BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00043987
         (1073 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus...   488   e-135
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   409   e-112
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   384   e-104
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   337   4e-90
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   337   4e-90
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   330   5e-88
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   330   5e-88
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   315   2e-83
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   308   2e-81
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   299   1e-78
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   298   3e-78
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              286   1e-74
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   285   2e-74
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   285   2e-74
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   285   2e-74
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   282   2e-73
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   278   2e-72
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   278   2e-72
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   278   3e-72
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   278   3e-72

>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
          Length = 1379

 Score =  488 bits (1255), Expect = e-135
 Identities = 238/359 (66%), Positives = 289/359 (80%), Gaps = 2/359 (0%)
 Frame = -1

Query: 1073 ITSEVCSEAD--SQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKV 900
            ITS +CSEAD  +Q+DSIICIS +L E+ +   D+DILRDMV+P +LQTV+KGF EFKKV
Sbjct: 964  ITSRLCSEADICNQSDSIICISVSLIETFREFSDLDILRDMVMPVILQTVIKGFREFKKV 1023

Query: 899  DILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDV 720
            DILWK+   + KF +   G+ +LRVVMS+YCE TKFWS L DKCLPIRNIIDW++SHPD 
Sbjct: 1024 DILWKDDPKHPKFSRSPPGKPFLRVVMSEYCERTKFWSILKDKCLPIRNIIDWKQSHPDD 1083

Query: 719  LLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQ 540
            +LD  EA G+D AWQ FV SLH+AIS TGK ILPEHL++TANCLSATGEF+PLN +GLA 
Sbjct: 1084 ILDISEAYGVDAAWQCFVTSLHSAISGTGKPILPEHLILTANCLSATGEFVPLNAKGLAL 1143

Query: 539  QRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILY 360
            QRKE N++SPF+Q C +NPSDCF+KAAK  Q+DGLQGSLEALAWGQTP IGTGC F+I+Y
Sbjct: 1144 QRKEANVHSPFNQGCLSNPSDCFLKAAKMGQMDGLQGSLEALAWGQTPPIGTGCRFDIVY 1203

Query: 359  KGKGHEPAGRADVYTLLSTHLKSAKVGAEVKQVCRKSIASYHLDSKGQNNLLRDMLSRCF 180
             GKGH PA  ADVY+LLSTH + AK  A  KQV   SI+SYH ++KG   LLR M+S+ F
Sbjct: 1204 NGKGHIPAKNADVYSLLSTHAERAKPNAMPKQVSGISISSYHFNTKGCKTLLRRMVSQNF 1263

Query: 179  TVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRH 3
            ++VGI+K+SQRLKR+LK+YP N  L   D STA+ AL+FHP+W+DK GSG+S IKVGRH
Sbjct: 1264 SMVGIQKISQRLKRMLKQYPMNSQLTGEDRSTAIRALQFHPQWKDKIGSGVSEIKVGRH 1322


>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  409 bits (1052), Expect = e-112
 Identities = 206/360 (57%), Positives = 262/360 (72%), Gaps = 3/360 (0%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVDI 894
            I++++CSEAD +     CI+A L    +   D++ILRDMV+P LL+TV+KGF EFKKVDI
Sbjct: 984  ISTKLCSEADVKRSDSFCIAAKLIMKHEKFSDMEILRDMVVPVLLKTVIKGFPEFKKVDI 1043

Query: 893  LWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLL 714
            LWK+  ++ K  +  SGEL++RV MS+YC+  KFWS+L+D CL IRN+IDWERS PD +L
Sbjct: 1044 LWKDEPNHEKVARRTSGELFIRVSMSEYCDPNKFWSNLVDSCLRIRNLIDWERSLPDDIL 1103

Query: 713  DYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQR 534
            DY  A GI  AWQ FV +LH++I DTGK+ILPEHL+VTANCLSATGEF+ LN +GL  QR
Sbjct: 1104 DYSNAFGISSAWQSFVKNLHSSIIDTGKTILPEHLIVTANCLSATGEFVALNAKGLVNQR 1163

Query: 533  KETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYKG 354
            KE +I SPF+QA F NPSD FVKAAKA Q D L GS+EAL+WGQTP IGTGC+F+++YKG
Sbjct: 1164 KEIDIRSPFNQATFLNPSDTFVKAAKACQTDDLVGSVEALSWGQTPRIGTGCQFDLIYKG 1223

Query: 353  KGHEPAGRADVYTLLSTHLKSAKVGAEVKQVCRKSIASYHLDSKGQNNLLRDMLS---RC 183
            KGHE A   DVY LL +H   AK   + + +  KS    H  +  Q+    + LS     
Sbjct: 1224 KGHETAKNEDVYGLLISHDGRAKSNVKERSLSMKSSNPLHGINTQQHKSWLERLSANMNH 1283

Query: 182  FTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGRH 3
             +V+GIKK+SQ+LKRILKEYP +R L+  D STA+ AL+FHP+W +K GSGI  IKVG H
Sbjct: 1284 LSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTALQFHPRWPEKIGSGIQEIKVGLH 1343


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  384 bits (987), Expect = e-104
 Identities = 199/370 (53%), Positives = 261/370 (70%), Gaps = 13/370 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTDSI-ICISAALTE---------SIQNIPDVDILRDMVIPALLQTVVK 924
            I ++ CSEAD   DS  ICIS A+++         S++    +D LR+MVIP LL+TVVK
Sbjct: 706  IENKDCSEADFHEDSSRICISVAVSQNELSNLHFGSLKEYEILDYLRNMVIPVLLRTVVK 765

Query: 923  GFLEFKKVDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIID 744
            GF EFKKVDILWK+    S+F KC SGE Y+RV MS+ CE  +FW+ L++K L IR++ID
Sbjct: 766  GFPEFKKVDILWKDEQSRSRFSKCSSGEPYVRVFMSENCERARFWNILVEKSLRIRSLID 825

Query: 743  WERSHPDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLP 564
            W+RSHPD + DY EA GID AW  FVNSL++AIS+TGK+ILPEHL+ TANCLS TGEF+ 
Sbjct: 826  WDRSHPDDVHDYGEAFGIDTAWMCFVNSLNSAISETGKTILPEHLIATANCLSMTGEFVS 885

Query: 563  LNPRGLAQQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGT 384
            LN +GLAQQRKE  I SPF QACF+NPSDCF+KAAK  Q+D LQGS+++LAWGQTP IGT
Sbjct: 886  LNAKGLAQQRKEATINSPFVQACFSNPSDCFIKAAKMGQMDNLQGSVDSLAWGQTPPIGT 945

Query: 383  GCEFNILYKGKGHEPAGRADVYTLLSTHLKSAKVGAEVK---QVCRKSIASYHLDSKGQN 213
            G +F+I+Y GKGHEP+   DVY+LL++ +  AK   ++K   Q    +  S +L + G+ 
Sbjct: 946  GGQFDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKLPVQFTSGNDQSQNLKTNGRK 1005

Query: 212  NLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGS 33
              L  M S       I++VS  LKR+L EY ++  L   D + A+ AL++HP+W++K G+
Sbjct: 1006 RFLAGMKSLRSAEDEIREVSLALKRMLHEYASDCQLRGEDKTLALRALQYHPRWEEKTGA 1065

Query: 32   GISHIKVGRH 3
            G   IKVGRH
Sbjct: 1066 GTVEIKVGRH 1075


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  337 bits (865), Expect = 4e-90
 Identities = 186/371 (50%), Positives = 249/371 (67%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD-SIICISAALTESIQNIPDV-DILRDMVIPALLQTVVKGFLEFKKV 900
            IT + CS A+++ + S ICI+ ++ E+ ++   + D LRD+VIP LL+TV+KGF  FKKV
Sbjct: 813  ITCKDCSVAEARKEKSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKV 872

Query: 899  DILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDV 720
            DILWKE    SK  +  +GELYL+V MS+ C+  KFW++L+D CL IR++IDWERS+PD 
Sbjct: 873  DILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 932

Query: 719  LLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQ 540
            + D   A GIDVAW+YF+  LH+A+S+TGK ILPEHLV+ A+ L+ATGEF+PL+ +GL  
Sbjct: 933  VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTL 992

Query: 539  QRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILY 360
            QRK   + SPF QACF+NP D FV+AAK    D LQGSLE+LAWG+TPSIGTG  F+I+Y
Sbjct: 993  QRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIY 1052

Query: 359  KGKGHEPAGRADVYTLLSTHLKSA--KV--------GAEVKQVCRKSIASYHLDSKGQNN 210
             GKG+EPA   DVYTLL  H+ S   KV        G + K + R+      L+ K   +
Sbjct: 1053 SGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNKKSCKS 1112

Query: 209  LLRDMLSRCF-TVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGS 33
                   R F +   IKK+SQ LK++L +Y  +R LN  D   AM+AL+FHP+  +K G 
Sbjct: 1113 EWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGK 1172

Query: 32   GI-SHIKVGRH 3
            G    IK+G H
Sbjct: 1173 GAPQEIKIGYH 1183


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  337 bits (865), Expect = 4e-90
 Identities = 186/371 (50%), Positives = 249/371 (67%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD-SIICISAALTESIQNIPDV-DILRDMVIPALLQTVVKGFLEFKKV 900
            IT + CS A+++ + S ICI+ ++ E+ ++   + D LRD+VIP LL+TV+KGF  FKKV
Sbjct: 1026 ITCKDCSVAEARKEKSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKV 1085

Query: 899  DILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDV 720
            DILWKE    SK  +  +GELYL+V MS+ C+  KFW++L+D CL IR++IDWERS+PD 
Sbjct: 1086 DILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 1145

Query: 719  LLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQ 540
            + D   A GIDVAW+YF+  LH+A+S+TGK ILPEHLV+ A+ L+ATGEF+PL+ +GL  
Sbjct: 1146 VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTL 1205

Query: 539  QRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILY 360
            QRK   + SPF QACF+NP D FV+AAK    D LQGSLE+LAWG+TPSIGTG  F+I+Y
Sbjct: 1206 QRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIY 1265

Query: 359  KGKGHEPAGRADVYTLLSTHLKSA--KV--------GAEVKQVCRKSIASYHLDSKGQNN 210
             GKG+EPA   DVYTLL  H+ S   KV        G + K + R+      L+ K   +
Sbjct: 1266 SGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNKKSCKS 1325

Query: 209  LLRDMLSRCF-TVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGS 33
                   R F +   IKK+SQ LK++L +Y  +R LN  D   AM+AL+FHP+  +K G 
Sbjct: 1326 EWSITKLRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGK 1385

Query: 32   GI-SHIKVGRH 3
            G    IK+G H
Sbjct: 1386 GAPQEIKIGYH 1396


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  330 bits (847), Expect = 5e-88
 Identities = 184/371 (49%), Positives = 246/371 (66%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD-SIICISAALTESIQNIPDV-DILRDMVIPALLQTVVKGFLEFKKV 900
            IT + CS A+ Q + S ICI+ ++ E+ ++   + D LRD+VIP LL+TV+KGF  FKKV
Sbjct: 1026 ITCKDCSVAEVQKEKSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKV 1085

Query: 899  DILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDV 720
            DILWKE    SK  +  +GELYL+V MS+ C+  KFW++L+D CL IR++IDWERS+PD 
Sbjct: 1086 DILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 1145

Query: 719  LLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQ 540
            + D   A GIDVAW+YF+  LH+A+S+TGK ILPEHLV+ A+ L+ TGEF+PL+ +GL  
Sbjct: 1146 VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTL 1205

Query: 539  QRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILY 360
            QRK   + SPF QACFTNP D FV+AAK    D LQGSLE+LAWG+TPSIGTG  F+I+Y
Sbjct: 1206 QRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMY 1265

Query: 359  KGKGHEPAGRADVYTLL----STHLKSAKV------GAEVKQVCRKSIASYHLDSKG-QN 213
             GKG+E A + +VYTLL    +    + KV      G +   + R+      LD K  ++
Sbjct: 1266 SGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKKSCKS 1325

Query: 212  NLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGS 33
             L    L   F+   IKK+SQ LK++L +Y   R LN  D   AM+AL+FHP+  +K G 
Sbjct: 1326 ELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNEKIGK 1385

Query: 32   GI-SHIKVGRH 3
            G    IK+G H
Sbjct: 1386 GAPKEIKIGYH 1396


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  330 bits (847), Expect = 5e-88
 Identities = 184/371 (49%), Positives = 246/371 (66%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD-SIICISAALTESIQNIPDV-DILRDMVIPALLQTVVKGFLEFKKV 900
            IT + CS A+ Q + S ICI+ ++ E+ ++   + D LRD+VIP LL+TV+KGF  FKKV
Sbjct: 718  ITCKDCSVAEVQKEKSEICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKV 777

Query: 899  DILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDV 720
            DILWKE    SK  +  +GELYL+V MS+ C+  KFW++L+D CL IR++IDWERS+PD 
Sbjct: 778  DILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDD 837

Query: 719  LLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQ 540
            + D   A GIDVAW+YF+  LH+A+S+TGK ILPEHLV+ A+ L+ TGEF+PL+ +GL  
Sbjct: 838  VHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTL 897

Query: 539  QRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILY 360
            QRK   + SPF QACFTNP D FV+AAK    D LQGSLE+LAWG+TPSIGTG  F+I+Y
Sbjct: 898  QRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGTGSSFDIMY 957

Query: 359  KGKGHEPAGRADVYTLL----STHLKSAKV------GAEVKQVCRKSIASYHLDSKG-QN 213
             GKG+E A + +VYTLL    +    + KV      G +   + R+      LD K  ++
Sbjct: 958  SGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDKKSCKS 1017

Query: 212  NLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGS 33
             L    L   F+   IKK+SQ LK++L +Y   R LN  D   AM+AL+FHP+  +K G 
Sbjct: 1018 ELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRRNEKIGK 1077

Query: 32   GI-SHIKVGRH 3
            G    IK+G H
Sbjct: 1078 GAPKEIKIGYH 1088


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  315 bits (808), Expect = 2e-83
 Identities = 171/364 (46%), Positives = 231/364 (63%), Gaps = 7/364 (1%)
 Frame = -1

Query: 1073 ITSEVCSEADSQT--DSIICISAALTESIQNIPD-VDILRDMVIPALLQTVVKGFLEFKK 903
            ITS+ CS A +    D   CI+  + E+ +N  + +DI RD+VIP LL TVVKGFLE KK
Sbjct: 941  ITSKGCSAAQTCNGDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKK 1000

Query: 902  VDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPD 723
            VDILW +    SK     SGELYLRV MS      + WS L+D CL I ++IDW RSHPD
Sbjct: 1001 VDILWNDHPRESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPD 1060

Query: 722  VLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLA 543
             + DY  A GID  W+YF+N+L TA +D GK ILP+HL++ A+CLSATGEF+ LN +G+A
Sbjct: 1061 NVHDYCIAYGIDAGWKYFLNNLETAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIA 1120

Query: 542  QQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNIL 363
            QQ+  T++ SPF QACF++P  CF+KAAK   VD L GS+EALAWG TP  GTG +F+IL
Sbjct: 1121 QQKGHTSVSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDIL 1180

Query: 362  YKGKGHEPAGRADVYTLLSTHLKSAKVGA-EVKQVCRKSIASYHLDSKG---QNNLLRDM 195
            Y  +G   +   + Y LL + + S++  A E  +    ++    + S G     ++ + +
Sbjct: 1181 YSKEGLNLSKPLNPYDLLGSQISSSRENAFETSKAWNNTLDKCDVTSIGLEKSESVFKSV 1240

Query: 194  LSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIK 15
            + +  T+  I+K +Q LKRIL++Y  N  L   D S   +AL FHP   DK GSG+  IK
Sbjct: 1241 IRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSGVQDIK 1300

Query: 14   VGRH 3
            VG+H
Sbjct: 1301 VGQH 1304


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  308 bits (790), Expect = 2e-81
 Identities = 166/372 (44%), Positives = 232/372 (62%), Gaps = 15/372 (4%)
 Frame = -1

Query: 1073 ITSEVCS-EADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVD 897
            ITS+ C  + + +     CI+ ++  S ++   +D +RD+VIP LL  VVKG L+ KKVD
Sbjct: 1069 ITSKDCFVDMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVD 1128

Query: 896  ILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVL 717
            ILW +  D+    K  SG LYLRV +S  C    FW  L+D CL I ++IDWERSHPD +
Sbjct: 1129 ILWNDNPDSDVL-KSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNI 1187

Query: 716  LDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQ 537
             D +   GID  W+YF+NSL +AISD GK++LPEHL++ A+CLSATGEF+ LN +G+A+Q
Sbjct: 1188 HDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQ 1247

Query: 536  RKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYK 357
            ++ T+I SPF Q CF++P  CF+KA K    D L GSL+ALAWG+ PS+G+G  F+ILY 
Sbjct: 1248 KELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYS 1307

Query: 356  GKGHEPAGRADVYTLL----STHLKSAKVGA-----EVKQVCRKSIASYHLDS-----KG 219
             KGHE A   D+Y LL    S H ++ KV       +    C   +   + DS     K 
Sbjct: 1308 AKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKS 1367

Query: 218  QNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKR 39
               + + +L    ++  I+K+S+RLK IL++YP N  L+  D +T M+AL FHP+  +K 
Sbjct: 1368 LEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKI 1427

Query: 38   GSGISHIKVGRH 3
            G G  +IKV  H
Sbjct: 1428 GPGAQNIKVRYH 1439


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  299 bits (766), Expect = 1e-78
 Identities = 162/378 (42%), Positives = 239/378 (63%), Gaps = 21/378 (5%)
 Frame = -1

Query: 1073 ITSEVCS-----EADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEF 909
            I S+ CS     E D+ T    CI+ ++  S  ++  +  ++D++IP LL+T+VKGF E 
Sbjct: 978  IRSKDCSVPATREEDNDT---CCITVSIECSKNSVIQLITVQDLLIPFLLETIVKGFREI 1034

Query: 908  KKVDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSH 729
            +KVDILW + S+ SK  +  SGELYL+V MS    +  +WS+L++ CL I ++IDW RSH
Sbjct: 1035 EKVDILWSDRSNTSKATRDSSGELYLKVSMSGDSGVKSYWSTLMNDCLRIMDLIDWSRSH 1094

Query: 728  PDVLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRG 549
            P+ + ++    GID  W++F+N+L +A+SD GK+ILPEHL++ AN LS TG F+ L P+G
Sbjct: 1095 PENVNEFCSVYGIDSGWKFFLNNLESAVSDVGKTILPEHLLLVANTLSVTGNFVGLTPKG 1154

Query: 548  LAQQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFN 369
            LA+QR+  ++ +PFSQACF+NP+ CF+KAAKAE  DGL G+L+ALAWG  P +GTG +F 
Sbjct: 1155 LARQREHASVATPFSQACFSNPAACFIKAAKAEVTDGLHGTLDALAWGNIPPLGTGGQFE 1214

Query: 368  ILYKGKGHEPAGRADVYTLLSTHL----------------KSAKVGAEVKQVCRKSIASY 237
            +++ GKGHE     +VY +L+T +                +S K GA +  +  KS+ S 
Sbjct: 1215 LVFSGKGHEVDKPINVYDMLATGISPDVQGVNETPDAKNHRSVKFGALL--LYDKSV-SQ 1271

Query: 236  HLDSKGQNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHP 57
             L   G   + +D + + F +  I  +S  L +IL +YP N+ L+  D ST MIAL FHP
Sbjct: 1272 GLKKLG---ISKDRIKKLFKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFHP 1328

Query: 56   KWQDKRGSGISHIKVGRH 3
            +  +K G+G   IKV  H
Sbjct: 1329 RIDEKIGTGFQDIKVAYH 1346


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  298 bits (762), Expect = 3e-78
 Identities = 168/368 (45%), Positives = 224/368 (60%), Gaps = 16/368 (4%)
 Frame = -1

Query: 1058 CSEADSQT-DSIICISAALTE-SIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVDILWK 885
            CS  D    D   CI+  + E S  +  ++D++RDMVIP LL+ V+KGF E KKVDILWK
Sbjct: 1065 CSHIDMPNEDDTFCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWK 1124

Query: 884  EGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYY 705
            +    SK  K   GELYLRV +S    ITK W  L++ CL I ++IDW RSHPD +    
Sbjct: 1125 DRLKVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLC 1184

Query: 704  EANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQRKET 525
             A GID  W++F+N+L +AISDTGK+IL EHL+V ANCLSATGEF+ LN +GL QQR+  
Sbjct: 1185 LAYGIDAGWKFFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQREHA 1244

Query: 524  NIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYKGKGH 345
             + SPF QACF+NPS  FVKAAK    D LQG+++ALAWG+ P IGTG +F+I+Y  K  
Sbjct: 1245 YVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQ 1304

Query: 344  EPAGRADVYTLLSTHLKSAKVGAEVK-----QVCRKSIASYHLDSKGQN---------NL 207
              A   DVY LL + + S K   E +         +   S  +D+ G +           
Sbjct: 1305 RLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELKKIETK 1364

Query: 206  LRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI 27
             R +     T+  I+++S+ L+ IL +YP +  L+  D +T M+AL FHP+  +K GSG 
Sbjct: 1365 RRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGA 1424

Query: 26   SHIKVGRH 3
              IKVG H
Sbjct: 1425 QEIKVGYH 1432


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  286 bits (731), Expect = 1e-74
 Identities = 160/372 (43%), Positives = 224/372 (60%), Gaps = 15/372 (4%)
 Frame = -1

Query: 1073 ITSEVCS-EADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVD 897
            ITS+ C  + + +     CI+ ++  S ++   +D +RD+VIP LL  VVKG    K  D
Sbjct: 938  ITSKDCFVDMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGCC-IKNSD 996

Query: 896  ILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVL 717
            +L           K  SG LYLRV +S  C    FW  L+D CL I ++IDWERSHPD +
Sbjct: 997  VL-----------KSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNI 1045

Query: 716  LDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQ 537
             D +   GID  W+YF+NSL +AISD GK++LPEHL++ A+CLSATGEF+ LN +G+A+Q
Sbjct: 1046 HDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQ 1105

Query: 536  RKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYK 357
            ++ T+I SPF Q CF++P  CF+KA K    D L GSL+ALAWG+ PS+G+G  F+ILY 
Sbjct: 1106 KELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYS 1165

Query: 356  GKGHEPAGRADVYTLL----STHLKSAKVGA-----EVKQVCRKSIASYHLDS-----KG 219
             KGHE A   D+Y LL    S H ++ KV       +    C   +   + DS     K 
Sbjct: 1166 AKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKS 1225

Query: 218  QNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKR 39
               + + +L    ++  I+K+S+RLK IL++YP N  L+  D +T M+AL FHP+  +K 
Sbjct: 1226 LEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKI 1285

Query: 38   GSGISHIKVGRH 3
            G G  +IKV  H
Sbjct: 1286 GPGAQNIKVRYH 1297


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  285 bits (730), Expect = 2e-74
 Identities = 158/371 (42%), Positives = 222/371 (59%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD--SIICISAALTESIQNIP-DVDILRDMVIPALLQTVVKGFLEFKK 903
            I+++ CS  + Q +     C++  + E+ +    D++ ++  V+P LL+TVVKGF E KK
Sbjct: 1021 ISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKK 1080

Query: 902  VDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPD 723
            VDILWK+    SK      GELYLRV MS  C IT  WS+L++ C  I ++IDW RSHPD
Sbjct: 1081 VDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPD 1140

Query: 722  VLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLA 543
             +  +  A GID   Q+F+ +L +AISDTGK+ILPEHL++ AN LSATGEF+ LN +GLA
Sbjct: 1141 NIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA 1200

Query: 542  QQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNIL 363
             QRK +++ SPF QA F+NP   F+KAAKA  VD LQGS++AL WG+ PS+GTG  F+I+
Sbjct: 1201 LQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDII 1260

Query: 362  YKGKGHEPAGRADVYTLLST--------HLKSAKVGAEVKQVCRKSIASYHLDSKGQ--- 216
            Y G+G   +   DVY LLST         LK  K    +   C      +     G    
Sbjct: 1261 YSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDF 1320

Query: 215  NNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRG 36
              + R +L + +T   + ++S  LK+IL +Y   + L+  D +T + AL FHP+  +K G
Sbjct: 1321 ETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLG 1380

Query: 35   SGISHIKVGRH 3
                 I+V  H
Sbjct: 1381 IEPPDIEVTYH 1391


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  285 bits (730), Expect = 2e-74
 Identities = 158/371 (42%), Positives = 222/371 (59%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD--SIICISAALTESIQNIP-DVDILRDMVIPALLQTVVKGFLEFKK 903
            I+++ CS  + Q +     C++  + E+ +    D++ ++  V+P LL+TVVKGF E KK
Sbjct: 1059 ISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKK 1118

Query: 902  VDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPD 723
            VDILWK+    SK      GELYLRV MS  C IT  WS+L++ C  I ++IDW RSHPD
Sbjct: 1119 VDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPD 1178

Query: 722  VLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLA 543
             +  +  A GID   Q+F+ +L +AISDTGK+ILPEHL++ AN LSATGEF+ LN +GLA
Sbjct: 1179 NIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA 1238

Query: 542  QQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNIL 363
             QRK +++ SPF QA F+NP   F+KAAKA  VD LQGS++AL WG+ PS+GTG  F+I+
Sbjct: 1239 LQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDII 1298

Query: 362  YKGKGHEPAGRADVYTLLST--------HLKSAKVGAEVKQVCRKSIASYHLDSKGQ--- 216
            Y G+G   +   DVY LLST         LK  K    +   C      +     G    
Sbjct: 1299 YSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDF 1358

Query: 215  NNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRG 36
              + R +L + +T   + ++S  LK+IL +Y   + L+  D +T + AL FHP+  +K G
Sbjct: 1359 ETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLG 1418

Query: 35   SGISHIKVGRH 3
                 I+V  H
Sbjct: 1419 IEPPDIEVTYH 1429


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  285 bits (730), Expect = 2e-74
 Identities = 158/371 (42%), Positives = 222/371 (59%), Gaps = 14/371 (3%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTD--SIICISAALTESIQNIP-DVDILRDMVIPALLQTVVKGFLEFKK 903
            I+++ CS  + Q +     C++  + E+ +    D++ ++  V+P LL+TVVKGF E KK
Sbjct: 1021 ISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKK 1080

Query: 902  VDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPD 723
            VDILWK+    SK      GELYLRV MS  C IT  WS+L++ C  I ++IDW RSHPD
Sbjct: 1081 VDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPD 1140

Query: 722  VLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLA 543
             +  +  A GID   Q+F+ +L +AISDTGK+ILPEHL++ AN LSATGEF+ LN +GLA
Sbjct: 1141 NIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA 1200

Query: 542  QQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNIL 363
             QRK +++ SPF QA F+NP   F+KAAKA  VD LQGS++AL WG+ PS+GTG  F+I+
Sbjct: 1201 LQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDII 1260

Query: 362  YKGKGHEPAGRADVYTLLST--------HLKSAKVGAEVKQVCRKSIASYHLDSKGQ--- 216
            Y G+G   +   DVY LLST         LK  K    +   C      +     G    
Sbjct: 1261 YSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDF 1320

Query: 215  NNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRG 36
              + R +L + +T   + ++S  LK+IL +Y   + L+  D +T + AL FHP+  +K G
Sbjct: 1321 ETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLG 1380

Query: 35   SGISHIKVGRH 3
                 I+V  H
Sbjct: 1381 IEPPDIEVTYH 1391


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  282 bits (721), Expect = 2e-73
 Identities = 156/373 (41%), Positives = 224/373 (60%), Gaps = 16/373 (4%)
 Frame = -1

Query: 1073 ITSEVCSEADSQTDS--IICISAALTESIQN-IPDVDILRDMVIPALLQTVVKGFLEFKK 903
            I ++ C  ADS T+    +C++  + E+ +N    +D ++D++I  LL TV++GF E  +
Sbjct: 1047 IITQDCPLADSLTEDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDR 1106

Query: 902  VDILWKEGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPD 723
            VDI W +     K P+C  GELYLRV MS     ++FW++L++ CLPI ++IDW RSHPD
Sbjct: 1107 VDITWNDRPKVPK-PRCSHGELYLRVTMSGEGN-SRFWATLMNNCLPIMDLIDWTRSHPD 1164

Query: 722  VLLDYYEANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLA 543
                   A GID  W+YF+NSL +A  D GK+I  EHL++ +N LSATGEF+ LN +GL 
Sbjct: 1165 NTHSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLT 1224

Query: 542  QQRKETNIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNIL 363
             QR+   + +PF QACF++P  C +KAAKA   D L GSL+ALAWG+ PS+GTG +F+IL
Sbjct: 1225 HQREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDIL 1284

Query: 362  YKGKGHEPAGRADVYTLLSTHLKSAKVGAEVKQVCRKSIASYHLDS-------------K 222
            Y GKGHE     DVY LL       K   +++ + + +I+  +                K
Sbjct: 1285 YSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDKNTISEKYSAQLMLKNGGSTIKGLK 1344

Query: 221  GQNNLLRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDK 42
              +++ + +L +  T+  I+K+S  L+ IL +Y  N  LN  D ST M+AL FHP   +K
Sbjct: 1345 RLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEK 1404

Query: 41   RGSGISHIKVGRH 3
             G G   IKVG H
Sbjct: 1405 IGVGAQDIKVGSH 1417


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031869|gb|ESW30448.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  278 bits (712), Expect = 2e-72
 Identities = 157/368 (42%), Positives = 214/368 (58%), Gaps = 14/368 (3%)
 Frame = -1

Query: 1064 EVCSEADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVDILWK 885
            ++C + +   D   CI+  + E+ +N   ++ +RD++IP  L T +KGF++ KKVDILW 
Sbjct: 1046 DICIDKEDSDD---CITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWN 1102

Query: 884  EGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYY 705
              S  +      SGELYLRV ++      +FW  L++ C  I  IIDW RSHPD +    
Sbjct: 1103 NQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLS 1162

Query: 704  EANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQRKET 525
             A GIDVAWQY+  SL +AISDTGKSILP+HL + AN +SA+GEF+ LN +G+AQQR+  
Sbjct: 1163 SAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHA 1222

Query: 524  NIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYKGKGH 345
            ++ SPF QACF+NP   F+KAAK+E  D LQGSL+ALAWG  PS+GT   F+I+Y  KGH
Sbjct: 1223 SVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGH 1282

Query: 344  EPAGRADVYTLLSTHL--------------KSAKVGAEVKQVCRKSIASYHLDSKGQNNL 207
            E     DVY LL                   S K G+E     R        + K   N+
Sbjct: 1283 EVDKAVDVYKLLEASFDKPNNKIGFHAHNNSSGKCGSEF----RHKNGYAFKEGKQWKNI 1338

Query: 206  LRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI 27
            LR+ +    TV  I+K++   + IL +Y  +  L+  D ST +  L FHP+  +K G G 
Sbjct: 1339 LRNFV----TVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGP 1394

Query: 26   SHIKVGRH 3
              IKVG H
Sbjct: 1395 QDIKVGWH 1402


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031868|gb|ESW30447.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  278 bits (712), Expect = 2e-72
 Identities = 157/368 (42%), Positives = 214/368 (58%), Gaps = 14/368 (3%)
 Frame = -1

Query: 1064 EVCSEADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVDILWK 885
            ++C + +   D   CI+  + E+ +N   ++ +RD++IP  L T +KGF++ KKVDILW 
Sbjct: 1045 DICIDKEDSDD---CITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWN 1101

Query: 884  EGSDNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYY 705
              S  +      SGELYLRV ++      +FW  L++ C  I  IIDW RSHPD +    
Sbjct: 1102 NQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLS 1161

Query: 704  EANGIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQRKET 525
             A GIDVAWQY+  SL +AISDTGKSILP+HL + AN +SA+GEF+ LN +G+AQQR+  
Sbjct: 1162 SAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHA 1221

Query: 524  NIYSPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYKGKGH 345
            ++ SPF QACF+NP   F+KAAK+E  D LQGSL+ALAWG  PS+GT   F+I+Y  KGH
Sbjct: 1222 SVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGH 1281

Query: 344  EPAGRADVYTLLSTHL--------------KSAKVGAEVKQVCRKSIASYHLDSKGQNNL 207
            E     DVY LL                   S K G+E     R        + K   N+
Sbjct: 1282 EVDKAVDVYKLLEASFDKPNNKIGFHAHNNSSGKCGSEF----RHKNGYAFKEGKQWKNI 1337

Query: 206  LRDMLSRCFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGI 27
            LR+ +    TV  I+K++   + IL +Y  +  L+  D ST +  L FHP+  +K G G 
Sbjct: 1338 LRNFV----TVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGP 1393

Query: 26   SHIKVGRH 3
              IKVG H
Sbjct: 1394 QDIKVGWH 1401


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  278 bits (711), Expect = 3e-72
 Identities = 152/361 (42%), Positives = 216/361 (59%), Gaps = 10/361 (2%)
 Frame = -1

Query: 1055 SEADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVDILWKEGS 876
            +  D + D   CI+  + E+  N   +D++R+M+IP LL+T +KG  E KKVDILWK+ S
Sbjct: 1055 TSVDKEIDGEDCITVTIVENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLS 1114

Query: 875  DNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEAN 696
              SK     SGELYLRV MS   +   FW +LI+ C  I  +IDW RSHPD +  +  A 
Sbjct: 1115 KGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAF 1174

Query: 695  GIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQRKETNIY 516
            GID  WQ+F+++L +A SDTG SILP+HL + AN LSA+GEF+ LN +G+A+QR   ++ 
Sbjct: 1175 GIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHASVS 1234

Query: 515  SPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYKGKGHEPA 336
            SPF QACF+NP   F+KAAK+  VD LQG+L+ LAWG   S+GT  +F+++Y  K  E A
Sbjct: 1235 SPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELA 1294

Query: 335  GRADVYTLLSTHLKSAKVGAEVKQVCRKSIASYHLDSKGQNNLLR----------DMLSR 186
               DVY LL T     ++  E+      + +S   +S+ ++   R           ++  
Sbjct: 1295 KSVDVYDLLETSFD--QLDQEINTSQSNNYSSDKCNSQFRHKKGRYAPKEPKQWKSVIRN 1352

Query: 185  CFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGR 6
              T   I+K++   + IL +YP ++ L+  D  T M  L FHP+  +K GSG  HIKVG 
Sbjct: 1353 FMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIKVGW 1412

Query: 5    H 3
            H
Sbjct: 1413 H 1413


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  278 bits (711), Expect = 3e-72
 Identities = 152/361 (42%), Positives = 216/361 (59%), Gaps = 10/361 (2%)
 Frame = -1

Query: 1055 SEADSQTDSIICISAALTESIQNIPDVDILRDMVIPALLQTVVKGFLEFKKVDILWKEGS 876
            +  D + D   CI+  + E+  N   +D++R+M+IP LL+T +KG  E KKVDILWK+ S
Sbjct: 1056 TSVDKEIDGEDCITVTIVENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLS 1115

Query: 875  DNSKFPKCRSGELYLRVVMSDYCEITKFWSSLIDKCLPIRNIIDWERSHPDVLLDYYEAN 696
              SK     SGELYLRV MS   +   FW +LI+ C  I  +IDW RSHPD +  +  A 
Sbjct: 1116 KGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAF 1175

Query: 695  GIDVAWQYFVNSLHTAISDTGKSILPEHLVVTANCLSATGEFLPLNPRGLAQQRKETNIY 516
            GID  WQ+F+++L +A SDTG SILP+HL + AN LSA+GEF+ LN +G+A+QR   ++ 
Sbjct: 1176 GIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHASVS 1235

Query: 515  SPFSQACFTNPSDCFVKAAKAEQVDGLQGSLEALAWGQTPSIGTGCEFNILYKGKGHEPA 336
            SPF QACF+NP   F+KAAK+  VD LQG+L+ LAWG   S+GT  +F+++Y  K  E A
Sbjct: 1236 SPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELA 1295

Query: 335  GRADVYTLLSTHLKSAKVGAEVKQVCRKSIASYHLDSKGQNNLLR----------DMLSR 186
               DVY LL T     ++  E+      + +S   +S+ ++   R           ++  
Sbjct: 1296 KSVDVYDLLETSFD--QLDQEINTSQSNNYSSDKCNSQFRHKKGRYAPKEPKQWKSVIRN 1353

Query: 185  CFTVVGIKKVSQRLKRILKEYPANRHLNFNDNSTAMIALKFHPKWQDKRGSGISHIKVGR 6
              T   I+K++   + IL +YP ++ L+  D  T M  L FHP+  +K GSG  HIKVG 
Sbjct: 1354 FMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIKVGW 1413

Query: 5    H 3
            H
Sbjct: 1414 H 1414