BLASTX nr result

ID: Mentha26_contig00044954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00044954
         (368 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45893.1| hypothetical protein MIMGU_mgv1a016267mg [Mimulus...    57   3e-06
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote...    57   3e-06
ref|XP_007215150.1| hypothetical protein PRUPE_ppa013348mg [Prun...    57   3e-06
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...    57   3e-06
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri...    57   3e-06
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...    57   3e-06

>gb|EYU45893.1| hypothetical protein MIMGU_mgv1a016267mg [Mimulus guttatus]
          Length = 128

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 30/47 (63%)
 Frame = +1

Query: 226 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAV 366
           MSWAGPEDVYLSTSLASY                 ILRSFDQFANAV
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47


>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 30/47 (63%)
 Frame = +1

Query: 226 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAV 366
           MSWAGPEDVYLSTSLASY                 ILRSFDQFANAV
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAV 47


>ref|XP_007215150.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
           gi|462411300|gb|EMJ16349.1| hypothetical protein
           PRUPE_ppa013348mg [Prunus persica]
          Length = 128

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 30/47 (63%)
 Frame = +1

Query: 226 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAV 366
           MSWAGPEDVYLSTSLASY                 ILRSFDQFANAV
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 30/47 (63%)
 Frame = +1

Query: 226 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAV 366
           MSWAGPED+YLSTSLASY                 ILRSFDQFANAV
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAV 47


>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|222841552|gb|EEE79099.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 30/47 (63%)
 Frame = +1

Query: 226 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAV 366
           MSWAGPED+YLSTSLASY                 ILRSFDQFANAV
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAV 47


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 30/47 (63%)
 Frame = +1

Query: 226 MSWAGPEDVYLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAV 366
           MSWAGPED+YLSTSLASY                 ILRSFDQFANAV
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAV 47


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