BLASTX nr result

ID: Mentha26_contig00043063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00043063
         (696 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345375.1| PREDICTED: trinucleotide repeat-containing g...    63   8e-08
ref|XP_006368584.1| hypothetical protein POPTR_0001s05850g [Popu...    59   2e-06

>ref|XP_006345375.1| PREDICTED: trinucleotide repeat-containing gene 6B protein-like
           [Solanum tuberosum]
          Length = 619

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
 Frame = +2

Query: 5   KDNAWRS-GNESWGWPQGIDNNRSSSFVGHGCGNSWNCNEKTVS-VRQSEWGQGQRGNNS 178
           KD AW   GNESWGW  G++     + V +   N W+ +   VS  + +EW     G  S
Sbjct: 441 KDTAWGGCGNESWGWNTGMNYENGYACVDNSFSNLWHQSGACVSGAKGNEWVDNSVG--S 498

Query: 179 WSSRPWN------KNAEGMASFQNNNLIG----SKERGWRDDRNVSWGVTNAEYQGNEAK 328
           W    WN      +N++  + +  N   G    SK+R WR     SW       Q NE  
Sbjct: 499 WGQTYWNTGGHEQRNSDYGSRWNRNLSRGGGTTSKDRRWRGSEVTSWDYQQQPRQSNERN 558

Query: 329 -NWDPNFXXXXXXXXXXXXXESTVQHTSKYKSSRYLGD 439
            ++                 ES+ QH  +YKSSR+  D
Sbjct: 559 VDFGRPSRGDKTFYTGSRKRESSSQHVPRYKSSRFQSD 596


>ref|XP_006368584.1| hypothetical protein POPTR_0001s05850g [Populus trichocarpa]
           gi|550346600|gb|ERP65153.1| hypothetical protein
           POPTR_0001s05850g [Populus trichocarpa]
          Length = 394

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
 Frame = +2

Query: 26  GNESWGWPQGIDNNRSSSFVGHGCGNSWNCNEKTVSVRQSE-WGQ---GQRGNNSWSSRP 193
           GN+SWGW     N+   S   +   N W  + + V     + WG      RG N   SR 
Sbjct: 230 GNKSWGWNHS-GNHVDQSNDWNNNSNPWQHSRQGVDPANDKGWGNLRDSSRGYNQHESRK 288

Query: 194 WNKN--AEGMASFQNNNLIGSKERGWRDDRNVSWGVTNAEYQGNEAKNWD--PNFXXXXX 361
           WN +  + G   FQ +    SK+R W D+ + S G    +  G   K  D   +      
Sbjct: 289 WNNDCKSSGNGFFQGSG--ASKDRKWEDNGSNSQGWKQWDNYGKNTKGLDFRKHGGGWET 346

Query: 362 XXXXXXXXESTVQHTSKYKSSRYLGDSYQYGHQF 463
                   E   QH + Y+S+R+ GD +Q GH +
Sbjct: 347 RNEGSWQREGAHQHITGYESTRFQGDGFQTGHSW 380


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