BLASTX nr result

ID: Mentha26_contig00040139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00040139
         (406 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006384485.1| hypothetical protein POPTR_0004s15500g, part...    56   6e-06

>ref|XP_006384485.1| hypothetical protein POPTR_0004s15500g, partial [Populus
           trichocarpa] gi|550341103|gb|ERP62282.1| hypothetical
           protein POPTR_0004s15500g, partial [Populus trichocarpa]
          Length = 87

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
 Frame = +1

Query: 31  LIMSGLVDIWTAEQAKLKSKGQAGLSTGSAPAPGQAAANEKKGAGSSLWWQAGLARVE-- 204
           L MSGLVDIWT E AKL+ KGQA  S+GS+P   +++       GS    +   A +   
Sbjct: 5   LAMSGLVDIWTGELAKLREKGQAVWSSGSSPTNVESSKVVPGEEGSLRLVKPLPASIRGM 64

Query: 205 --KLPALHCSEASFSMLMDSIS 264
             K PAL  SEAS SML+D ++
Sbjct: 65  RVKSPALTYSEASLSMLVDCLN 86


Top