BLASTX nr result
ID: Mentha26_contig00045331
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00045331
(504 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 182 3e-44
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 182 4e-44
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 181 7e-44
emb|CAN82795.1| hypothetical protein VITISV_013492 [Vitis vinifera] 179 4e-43
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 176 3e-42
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 174 1e-41
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera] 173 3e-41
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 173 3e-41
gb|AAB82754.1| retrofit [Oryza longistaminata] 172 3e-41
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 171 7e-41
emb|CAN67728.1| hypothetical protein VITISV_032763 [Vitis vinifera] 171 1e-40
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In... 169 3e-40
gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subc... 169 3e-40
emb|CAN70357.1| hypothetical protein VITISV_013713 [Vitis vinifera] 169 3e-40
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 169 3e-40
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 169 4e-40
emb|CAN62538.1| hypothetical protein VITISV_031159 [Vitis vinifera] 169 4e-40
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 169 5e-40
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera] 169 5e-40
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 169 5e-40
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 182 bits (463), Expect = 3e-44
Identities = 87/168 (51%), Positives = 116/168 (69%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY +TFSPVVK TIR++ S+A ++ WC++QLD+ NAFL+G+
Sbjct: 797 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGV 856
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP G+EDS+ P YVCKL+K+LYGLKQAPRAWY L K LY +GF+ +D S
Sbjct: 857 LEEEVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTS 916
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF T ++AV ++ LQ+EF LK LG+
Sbjct: 917 LFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGD 964
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 182 bits (462), Expect = 4e-44
Identities = 88/168 (52%), Positives = 114/168 (67%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY +TFSPVVK TIR+V S+A +R WC++QLD+ NAFL+G
Sbjct: 997 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGF 1056
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP G+ED ++P YVCKL+K+LYGLKQAPRAWY L K LY LGF+ D S
Sbjct: 1057 LEEEVYMKQPPGYEDESFPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTS 1116
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF T ++AV ++ L++EF LK LG+
Sbjct: 1117 LFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGD 1164
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 181 bits (460), Expect = 7e-44
Identities = 87/168 (51%), Positives = 115/168 (68%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY +TFSPVVK TIR++ S+A +R WC++QLD+ NAFL+G+
Sbjct: 981 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQLDVQNAFLHGV 1040
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP G+E+ + PDYVCKL+K+LYGLKQAPRAWY L L+ LGFK +D S
Sbjct: 1041 LEEEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTS 1100
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF + K+AV ++ LQ+EF LK LG+
Sbjct: 1101 LFFYNKGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGD 1148
>emb|CAN82795.1| hypothetical protein VITISV_013492 [Vitis vinifera]
Length = 624
Score = 179 bits (454), Expect = 4e-43
Identities = 86/167 (51%), Positives = 115/167 (68%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
+K KARLVA+GF Q AG D+NETFSP+VK TTIR+V ++A +R W ++QLDIN+AFLNGI
Sbjct: 265 EKYKARLVAKGFHQQAGFDFNETFSPIVKPTTIRIVLTIALSRGWSVRQLDINDAFLNGI 324
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
L++ ++M+QP GF D +P YVC+L K+LYGLKQAPRAW++ L K+L GF +D
Sbjct: 325 LQEEVFMSQPQGFVDEKHPKYVCRLHKALYGLKQAPRAWFERLHKALLQFGFVSSKADQY 384
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLG 501
LFF+ +ST TG + D V +I +L +F LK LG
Sbjct: 385 LFFRITSTHTTYILVFVDDILITGSNADVVTTLIKLLDVKFSLKDLG 431
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 176 bits (446), Expect = 3e-42
Identities = 86/168 (51%), Positives = 113/168 (67%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY +TFSPVVK TIR++ S+A +R W ++QLD+ NAFL+GI
Sbjct: 806 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGI 865
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP G+ED +PDYVCKL+K+LYGLKQAPRAWY L + L LGF+ +D S
Sbjct: 866 LEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTS 925
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF +DAV ++ LQ++F LK LG+
Sbjct: 926 LFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGD 973
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 174 bits (440), Expect = 1e-41
Identities = 86/168 (51%), Positives = 115/168 (68%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+LKARLVA+GF+Q GIDY++TFSPVVK +TIRLV SLA ++ W ++QLD+ NAFL+GI
Sbjct: 983 DRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGI 1042
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP GF D+T+P+Y C L+KSLYGLKQ PRAWY L + L SLGF +D S
Sbjct: 1043 LEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVS 1102
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LF + + TG A+ V++ L+ +F +K LG+
Sbjct: 1103 LFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGD 1150
>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
Length = 1354
Score = 173 bits (438), Expect = 3e-41
Identities = 87/166 (52%), Positives = 107/166 (64%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF Q G+DY+ETFSPVVK TT+RLV S+A + W ++QLD+NNAFL G
Sbjct: 904 DRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSIAVSNGWSLRQLDVNNAFLQGR 963
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
L +N++MAQP GF DS +P YVCKL K++YGLKQAPRAWY L++ L + GFK SD S
Sbjct: 964 LSENVFMAQPPGFVDSDHPSYVCKLHKAIYGLKQAPRAWYHELRQFLLTSGFKNSHSDTS 1023
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHL 498
LF SS TG V + L Q F LK L
Sbjct: 1024 LFVLRSSNHVVYLLVYVDDIILTGSSDTLVSQFVDYLAQXFSLKDL 1069
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 173 bits (438), Expect = 3e-41
Identities = 88/168 (52%), Positives = 112/168 (66%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
+K KARLVA+GF Q+AG D+NETFSPVVK TTIR+V ++A W ++QLD+NNAFLNG
Sbjct: 941 NKYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIVLTIALNLQWKVRQLDVNNAFLNGD 1000
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
L ++I+M QP GF D P+YVCKL KSLYGLKQAPRAW++ L ++L LGF SD S
Sbjct: 1001 LHEDIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAPRAWFEKLHQALGILGFSSTKSDQS 1060
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LF + T TG++ V VI+ L +F LK LG+
Sbjct: 1061 LFINITPTHSTYILVYVDDILITGNNDQFVQHVITQLNNQFALKDLGD 1108
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 172 bits (437), Expect = 3e-41
Identities = 85/168 (50%), Positives = 109/168 (64%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY +TFSPVVK TIR++ S+A +R W ++QLD+ NAFL+G
Sbjct: 995 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGF 1054
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP GFE S+ PDYVCKL+K+LYGLKQAPRAWY L K L LGF+ +D S
Sbjct: 1055 LEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTS 1114
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF + A ++ L +EF LK LG+
Sbjct: 1115 LFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGD 1162
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 171 bits (434), Expect = 7e-41
Identities = 84/166 (50%), Positives = 110/166 (66%)
Frame = +1
Query: 4 KLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGIL 183
K KARLVA+GF Q AG D+ ETFSPVVK +T+R+VF++A +RNW I+QLD+NNAFLNG L
Sbjct: 996 KYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDL 1055
Query: 184 EDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFSL 363
++ ++M QP GF D P+ VC+L K+LYGLKQAPRAW++ L ++L S GF SD SL
Sbjct: 1056 QEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSL 1115
Query: 364 FFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLG 501
F + + G D A+ +I+ L EF LK LG
Sbjct: 1116 FLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLG 1161
>emb|CAN67728.1| hypothetical protein VITISV_032763 [Vitis vinifera]
Length = 1009
Score = 171 bits (432), Expect = 1e-40
Identities = 87/168 (51%), Positives = 107/168 (63%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
DK KARLVA+GF+Q AG+D++ TFSPVVK +TIR++F+L NW IQQ+DIN AFLNGI
Sbjct: 673 DKFKARLVAKGFQQHAGVDFSNTFSPVVKVSTIRIIFTLVVAYNWDIQQIDINYAFLNGI 732
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
L N+YM QP GF ST+P +VCKL KSLYGLKQ PRAW+ L+ +L S GF+ D S
Sbjct: 733 LHKNVYMCQPVGFGSSTHPTHVCKLIKSLYGLKQTPRAWFVQLRNALVSWGFQPSIYDNS 792
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LF + TGD + VI L F LK LG+
Sbjct: 793 LFHSRKNGHLVLVLVYVDDILITGDSSTLIHSVIQALTSRFALKTLGS 840
>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
gi|289065044|ref|YP_003433855.1| hypothetical protein
OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100220|gb|AAZ99382.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
protein [Oryza sativa Indica Group]
gi|353685219|gb|AER12982.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685288|gb|AER13050.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277649|gb|AEZ03755.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277659|gb|AEZ03764.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540457|dbj|BAN67511.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540460|dbj|BAN67513.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 490
Score = 169 bits (429), Expect = 3e-40
Identities = 84/167 (50%), Positives = 110/167 (65%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY ETFSPVVK TIRL+ SLA + W ++QLD+ NAFL+G+
Sbjct: 43 DRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGV 102
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+++YM QP G+ED + DYVCKL+K+LYGLKQAPRAW+ L L +LGF+ +D S
Sbjct: 103 LEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADAS 162
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLG 501
LFF T + A ++ L++EF LK LG
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLG 209
>gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 308
Score = 169 bits (429), Expect = 3e-40
Identities = 84/167 (50%), Positives = 110/167 (65%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY ETFSPVVK TIRL+ SLA + W ++QLD+ NAFL+G+
Sbjct: 43 DRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGV 102
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+++YM QP G+ED + DYVCKL+K+LYGLKQAPRAW+ L L +LGF+ +D S
Sbjct: 103 LEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADAS 162
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLG 501
LFF T + A ++ L++EF LK LG
Sbjct: 163 LFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLG 209
>emb|CAN70357.1| hypothetical protein VITISV_013713 [Vitis vinifera]
Length = 1568
Score = 169 bits (429), Expect = 3e-40
Identities = 86/169 (50%), Positives = 113/169 (66%), Gaps = 1/169 (0%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
++ KARLVARGF Q GIDY ETF+PV K TIR++ SLA +NWC+QQLDI NAFLNG
Sbjct: 1115 ERFKARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQNWCLQQLDIKNAFLNGD 1174
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM P GFE S + VCKL+KSLYGLKQ+PRAW+D K++ LG+K+ +D +
Sbjct: 1175 LEEEVYMEIPPGFEGSMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQTDHT 1234
Query: 361 LFFKASSTG-XXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LF K S G +G+D + + + L +EF++K LGN
Sbjct: 1235 LFVKKSHAGKMXILIVYVDDIILSGNDMEELQNLKKYLSEEFEVKDLGN 1283
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 169 bits (429), Expect = 3e-40
Identities = 83/164 (50%), Positives = 108/164 (65%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
DK KARLVA+GF Q G+DY ETFSPV+K+TTIRLV +A ++W I+QLD+NNAFL G
Sbjct: 1023 DKYKARLVAKGFNQQYGVDYAETFSPVIKSTTIRLVLDVAVKKDWEIKQLDVNNAFLQGT 1082
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
L + +YMAQP GF D P +VC+L K++YGLKQAPRAWY LK+ L+++GF SD S
Sbjct: 1083 LTEEVYMAQPPGFIDKDRPTHVCRLRKAIYGLKQAPRAWYMELKQHLFNIGFVNSLSDAS 1142
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLK 492
LF T TG DK ++ V++ L + F +K
Sbjct: 1143 LFIYCHGTTFVYVLVYVDDIIVTGSDKSSIDAVLTSLAERFSIK 1186
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 169 bits (428), Expect = 4e-40
Identities = 84/168 (50%), Positives = 111/168 (66%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+G++Q GIDY++TFSPVVK TIR++ S+A +R W + QLD+ NAFL+G+
Sbjct: 863 DRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGV 922
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP G+EDST +YVCKL+K+LYGLKQAPRAWY L L SLGF+ +D S
Sbjct: 923 LEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTS 982
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF + A ++S L +EF LK LG+
Sbjct: 983 LFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGD 1030
>emb|CAN62538.1| hypothetical protein VITISV_031159 [Vitis vinifera]
Length = 1481
Score = 169 bits (428), Expect = 4e-40
Identities = 84/169 (49%), Positives = 113/169 (66%), Gaps = 1/169 (0%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
++ KARLVARGF Q GIDY ETF+PV K TIR++ SLA ++WC+QQLDI NAFLNG
Sbjct: 1028 ERFKARLVARGFTQXYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGD 1087
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM P GFE+S + VCKL+KSLYGLKQ+PRAW+D K++ LG+K+ +D +
Sbjct: 1088 LEEEVYMEIPPGFEESMAKNQVCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHT 1147
Query: 361 LFFKASSTG-XXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LF K S G +G+D + + + L +EF++K LGN
Sbjct: 1148 LFVKKSHAGKMAILIVYVDDIILSGNDMEELQNLKKYLSEEFEVKDLGN 1196
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 169 bits (427), Expect = 5e-40
Identities = 84/167 (50%), Positives = 107/167 (64%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GF+Q GIDY +TFSPVVK TIR++ SLA ++ W ++QLD+ NAFL+G
Sbjct: 725 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGY 784
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP GFED T P +VCKL+K+LYGLKQAPRAW+ L K L LGFK +D S
Sbjct: 785 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTS 844
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLG 501
LFF + A ++ L+ EF LK LG
Sbjct: 845 LFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLG 891
>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
Length = 1044
Score = 169 bits (427), Expect = 5e-40
Identities = 82/168 (48%), Positives = 110/168 (65%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
DK KARLVA+G+ Q G+DYNETFSPVVK TIR + S+A W ++Q+D+NNAFL+G
Sbjct: 580 DKFKARLVAKGYNQQPGVDYNETFSPVVKPATIRTMLSIAIMNGWPLKQMDVNNAFLHGN 639
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
L + +YM QP GF+D + PDYVC+L K++YGLKQ PRAWY LK +L +LGF+ +D S
Sbjct: 640 LTETVYMMQPPGFKDLSRPDYVCRLRKAIYGLKQGPRAWYSALKTALLALGFQNSKADSS 699
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LF + TG+DK V V++ L +F LK +G+
Sbjct: 700 LFVYHHDSIVCYFLVYVDDLVITGNDKKFVAHVVTKLGDQFSLKDMGS 747
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 169 bits (427), Expect = 5e-40
Identities = 83/168 (49%), Positives = 107/168 (63%)
Frame = +1
Query: 1 DKLKARLVARGFEQLAGIDYNETFSPVVKTTTIRLVFSLAATRNWCIQQLDINNAFLNGI 180
D+ KARLVA+GFEQ GIDY +TFSPVVK TIR + S+A +R W ++QLD+ NAFL+G
Sbjct: 875 DRYKARLVAKGFEQRYGIDYEDTFSPVVKAATIRTILSVAVSRGWSLRQLDVQNAFLHGY 934
Query: 181 LEDNIYMAQPFGFEDSTYPDYVCKLEKSLYGLKQAPRAWYDTLKKSLYSLGFKRCTSDFS 360
LE+ +YM QP G+ED P+Y+CKL+K+LYGLKQAPRAWY L L LGF+ +D S
Sbjct: 935 LEEEVYMRQPPGYEDRNKPNYICKLDKALYGLKQAPRAWYSRLSMKLCDLGFQPSKADTS 994
Query: 361 LFFKASSTGXXXXXXXXXXXXXTGDDKDAVMGVISMLQQEFKLKHLGN 504
LFF +DA ++ L+QEF LK G+
Sbjct: 995 LFFYNKGNIVIFVLIYVDDIIVASSTEDATNALLRDLKQEFALKDFGD 1042