BLASTX nr result
ID: Mentha26_contig00042524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00042524
(370 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 60 3e-07
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 58 1e-06
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 58 1e-06
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 58 1e-06
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 58 1e-06
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 57 2e-06
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 57 3e-06
gb|ABA97403.1| retrotransposon protein, putative, unclassified [... 56 5e-06
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group] 55 8e-06
>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 592
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 88 GLLQPLPIPHTAWTHISLDFIEGLPKSV-RELPEVDADGLFKVEPFVVLNDRLTHRNGVE 264
GLLQP+PIP AWTHIS+DFIEGLPKS +E+ V D K F+ L+ T ++ V+
Sbjct: 361 GLLQPIPIPEMAWTHISMDFIEGLPKSEDKEVILVVVDRFTKYSHFIALSHPFTVQHVVK 420
Query: 265 V 267
V
Sbjct: 421 V 421
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +1
Query: 178 LPEVDADGLFKVEPFVVLNDRLTHRNGVEVSQILVQWLPSFPDLATWEDVKFIRKKFRSF 357
LP V DG K EP VL R+ RN V V+Q L+ W P ATWED +I+K F +F
Sbjct: 894 LPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNF 953
Query: 358 DP 363
P
Sbjct: 954 QP 955
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 85 AGLLQPLPIPHTAWTHISLDFIEGLPKSV-RELPEVDADGLFKVEPFVVLNDRLTHRNGV 261
AGLLQPLP+P AW+HI++DF+EGLPKS +++ V D K F+ L+ T
Sbjct: 505 AGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFT----- 559
Query: 262 EVSQILVQWLPSF 300
QIL Q+L F
Sbjct: 560 -ADQILTQFLEHF 571
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 85 AGLLQPLPIPHTAWTHISLDFIEGLPKSV-RELPEVDADGLFKVEPFVVLNDRLTHRNGV 261
AGLLQPLP+P AW+HI++DF+EGLPKS +++ V D K F+ L+ T
Sbjct: 284 AGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFT----- 338
Query: 262 EVSQILVQWLPSF 300
QIL Q+L F
Sbjct: 339 -ADQILTQFLEHF 350
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/62 (48%), Positives = 34/62 (54%)
Frame = +1
Query: 178 LPEVDADGLFKVEPFVVLNDRLTHRNGVEVSQILVQWLPSFPDLATWEDVKFIRKKFRSF 357
LP V DG K EP VL R+ R GV V+Q LV W P ATWED I+ F SF
Sbjct: 1525 LPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSF 1584
Query: 358 DP 363
+P
Sbjct: 1585 NP 1586
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Frame = +1
Query: 178 LPEVDADGLFKVEPFVVLNDRLTHRNGVEVSQILVQWLPSFPDLATWEDVKFIRKKFRSF 357
LP V DG K EP VL R+ R GV V+Q L+ W P ATWED I+ F SF
Sbjct: 1414 LPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMFPSF 1473
Query: 358 DP 363
+P
Sbjct: 1474 NP 1475
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 88 GLLQPLPIPHTAWTHISLDFIEGLPKS-VRELPEVDADGLFKVEPFVVLNDRLTHRNGVE 264
GLL PLPIP AWTHIS+DFIEGLPKS +++ V D K FV L+ T
Sbjct: 951 GLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVALSHPFT------ 1004
Query: 265 VSQILVQWLPSF 300
QI+ Q++ ++
Sbjct: 1005 ADQIVTQFVENY 1016
>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 562
Score = 56.2 bits (134), Expect = 5e-06
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 88 GLLQPLPIPHTAWTHISLDFIEGLPKS-VRELPEVDADGLFKVEPFVVLNDRLTHRNGVE 264
GLL PLP+P AWTHIS+DFIEGLPKS +++ V D K FV L+ T
Sbjct: 364 GLLHPLPVPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVALSHPFT------ 417
Query: 265 VSQILVQWLPSF 300
QI+ Q++ ++
Sbjct: 418 ADQIVTQFVENY 429
>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
Length = 394
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/62 (45%), Positives = 35/62 (56%)
Frame = +1
Query: 178 LPEVDADGLFKVEPFVVLNDRLTHRNGVEVSQILVQWLPSFPDLATWEDVKFIRKKFRSF 357
LP V +G K +P VL R+ RNGV V+Q L+ W P ATWED IR F +F
Sbjct: 333 LPSVGPEGQIKTQPTAVLQRRMMPRNGVAVTQWLILWENLGPTDATWEDADVIRNMFPTF 392
Query: 358 DP 363
+P
Sbjct: 393 NP 394