbjct: 948  GFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEF 1007

Query: 331  LVICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEK 152
            L++CLYVDD+IY G++ S V DFK  MM  FEM+DLG+++YFLG++V Q    IF+SQ+K
Sbjct: 1008 LLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKK 1067

Query: 151  YIENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            Y E+LL++F M  C+  +TP+  NEKLQ  DG+E+A+  +FRSLVG L Y
Sbjct: 1068 YAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNY 1117


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  288 bits (737), Expect = 1e-75
 Identities = 136/229 (59%), Positives = 183/229 (79%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            + Q+PGID+ ET+APVAR+ETIR  +A+A Q + K++QLDVKSAFLNG L+EEIYVEQP+
Sbjct: 915  FKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 974

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
            GF V+G E++V+RL+KALYGLKQ PRAW  +ID+YF Q GF +S +EP+LYV K G D L
Sbjct: 975  GFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDIL 1034

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            ++ LYVDDLIY G ++  + DFKK MM  +EM+DLG++ YFLGM+V Q    IF+SQ KY
Sbjct: 1035 IVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKY 1094

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             EN+L++F M  CK V+TP++ NEK + +DG+++AD +I+RSLVGSL+Y
Sbjct: 1095 AENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLY 1143


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  284 bits (727), Expect = 2e-74
 Identities = 134/229 (58%), Positives = 181/229 (79%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            + Q+PGID+ ET+APVAR+ETIR  +A+A Q + K++QLDVKSAFLNG L+EEIYVEQP+
Sbjct: 705  FKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 764

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
            GF V+G E++V+RL+KALYGLKQ PR W  +ID+YF Q GF +S +EP+LYV K G D L
Sbjct: 765  GFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDIL 824

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            ++ LYVDDLIY G ++  + DFKK MM  +EM+DLG++ YFLGM+V Q    IF+SQ KY
Sbjct: 825  IVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQSDEGIFISQRKY 884

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             EN+L++F M  CK V+TP++ NEK + +DG+++ D +I+RSLVGSL+Y
Sbjct: 885  AENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLY 933


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  283 bits (724), Expect = 4e-74
 Identities = 134/229 (58%), Positives = 182/229 (79%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            + Q+PGID+ ET+APVAR+ETIR  +A+A Q + K++QLDVKSAFLNG L+EEIYVEQP+
Sbjct: 778  FKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 837

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
            GF V+G E++V+RL+KALYGLKQ PRAW  +ID+YF Q GF +S +EP+LYV K G D L
Sbjct: 838  GFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDIL 897

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            ++ LYVDDLIY G ++  + DFKK MM  +EM+DLG++ YFLGM+V Q    IF+SQ KY
Sbjct: 898  IVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKY 957

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             +N+L++F M  CK V+TP++ NEK + + G+++AD +I+RSLVGSL+Y
Sbjct: 958  AKNILKKFKMDNCKSVTTPLLPNEKQKARYGADKADPTIYRSLVGSLLY 1006


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  280 bits (715), Expect = 4e-73
 Identities = 134/229 (58%), Positives = 180/229 (78%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            + Q+PGID+ ET+A VAR+ETI   +A+A Q + K++QLDVKSAFLNG L+EEIYVEQP+
Sbjct: 699  FKQKPGIDYYETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPE 758

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
             F V+G E++V+RL+KALYGLKQ PRAW  +ID+YF Q GF +S +EP LYVKK G D L
Sbjct: 759  RFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPILYVKKTGTDIL 818

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            ++ LYVDDLIY G ++  + DFKK MM  +EM+DLG++ YFLGM+V Q    IF+SQ KY
Sbjct: 819  IVSLYVDDLIYTGNSEKLMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKY 878

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             EN+L++F M  CK V+TP++ NEK + +DG+++AD +I+RSLVGSL+Y
Sbjct: 879  AENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLY 927


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  276 bits (707), Expect = 3e-72
 Identities = 135/230 (58%), Positives = 177/230 (76%), Gaps = 2/230 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIAQHK-LKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            Y+Q+ G+D+ +TF+PVAR +T+R  LA+  +    ++Q DVKSAFLNGEL EE+YV+QP+
Sbjct: 719  YAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPE 778

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGR-DF 332
            GF+V+G+E  VYRL KALYGLKQ PRAW  KID YF ++GFERS +EP+LY+KK G  D 
Sbjct: 779  GFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDI 838

Query: 331  LVICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEK 152
            LV+CLYVDD+IY G++ S V +FK  MM KFEMTDLG++ +FLG++V+Q    +F+SQ K
Sbjct: 839  LVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVSQHK 898

Query: 151  YIENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            Y  +LL+RF MA C  V TP+  NEKL   DG+E+ADA+ FRSLVG LIY
Sbjct: 899  YACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIY 948


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  275 bits (702), Expect = 1e-71
 Identities = 132/230 (57%), Positives = 178/230 (77%), Gaps = 2/230 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIAQHK-LKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            Y+QQ G+D+++TF+PVAR ET+R  LA+A H    V+Q DVKSAFLNGEL EE+Y  QP+
Sbjct: 988  YAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPE 1047

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGR-DF 332
            GF+V  KE+ VYRL+ ALYGLKQ PRAW  KID YF ++GFE+S +EP+LY+K+ G+ D 
Sbjct: 1048 GFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDL 1107

Query: 331  LVICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEK 152
            L+ICLYVDD+IY G++ S + +FK  M  KFEM+DLG++ +FLG++V+Q    +F+SQ K
Sbjct: 1108 LIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRK 1167

Query: 151  YIENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            Y  +LL++F+M  CK V+ P+  NEKLQ +DG+E+ADA  FRSLVG LIY
Sbjct: 1168 YAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIY 1217


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  273 bits (698), Expect = 4e-71
 Identities = 130/230 (56%), Positives = 181/230 (78%), Gaps = 2/230 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIAQHK-LKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            YSQQPG DF+ETFAPVAR++TIR  +A+A  K   ++QLD+KSAFLNG+LE EIYVEQPQ
Sbjct: 978  YSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQPQ 1037

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVK-KNGRDF 332
            GFVV G+E++VY+L+KALYGLKQ PRAW  +ID YF ++GF RS +EP+LYVK K+    
Sbjct: 1038 GFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQI 1097

Query: 331  LVICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEK 152
            L++ LYVDDLI+ G ++  V  F+ +MM K+EM+D+G++ YFLG++V Q    +F+ Q++
Sbjct: 1098 LIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQEEDGVFICQKR 1157

Query: 151  YIENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            Y+E++L++F MA C  VSTP++ NEKL+ +DG +  D + FRSLVG+L+Y
Sbjct: 1158 YVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKMVDETHFRSLVGNLLY 1207


>gb|EXB44219.1| ABC transporter C family member 9 [Morus notabilis]
          Length = 2077

 Score =  272 bits (695), Expect = 9e-71
 Identities = 136/229 (59%), Positives = 178/229 (77%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALA-IAQHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            YSQQ G+DF++TFAPVAR +TIR  +A +AQ   K+FQLDVKSAFLNG L+EEI+VEQP 
Sbjct: 996  YSQQFGVDFSDTFAPVARHDTIRLLIALVAQKGWKIFQLDVKSAFLNGYLKEEIFVEQPP 1055

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
             F+ KG ED+VY+L+KALYGLKQ PRAW  +ID++  Q GF+RSP+E +LYV++ G D L
Sbjct: 1056 CFLKKGNEDKVYQLKKALYGLKQAPRAWYSRIDDHLLQLGFKRSPSEATLYVQQAGDDLL 1115

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            +I LYVDDL+  G+N + V  FKK+M + FEMTDLG M YFLGM++ Q    IF+SQEKY
Sbjct: 1116 IISLYVDDLLITGSNITLVQKFKKEMQNVFEMTDLGEMSYFLGMKILQTEQGIFISQEKY 1175

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             +++L++F M  CK VSTP+  NEKL  +DGS++ DA I+RSL+G L+Y
Sbjct: 1176 AKDVLKKFGMENCKDVSTPLGLNEKLSKEDGSDKIDAGIYRSLIGCLLY 1224


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score =  266 bits (681), Expect = 4e-69
 Identities = 124/229 (54%), Positives = 173/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
           YSQ  GID++E FAPVAR+ET+R  +++A Q++ ++ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 68  YSQSAGIDYDEVFAPVARLETVRLIISLAAQNRWRIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G++VKGKED+V RL+KALYGLKQ PRAWN +ID+YF++  F + P E +LY+K    + L
Sbjct: 128 GYIVKGKEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKSFIKCPYEHALYIKTQNNNIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLYVDDLI+ G+N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF+SQE Y
Sbjct: 188 IACLYVDDLIFTGSNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PV TP+    KL   D  E  D ++F+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVCTPMECGAKLSKHDEGESVDPTLFKSLVGSLRY 296


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  265 bits (678), Expect = 8e-69
 Identities = 129/230 (56%), Positives = 175/230 (76%), Gaps = 2/230 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIAQHK-LKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            Y+QQ G+D+++TF+PVAR ET+R  LA+A H     +Q DVKSAFLNGEL EE+YV Q +
Sbjct: 817  YAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXE 876

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGR-DF 332
            GF+V  KE+ VYRL+KALYGLKQ PRAW  KID YF ++GFERS +EP+LY+K+ G+ D 
Sbjct: 877  GFIVPXKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDL 936

Query: 331  LVICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEK 152
            L+ICLYVDD+IY G++ S + +FK  M  KFEM++LG++ +FL ++V+Q    +F+SQ K
Sbjct: 937  LIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSBLGLLHFFLXLEVKQVEDGVFVSQRK 996

Query: 151  YIENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            Y  +LL++F+M  CK V+T +  NEKLQ +DG+E+ADA  F SLV  LIY
Sbjct: 997  YXVDLLKKFNMLNCKVVATXMNSNEKLQAEDGTERADARRFXSLVRGLIY 1046


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  264 bits (675), Expect = 2e-68
 Identities = 125/229 (54%), Positives = 173/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            YSQ+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 875  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 934

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
            G++VKG+ED+V RL+KALYGLKQ PRAWN +ID+YF++  F + P E +LY+K    D L
Sbjct: 935  GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDIL 994

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 995  IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1054

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             + +L++F M +  PV TP+    KL  K+  E  D + F+SLVGSL Y
Sbjct: 1055 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRY 1103


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  264 bits (674), Expect = 2e-68
 Identities = 124/229 (54%), Positives = 174/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
           YSQ+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G++VKG+ED+V RL+KALYGLKQ PRAWN +ID+YF++  F + P E +LY+K    D L
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q   +IF++QE Y
Sbjct: 188 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PV+TP+    KL   +  E  D + F+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRY 296


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  263 bits (673), Expect = 3e-68
 Identities = 123/229 (53%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIAQHKL-KVFQLDVKSAFLNGELEEEIYVEQPQ 509
           YSQ+ GID++E FAPVAR+ET+R  +++A  K  ++ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G++VKG+ED+V RL+KALYGLKQ PRAWN +ID+YF + GF + P E +LY+K    D L
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHALYIKTQNNDIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLYVDDLI+ G N     DFKK+M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 188 IACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PV TP+    KL  ++  E  D ++F+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSLVGSLRY 296


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  262 bits (670), Expect = 7e-68
 Identities = 124/229 (54%), Positives = 173/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
           YSQ+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G++VKG+ED+V RL+KALYGLKQ PRAWN +ID+YF++  F + P E +LY+K    D L
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 188 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PV+TP+    KL   +  E  D + F+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRY 296


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  262 bits (669), Expect = 9e-68
 Identities = 124/229 (54%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            Y Q+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 907  YIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 966

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
            G++VKG+ED+V RL+KALYGLKQ PRAWN +ID+YF++  F + P E +LY+K    D L
Sbjct: 967  GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDIL 1026

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 1027 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             + +L++F M +  PV TP+    KL  K+  E  D + F+SLVGSL Y
Sbjct: 1087 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRY 1135


>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  261 bits (668), Expect = 1e-67
 Identities = 122/229 (53%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
           YSQ+ GID++E FAPVAR+ET+R  +++A Q+  K+ Q+DVKSAFLNGEL+EE+Y+EQPQ
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFLNGELDEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G+VVKG+ED+V RLRKALYGLKQ PRAW+ +ID+YF++  F + P E +LY+K    D L
Sbjct: 128 GYVVKGEEDKVLRLRKALYGLKQAPRAWSTRIDKYFKEKNFIKCPYEHALYIKTQNNDIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLY+DDLI+   N +   DFK++M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 188 IACLYIDDLIFTNNNPNMFEDFKQEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PVSTP+    KL   +  E  D ++F+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVSTPMECGSKLSKHEEGESIDPTLFKSLVGSLRY 296


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  261 bits (667), Expect = 2e-67
 Identities = 124/229 (54%), Positives = 173/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
           YSQ+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 68  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G++VKG+ED+V RL+KALYGLKQ PRAWN +I++YF++  F + P E +LY+K    D L
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFIKCPYEHALYIKIQKDDIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF+SQE Y
Sbjct: 188 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PV+TP+    KL   +  E  D + F+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRY 296


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  261 bits (667), Expect = 2e-67
 Identities = 124/229 (54%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685 YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
           Y Q+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 68  YCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 127

Query: 508 GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
           G++VKG+ED+V RL+KALYGLKQ PRAWN +ID+YF++  F + P E +LY+K    D L
Sbjct: 128 GYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDIL 187

Query: 328 VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
           + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 188 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 247

Query: 148 IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
            + +L++F M +  PV+TP+    KL   +  E  D  IF+SLVGSL Y
Sbjct: 248 AKEVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPIIFKSLVGSLRY 296


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  261 bits (667), Expect = 2e-67
 Identities = 124/229 (54%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
 Frame = -1

Query: 685  YSQQPGIDFNETFAPVARIETIRAALAIA-QHKLKVFQLDVKSAFLNGELEEEIYVEQPQ 509
            YSQ+ GID++E FAPVAR+ET+R  +++A Q+K K+ Q+DVKSAFLNG+LEEE+Y+EQPQ
Sbjct: 907  YSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 966

Query: 508  GFVVKGKEDQVYRLRKALYGLKQTPRAWNKKIDEYFRQSGFERSPNEPSLYVKKNGRDFL 329
            G++VKG+ED+V RL+K LYGLKQ PRAWN +ID+YF++  F + P E +LY+K    D L
Sbjct: 967  GYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDIL 1026

Query: 328  VICLYVDDLIYFGTNDSQVYDFKKQMMSKFEMTDLGMMRYFLGMQVRQGGGKIFLSQEKY 149
            + CLYVDDLI+ G N S   +FKK+M  +FEMTD+G+M Y+LG++V+Q    IF++QE Y
Sbjct: 1027 IACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086

Query: 148  IENLLERFHMAECKPVSTPIMFNEKLQLKDGSEQADASIFRSLVGSLIY 2
             + +L++F M +  PV TP+    KL  K+  E  D + F+SLVGSL Y
Sbjct: 1087 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRY 1135