BLASTX nr result

ID: Mentha26_contig00042231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00042231
         (307 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006297288.1| hypothetical protein CARUB_v10013303mg [Caps...    57   2e-06

>ref|XP_006297288.1| hypothetical protein CARUB_v10013303mg [Capsella rubella]
           gi|482565997|gb|EOA30186.1| hypothetical protein
           CARUB_v10013303mg [Capsella rubella]
          Length = 587

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 20/88 (22%)
 Frame = +1

Query: 97  WRCDLCKVKVTSEITLIAHRLGKKHKSNANR-------------------IKIKDGVPW- 216
           W C LC +  TS+ TL++H  GKKH++N  +                   + + +  PW 
Sbjct: 147 WFCSLCNINATSQHTLLSHANGKKHRANVKQFDAEKQQRESEQQTEVDINVGLSNCYPWF 206

Query: 217 CTICDAKLSNLAIAASHFKGKRHSANIE 300
           C++C+AK ++     SH  GK+H  N+E
Sbjct: 207 CSLCNAKATSQQTLLSHANGKKHRVNVE 234


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