BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00043026
         (759 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU34894.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus...   356   6e-96
gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus...   333   5e-89
ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated prot...   295   2e-77
ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated prot...   288   1e-75
ref|XP_006339935.1| PREDICTED: RNA polymerase II-associated prot...   285   9e-75
ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated prot...   285   1e-74
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   284   2e-74
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   283   5e-74
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   283   5e-74
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   281   2e-73
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              281   2e-73
ref|XP_006339934.1| PREDICTED: RNA polymerase II-associated prot...   276   7e-72
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot...   275   2e-71
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu...   265   1e-68
ref|XP_006392426.1| hypothetical protein EUTSA_v10023436mg [Eutr...   261   2e-67
ref|XP_004144746.1| PREDICTED: RNA polymerase II-associated prot...   259   5e-67
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot...   256   6e-66
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr...   254   2e-65
ref|NP_176039.2| carboxylate clamp-tetratricopeptide repeat prot...   254   3e-65
ref|NP_001185250.1| carboxylate clamp-tetratricopeptide repeat p...   254   3e-65

>gb|EYU34894.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus guttatus]
          Length = 472

 Score =  356 bits (913), Expect = 6e-96
 Identities = 182/252 (72%), Positives = 211/252 (83%), Gaps = 1/252 (0%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKL-DNPSQSSYNDSSRLPN 177
           PSKHSRD  +++EGLLNNLQDWELSFKEKDKK+R+D +G+ KL D   Q S N+  R  +
Sbjct: 5   PSKHSRDLPQELEGLLNNLQDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVGRPYD 64

Query: 178 NPRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEF 357
           + +V  ++T +KT S  N +TV+Q+DHLK+YE LS+L+S V S E  VDANSEKELGNEF
Sbjct: 65  SAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKELGNEF 124

Query: 358 FKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAY 537
           FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRYIKAY
Sbjct: 125 FKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRYIKAY 184

Query: 538 SRRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPL 717
           SRRSTARKELGKLK+S+DD EFALRLEPQN +IKKQ AE K+LLEK I+KK SGAL G +
Sbjct: 185 SRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGALTGSV 244

Query: 718 EGAHKGKVEADK 753
           EGA  GK E DK
Sbjct: 245 EGAQPGKSEVDK 256


>gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus guttatus]
          Length = 462

 Score =  333 bits (853), Expect = 5e-89
 Identities = 175/252 (69%), Positives = 201/252 (79%), Gaps = 1/252 (0%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKL-DNPSQSSYNDSSRLPN 177
           PSKHSRD            QDWELSFKEKDKK+R+D +G+ KL D   Q S N+  R  +
Sbjct: 5   PSKHSRDLP----------QDWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVGRPYD 54

Query: 178 NPRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEF 357
           + +V  ++T +KT S  N +TV+Q+DHLK+YE LS+L+S V S E  VDANSEKELGNEF
Sbjct: 55  SAKVHRKQTMEKTPSYENPSTVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKELGNEF 114

Query: 358 FKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAY 537
           FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRYIKAY
Sbjct: 115 FKQKKFTEAIDCYSRSIALSPSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRYIKAY 174

Query: 538 SRRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPL 717
           SRRSTARKELGKLK+S+DD EFALRLEPQN +IKKQ AE K+LLEK I+KK SGAL G +
Sbjct: 175 SRRSTARKELGKLKESMDDAEFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGALTGSV 234

Query: 718 EGAHKGKVEADK 753
           EGA  GK E DK
Sbjct: 235 EGAQPGKSEVDK 246


>ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
           [Solanum tuberosum]
          Length = 468

 Score =  295 bits (754), Expect = 2e-77
 Identities = 153/244 (62%), Positives = 188/244 (77%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKHSRDQ +D++GLLNNLQDWELS K KDKK+++   G+  L    +  ++ +S L  +
Sbjct: 5   PSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTS 60

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P+V+G +    TS     +    +++ K Y  +S L+S + S+E  ++ANSEKELGNE F
Sbjct: 61  PQVNGTRVGKSTSIR---SAAGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECF 117

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYS
Sbjct: 118 KQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYS 177

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLE 720
           RRST+RKELGKLK+SI+D EFALRLEPQN +IKKQ+ E KAL EKEI K+ SGA     +
Sbjct: 178 RRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEKEIRKRVSGATDVSAQ 237

Query: 721 GAHK 732
            A K
Sbjct: 238 RAQK 241


>ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
           [Solanum tuberosum]
          Length = 467

 Score =  288 bits (737), Expect = 1e-75
 Identities = 152/244 (62%), Positives = 187/244 (76%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKHSRDQ +D++GLLNNLQDWELS K KDKK+++   G+  L    +  ++ +S L  +
Sbjct: 5   PSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTS 60

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P+V+G +    TS     +    +++ K Y  +S L+S + S+E  ++ANSEKELGNE F
Sbjct: 61  PQVNGTRVGKSTSIR---SAAGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECF 117

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYS
Sbjct: 118 KQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYS 177

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLE 720
           RRST+RKELGKLK+SI+D EFALRLEPQN +IKKQ+ E KAL EK I K+ SGA     +
Sbjct: 178 RRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEK-IRKRVSGATDVSAQ 236

Query: 721 GAHK 732
            A K
Sbjct: 237 RAQK 240


>ref|XP_006339935.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
           [Solanum tuberosum]
          Length = 419

 Score =  285 bits (730), Expect = 9e-75
 Identities = 147/233 (63%), Positives = 181/233 (77%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKHSRDQ +D++GLLNNLQDWELS K KDKK+++   G+  L    +  ++ +S L  +
Sbjct: 5   PSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTS 60

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P+V+G +    TS     +    +++ K Y  +S L+S + S+E  ++ANSEKELGNE F
Sbjct: 61  PQVNGTRVGKSTSIR---SAAGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECF 117

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYS
Sbjct: 118 KQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYS 177

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASG 699
           RRST+RKELGKLK+SI+D EFALRLEPQN +IKKQ+ E KAL EKE  +   G
Sbjct: 178 RRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEKENNRDVPG 230


>ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated protein 3-like [Solanum
           lycopersicum]
          Length = 470

 Score =  285 bits (729), Expect = 1e-74
 Identities = 147/244 (60%), Positives = 185/244 (75%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PS HSRDQ +D++GL NNLQDWEL+ K KDKK+++   G+  L    +  ++ +S    +
Sbjct: 5   PSNHSRDQFQDMQGLFNNLQDWELALKGKDKKMKSQAGGKETL----KEDWSRTSEPLTS 60

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P+ +G +   K++S    N    + + K Y  +S L+S + S+E  ++ANSEKELGNE F
Sbjct: 61  PQANGTQQVGKSTSI--RNAAGPYSYSKNYNPISHLSSELISEESNINANSEKELGNECF 118

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYS
Sbjct: 119 KQKKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYS 178

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLE 720
           RRST+RKELGKLK+SI+D EFAL LEP+N +IKKQ+ E KAL EKEI+K+ SGA     +
Sbjct: 179 RRSTSRKELGKLKESIEDAEFALWLEPRNPEIKKQYGEVKALYEKEILKRVSGATDVSAQ 238

Query: 721 GAHK 732
           G  K
Sbjct: 239 GPQK 242


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  284 bits (727), Expect = 2e-74
 Identities = 150/248 (60%), Positives = 186/248 (75%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4   SKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNNP 183
           SKHSRDQ  D +G LNNLQDWELS KEKDK ++              S  +D  +L  N 
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMK--------------SQASDKEQLKTNE 48

Query: 184 RVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFK 363
           +  GR T   +    +T + RQ+D+L+ Y++ + L+S+  ++E + DA SEKELGNE+FK
Sbjct: 49  K--GRPTGKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFK 106

Query: 364 QKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSR 543
           QKKF EAIDCYSRSI LSPTAVA+ANRAMAY+K+K+FQEAE+DCTEALNLDDRYIKAYSR
Sbjct: 107 QKKFKEAIDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSR 166

Query: 544 RSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLEG 723
           R+TARKELGKLK+SI+D EFALRLEP N +IKKQHAE K+L EKEI++KASG L   ++ 
Sbjct: 167 RATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQE 226

Query: 724 AHK-GKVE 744
           A + GK E
Sbjct: 227 AQEVGKSE 234


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  283 bits (724), Expect = 5e-74
 Identities = 148/248 (59%), Positives = 184/248 (74%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4   SKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNNP 183
           SKHSRDQ  D +G LNNLQDWELS KEKDK +++    + +L N                
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEK-------------- 48

Query: 184 RVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFK 363
              GR T   +    +T + RQ+D+L+ Y++ + L+S+  ++E + DA SEKELGNE+FK
Sbjct: 49  ---GRPTGKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFK 105

Query: 364 QKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSR 543
           QKKF EAIDCYSRSI LSPTAVA+ANRAMAY+K+K+FQEAE+DCTEALNLDDRYIKAYSR
Sbjct: 106 QKKFKEAIDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSR 165

Query: 544 RSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLEG 723
           R+TARKELGKLK+SI+D EFALRLEP N +IKKQHAE K+L EKEI++KASG L   ++ 
Sbjct: 166 RATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQE 225

Query: 724 AHK-GKVE 744
           A + GK E
Sbjct: 226 AQEVGKSE 233


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508719763|gb|EOY11660.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  283 bits (724), Expect = 5e-74
 Identities = 148/248 (59%), Positives = 184/248 (74%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4   SKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNNP 183
           SKHSRDQ  D +G LNNLQDWELS KEKDK +++    + +L N                
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEK-------------- 48

Query: 184 RVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFK 363
              GR T   +    +T + RQ+D+L+ Y++ + L+S+  ++E + DA SEKELGNE+FK
Sbjct: 49  ---GRPTGKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFK 105

Query: 364 QKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSR 543
           QKKF EAIDCYSRSI LSPTAVA+ANRAMAY+K+K+FQEAE+DCTEALNLDDRYIKAYSR
Sbjct: 106 QKKFKEAIDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSR 165

Query: 544 RSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLEG 723
           R+TARKELGKLK+SI+D EFALRLEP N +IKKQHAE K+L EKEI++KASG L   ++ 
Sbjct: 166 RATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQE 225

Query: 724 AHK-GKVE 744
           A + GK E
Sbjct: 226 AQEVGKSE 233


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
           vinifera]
          Length = 474

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/245 (58%), Positives = 189/245 (77%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPS-QSSYNDSSRLPN 177
           PSKH+RDQ  D +G L +LQDWELS KEKDKK++A    +   D P+ + +   SS+L +
Sbjct: 6   PSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEK---DVPTARGNVKHSSKLSS 62

Query: 178 NPRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEF 357
           +P V  R  + ++ +       RQH++ + ++ +S+++S+  ++E + DA SEKELGNE+
Sbjct: 63  SPGVSLRLGQSRSDT-------RQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEY 115

Query: 358 FKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAY 537
           FKQ+KF EAIDCYSRSIAL PTAVAYANRAMAYIK+KRF+EAE+DC EALNLDDRYIKAY
Sbjct: 116 FKQRKFKEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAY 175

Query: 538 SRRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPL 717
           SRR+TARKELGK K++ +D EFALRLEPQN +IKKQ+AE K+L EKEI++KASGAL   +
Sbjct: 176 SRRATARKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSV 235

Query: 718 EGAHK 732
           +G  K
Sbjct: 236 QGLQK 240


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  281 bits (719), Expect = 2e-73
 Identities = 144/245 (58%), Positives = 189/245 (77%), Gaps = 1/245 (0%)
 Frame = +1

Query: 1    PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPS-QSSYNDSSRLPN 177
            PSKH+RDQ  D +G L +LQDWELS KEKDKK++A    +   D P+ + +   SS+L +
Sbjct: 629  PSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEK---DVPTARGNVKHSSKLSS 685

Query: 178  NPRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEF 357
            +P V  R  + ++ +       RQH++ + ++ +S+++S+  ++E + DA SEKELGNE+
Sbjct: 686  SPGVSLRLGQSRSDT-------RQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEY 738

Query: 358  FKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAY 537
            FKQ+KF EAIDCYSRSIAL PTAVAYANRAMAYIK+KRF+EAE+DC EALNLDDRYIKAY
Sbjct: 739  FKQRKFKEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAY 798

Query: 538  SRRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPL 717
            SRR+TARKELGK K++ +D EFALRLEPQN +IKKQ+AE K+L EKEI++KASGAL   +
Sbjct: 799  SRRATARKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSV 858

Query: 718  EGAHK 732
            +G  K
Sbjct: 859  QGLQK 863


>ref|XP_006339934.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
           [Solanum tuberosum]
          Length = 461

 Score =  276 bits (705), Expect = 7e-72
 Identities = 147/244 (60%), Positives = 182/244 (74%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKHSRDQ +D++GLLNNLQDWELS K KDKK+++   G+  L    +  ++ +S L  +
Sbjct: 5   PSKHSRDQFQDMQGLLNNLQDWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTS 60

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P+V+G +    TS     +    +++ K Y  +S L+S + S+E  ++ANSEKEL     
Sbjct: 61  PQVNGTRVGKSTSIR---SAAGPYNYSKNYNPISHLSSELISEESNINANSEKEL----- 112

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
             KKFNEAIDCYSRSIALSPTAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYS
Sbjct: 113 --KKFNEAIDCYSRSIALSPTAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYS 170

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLE 720
           RRST+RKELGKLK+SI+D EFALRLEPQN +IKKQ+ E KAL EKEI K+ SGA     +
Sbjct: 171 RRSTSRKELGKLKESIEDAEFALRLEPQNPEIKKQYGEVKALYEKEIRKRVSGATDVSAQ 230

Query: 721 GAHK 732
            A K
Sbjct: 231 RAQK 234


>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score =  275 bits (702), Expect = 2e-71
 Identities = 145/248 (58%), Positives = 180/248 (72%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKH RDQ  D +G L++LQDWELS K+KDKK+R                       P  
Sbjct: 5   PSKHGRDQALDFQGFLSDLQDWELSLKDKDKKMR-----------------------PQQ 41

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P  +  K+RD  +S+Y+TN          YE ++ ++S+ +S++G+ DA SEK+LGNE+F
Sbjct: 42  PNKEAPKSRDFGTSSYSTN----------YEPMNTVSSSFTSEDGLPDAASEKDLGNEYF 91

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKF EAIDCYSRSIAL+PTAVA+ANRAM+YIK+KRFQEAENDCTEALNLDDRYIKAYS
Sbjct: 92  KQKKFKEAIDCYSRSIALTPTAVAFANRAMSYIKIKRFQEAENDCTEALNLDDRYIKAYS 151

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPLE 720
           RR+TARKELGKLK+SI+D EFALRLEP N +IKKQ+AE K+L EK I++K SGA+   + 
Sbjct: 152 RRATARKELGKLKESIEDAEFALRLEPHNQEIKKQYAEAKSLYEKGILQKVSGAI--KIS 209

Query: 721 GAHKGKVE 744
              K KVE
Sbjct: 210 EQDKQKVE 217


>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
           gi|550337753|gb|ERP60190.1| hypothetical protein
           POPTR_0005s01710g [Populus trichocarpa]
          Length = 402

 Score =  265 bits (678), Expect = 1e-68
 Identities = 140/246 (56%), Positives = 184/246 (74%), Gaps = 1/246 (0%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           P KH RDQ  D +G LN+LQDWEL  K+ DKK++             + S     ++  +
Sbjct: 5   PGKHGRDQALDFQGFLNDLQDWEL-LKDTDKKMK-------------KKSRASDVKIGED 50

Query: 181 PRVDGRKTRDKTSSAYNTNTVR-QHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEF 357
            R +G     KTS+A ++ +   Q+++ + +  +++L+S+ ++ E  VDA +EKELGNE+
Sbjct: 51  GRSEG-----KTSAADSSRSGSGQYEYSRNFGAINRLSSSFTTDEITVDATTEKELGNEY 105

Query: 358 FKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAY 537
           FKQKKFNEAI+CYSRSIALSPTAVAYANRAMAY+K+KRF+EAE+DCTEALNLDDRYIKAY
Sbjct: 106 FKQKKFNEAIECYSRSIALSPTAVAYANRAMAYLKIKRFREAEDDCTEALNLDDRYIKAY 165

Query: 538 SRRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGALAGPL 717
           SRR+TARKELGKLK+SI+D EFAL+LEP N +IKKQ+AE K+L EKEI++KASG L   L
Sbjct: 166 SRRATARKELGKLKESIEDSEFALKLEPNNQEIKKQYAEVKSLYEKEILQKASGTLRSSL 225

Query: 718 EGAHKG 735
           +G  +G
Sbjct: 226 QGTQQG 231


>ref|XP_006392426.1| hypothetical protein EUTSA_v10023436mg [Eutrema salsugineum]
           gi|557088932|gb|ESQ29712.1| hypothetical protein
           EUTSA_v10023436mg [Eutrema salsugineum]
          Length = 473

 Score =  261 bits (666), Expect = 2e-67
 Identities = 134/235 (57%), Positives = 172/235 (73%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKH RDQ +D +G LN+LQDWELS K+KDKK++ +      L NP              
Sbjct: 5   PSKHGRDQTQDFQGFLNDLQDWELSLKDKDKKIKQN------LSNP-------------- 44

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
                      TS  +  +   Q+D +KKY  +S L+S+ +  E  +DANSEKE GNE+F
Sbjct: 45  -----------TSEKFRPSGSGQYDFVKKYGPMSGLSSSFADDESPLDANSEKEQGNEYF 93

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSP AVA+ANRAMAY+K+KR++EAE DCTEALNLDDRY KAYS
Sbjct: 94  KQKKFNEAIDCYSRSIALSPNAVAFANRAMAYLKIKRYREAEIDCTEALNLDDRYTKAYS 153

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGAL 705
           RR+TARK LG +K++++D EFALRLEPQ+ +++KQ+A+ K+LLEKEI++KASGA+
Sbjct: 154 RRATARKALGMVKEAMEDAEFALRLEPQSQELQKQYADIKSLLEKEIIEKASGAM 208


>ref|XP_004144746.1| PREDICTED: RNA polymerase II-associated protein 3-like [Cucumis
           sativus] gi|449517788|ref|XP_004165926.1| PREDICTED: RNA
           polymerase II-associated protein 3-like [Cucumis
           sativus]
          Length = 458

 Score =  259 bits (663), Expect = 5e-67
 Identities = 133/233 (57%), Positives = 170/233 (72%)
 Frame = +1

Query: 4   SKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNNP 183
           +KH RDQL D +G LN+LQDWE+SFK KDKKL+   +G+ K D                 
Sbjct: 6   AKHGRDQLLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKED----------------- 48

Query: 184 RVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFK 363
               R+  +K S+A         D++K+Y+ +++L+    ++   VDA SEKE GNE+FK
Sbjct: 49  ----RRQTEKASAA---------DYMKQYDAVNRLSRNFQTEGSFVDAASEKEQGNEYFK 95

Query: 364 QKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSR 543
           QKKF EAIDCYSRSIALSPTAVA+ANRAMAY+K++RFQEAE+DCTEALNLDDRYIKAYSR
Sbjct: 96  QKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSR 155

Query: 544 RSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGA 702
           R+TARKELGK K++++D EFA RLEP N +IKKQHA+ +A + K I++KASGA
Sbjct: 156 RATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGA 208


>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
           sinensis]
          Length = 438

 Score =  256 bits (654), Expect = 6e-66
 Identities = 136/234 (58%), Positives = 168/234 (71%)
 Frame = +1

Query: 4   SKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNNP 183
           +KH+RDQ  D +G LN+LQDW+LS  EKDKK++     +  L + S  S           
Sbjct: 2   AKHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKS----------- 50

Query: 184 RVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFK 363
                K    + ++Y+ N          Y+ +S ++S++ ++E   DA SEKELGNE FK
Sbjct: 51  ----AKKPSPSGNSYSRN----------YDPVSHISSSLMNEESTPDATSEKELGNECFK 96

Query: 364 QKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSR 543
           QKKF EAIDCYSRSIALSPTAVAYANRAMAY+K++RFQEAE+DCTEALNLDDRYIKAYSR
Sbjct: 97  QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 156

Query: 544 RSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGAL 705
           R+TARKELGKLK+SI+D EFALRLEPQN +IKKQ AE K+L EKE+ +KAS  L
Sbjct: 157 RATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQKASKTL 210


>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
            gi|557535662|gb|ESR46780.1| hypothetical protein
            CICLE_v10003914mg [Citrus clementina]
          Length = 977

 Score =  254 bits (649), Expect = 2e-65
 Identities = 137/232 (59%), Positives = 170/232 (73%)
 Frame = +1

Query: 10   HSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNNPRV 189
            H+RDQ  D +G LN+LQDW+LS  EKDKK++     +   DN   SS             
Sbjct: 543  HNRDQALDFQGFLNDLQDWDLSLHEKDKKMKHKASSK---DNLVSSSL------------ 587

Query: 190  DGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQK 369
               K+ +K S + N+       + + Y+ +S+++S++ ++E   DA SEKELGNE FKQK
Sbjct: 588  ---KSGEKPSPSGNS-------YSRNYDPVSRISSSLMNEESTPDATSEKELGNECFKQK 637

Query: 370  KFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRS 549
            KF EAIDCYSRSIALSPTAVAYANRAMAY+K++RFQEAE+DCTEALNLDDRYIKAYSRR+
Sbjct: 638  KFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRA 697

Query: 550  TARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGAL 705
            TARKELGKLK+SI+D EFALRLEPQN +IKKQ AE K+L EKE+ +KAS  L
Sbjct: 698  TARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQKASKTL 749


>ref|NP_176039.2| carboxylate clamp-tetratricopeptide repeat protein [Arabidopsis
           thaliana] gi|53828529|gb|AAU94374.1| At1g56440
           [Arabidopsis thaliana] gi|59958350|gb|AAX12885.1|
           At1g56440 [Arabidopsis thaliana]
           gi|110743110|dbj|BAE99447.1| hypothetical protein
           [Arabidopsis thaliana] gi|332195274|gb|AEE33395.1|
           carboxylate clamp-tetratricopeptide repeat [Arabidopsis
           thaliana]
          Length = 476

 Score =  254 bits (648), Expect = 3e-65
 Identities = 132/235 (56%), Positives = 172/235 (73%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKH RDQ +D +G  N+LQDWELS K+KDKK++           P+ SS         N
Sbjct: 5   PSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIK---------QQPANSS---------N 46

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P          +S  +  +   ++D  KKY  +  L+S++   E ++D++SEKE GNEFF
Sbjct: 47  P----------SSETFRPSGSGKYDFAKKYRSIRDLSSSLIG-ESLLDSSSEKEQGNEFF 95

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSP AV YANRAMAY+K+KR++EAE DCTEALNLDDRYIKAYS
Sbjct: 96  KQKKFNEAIDCYSRSIALSPNAVTYANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYS 155

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGAL 705
           RR+TARKELG +K++ +D EFALRLEP++ ++KKQ+A+ K+LLEKEI++KA+GA+
Sbjct: 156 RRATARKELGMIKEAKEDAEFALRLEPESQELKKQYADIKSLLEKEIIEKATGAM 210


>ref|NP_001185250.1| carboxylate clamp-tetratricopeptide repeat protein [Arabidopsis
           thaliana] gi|332195275|gb|AEE33396.1| carboxylate
           clamp-tetratricopeptide repeat [Arabidopsis thaliana]
          Length = 494

 Score =  254 bits (648), Expect = 3e-65
 Identities = 132/235 (56%), Positives = 172/235 (73%)
 Frame = +1

Query: 1   PSKHSRDQLRDVEGLLNNLQDWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLPNN 180
           PSKH RDQ +D +G  N+LQDWELS K+KDKK++           P+ SS         N
Sbjct: 5   PSKHGRDQTQDFQGFFNDLQDWELSLKDKDKKIK---------QQPANSS---------N 46

Query: 181 PRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFF 360
           P          +S  +  +   ++D  KKY  +  L+S++   E ++D++SEKE GNEFF
Sbjct: 47  P----------SSETFRPSGSGKYDFAKKYRSIRDLSSSLIG-ESLLDSSSEKEQGNEFF 95

Query: 361 KQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYS 540
           KQKKFNEAIDCYSRSIALSP AV YANRAMAY+K+KR++EAE DCTEALNLDDRYIKAYS
Sbjct: 96  KQKKFNEAIDCYSRSIALSPNAVTYANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYS 155

Query: 541 RRSTARKELGKLKQSIDDVEFALRLEPQNHDIKKQHAECKALLEKEIMKKASGAL 705
           RR+TARKELG +K++ +D EFALRLEP++ ++KKQ+A+ K+LLEKEI++KA+GA+
Sbjct: 156 RRATARKELGMIKEAKEDAEFALRLEPESQELKKQYADIKSLLEKEIIEKATGAM 210