BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00041412
         (377 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   205   6e-51
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   205   6e-51
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus...   189   3e-46
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   180   2e-43
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   178   6e-43
gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlise...   168   8e-40
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   163   2e-38
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   162   4e-38
ref|NP_175971.3| probable RNA polymerase II transcription factor...   162   6e-38
ref|XP_007015597.1| BSD domain (BTF2-like transcription factors,...   161   8e-38
ref|XP_007015596.1| BSD domain (BTF2-like transcription factors,...   161   8e-38
ref|XP_007015595.1| BSD domain (BTF2-like transcription factors,...   161   8e-38
ref|XP_007015594.1| BSD domain (BTF2-like transcription factors,...   161   8e-38
ref|XP_007015593.1| BSD domain (BTF2-like transcription factors,...   161   8e-38
ref|XP_007015592.1| BSD domain (BTF2-like transcription factors,...   161   8e-38
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   161   8e-38
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun...   161   8e-38
gb|AAX22257.1| At3g61420 [Arabidopsis thaliana]                       160   1e-37
ref|NP_191701.4| probable RNA polymerase II transcription factor...   160   1e-37
emb|CAB71072.1| putative protein [Arabidopsis thaliana]               160   1e-37

>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum tuberosum]
          Length = 599

 Score =  205 bits (521), Expect = 6e-51
 Identities = 98/125 (78%), Positives = 110/125 (88%)
 Frame = -1

Query: 377 ALKNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           ALKN+MWSVKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKY
Sbjct: 178 ALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKY 237

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
           SRA+YLHST+N+V            AVFLK+DDML +EARRKIRRVDPT+D+EADEGDDY
Sbjct: 238 SRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDY 297

Query: 17  IHLPD 3
           +HLPD
Sbjct: 298 MHLPD 302


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  205 bits (521), Expect = 6e-51
 Identities = 98/125 (78%), Positives = 110/125 (88%)
 Frame = -1

Query: 377 ALKNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           ALKN+MWSVKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVRQAYL FVP KM+EKEFWTKY
Sbjct: 178 ALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSEKEFWTKY 237

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
           SRA+YLHST+N+V            AVFLK+DDML +EARRKIRRVDPT+D+EADEGDDY
Sbjct: 238 SRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDY 297

Query: 17  IHLPD 3
           +HLPD
Sbjct: 298 MHLPD 302


>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
          Length = 409

 Score =  189 bits (480), Expect = 3e-46
 Identities = 90/120 (75%), Positives = 105/120 (87%)
 Frame = -1

Query: 362 MWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQY 183
           MW+VKPLSDGQSN+VTFNLTPEIIHQIF+EKPAVRQAYLNFVP +++EK+FWTKYS+A+Y
Sbjct: 1   MWTVKPLSDGQSNKVTFNLTPEIIHQIFSEKPAVRQAYLNFVPHRLSEKDFWTKYSKAEY 60

Query: 182 LHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           L+S+RNV             AVFLKRDDMLA+EARRK+RRVDPTVD++ADEGDDYIHL D
Sbjct: 61  LNSSRNVSVAAAEAALDEELAVFLKRDDMLADEARRKVRRVDPTVDMQADEGDDYIHLQD 120


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  180 bits (457), Expect = 2e-43
 Identities = 86/117 (73%), Positives = 98/117 (83%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH 
Sbjct: 189 LKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHC 248

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           TRN V            AVFLK DD+LANEARRKIRRVDPT+D+EAD+GDDY+HLPD
Sbjct: 249 TRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPD 305


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  178 bits (452), Expect = 6e-43
 Identities = 85/117 (72%), Positives = 98/117 (83%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KPL+DG++NRVTFNLTPEIIHQIFAEKPAV QA+LNFVP KMTEK+FW KY RA+YLH 
Sbjct: 232 LKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHC 291

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           TRN V            AVFLK DD+LA+EARRKIRRVDPT+D+EAD+GDDY+HLPD
Sbjct: 292 TRNTVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPD 348


>gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlisea aurea]
          Length = 281

 Score =  168 bits (425), Expect = 8e-40
 Identities = 83/103 (80%), Positives = 87/103 (84%)
 Frame = -1

Query: 377 ALKNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           ALKNEMW VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVR+AYL FVP KMTEKEFWTKY
Sbjct: 179 ALKNEMWIVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVREAYLRFVPEKMTEKEFWTKY 238

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKI 69
           SRA+YLHSTRN+V            AVFLKRDDML NEARRK+
Sbjct: 239 SRAEYLHSTRNIVAAAAEAAEDEELAVFLKRDDMLVNEARRKV 281


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
           gi|548861733|gb|ERN19104.1| hypothetical protein
           AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  163 bits (413), Expect = 2e-38
 Identities = 79/116 (68%), Positives = 94/116 (81%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           V+PL+DG++N+VTF+LTPEIIHQIFAEKPAV QA+L FVP KM+E++FWTKY RA+YLH 
Sbjct: 193 VRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWTKYCRAEYLHR 252

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLP 6
           T+N V            AVFLK DD+LA+EARRKIRRVDPTVD+ AD GDDY HLP
Sbjct: 253 TKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYSHLP 308


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
           lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
           ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  162 bits (410), Expect = 4e-38
 Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 LKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           LK+ M S +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY
Sbjct: 176 LKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKY 235

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
            RA+YL+ST+N              AVFLK D++LA E R+KIRRVDPT+D+EAD+GDDY
Sbjct: 236 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADQGDDY 295

Query: 17  IHLPD 3
            HL D
Sbjct: 296 THLMD 300


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
           [Arabidopsis thaliana]
           gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-1; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
           Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195172|gb|AEE33293.1| probable RNA polymerase II
           transcription factor B subunit 1-1 [Arabidopsis
           thaliana]
          Length = 591

 Score =  162 bits (409), Expect = 6e-38
 Identities = 81/125 (64%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 LKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           LK+ M S +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++N+VP KMTEK+FWTKY
Sbjct: 176 LKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKY 235

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
            RA+YL+ST+N              AVFLK D++LA E R KIRRVDPT+D+EAD+GDDY
Sbjct: 236 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDY 295

Query: 17  IHLPD 3
            HL D
Sbjct: 296 THLMD 300


>ref|XP_007015597.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 6 [Theobroma
           cacao] gi|508785960|gb|EOY33216.1| BSD domain (BTF2-like
           transcription factors, Synapse-associated proteins and
           DOS2-like proteins) isoform 6 [Theobroma cacao]
          Length = 467

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           T+N V            AVFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPD
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD 300


>ref|XP_007015596.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 5,
           partial [Theobroma cacao] gi|508785959|gb|EOY33215.1|
           BSD domain (BTF2-like transcription factors,
           Synapse-associated proteins and DOS2-like proteins),
           putative isoform 5, partial [Theobroma cacao]
          Length = 481

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           T+N V            AVFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPD
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD 300


>ref|XP_007015595.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 4, partial
           [Theobroma cacao] gi|508785958|gb|EOY33214.1| BSD domain
           (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 4, partial
           [Theobroma cacao]
          Length = 516

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 140 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 199

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           T+N V            AVFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPD
Sbjct: 200 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD 256


>ref|XP_007015594.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 3 [Theobroma
           cacao] gi|508785957|gb|EOY33213.1| BSD domain (BTF2-like
           transcription factors, Synapse-associated proteins and
           DOS2-like proteins) isoform 3 [Theobroma cacao]
          Length = 549

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           T+N V            AVFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPD
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD 300


>ref|XP_007015593.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 2, partial
           [Theobroma cacao] gi|508785956|gb|EOY33212.1| BSD domain
           (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 2, partial
           [Theobroma cacao]
          Length = 505

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 140 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 199

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           T+N V            AVFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPD
Sbjct: 200 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD 256


>ref|XP_007015592.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 1
           [Theobroma cacao] gi|508785955|gb|EOY33211.1| BSD domain
           (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 1
           [Theobroma cacao]
          Length = 646

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 353 VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHS 174
           +KP +DG++N+VTFNLTPEII QIFAEKPAV +A+L +VP KM+E++FWTKY RA+YLHS
Sbjct: 184 IKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMSERDFWTKYFRAEYLHS 243

Query: 173 TRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           T+N V            AVFLK+DD+LA+E+R KIRRVDPT+D++ADEGDDY HLPD
Sbjct: 244 TKNSVAAAAEAAEDEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPD 300


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
           gi|482575779|gb|EOA39966.1| hypothetical protein
           CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  161 bits (408), Expect = 8e-38
 Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 LKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           LK+ M S +KP +DG++NRVTFNLTPEII QIFAEKPAVRQA++++VP KMTEK+FWTKY
Sbjct: 176 LKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMTEKDFWTKY 235

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
            RA+YL+ST+N              AVFLK D++LA E R+KIRRVDPT+D+EADEGDDY
Sbjct: 236 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDY 295

Query: 17  IHLPD 3
            HL D
Sbjct: 296 THLMD 300


>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
           gi|462419824|gb|EMJ24087.1| hypothetical protein
           PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score =  161 bits (408), Expect = 8e-38
 Identities = 78/116 (67%), Positives = 92/116 (79%)
 Frame = -1

Query: 350 KPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKYSRAQYLHST 171
           KP++DG+ N+VTFNLTPEI +QIFA KPAV QA+L  VP KMTEK+FWTKY RA+YLHST
Sbjct: 159 KPMTDGRMNKVTFNLTPEIKYQIFALKPAVHQAFLTLVPSKMTEKDFWTKYFRAEYLHST 218

Query: 170 RNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDYIHLPD 3
           RN V            A+FLK D +LA+EARRKIRRVDPT+D+EAD+GDDY HLPD
Sbjct: 219 RNAVAAAAEAAEDEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPD 274


>gb|AAX22257.1| At3g61420 [Arabidopsis thaliana]
          Length = 332

 Score =  160 bits (406), Expect = 1e-37
 Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 LKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           LK+ M S +KP +DG++NRVTFNLT EII QIFAEKPAVRQA++N+VP+KMTEK+FWTKY
Sbjct: 171 LKSMMVSGIKPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPKKMTEKDFWTKY 230

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
            RA+YL+ST+N              AVFLK D++LA EAR+K+RRVDPT+D++ADEGDDY
Sbjct: 231 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILAQEARQKMRRVDPTLDMDADEGDDY 290

Query: 17  IHLPD 3
            HL D
Sbjct: 291 THLMD 295


>ref|NP_191701.4| probable RNA polymerase II transcription factor B subunit 1-3
           [Arabidopsis thaliana]
           gi|325530300|sp|Q9M322.2|TFB1C_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-3; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-3; Short=AtTFB1-3;
           Short=TFIIH subunit TFB1-3 gi|332646679|gb|AEE80200.1|
           probable RNA polymerase II transcription factor B
           subunit 1-3 [Arabidopsis thaliana]
          Length = 579

 Score =  160 bits (406), Expect = 1e-37
 Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 LKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           LK+ M S +KP +DG++NRVTFNLT EII QIFAEKPAVRQA++N+VP+KMTEK+FWTKY
Sbjct: 171 LKSMMVSGIKPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPKKMTEKDFWTKY 230

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
            RA+YL+ST+N              AVFLK D++LA EAR+K+RRVDPT+D++ADEGDDY
Sbjct: 231 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILAQEARQKMRRVDPTLDMDADEGDDY 290

Query: 17  IHLPD 3
            HL D
Sbjct: 291 THLMD 295


>emb|CAB71072.1| putative protein [Arabidopsis thaliana]
          Length = 566

 Score =  160 bits (406), Expect = 1e-37
 Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 LKNEMWS-VKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPRKMTEKEFWTKY 198
           LK+ M S +KP +DG++NRVTFNLT EII QIFAEKPAVRQA++N+VP+KMTEK+FWTKY
Sbjct: 146 LKSMMVSGIKPSTDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPKKMTEKDFWTKY 205

Query: 197 SRAQYLHSTRNVVXXXXXXXXXXXXAVFLKRDDMLANEARRKIRRVDPTVDIEADEGDDY 18
            RA+YL+ST+N              AVFLK D++LA EAR+K+RRVDPT+D++ADEGDDY
Sbjct: 206 FRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILAQEARQKMRRVDPTLDMDADEGDDY 265

Query: 17  IHLPD 3
            HL D
Sbjct: 266 THLMD 270