BLASTX nr result
ID: Mentha26_contig00041491
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00041491
(415 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 208 5e-52
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 192 5e-47
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 191 1e-46
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 188 6e-46
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 182 5e-44
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 179 5e-43
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 179 5e-43
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 177 1e-42
emb|CAN79544.1| hypothetical protein VITISV_025323 [Vitis vinifera] 174 9e-42
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 172 3e-41
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 172 3e-41
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 172 3e-41
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 171 1e-40
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 169 3e-40
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 169 5e-40
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 166 3e-39
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 166 4e-39
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 165 7e-39
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 164 9e-39
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 163 2e-38
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 208 bits (530), Expect = 5e-52
Identities = 97/137 (70%), Positives = 111/137 (81%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFW+ LW KLGTKLLFSTTCHPQTDGQTEVVNRTLS LLR ++QKNLK+WEECL
Sbjct: 259 DAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRAIIQKNLKTWEECL 318
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+VHS T FSPFE+VYGFN +ERAS+DGK KAE VK+LH +
Sbjct: 319 PHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLLPLPIDERASMDGKKKAEFVKQLHER 378
Query: 365 VRLNIKKRTEQFAKQAN 415
R +I+KRTEQ+A QAN
Sbjct: 379 TRQHIEKRTEQYATQAN 395
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 192 bits (487), Expect = 5e-47
Identities = 86/137 (62%), Positives = 109/137 (79%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+S+FW+ LW+KLGTKLLFSTTCHPQTDGQTEVVNRTLS LLR L++KNLK+WE+CL
Sbjct: 1524 DTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCL 1583
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYN S+HS + FSPF++VYGFN ER SLDGK KAE+V+++H +
Sbjct: 1584 PHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQ 1643
Query: 365 VRLNIKKRTEQFAKQAN 415
+ NI+++T+Q+AK AN
Sbjct: 1644 AKKNIEEKTKQYAKHAN 1660
>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
Length = 1124
Score = 191 bits (484), Expect = 1e-46
Identities = 89/132 (67%), Positives = 105/132 (79%)
Frame = +2
Query: 20 SHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECLPFAEF 199
S+FW+VLW KLGTKLLFSTTCHPQ DGQTEVVNRTLS LLRT++QKNLK+WE CLPF EF
Sbjct: 878 SYFWKVLWQKLGTKLLFSTTCHPQMDGQTEVVNRTLSTLLRTIIQKNLKNWENCLPFIEF 937
Query: 200 AYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAKVRLNI 379
AYN+SVHSTTNFSPFE+V+GFN E SLDG+ K EMVKKLH V+ +I
Sbjct: 938 AYNQSVHSTTNFSPFEIVHGFNPLTPLDLLPLPINEMISLDGEKKVEMVKKLHESVQKHI 997
Query: 380 KKRTEQFAKQAN 415
+++ EQ+A +AN
Sbjct: 998 ERKNEQYATKAN 1009
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 188 bits (478), Expect = 6e-46
Identities = 84/137 (61%), Positives = 107/137 (78%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR+LW KLGTKLL+ST CHPQTDGQTEVVNRTL+QLLR +++KNLKSWEE L
Sbjct: 1056 DAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNRTLTQLLRVVIRKNLKSWEESL 1115
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P+ EFAYNR++HSTTN SPFEV YGFN ++ +D KA+ +++ H+K
Sbjct: 1116 PYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQGIREFHSK 1175
Query: 365 VRLNIKKRTEQFAKQAN 415
VR I+K+ EQ+A++AN
Sbjct: 1176 VRAQIEKKNEQYAQKAN 1192
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 182 bits (461), Expect = 5e-44
Identities = 88/138 (63%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR LW K+GTKLLFSTTCHPQTDGQTEVVN+TL LLRT+++KNLKSWE CL
Sbjct: 389 DAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLKKNLKSWEACL 448
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEER-ASLDGKAKAEMVKKLHA 361
P EFAYNR+VHSTTN SPFE+VYGFN D +AKAE VKKLH
Sbjct: 449 PHVEFAYNRTVHSTTNCSPFEIVYGFNPLTPLDLLPMPNITMFKHKDAQAKAEYVKKLHE 508
Query: 362 KVRLNIKKRTEQFAKQAN 415
+V+ I+K+ +A+QAN
Sbjct: 509 QVKAQIEKKNASYARQAN 526
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 179 bits (453), Expect = 5e-43
Identities = 83/137 (60%), Positives = 101/137 (73%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+S+FW+ LW KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR L++KNLK WEECL
Sbjct: 1336 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 1395
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+VHSTTN PFEVVYGF +ER+ ++ +A VKK+H K
Sbjct: 1396 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEK 1455
Query: 365 VRLNIKKRTEQFAKQAN 415
+ I+KR++ +A AN
Sbjct: 1456 TKEAIEKRSKYYAAWAN 1472
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 179 bits (453), Expect = 5e-43
Identities = 83/137 (60%), Positives = 101/137 (73%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+S+FW+ LW KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR L++KNLK WEECL
Sbjct: 304 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 363
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+VHSTTN PFEVVYGF +ER+ ++ +A VKK+H K
Sbjct: 364 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEK 423
Query: 365 VRLNIKKRTEQFAKQAN 415
+ I+KR++ +A AN
Sbjct: 424 TKEAIEKRSKYYAAWAN 440
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 177 bits (450), Expect = 1e-42
Identities = 83/137 (60%), Positives = 100/137 (72%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+S+FW+ LW KLGT+LLFSTTCHPQTDGQTEVVNRTLS LLR L++KNLK WEECL
Sbjct: 304 DTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECL 363
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+VHSTTN PFEVVYGF +ER+ ++ A VKK+H K
Sbjct: 364 PHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASKHATYVKKIHEK 423
Query: 365 VRLNIKKRTEQFAKQAN 415
+ I+KR++ +A AN
Sbjct: 424 TKEAIEKRSKYYAAWAN 440
>emb|CAN79544.1| hypothetical protein VITISV_025323 [Vitis vinifera]
Length = 384
Score = 174 bits (442), Expect = 9e-42
Identities = 81/137 (59%), Positives = 99/137 (72%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF S+FW+ LW KLGTKLLFSTTCHPQ D QTEVVN TLS LLR +++KN+K+WEECL
Sbjct: 218 DVKFFSYFWKTLWCKLGTKLLFSTTCHPQIDRQTEVVNMTLSTLLRAIIKKNIKTWEECL 277
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
EFAYN +++S T FSPFE+VYGFN E A+LDGK + + ++H K
Sbjct: 278 SHVEFAYNCTIYSATKFSPFEIVYGFNPLTPLDLRTLPLFEHANLDGKKNTKFIMQIHEK 337
Query: 365 VRLNIKKRTEQFAKQAN 415
VRLNI+KR E + KQAN
Sbjct: 338 VRLNIEKRMEHYGKQAN 354
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 172 bits (437), Expect = 3e-41
Identities = 80/137 (58%), Positives = 102/137 (74%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL +LR +++ L SWE+ L
Sbjct: 794 DAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYL 853
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+ HS+T +PFEVVYGFN + A+LDGK KA+M+KK+H +
Sbjct: 854 PIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQ 913
Query: 365 VRLNIKKRTEQFAKQAN 415
RL I+K+ ++ A + N
Sbjct: 914 TRLAIEKKNKEVALRRN 930
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 172 bits (437), Expect = 3e-41
Identities = 80/137 (58%), Positives = 102/137 (74%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL +LR +++ L SWE+ L
Sbjct: 1286 DAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYL 1345
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+ HS+T +PFEVVYGFN + A+LDGK KA+M+KK+H +
Sbjct: 1346 PIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQ 1405
Query: 365 VRLNIKKRTEQFAKQAN 415
RL I+K+ ++ A + N
Sbjct: 1406 TRLAIEKKNKEVALRRN 1422
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 172 bits (437), Expect = 3e-41
Identities = 80/137 (58%), Positives = 102/137 (74%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR+LW KLGTKLLFST+CHPQTDGQTEVVNRTL +LR +++ L SWE+ L
Sbjct: 1286 DAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYL 1345
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR+ HS+T +PFEVVYGFN + A+LDGK KA+M+KK+H +
Sbjct: 1346 PIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQ 1405
Query: 365 VRLNIKKRTEQFAKQAN 415
RL I+K+ ++ A + N
Sbjct: 1406 TRLAIEKKNKEVALRRN 1422
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 171 bits (432), Expect = 1e-40
Identities = 79/137 (57%), Positives = 99/137 (72%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+S+FW+ LW KLGTKLLFSTTCH Q DGQ EVVNRTLS LLR +++KNLK WE+CL
Sbjct: 935 DVKFMSYFWKTLWAKLGTKLLFSTTCHSQIDGQMEVVNRTLSMLLRMMIKKNLKEWEDCL 994
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNR VHSTT SPFEVVYGFN +ERA+++ +A+ VKK+H K
Sbjct: 995 PHVEFAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANMEATKRADYVKKMHEK 1054
Query: 365 VRLNIKKRTEQFAKQAN 415
+ I++ + +A +AN
Sbjct: 1055 TKETIERIIQSYAAKAN 1071
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 169 bits (429), Expect = 3e-40
Identities = 80/116 (68%), Positives = 89/116 (76%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+S FW+VLW KLGTKLLFSTTCHPQTDGQ EVVNRTLS LLRT++QKNLK+WE+CL
Sbjct: 925 DVKFLSCFWKVLWGKLGTKLLFSTTCHPQTDGQIEVVNRTLSTLLRTIIQKNLKNWEDCL 984
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKK 352
PF EFAYNRSVHSTT+FSPFE+VYGFN E SLD K + V K
Sbjct: 985 PFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLDEKKNEQYVTK 1040
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 169 bits (427), Expect = 5e-40
Identities = 83/123 (67%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR LW K+GTKLLFSTTCHPQTDGQTEVVNRTL LLRT+++KNLKSWE CL
Sbjct: 930 DAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNLKSWEACL 989
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEER-ASLDGKAKAEMVKKLHA 361
P EFAYNR+VHSTTN SPFE+VYGFN D +AKAE VKKLH
Sbjct: 990 PHVEFAYNRAVHSTTNCSPFEIVYGFNPLTPLDLLPMPNIAMFKHKDAQAKAEYVKKLHE 1049
Query: 362 KVR 370
+ R
Sbjct: 1050 QER 1052
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 166 bits (420), Expect = 3e-39
Identities = 76/132 (57%), Positives = 95/132 (71%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR LW KLGTKLLFSTTCHPQTDGQTEVVNR+LS +LR +++ NLK WEECL
Sbjct: 1389 DAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECL 1448
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNRS+HSTT PFE+VYGF E+ + D K +AE++ K+H
Sbjct: 1449 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHEL 1508
Query: 365 VRLNIKKRTEQF 400
+ NI++ ++
Sbjct: 1509 TKENIERMNARY 1520
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 166 bits (419), Expect = 4e-39
Identities = 75/132 (56%), Positives = 95/132 (71%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
DAKF+SHFWR LW KLGTKLLFSTTCHPQTDGQTEVVNR+LS +LR +++ N+K WEECL
Sbjct: 1392 DAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECL 1451
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNRS+HSTT PFE+VYGF E+ + D K +AE++ K+H
Sbjct: 1452 PHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHEL 1511
Query: 365 VRLNIKKRTEQF 400
+ NI++ ++
Sbjct: 1512 TKENIERMNARY 1523
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 165 bits (417), Expect = 7e-39
Identities = 75/132 (56%), Positives = 94/132 (71%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+SHFWR LW KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WEECL
Sbjct: 1333 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1392
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNRS+HSTT PF++VYG E+ + D K +AE++ KLH
Sbjct: 1393 PHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHET 1452
Query: 365 VRLNIKKRTEQF 400
+ NI++ ++
Sbjct: 1453 TKENIERMNAKY 1464
Score = 92.4 bits (228), Expect = 6e-17
Identities = 40/85 (47%), Positives = 59/85 (69%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
+++F SHFW+ L +LGT+L FST HPQTDGQTE +N+ L +L V K+W++ L
Sbjct: 2155 ESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSL 2214
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYG 259
P+AEF+YN S ++ +P+E +YG
Sbjct: 2215 PYAEFSYNNSYQASIQMAPYEALYG 2239
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 164 bits (416), Expect = 9e-39
Identities = 77/127 (60%), Positives = 91/127 (71%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+SHFWR LW KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WEECL
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNRS HSTT PFE+VYG ER + D K +AE++ KLH
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHET 1480
Query: 365 VRLNIKK 385
+ NI++
Sbjct: 1481 TKENIER 1487
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 163 bits (413), Expect = 2e-38
Identities = 77/127 (60%), Positives = 90/127 (70%)
Frame = +2
Query: 5 DAKFVSHFWRVLWNKLGTKLLFSTTCHPQTDGQTEVVNRTLSQLLRTLVQKNLKSWEECL 184
D KF+SHFWR LW KLGTKLLFSTTCHPQTDGQTEVVNRTLS +LR +++KN+K WEECL
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECL 1420
Query: 185 PFAEFAYNRSVHSTTNFSPFEVVYGFNXXXXXXXXXXXXEERASLDGKAKAEMVKKLHAK 364
P EFAYNRS HSTT PFE+VYG ER + D K AE++ KLH
Sbjct: 1421 PHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHET 1480
Query: 365 VRLNIKK 385
+ NI++
Sbjct: 1481 TKENIER 1487