BLASTX nr result
ID: Mentha26_contig00041805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00041805
(972 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 210 6e-52
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 192 2e-46
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 190 9e-46
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 189 1e-45
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 189 1e-45
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 189 2e-45
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera] 187 4e-45
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 186 9e-45
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 186 1e-44
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 185 3e-44
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 185 3e-44
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 184 5e-44
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 183 1e-43
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 183 1e-43
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 183 1e-43
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 182 2e-43
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 181 4e-43
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 181 4e-43
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 180 9e-43
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 180 9e-43
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 210 bits (535), Expect = 6e-52
Identities = 91/164 (55%), Positives = 124/164 (75%)
Frame = -1
Query: 966 SFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 787
S+L GI F+H CP+IH QNG+ ERKH+HI DIGLTLLAQA++P FWW+AF TAV+LI
Sbjct: 59 SYLTQFGIQFRHPCPHIHHQNGRIERKHRHIVDIGLTLLAQANLPLKFWWNAFHTAVFLI 118
Query: 786 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 607
NRLP+ L +P+ L++ P+Y L+ FGC C+P+L+PYN+HKL F+S++CVF+GYS
Sbjct: 119 NRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIGYSS 178
Query: 606 NHKGYKCLHPSGRIYISDTVHFNEIEFPYPALFDSKFTSSSTAP 475
+HKGY+CLH SGR+Y+S+ V F+E FPY + D + S +P
Sbjct: 179 SHKGYQCLHSSGRVYVSNHVIFDEQSFPYVSGSDFSSIAQSCSP 222
Score = 87.8 bits (216), Expect = 6e-15
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -1
Query: 243 HHMVTRSKHGIFKPKQVFAVSV-LPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSLV 67
H M+TRSK GIFKPK A + +P PT S AL+DP W +AM+ EF AL +N TW LV
Sbjct: 297 HPMITRSKAGIFKPKSFLAALLAIPSEPTSVSAALSDPKWFKAMQEEFQALQNNHTWDLV 356
Query: 66 PYSPDMKVISNKWIYKVKTKAD 1
S +KV+ NKWI+K+K AD
Sbjct: 357 LPSEPIKVVGNKWIFKIKYHAD 378
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 192 bits (487), Expect = 2e-46
Identities = 91/173 (52%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Frame = -1
Query: 969 VSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYL 790
+SFL + GI + SCPY SQNG+ ERKH+H+ + GL LLA A +P FW AFQTA +L
Sbjct: 569 MSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFL 628
Query: 789 INRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYS 610
INR+PS VLQ +P++ L+K P+YK L+ FGC CYPF++PYN HKLQ++S KCVFLGYS
Sbjct: 629 INRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYS 688
Query: 609 PNHKGYKCL-HPSGRIYISDTVHFNEIEFPYPALFDSKFTSSSTAPEVTVPII 454
+HKGY CL + +GR+Y+S V F+E +FP+ S S + E +P I
Sbjct: 689 LHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSS-PSKDASDESVIPAI 740
Score = 68.9 bits (167), Expect = 3e-09
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = -1
Query: 237 MVTRSKHGIFKPKQVFAVSVLP-QAPTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPY 61
+ TRS GI K K +F ++ PT +A+ DP W EAM+ E +AL N+TW LV
Sbjct: 806 VTTRSMSGITKRKHIFNLAAFKISEPTTLKQAIKDPNWAEAMQTEIAALHKNQTWDLVDP 865
Query: 60 SPDMKVISNKWIYKVKTKAD 1
D+ +I KW+YK+K K D
Sbjct: 866 PKDVNIIGCKWVYKLKYKPD 885
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 190 bits (482), Expect = 9e-46
Identities = 90/166 (54%), Positives = 116/166 (69%)
Frame = -1
Query: 963 FLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLIN 784
+L GI + SCPY H QNG AERKH+HI + G+ LLAQAS+P+ +W +AF+T+VYLIN
Sbjct: 643 YLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLIN 702
Query: 783 RLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSPN 604
RLP+ VL+ ++P +L+ P+Y LK FGC CYP L+P+N HKLQF+S C FLGYS N
Sbjct: 703 RLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLN 762
Query: 603 HKGYKCLHPSGRIYISDTVHFNEIEFPYPALFDSKFTSSSTAPEVT 466
HKGYKCL P+G I IS V F+E FP+ L K +SS + T
Sbjct: 763 HKGYKCLSPNGNILISRDVIFDEXAFPFAQLQSQKQXTSSFSSSXT 808
Score = 79.0 bits (193), Expect = 3e-12
Identities = 41/88 (46%), Positives = 52/88 (59%)
Frame = -1
Query: 264 ATPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDN 85
+ P +HHM+TRSK GIFKPK ++ PT EAL W++AM E+ ALL N
Sbjct: 854 SAPPFPSHHMITRSKXGIFKPKAY----LISTTPTSVPEALQLSHWKQAMTDEYLALLRN 909
Query: 84 KTWSLVPYSPDMKVISNKWIYKVKTKAD 1
TW LVP D K+I KW++KVK D
Sbjct: 910 NTWDLVPPPTDRKLIGCKWVFKVKENXD 937
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 189 bits (480), Expect = 1e-45
Identities = 90/173 (52%), Positives = 120/173 (69%), Gaps = 1/173 (0%)
Frame = -1
Query: 969 VSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYL 790
+SFL + GI + SCPY SQNG+ ERKH+H+ + GL LLA A +P FW AFQTA +L
Sbjct: 619 MSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFL 678
Query: 789 INRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYS 610
INR+PS VL +P++ L+K P+YK L+ FGC CYPF++PYN HKLQ++S KCVFLGYS
Sbjct: 679 INRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYS 738
Query: 609 PNHKGYKCL-HPSGRIYISDTVHFNEIEFPYPALFDSKFTSSSTAPEVTVPII 454
+HKGY CL + +GR+Y+S V F+E +FP+ S S + E +P I
Sbjct: 739 LHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQNISSS-PSKDASDESIIPXI 790
Score = 67.4 bits (163), Expect = 8e-09
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -1
Query: 237 MVTRSKHGIFKPKQVFAVSVLP-QAPTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPY 61
+ TRS GI K K +F ++ PT +A+ DP W EAM E +AL N+TW LV
Sbjct: 856 VTTRSMSGITKRKPIFNLAASKISEPTTLKQAIKDPNWAEAMHTEIAALHKNQTWDLVDP 915
Query: 60 SPDMKVISNKWIYKVKTKAD 1
D+ +I KW+YK+K K D
Sbjct: 916 PKDVNIIGCKWVYKLKYKXD 935
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 189 bits (480), Expect = 1e-45
Identities = 89/175 (50%), Positives = 119/175 (68%), Gaps = 2/175 (1%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L ++ GI + SCP+ QNG ERKH+HI ++GLTLLAQAS+P +W DAF TAV+
Sbjct: 452 LKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVF 511
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINRLP+ VL+ + P+ L+ + PNY QLK FGC C+P L+PYN+HKL F+SS C FLGY
Sbjct: 512 LINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGY 571
Query: 612 SPNHKGYKCLHPSGRIYISDTVHFNEIEFPYPALFDS--KFTSSSTAPEVTVPII 454
S HKGYKCL+ GR++IS +V F+E FP+ + S ST +P++
Sbjct: 572 SSKHKGYKCLNQQGRMFISRSVVFDETRFPFADRLQKPVQIVSHSTVGLPCIPLV 626
Score = 82.0 bits (201), Expect = 3e-13
Identities = 40/87 (45%), Positives = 54/87 (62%)
Frame = -1
Query: 261 TPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNK 82
T Q HHMVTRSK+GIFKP V+ V + + P EA++ P W+EAM EF AL+ NK
Sbjct: 716 TXPQQPHHMVTRSKNGIFKPX-VYTVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNK 774
Query: 81 TWSLVPYSPDMKVISNKWIYKVKTKAD 1
TWSLV + + +W++K+K D
Sbjct: 775 TWSLVSLPTNRTSVGCRWVFKLKRNPD 801
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 189 bits (479), Expect = 2e-45
Identities = 90/155 (58%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L SF GI SCP+ H QNG AERKH+HI ++GLTLLA +SMP FW +AFQ AVY
Sbjct: 591 LHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVY 650
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINR P+ +LQF TP L+ P+Y L+ FGC C+P L+PYN HKLQF+S +C FLGY
Sbjct: 651 LINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGY 710
Query: 612 SPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 511
S HKG+KCL PS GR+YIS V F+E FP+ L
Sbjct: 711 STLHKGFKCLDPSTGRVYISRDVIFDETNFPFAKL 745
Score = 57.8 bits (138), Expect = 7e-06
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -1
Query: 165 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
P ++AL + W++AM E+ AL++NKTW LVP VI KW+YK+K K D
Sbjct: 939 PKNLTDALQNTNWKKAMDIEYEALMNNKTWHLVPPKQGRNVIDCKWVYKIKRKQD 993
>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
Length = 1242
Score = 187 bits (476), Expect = 4e-45
Identities = 84/151 (55%), Positives = 111/151 (73%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L ++ GI + SCP+ QNG ERKH+HI ++GLTLLAQAS+P +W DAF T V+
Sbjct: 698 LKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTXVF 757
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINRLP+ VL+ + P+ L+ + PNY QLK FGC C+P L+PYN+HKL F+SS C FLGY
Sbjct: 758 LINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGY 817
Query: 612 SPNHKGYKCLHPSGRIYISDTVHFNEIEFPY 520
S HKGYKCL+ GR++IS +V F+E +FP+
Sbjct: 818 SSKHKGYKCLNQQGRMFISRSVXFDETKFPF 848
Score = 79.3 bits (194), Expect = 2e-12
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = -1
Query: 252 QNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWS 73
Q HHMVTRSK+GIFKPK V+ + + P EA++ P W+EAM EF AL+ NKTWS
Sbjct: 965 QQPHHMVTRSKNGIFKPK-VYTFDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWS 1023
Query: 72 LVPYSPDMKVISNKWIYKVKTKAD 1
V + + +W++K+K D
Sbjct: 1024 FVSLLTNRTYVGCRWVFKLKMYPD 1047
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 186 bits (473), Expect = 9e-45
Identities = 88/170 (51%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Frame = -1
Query: 966 SFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 787
S+L GI Q SCPY QNG+AERK +HI + GL LLA AS+P+ FW AF TA++LI
Sbjct: 656 SYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLI 715
Query: 786 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 607
NRLP+ VL +Q+PF +L+ PNY K FGC CYP+++PYN++KL ++SS+CVFLGYS
Sbjct: 716 NRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSS 775
Query: 606 NHKGYKCLHP-SGRIYISDTVHFNEIEFPYPALFDSKFTSSSTAPEVTVP 460
NHKGY CL+P +GR+Y++ V F+E FP+ + T ++ VT+P
Sbjct: 776 NHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS------TPDQSSSVVTIP 819
Score = 72.0 bits (175), Expect = 3e-10
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = -1
Query: 249 NTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSL 70
N H MVTR+K+GI K K F+ + PT ++A+ D W AM EFSAL N TW L
Sbjct: 877 NQHPMVTRAKNGISKKKVYFSSHI--SEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHL 934
Query: 69 VPYSPDMKVISNKWIYKVKTKAD 1
VP + +I KW+YK+K K D
Sbjct: 935 VPPPSNGNIIGCKWVYKLKYKPD 957
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 186 bits (472), Expect = 1e-44
Identities = 90/171 (52%), Positives = 115/171 (67%), Gaps = 3/171 (1%)
Frame = -1
Query: 966 SFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 787
S+L GI + SCP QNG AERKH+HI D GLTLLA A MP ++W D+F TAVY+I
Sbjct: 537 SYLSTNGIFQRFSCPKHPEQNGLAERKHRHIVDTGLTLLAHAHMPSTYWVDSFNTAVYII 596
Query: 786 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 607
NRLPS VL + +P+ L+ P Y LK FGC C+P+L+PYN KLQ +S +CVFLGYS
Sbjct: 597 NRLPSRVLNYASPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSL 656
Query: 606 NHKGYKCLHP-SGRIYISDTVHFNEIEFPY--PALFDSKFTSSSTAPEVTV 463
NH+GY+C P SGR+Y+S V F+E FP+ PAL + SST + +
Sbjct: 657 NHQGYRCFDPSSGRVYLSRHVLFDESSFPFTEPALTSNSSIDSSTDQSILI 707
Score = 77.0 bits (188), Expect = 1e-11
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Frame = -1
Query: 267 VATPVQNTHHMVTRSKHGIFKPKQVFAVS----VLPQAPTRDSEALADPGWQEAMRAEFS 100
+ + VQN +VTRSKHGI KP +A+ LP PT ++A P W+EAM EF
Sbjct: 836 LVSQVQNHGDIVTRSKHGISKPNPKYAMHSTLLALPLEPTCYTQAAKYPEWREAMDHEFK 895
Query: 99 ALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
AL TW LVP S M ++ NKW++++K ++D
Sbjct: 896 ALQQAGTWFLVPPSSLMNILPNKWVFRIKKRSD 928
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 185 bits (469), Expect = 3e-44
Identities = 87/170 (51%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Frame = -1
Query: 966 SFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 787
S+L GI Q SCPY QNG+AERK +HI + GL LLA AS+P+ FW AF T ++LI
Sbjct: 465 SYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFLI 524
Query: 786 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 607
NRLP+ VL +Q+PF +L+ PNY K FGC CYP+++PYN++KL ++SS+CVFLGYS
Sbjct: 525 NRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSS 584
Query: 606 NHKGYKCLHP-SGRIYISDTVHFNEIEFPYPALFDSKFTSSSTAPEVTVP 460
NHKGY CL+P +GR+Y++ V F+E FP+ + T ++ VT+P
Sbjct: 585 NHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS------TPDQSSSVVTIP 628
Score = 72.0 bits (175), Expect = 3e-10
Identities = 38/83 (45%), Positives = 49/83 (59%)
Frame = -1
Query: 249 NTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLDNKTWSL 70
N H MVTR+K+GI K K F+ + PT ++A+ D W AM EFSAL N TW L
Sbjct: 686 NQHPMVTRAKNGISKKKVYFSSHI--SEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHL 743
Query: 69 VPYSPDMKVISNKWIYKVKTKAD 1
VP + +I KW+YK+K K D
Sbjct: 744 VPPPSNGNIIGCKWVYKLKYKPD 766
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 185 bits (469), Expect = 3e-44
Identities = 87/155 (56%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L +F ++ GI SCP+ H QNG ERKH+HI ++GL+LLA ASMP FW +AF A Y
Sbjct: 578 LHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATY 637
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINRLPS V++F TP L+K P+YK L+ FGC C+P L+PYN HKLQF+S +CVFLG+
Sbjct: 638 LINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGF 697
Query: 612 SPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 511
S HKG+KCL S GR+Y+S V F+E FP+ L
Sbjct: 698 SNIHKGFKCLDVSTGRVYVSRDVTFDEQVFPFANL 732
Score = 64.3 bits (155), Expect = 7e-08
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = -1
Query: 150 EALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
EAL D W+EAM +E+ AL+ NKTW LVP +I KW+YKVK KAD
Sbjct: 929 EALGDKNWKEAMDSEYQALMKNKTWHLVPSKKGQNIIDCKWVYKVKRKAD 978
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 184 bits (467), Expect = 5e-44
Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L SF GI SCP+ H QNG AERKH+HI ++GL LLA +SMP FW +AF +AVY
Sbjct: 389 LNSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEMGLALLAYSSMPLKFWDEAFTSAVY 448
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINR PS +L++ TP L+K P+Y L+ FGC C+P L+PYN KLQF+S +C FLGY
Sbjct: 449 LINRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFLGY 508
Query: 612 SPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 511
SP HKG+KCL PS GR+YIS V F+E FP+ +L
Sbjct: 509 SPLHKGFKCLDPSTGRVYISHDVIFDENVFPFASL 543
Score = 62.4 bits (150), Expect = 3e-07
Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Frame = -1
Query: 252 QNTHHMV----TRSKHGIFKPKQVFAVSV--------LPQAPTRDSEALADPGWQEAMRA 109
Q HH++ TR + GI K K +V + P +AL D W++AM A
Sbjct: 698 QQQHHVISRPATRLQSGIRKEKVYTDGTVKYRTTFLTVTGEPENLDDALKDNNWKKAMDA 757
Query: 108 EFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
EF AL +NKTW LVP VI KW+YK+K K D
Sbjct: 758 EFMALQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQD 793
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 183 bits (464), Expect = 1e-43
Identities = 87/174 (50%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Frame = -1
Query: 966 SFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 787
SFL GI + SCPY QNG+ ERKH+H+ + GL LL+ AS+P +W AFQT +LI
Sbjct: 625 SFLQAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLI 684
Query: 786 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 607
NR+PS VL++ +P++ L++ P+YK + FGC CYPF++PYN HKLQ++S +C+FLGYS
Sbjct: 685 NRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSL 744
Query: 606 NHKGYKCL-HPSGRIYISDTVHFNEIEFPYPALFDSKFTSSS--TAPEVTVPII 454
NHKG+ CL + +GR+YI+ V F+E FP L SK +SSS T+ E + P +
Sbjct: 745 NHKGFLCLDYATGRVYITPHVVFDESTFP---LAQSKSSSSSNDTSAEGSTPAL 795
Score = 67.0 bits (162), Expect = 1e-08
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -1
Query: 237 MVTRSKHGIFKPKQVFAVSVLPQA-PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPY 61
M TRS GI K K + +S + + P+ +A DP W +AM E +AL N TW LV
Sbjct: 863 MTTRSMRGITKKKTILDLSAIKVSEPSTLKQAFKDPNWTKAMEMEIAALHRNHTWDLVEQ 922
Query: 60 SPDMKVISNKWIYKVKTKAD 1
P++ VI KW+YK+K K D
Sbjct: 923 PPNVNVIGCKWVYKLKHKPD 942
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 183 bits (464), Expect = 1e-43
Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L SF GI Q SCP+ H QNG ERKH+HI +IGL+LLA ASMP FW +AF A Y
Sbjct: 468 LNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATY 527
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINRLP V+ F TP L+ P+YK L+ FGC C+P L+PYN HKLQF+S +CVFLG+
Sbjct: 528 LINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGF 587
Query: 612 SPNHKGYKCLH-PSGRIYISDTVHFNEIEFPYPAL 511
S HKG+KCL +G++YIS V F+E EFP+ L
Sbjct: 588 SNLHKGFKCLEVATGQVYISRDVTFDEQEFPFSKL 622
Score = 61.6 bits (148), Expect = 5e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 165 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
P +EAL D W+EAM E+ AL+ N+TW LVP + +I KW+YK+K KAD
Sbjct: 824 PQNLAEALGDRNWKEAMDKEYYALMKNETWHLVPPKKGINIIDCKWVYKIKRKAD 878
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 183 bits (464), Expect = 1e-43
Identities = 88/155 (56%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L SF GI Q SCP+ H QNG ERKH+HI +IGL+LLA ASMP FW +AF A Y
Sbjct: 579 LNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATY 638
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINRLP V+ F TP L+ P+YK L+ FGC C+P L+PYN HKLQF+S +CVFLG+
Sbjct: 639 LINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGF 698
Query: 612 SPNHKGYKCLH-PSGRIYISDTVHFNEIEFPYPAL 511
S HKG+KCL +G++YIS V F+E EFP+ L
Sbjct: 699 SNLHKGFKCLEVATGQVYISRDVTFDEQEFPFSKL 733
Score = 61.6 bits (148), Expect = 5e-07
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -1
Query: 165 PTRDSEALADPGWQEAMRAEFSALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
P +EAL D W+EAM E+ AL+ N+TW LVP + +I KW+YK+K KAD
Sbjct: 935 PQNLAEALGDRNWKEAMDKEYYALMKNETWHLVPPKKGINIIDCKWVYKIKRKAD 989
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 182 bits (462), Expect = 2e-43
Identities = 87/147 (59%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
Frame = -1
Query: 948 GIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSA 769
GIH Q SCP+ H QNG AERKH+HI ++GL LLAQ+SMP +W AF AVYLINR PS
Sbjct: 599 GIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSK 658
Query: 768 VLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSPNHKGYK 589
+ TP + L P+Y L+ FGC C+P L+PYNQHKLQF+S++CVFLGYS HKG+K
Sbjct: 659 TIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFK 718
Query: 588 CLHPS-GRIYISDTVHFNEIEFPYPAL 511
CL S GRIYIS V F+E FP+ +L
Sbjct: 719 CLDISTGRIYISRDVVFDEHVFPFASL 745
Score = 70.9 bits (172), Expect = 8e-10
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Frame = -1
Query: 231 TRSKHGIFKPKQVFAVSVLP-------QAPTRDSEALADPGWQEAMRAEFSALLDNKTWS 73
TR +HGI KPKQ +V P+ SEALADP W+ AM AEF AL N TW+
Sbjct: 896 TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955
Query: 72 LVPYSPDMKVISNKWIYKVKTKAD 1
LVP +I KW++KVK AD
Sbjct: 956 LVPPDRTRNLIDCKWVFKVKYNAD 979
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 181 bits (459), Expect = 4e-43
Identities = 82/149 (55%), Positives = 108/149 (72%)
Frame = -1
Query: 966 SFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLI 787
S+L + GI + SCP+ QNG AERKH+ I + GLTLL AS+P FW ++F+T VYL
Sbjct: 659 SYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLS 718
Query: 786 NRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSP 607
NRLP+A+L + P +L+K+ P+Y LK FGC+C+P L+PYN HKLQ++S +C FLGYS
Sbjct: 719 NRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSL 778
Query: 606 NHKGYKCLHPSGRIYISDTVHFNEIEFPY 520
HKGYKC+ +GR+YIS V FNE FPY
Sbjct: 779 KHKGYKCMSSNGRVYISHDVIFNETSFPY 807
Score = 74.7 bits (182), Expect = 5e-11
Identities = 39/89 (43%), Positives = 52/89 (58%)
Frame = -1
Query: 267 VATPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSEALADPGWQEAMRAEFSALLD 88
+A NTH M+TR+K GI KPK +F ++ + P+ S AL W++AM AE+ AL
Sbjct: 906 IAKDADNTHPMITRAKSGIVKPK-IFIAAI--REPSSVSAALQQDEWKKAMVAEYDALQR 962
Query: 87 NKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
N TWSLVP + I KW+YK K D
Sbjct: 963 NNTWSLVPLPAGRQAIGCKWVYKTKENPD 991
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 181 bits (459), Expect = 4e-43
Identities = 83/155 (53%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Frame = -1
Query: 972 LVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVY 793
L +F + GI SCP+ H QNG AERKH+HI ++GL+LLA AS+P FW +A+Q+ VY
Sbjct: 420 LNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLKFWDEAYQSGVY 479
Query: 792 LINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGY 613
LINR+P+ VL + +P L+K P+Y+ L+ FGC C+P L+PYN HK+ F+S +C FLGY
Sbjct: 480 LINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMHFRSKRCTFLGY 539
Query: 612 SPNHKGYKCLHPS-GRIYISDTVHFNEIEFPYPAL 511
SP HKG++CL S GRIYIS V F+E FP+ L
Sbjct: 540 SPLHKGFRCLDSSTGRIYISRDVVFDESVFPFAEL 574
Score = 60.5 bits (145), Expect = 1e-06
Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = -1
Query: 264 ATPVQNTHHMVTRSKHGIFKPKQVFAVSVLPQAPTRDSE------ALADPGWQEAMRAEF 103
+TP VT + GI K K +V T E AL D W+ AM A+F
Sbjct: 709 STPEGEASRPVTHLQKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAMDAKF 768
Query: 102 SALLDNKTWSLVPYSPDMKVISNKWIYKVKTKAD 1
+ALL NKTW LVP +I KW+YK+K K D
Sbjct: 769 TALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQD 802
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 180 bits (456), Expect = 9e-43
Identities = 81/152 (53%), Positives = 107/152 (70%)
Frame = -1
Query: 963 FLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLIN 784
+L+D GI + +CP+ H QNG ERKH++ + GL LLAQ+++P FW +F TA YLIN
Sbjct: 705 YLNDLGIVHRFTCPHTHHQNGIVERKHRYTVETGLALLAQSTLPLKFWDHSFVTAAYLIN 764
Query: 783 RLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSPN 604
RLPS L Q+ ++ L P+Y L+ FGC+C+PFL+PYN HKL ++S +C+FLGYS
Sbjct: 765 RLPSVSLNNQSLYFKLLNKQPDYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFLGYSTA 824
Query: 603 HKGYKCLHPSGRIYISDTVHFNEIEFPYPALF 508
HKGYKCL P+G IYIS V F E +FPY LF
Sbjct: 825 HKGYKCLAPNGHIYISKDVLFQESKFPYSTLF 856
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 180 bits (456), Expect = 9e-43
Identities = 86/147 (58%), Positives = 103/147 (70%), Gaps = 1/147 (0%)
Frame = -1
Query: 948 GIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSA 769
GI SCPY H QNG AERKH+HI ++GL+LLA ASMP FW +AF TA YLINR PS
Sbjct: 514 GITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPSK 573
Query: 768 VLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVFLGYSPNHKGYK 589
V+Q+ TP L PNY L+ FGC C+P L+PYN KLQF+S +CVFLGYS HKG+K
Sbjct: 574 VIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNNRKLQFRSKQCVFLGYSNIHKGFK 633
Query: 588 CLH-PSGRIYISDTVHFNEIEFPYPAL 511
CL +GR+YIS V F+E FP+ L
Sbjct: 634 CLDVATGRVYISRDVVFDENIFPFSQL 660