BLASTX nr result
ID: Mentha26_contig00043213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00043213
(626 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec... 75 1e-11
emb|CBI27869.3| unnamed protein product [Vitis vinifera] 75 1e-11
gb|EYU28364.1| hypothetical protein MIMGU_mgv1a013494mg [Mimulus... 75 2e-11
gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis] 74 3e-11
ref|XP_007138689.1| hypothetical protein PHAVU_009G229700g [Phas... 74 3e-11
ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|50878... 74 5e-11
ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Caps... 72 1e-10
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab... 72 1e-10
ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citr... 72 2e-10
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec... 71 2e-10
emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabi... 71 2e-10
ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana] gi|... 71 2e-10
ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Popu... 71 3e-10
ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutr... 70 4e-10
ref|XP_004513457.1| PREDICTED: cleavage and polyadenylation spec... 68 3e-09
ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation spec... 67 3e-09
ref|XP_004243736.1| PREDICTED: cleavage and polyadenylation spec... 67 3e-09
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p... 67 3e-09
ref|XP_006843177.1| hypothetical protein AMTR_s00146p00067360 [A... 66 7e-09
gb|AFK34627.1| unknown [Medicago truncatula] 64 4e-08
>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Vitis vinifera]
Length = 284
Score = 75.5 bits (184), Expect = 1e-11
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
IVPKN +LL +PLCQLHENDKTYG II+GVPQLLSK++FN I+
Sbjct: 241 IVPKNLKLLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNIID 283
>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 75.5 bits (184), Expect = 1e-11
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
IVPKN +LL +PLCQLHENDKTYG II+GVPQLLSK++FN I+
Sbjct: 248 IVPKNLKLLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNIID 290
>gb|EYU28364.1| hypothetical protein MIMGU_mgv1a013494mg [Mimulus guttatus]
Length = 219
Score = 74.7 bits (182), Expect = 2e-11
Identities = 30/44 (68%), Positives = 40/44 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIEP 494
IVPK FR+L VPLC+LH+N++TYG ISGVPQL+SK++FN++EP
Sbjct: 171 IVPKKFRILAVPLCELHDNEQTYGQTISGVPQLMSKFSFNFVEP 214
>gb|EXB38893.1| hypothetical protein L484_027328 [Morus notabilis]
Length = 221
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
IVPK+ +LL VPLCQ+HEN KTYGSIISGVPQLLSK++FN IE
Sbjct: 178 IVPKDLKLLAVPLCQVHENHKTYGSIISGVPQLLSKFSFNIIE 220
>ref|XP_007138689.1| hypothetical protein PHAVU_009G229700g [Phaseolus vulgaris]
gi|561011776|gb|ESW10683.1| hypothetical protein
PHAVU_009G229700g [Phaseolus vulgaris]
Length = 217
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
IVPKN RLL VPLCQ+HEN KTYG IISGVPQLLSK+ FN +E
Sbjct: 174 IVPKNMRLLAVPLCQVHENHKTYGEIISGVPQLLSKFCFNMME 216
>ref|XP_007012734.1| CFIM-25 isoform 1 [Theobroma cacao] gi|508783097|gb|EOY30353.1|
CFIM-25 isoform 1 [Theobroma cacao]
Length = 219
Score = 73.6 bits (179), Expect = 5e-11
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIEP 494
IVPKN +LL VPLCQ+HEN KTYG IISGVPQLLSK++ N I+P
Sbjct: 176 IVPKNLKLLAVPLCQVHENHKTYGPIISGVPQLLSKFSINIIDP 219
>ref|XP_006294960.1| hypothetical protein CARUB_v10024016mg [Capsella rubella]
gi|482563668|gb|EOA27858.1| hypothetical protein
CARUB_v10024016mg [Capsella rubella]
Length = 222
Score = 72.4 bits (176), Expect = 1e-10
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
+VPKNF+LL VPLCQLHEN+KTYG IIS +P+LLSK++FN +E
Sbjct: 179 VVPKNFKLLAVPLCQLHENEKTYGPIISQIPKLLSKFSFNMME 221
>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 72.4 bits (176), Expect = 1e-10
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
+VPKNF+LL VPLCQLHEN+KTYG IIS +P+LLSK++FN +E
Sbjct: 180 VVPKNFKLLAVPLCQLHENEKTYGPIISQIPKLLSKFSFNMME 222
>ref|XP_006451545.1| hypothetical protein CICLE_v10009459mg [Citrus clementina]
gi|568843220|ref|XP_006475514.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X1 [Citrus sinensis] gi|557554771|gb|ESR64785.1|
hypothetical protein CICLE_v10009459mg [Citrus
clementina]
Length = 214
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -2
Query: 622 VPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYI 500
VPKN +LL VPLCQ+HEN KTYG IISGVPQLLSK++FN I
Sbjct: 172 VPKNLKLLAVPLCQIHENHKTYGQIISGVPQLLSKFSFNII 212
>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Cucumis sativus]
Length = 217
Score = 71.2 bits (173), Expect = 2e-10
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYI 500
+VPKN +L+ VPLCQ+HEN KTYG IISG+PQLLSK++FN I
Sbjct: 174 VVPKNLKLIAVPLCQIHENHKTYGPIISGIPQLLSKFSFNII 215
>emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|7269881|emb|CAB79740.1| mRNA cleavage factor
subunit-like protein [Arabidopsis thaliana]
Length = 185
Score = 71.2 bits (173), Expect = 2e-10
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
+VPKNF+LL VPLCQLHEN+KTYG I+S +P+LLSK++FN +E
Sbjct: 142 VVPKNFKLLAVPLCQLHENEKTYGPIMSQIPKLLSKFSFNMME 184
>ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60
[Arabidopsis thaliana] gi|20147173|gb|AAM10303.1|
AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|21554114|gb|AAM63194.1| mRNA cleavage factor
subunit-like protein [Arabidopsis thaliana]
gi|332660282|gb|AEE85682.1| CFIM-25-like protein
[Arabidopsis thaliana]
Length = 222
Score = 71.2 bits (173), Expect = 2e-10
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
+VPKNF+LL VPLCQLHEN+KTYG I+S +P+LLSK++FN +E
Sbjct: 179 VVPKNFKLLAVPLCQLHENEKTYGPIMSQIPKLLSKFSFNMME 221
>ref|XP_002308275.2| hypothetical protein POPTR_0006s14840g [Populus trichocarpa]
gi|550336365|gb|EEE91798.2| hypothetical protein
POPTR_0006s14840g [Populus trichocarpa]
Length = 258
Score = 70.9 bits (172), Expect = 3e-10
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFN 506
IVPKN +LL VPLCQ+HEN KTYG +ISGVPQLLSK++FN
Sbjct: 216 IVPKNLKLLAVPLCQVHENHKTYGPVISGVPQLLSKFSFN 255
>ref|XP_006412803.1| hypothetical protein EUTSA_v10026187mg [Eutrema salsugineum]
gi|557113973|gb|ESQ54256.1| hypothetical protein
EUTSA_v10026187mg [Eutrema salsugineum]
Length = 222
Score = 70.5 bits (171), Expect = 4e-10
Identities = 29/43 (67%), Positives = 39/43 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
+VPKNF+LL VPLCQ+HEN+KTYG IIS +P+LLS+++FN +E
Sbjct: 179 VVPKNFKLLAVPLCQIHENEKTYGPIISQIPKLLSRFSFNMME 221
>ref|XP_004513457.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X3 [Cicer arietinum]
Length = 202
Score = 67.8 bits (164), Expect = 3e-09
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -2
Query: 622 VPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYIE 497
VP+N +LL VPLCQ+HEN KTYG IIS +PQLLSK++FN IE
Sbjct: 160 VPRNMKLLSVPLCQIHENHKTYGPIISRIPQLLSKFSFNMIE 201
>ref|XP_006342337.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum tuberosum]
Length = 202
Score = 67.4 bits (163), Expect = 3e-09
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFN 506
IVPKN +L+ VPLCQ+HEN KTYG II+GVPQLLSK+++N
Sbjct: 158 IVPKNLKLIAVPLCQVHENFKTYGPIIAGVPQLLSKFSYN 197
>ref|XP_004243736.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum lycopersicum]
Length = 202
Score = 67.4 bits (163), Expect = 3e-09
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFN 506
IVPKN +L+ VPLCQ+HEN KTYG II+GVPQLLSK+++N
Sbjct: 158 IVPKNLKLIAVPLCQVHENFKTYGPIIAGVPQLLSKFSYN 197
>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 214
Score = 67.4 bits (163), Expect = 3e-09
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYI 500
IVPKN +LL VPL Q+H+N KTYG IISGVPQLLSKY+F I
Sbjct: 171 IVPKNLKLLAVPLSQIHDNHKTYGGIISGVPQLLSKYSFRII 212
>ref|XP_006843177.1| hypothetical protein AMTR_s00146p00067360 [Amborella trichopoda]
gi|548845401|gb|ERN04852.1| hypothetical protein
AMTR_s00146p00067360 [Amborella trichopoda]
Length = 293
Score = 66.2 bits (160), Expect = 7e-09
Identities = 27/42 (64%), Positives = 38/42 (90%)
Frame = -2
Query: 625 IVPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYI 500
IVPKN +LL VPL +LH+N KTYGS+I+G+PQLLS+++FN++
Sbjct: 250 IVPKNLKLLAVPLFELHDNKKTYGSMIAGIPQLLSRFSFNFV 291
>gb|AFK34627.1| unknown [Medicago truncatula]
Length = 205
Score = 63.9 bits (154), Expect = 4e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -2
Query: 622 VPKNFRLLVVPLCQLHENDKTYGSIISGVPQLLSKYAFNYI 500
VPKN +LL VPLCQ+ +N KTYG IIS VPQLLSK++FN I
Sbjct: 163 VPKNMKLLSVPLCQIRDNHKTYGPIISAVPQLLSKFSFNMI 203