BLASTX nr result

ID: Mentha26_contig00042205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00042205
         (577 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193654.2| zinc knuckle (CCHC-type) family protein [Arabid...    59   1e-06
emb|CAA16708.1| putatative protein [Arabidopsis thaliana] gi|726...    59   1e-06
ref|XP_006413997.1| hypothetical protein EUTSA_v10024821mg [Eutr...    58   2e-06

>ref|NP_193654.2| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
           gi|75248513|sp|Q8VZ67.1|Y4919_ARATH RecName:
           Full=Uncharacterized zinc finger CCHC domain-containing
           protein At4g19190 gi|17528964|gb|AAL38692.1| putative
           putatative protein [Arabidopsis thaliana]
           gi|22136744|gb|AAM91691.1| putative putatative protein
           [Arabidopsis thaliana] gi|332658757|gb|AEE84157.1| zinc
           knuckle (CCHC-type) family protein [Arabidopsis
           thaliana]
          Length = 595

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 53/180 (29%)
 Frame = +2

Query: 56  DELEMMHDTSFLHEKPPRNCAESAKGAERKKEKQSCGGGSSSM------NISRKAD---- 205
           +++E M   SF++ +PP    ESAK AE K EK   G GSS+       N+  + +    
Sbjct: 99  EKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHK-GQGSSTQDPVADDNVGSRPEESQG 157

Query: 206 NGQFTGENMKPVQKDAIG----GEQQLEGLDNAPRLDAGVSGGAK--------------- 328
            G+ T E  KP  KD  G     E++ E L NAPR++ G+ G  K               
Sbjct: 158 GGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCG 217

Query: 329 ----SSANR----KDAIDQDQ----------------IGSSERLKGEQKQKPRTSPHRDG 436
                S +R    KDA+  ++                   SE LK E KQKP  SP R G
Sbjct: 218 NFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGG 277


>emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
           gi|7268714|emb|CAB78921.1| putatative protein
           [Arabidopsis thaliana]
          Length = 1260

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 53/180 (29%)
 Frame = +2

Query: 56  DELEMMHDTSFLHEKPPRNCAESAKGAERKKEKQSCGGGSSSM------NISRKAD---- 205
           +++E M   SF++ +PP    ESAK AE K EK   G GSS+       N+  + +    
Sbjct: 112 EKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHK-GQGSSTQDPVADDNVGSRPEESQG 170

Query: 206 NGQFTGENMKPVQKDAIG----GEQQLEGLDNAPRLDAGVSGGAK--------------- 328
            G+ T E  KP  KD  G     E++ E L NAPR++ G+ G  K               
Sbjct: 171 GGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCG 230

Query: 329 ----SSANR----KDAIDQDQ----------------IGSSERLKGEQKQKPRTSPHRDG 436
                S +R    KDA+  ++                   SE LK E KQKP  SP R G
Sbjct: 231 NFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGG 290


>ref|XP_006413997.1| hypothetical protein EUTSA_v10024821mg [Eutrema salsugineum]
           gi|557115167|gb|ESQ55450.1| hypothetical protein
           EUTSA_v10024821mg [Eutrema salsugineum]
          Length = 556

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 59/181 (32%), Positives = 79/181 (43%), Gaps = 54/181 (29%)
 Frame = +2

Query: 56  DELEMMHDTSFLHEKPPRNCAESAKGAERKKEKQSCGGGSSSMNI-------SRKADN-- 208
           +++EMM   SF++ +PP    ESAK AE   EK   G GSS+ N        S+ A++  
Sbjct: 98  EKIEMMKAVSFMYIRPPGYDPESAKAAEYADEKHE-GQGSSTQNPVADDNVGSKPAESVA 156

Query: 209 -GQFTG-ENMKPVQKDAIG----GEQQLEGLDNAPRLDAGVSGGAK-------------- 328
            G  +G E  KP  KD  G     E+Q E L NAP+L+ G++G AK              
Sbjct: 157 GGDHSGQERKKPRPKDVFGRALPTEEQFEVLKNAPKLETGIAGRAKPFAVELRNVKCLRC 216

Query: 329 -----SSANR----KDAIDQDQ----------------IGSSERLKGEQKQKPRTSPHRD 433
                 S +R    KDA+  ++                    E LK E KQKP  SP R 
Sbjct: 217 GNFGHQSGDRDCPLKDAVMPNEEQRLKRDDPLTAIIAHTDPGEPLKWELKQKPGLSPPRG 276

Query: 434 G 436
           G
Sbjct: 277 G 277


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