BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00039897
         (936 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              409   e-128
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]   398   e-123
emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]   386   e-121
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             389   e-118
emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]   376   e-118
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   376   e-117
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   376   e-117
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   386   e-117
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     374   e-116
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         373   e-115
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   372   e-114
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   366   e-113
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   368   e-113
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-...   365   e-112
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati...   365   e-112
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]   374   e-112
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]        364   e-112
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  366   e-112
emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]                363   e-112
emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]        363   e-112

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  409 bits (1052), Expect(2) = e-128
 Identities = 199/253 (78%), Positives = 222/253 (87%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNITVKYRHPIPRLDDMLDELHGS +FSK+DL+SGYHQIR+KEGDEW
Sbjct: 957  DGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEW 1016

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKT  GLYEWLVMPFGLTNAPSTFMRLMNHVLRA+IGRFV+VYFDDIL+YS S +EH
Sbjct: 1017 KTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEH 1076

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            VEHL++VL  LR+EKLY NLKKC F TD LVFLGFVVS  GV+VDEEK++AI+EWPS KS
Sbjct: 1077 VEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKS 1136

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
             G+VRSFHGLA FYRRFV  FS++AAPLTEVIKKNV F W + QE AFQ LK KLTHA V
Sbjct: 1137 VGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPV 1196

Query: 897  LSLPNFTKSFEIE 935
            LSLP+F K+FEIE
Sbjct: 1197 LSLPDFLKTFEIE 1209



 Score = 75.5 bits (184), Expect(2) = e-128
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = +2

Query: 2    RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
            RGIEHQIDFV GA+LPNRPAYRTNP ETKELE+ + EL+ +GH+R
Sbjct: 896  RGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVTELMERGHIR 940


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score =  398 bits (1023), Expect(2) = e-123
 Identities = 191/253 (75%), Positives = 220/253 (86%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D RAINNITVKYRHPIPRLDDMLDELHGSCVF KIDL+SGYHQIR+KEGDEW
Sbjct: 245  DGTWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCVFIKIDLKSGYHQIRMKEGDEW 304

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNA STFMRLMNHVLRA+IGRFVVVYFDDIL+YS + DEH
Sbjct: 305  KTAFKTKYGLYEWLVMPFGLTNALSTFMRLMNHVLRAFIGRFVVVYFDDILVYSKNLDEH 364

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            + HL  VL  LR+EKLY NLKKC FC DK+VFLG+VVSA+G++VDEEK++AI+EWP+ KS
Sbjct: 365  INHLHCVLAILRKEKLYANLKKCSFCMDKVVFLGYVVSAKGIEVDEEKLKAIKEWPTPKS 424

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
              +VRSFHGLASFY RFV  FS++AAPLTE++KK+V F WG EQ+ AF  +K +L  A +
Sbjct: 425  ITEVRSFHGLASFYFRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGAPL 484

Query: 897  LSLPNFTKSFEIE 935
            LSLPNF+K+FEIE
Sbjct: 485  LSLPNFSKTFEIE 497



 Score = 72.4 bits (176), Expect(2) = e-123
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQIDFV GAT+PNR AYR+N EETKEL+R + ELL KGHVR
Sbjct: 184 RGIEHQIDFVPGATIPNRLAYRSNLEETKELQRQVEELLTKGHVR 228


>emb|CAN75188.1| hypothetical protein VITISV_032368 [Vitis vinifera]
          Length = 771

 Score =  386 bits (991), Expect(2) = e-121
 Identities = 184/253 (72%), Positives = 215/253 (84%)
 Frame = +3

Query: 177 DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
           D T +MC D RAINNI VKYRHPIPRLDDMLDELHGSCVF+KIDL+SGYHQIR+KEGDEW
Sbjct: 152 DGTWRMCVDCRAINNIMVKYRHPIPRLDDMLDELHGSCVFTKIDLKSGYHQIRMKEGDEW 211

Query: 357 KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
           KT FKTK GLYEWLVMPFGLTNAPSTFMRLMNH LR++IGRFVVVYFDDIL+YS + DEH
Sbjct: 212 KTTFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHALRSFIGRFVVVYFDDILVYSKNLDEH 271

Query: 537 VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
           + HL  VL  LR+ KLY NLKKC FC DK+VFLG+VVSA+G++VDEEK++AI+EWP+ K 
Sbjct: 272 INHLHCVLDVLRKXKLYANLKKCSFCMDKVVFLGYVVSAKGIEVDEEKVKAIKEWPTPKL 331

Query: 717 FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
             +VRSFHGLASFYRRFV  FS +AAPLTE++KK+V F WG EQ+ AF  +K KL  A +
Sbjct: 332 ITEVRSFHGLASFYRRFVKDFSILAAPLTEIVKKSVGFKWGSEQDRAFIEIKEKLCGAPL 391

Query: 897 LSLPNFTKSFEIE 935
           L+L +F+K+ EIE
Sbjct: 392 LALLDFSKTVEIE 404



 Score = 79.0 bits (193), Expect(2) = e-121
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQIDFV GAT+PNRPAYR NPEETKEL+R + ELL KGHVR
Sbjct: 91  RGIEHQIDFVPGATIPNRPAYRGNPEETKELQRQVEELLTKGHVR 135


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  389 bits (999), Expect(2) = e-118
 Identities = 181/253 (71%), Positives = 219/253 (86%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAI+NIT+KYRHPIPRLDD+LDEL G+C+FSKIDL+SGYHQIRI+EGDEW
Sbjct: 655  DGSWRMCTDCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRIREGDEW 714

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEW+VMPFGLTNAPSTFMRLMNHVLR ++G+FVVVYFDDILIYS + D+H
Sbjct: 715  KTAFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDH 774

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HL+ VL  LR E LY NL+KC+FCTD ++FLGF+VS++GV VDEEK++AI+EWP  K+
Sbjct: 775  CIHLKAVLQVLRYENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIREWPPPKN 834

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
              +VRSFHGLASFYRRFV  FS++AAPL E+++K+V F WG++QE AF  LK KLT A V
Sbjct: 835  VSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKLTQAPV 894

Query: 897  LSLPNFTKSFEIE 935
            L+LPNF+KSFEIE
Sbjct: 895  LALPNFSKSFEIE 907



 Score = 64.3 bits (155), Expect(2) = e-118
 Identities = 28/45 (62%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEH ID   GA+LPNRPAYR+NP++T+E++R + EL++KG VR
Sbjct: 594 RGIEHHIDLNPGASLPNRPAYRSNPQQTQEIQRQVAELISKGWVR 638


>emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]
          Length = 1089

 Score =  376 bits (966), Expect(2) = e-118
 Identities = 180/253 (71%), Positives = 212/253 (83%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D R INNITV YRH IPRLDDMLDELHGSCV  KIDL+SGYHQIR+KEGDEW
Sbjct: 491  DETWRMCVDCRVINNITVNYRHLIPRLDDMLDELHGSCVLIKIDLKSGYHQIRMKEGDEW 550

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYE LVMPFGLTNAPSTFMRLMNH LRA+IGRFVVVYF DIL+YS + +EH
Sbjct: 551  KTAFKTKYGLYEXLVMPFGLTNAPSTFMRLMNHALRAFIGRFVVVYFYDILVYSKNLBEH 610

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            + HL  VL  LR+EKLY NLKKC FC DK+VFLG+VVS +G++VDEEK++AI+EWP+ KS
Sbjct: 611  IXHLHCVLTVLRKEKLYANLKKCSFCMDKVVFLGYVVSXKGIEVDEEKVKAIKEWPTPKS 670

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
              +VRSFHGL SFYRRFV  FS++A PLTE++KK+V F WG EQ+ AF  +K +L  A +
Sbjct: 671  IXEVRSFHGLXSFYRRFVKDFSTLAIPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGAPL 730

Query: 897  LSLPNFTKSFEIE 935
            L+LP+F+K+FEIE
Sbjct: 731  LALPDFSKTFEIE 743



 Score = 75.5 bits (184), Expect(2) = e-118
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQIDFV  AT PNRPAYR+NP+ETKEL+R + ELL KGHVR
Sbjct: 430 RGIEHQIDFVPSATFPNRPAYRSNPKETKELQRQVEELLTKGHVR 474


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  376 bits (966), Expect(2) = e-117
 Identities = 180/253 (71%), Positives = 212/253 (83%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D RAIN ITVKYRHPIPRLDDMLD+L GS +FSKIDL+SGYHQIR+  GDEW
Sbjct: 748  DGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEW 807

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNHV + + G+F+VVYFDDILI+S + DEH
Sbjct: 808  KTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEH 867

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            +EHL+ V   LR ++L+ NLKKC FC D++VFLGFVVS+ GV+VD+EKI+AI+EWP   S
Sbjct: 868  LEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNS 927

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
              +VRSFHGLASFYRRFV  FS++AAPLTEVIKK+  F WGKEQ+ AF LLK KL  A +
Sbjct: 928  VTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPL 987

Query: 897  LSLPNFTKSFEIE 935
            L LP+F+KSFE+E
Sbjct: 988  LQLPDFSKSFEVE 1000



 Score = 73.9 bits (180), Expect(2) = e-117
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQIDFV G+ LPNRPAYR+NPEETKEL+R + ELL KG VR
Sbjct: 687 RGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVR 731


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  376 bits (966), Expect(2) = e-117
 Identities = 180/253 (71%), Positives = 212/253 (83%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D RAIN ITVKYRHPIPRLDDMLD+L GS +FSKIDL+SGYHQIR+  GDEW
Sbjct: 748  DGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCGSKIFSKIDLKSGYHQIRLNPGDEW 807

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNHV + + G+F+VVYFDDILI+S + DEH
Sbjct: 808  KTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFKDFHGKFIVVYFDDILIFSQNLDEH 867

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            +EHL+ V   LR ++L+ NLKKC FC D++VFLGFVVS+ GV+VD+EKI+AI+EWP   S
Sbjct: 868  LEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFVVSSMGVEVDDEKIKAIKEWPKPNS 927

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
              +VRSFHGLASFYRRFV  FS++AAPLTEVIKK+  F WGKEQ+ AF LLK KL  A +
Sbjct: 928  VTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPL 987

Query: 897  LSLPNFTKSFEIE 935
            L LP+F+KSFE+E
Sbjct: 988  LQLPDFSKSFEVE 1000



 Score = 73.9 bits (180), Expect(2) = e-117
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQIDFV G+ LPNRPAYR+NPEETKEL+R + ELL KG VR
Sbjct: 687 RGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEELLVKGFVR 731


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  386 bits (992), Expect(2) = e-117
 Identities = 188/253 (74%), Positives = 214/253 (84%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINN+TVKY HPIPRLDDMLDELHGS +FSKIDL+SGYHQIR+ EGDEW
Sbjct: 466  DGSWRMCFDCRAINNVTVKYCHPIPRLDDMLDELHGSSIFSKIDLKSGYHQIRMNEGDEW 525

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLT+APSTFMRLMNHVLRA+IG FV+VYFDDIL+YS S  EH
Sbjct: 526  KTAFKTKHGLYEWLVMPFGLTHAPSTFMRLMNHVLRAFIGIFVIVYFDDILVYSESLREH 585

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            +EHL  VL  LR+E+LY NLKKC FCTD LVFLGFVVSA GV+VDEEK++AI++WPS K+
Sbjct: 586  IEHLDSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKT 645

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
             G+VRSFHGLA FYRRF   FS++ APLTEV+KK+V F W K QE AFQ LK KLT+A V
Sbjct: 646  VGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNAPV 705

Query: 897  LSLPNFTKSFEIE 935
            L L  F K+FEIE
Sbjct: 706  LILSEFLKTFEIE 718



 Score = 63.5 bits (153), Expect(2) = e-117
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER 100
           RGIEHQIDFV GA+LPNRPAYRTNP ETKEL+R
Sbjct: 431 RGIEHQIDFVPGASLPNRPAYRTNPVETKELQR 463


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  374 bits (959), Expect(2) = e-116
 Identities = 177/253 (69%), Positives = 213/253 (84%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNITV+YRHPIPRLDDMLDEL GS +FSKIDLRSG+HQIR+K GDEW
Sbjct: 768  DGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEW 827

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNHVLRA+IG+FVVVYFDDILIYS + +EH
Sbjct: 828  KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEH 887

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            V H++ VL  LR+E+LY NL+KC FCTD++VFLGFVVS  G+QVDE K++AI++WP+ ++
Sbjct: 888  VAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPEN 947

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               V+SF GLA FYRRFV  FS++AAPL E+ KK V F WG+ QE AFQ LK +L+   +
Sbjct: 948  VSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSEGPL 1007

Query: 897  LSLPNFTKSFEIE 935
            L LP+FTK+FE+E
Sbjct: 1008 LVLPDFTKTFEVE 1020



 Score = 73.6 bits (179), Expect(2) = e-116
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GATLPNRPAYRTNPEETKE++R +  LL KG+VR
Sbjct: 707 RGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVR 751


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  373 bits (957), Expect(2) = e-115
 Identities = 178/253 (70%), Positives = 208/253 (82%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D RAINNIT++YRHPIPRLDDMLDEL G+ VFSK+DLRSGYHQIR+K GDEW
Sbjct: 768  DGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEW 827

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMN VLRA+IG+FVVVYFDDILIYS S DEH
Sbjct: 828  KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEH 887

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            V+H+R V  ALR  +L+ NL+KC FCTD++ FLG+VV+ QG++VD+ K+ AI  WP  K+
Sbjct: 888  VDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKT 947

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL E+ KK V F WGK QE AF +LK KLTHA +
Sbjct: 948  ITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPL 1007

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 1008 LQLPDFNKTFELE 1020



 Score = 69.3 bits (168), Expect(2) = e-115
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 707 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVR 751


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  372 bits (955), Expect(2) = e-114
 Identities = 179/253 (70%), Positives = 214/253 (84%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D RAINNITVKYR+PIPRLDDMLDELHG+ +FSKIDLR GYHQIR+++GDEW
Sbjct: 708  DGTWRMCVDCRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQIRMQKGDEW 767

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMNHVLR +IG+FVVVYFDDILIYS    +H
Sbjct: 768  KTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDILIYSKDPQKH 827

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            + HL+ V   LR+E+LY NL+KC F  + +VFLGF+VS++G++VDE KI+AI++WP+ K+
Sbjct: 828  IIHLKEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSSKGIEVDETKIQAIRDWPTPKT 887

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSFHGLASFYRRFV  FS++AAPL E++KK+V+F WG +QE AFQ LK KL  A V
Sbjct: 888  ATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQEQAFQTLKEKLCSAQV 947

Query: 897  LSLPNFTKSFEIE 935
            LSLPNF K+FEIE
Sbjct: 948  LSLPNFDKTFEIE 960



 Score = 66.6 bits (161), Expect(2) = e-114
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNRPAYRTNP+E KE++R + ELL  G ++
Sbjct: 647 RGIEHQIDLIPGASLPNRPAYRTNPDEAKEIQRQVDELLQAGFIQ 691


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  366 bits (940), Expect(2) = e-113
 Identities = 175/253 (69%), Positives = 204/253 (80%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNIT++YRHPIPRLDDMLDEL GS VFSK+DLRSGYHQIR+K GDEW
Sbjct: 765  DGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEW 824

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR +IG+FVVVYFDDILIYS S  EH
Sbjct: 825  KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEH 884

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HLR V  ALR  +L+ NL+KC FCTD++ FLG+VV+ QG++VD+ K+ AIQ WP+ K+
Sbjct: 885  FNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKT 944

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL  + KK V F WG  QE AF +LK KLTHA +
Sbjct: 945  VSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPL 1004

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 1005 LQLPDFNKTFELE 1017



 Score = 69.3 bits (168), Expect(2) = e-113
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 704 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVR 748



 Score =  196 bits (498), Expect = 1e-47
 Identities = 103/237 (43%), Positives = 143/237 (60%), Gaps = 2/237 (0%)
 Frame = +3

Query: 228  VKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEWKT--AFKTKLGLYEWLV 401
            +++  PI R           C   ++D    +H+     GD+  T  +     GLYE+ V
Sbjct: 1575 IQHDGPITRARARQLNYQDECPRGRVD---AHHKFAATIGDDRATNPSGFASYGLYEFTV 1631

Query: 402  MPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEHVEHLRLVLGALRQEK 581
            M FGLTNAP+ FM LMN V   Y+ +FVVV+ DDIL+YS S ++H  HLRLVLG LR+ +
Sbjct: 1632 MSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQ 1691

Query: 582  LYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKSFGDVRSFHGLASFYR 761
            LY  L KC F   ++ FLG V+SA+GV VD E + A+ +W   K+   +RSF GLA +YR
Sbjct: 1692 LYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYR 1751

Query: 762  RFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALVLSLPNFTKSFEI 932
            RF+  FS +A P+T+++KK  +F W  + E AFQ LK KL  + VL LP+  K F +
Sbjct: 1752 RFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMV 1808


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  368 bits (944), Expect(2) = e-113
 Identities = 178/253 (70%), Positives = 206/253 (81%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D R INNIT++YRHPIPRLDDMLDEL GS +FSK+DLRSGYHQIR+K GDEW
Sbjct: 809  DGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIFSKVDLRSGYHQIRMKLGDEW 868

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLRA+IGRFVVVYFDDILIYS S +EH
Sbjct: 869  KTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSKSLEEH 928

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            +EHLR V  ALR  +L+ NL KC FCTD++ FLG+VV+ QG++VD+ KI AI+ WP  K+
Sbjct: 929  LEHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKT 988

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL EV KK+V F WG  QE AF +LK KLT+A +
Sbjct: 989  VTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVLKDKLTYAPL 1048

Query: 897  LSLPNFTKSFEIE 935
            L LPNF K+FE+E
Sbjct: 1049 LQLPNFNKTFELE 1061



 Score = 67.4 bits (163), Expect(2) = e-113
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE+ R + ELL KG++R
Sbjct: 748 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIR 792


>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|108864301|gb|ABA93040.2|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1748

 Score =  365 bits (937), Expect(2) = e-112
 Identities = 174/253 (68%), Positives = 203/253 (80%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNIT++YRHPIPRLDDMLDEL GS VFSK+DLRSGYHQIR+K GDEW
Sbjct: 1107 DGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEW 1166

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR +IG+FVVVYFDDILIYS S  EH
Sbjct: 1167 KTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEH 1226

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HLR V  ALR  +L+ NL+KC FCTD++ FLG+VV+ QG++VD+ K+ AIQ WP+ K+
Sbjct: 1227 FNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKT 1286

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL  + KK V F WG  QE AF +LK KLTHA +
Sbjct: 1287 VSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPL 1346

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 1347 LQLPDFNKTFELE 1359



 Score = 69.3 bits (168), Expect(2) = e-112
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2    RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
            RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 1046 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVR 1090


>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
          Length = 1739

 Score =  365 bits (937), Expect(2) = e-112
 Identities = 174/253 (68%), Positives = 203/253 (80%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNIT++YRHPIPRLDDMLDEL GS VFSK+DLRSGYHQIR+K GDEW
Sbjct: 1098 DGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEW 1157

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR +IG+FVVVYFDDILIYS S  EH
Sbjct: 1158 KTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEH 1217

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HLR V  ALR  +L+ NL+KC FCTD++ FLG+VV+ QG++VD+ K+ AIQ WP+ K+
Sbjct: 1218 FNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKT 1277

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL  + KK V F WG  QE AF +LK KLTHA +
Sbjct: 1278 VSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPL 1337

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 1338 LQLPDFNKTFELE 1350



 Score = 69.3 bits (168), Expect(2) = e-112
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2    RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
            RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 1037 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVR 1081


>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
          Length = 1323

 Score =  374 bits (960), Expect(2) = e-112
 Identities = 178/242 (73%), Positives = 208/242 (85%)
 Frame = +3

Query: 210  AINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEWKTAFKTKLGLY 389
            AINNI VKYRHPIPRLDDMLDELHGSCVF+KIDL+SGYHQIR+KEGDEWKT FKTK GLY
Sbjct: 573  AINNIXVKYRHPIPRLDDMLDELHGSCVFTKIDLKSGYHQIRMKEGDEWKTXFKTKYGLY 632

Query: 390  EWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEHVEHLRLVLGAL 569
            EWLVMPFGLTNAPSTFMRLMNH L  +IGRFVVVYFDDIL+YS + DEH+ HL  VL  L
Sbjct: 633  EWLVMPFGLTNAPSTFMRLMNHALHXFIGRFVVVYFDDILVYSKNLDEHINHLHCVLAXL 692

Query: 570  RQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKSFGDVRSFHGLA 749
            R+EKLY NLKK  FC DK+VFLG+VVS +G++VDEEK++AI+EWP+  S  +VRSFHGLA
Sbjct: 693  RKEKLYANLKKFSFCMDKVVFLGYVVSXKGIEVDEEKVKAIKEWPTPXSITEVRSFHGLA 752

Query: 750  SFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALVLSLPNFTKSFE 929
            SFYRRFV  FS++AAPLTE++KK+V F WG EQ+ AF  +K +L  A +LSLP+F+K+FE
Sbjct: 753  SFYRRFVKDFSTLAAPLTEIVKKSVGFKWGSEQDRAFIEIKERLCGAPLLSLPDFSKTFE 812

Query: 930  IE 935
            IE
Sbjct: 813  IE 814



 Score = 60.5 bits (145), Expect(2) = e-112
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELL 118
           RGIEHQIDFV GAT+PN P YR+NP ETKEL+R + E +
Sbjct: 536 RGIEHQIDFVPGATIPNXPTYRSNPXETKELQRQVEEAI 574


>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
          Length = 2241

 Score =  364 bits (934), Expect(2) = e-112
 Identities = 174/253 (68%), Positives = 202/253 (79%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINN T++YRHPIPRLDDMLDEL GS VFSK+DLRSGYHQIR+K GDEW
Sbjct: 859  DGSWRMCVDCRAINNNTIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEW 918

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KT FKTK GLYEWLVMPFGLTNAPSTFMRLMN VLR +IG+FVVVYFDDILIYS S  EH
Sbjct: 919  KTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEH 978

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HLR V  ALR  +L+ NLKKC FCTD++ FLG+VV+ QG++VD+ K+ AIQ WP+ K+
Sbjct: 979  FNHLRAVFNALRDARLFGNLKKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKT 1038

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL  + KK V F WG  QE AF +LK KLTHA +
Sbjct: 1039 VSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPL 1098

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 1099 LQLPDFNKTFELE 1111



 Score = 69.3 bits (168), Expect(2) = e-112
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 798 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVR 842



 Score =  119 bits (297), Expect = 2e-24
 Identities = 65/195 (33%), Positives = 105/195 (53%)
 Frame = +3

Query: 348  DEWKTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSH 527
            D+ KT F    G Y +  M FGL NAP++F R M  +    I   + ++ DD  +Y  + 
Sbjct: 2013 DQSKTTFTCPYGTYAYRRMSFGLCNAPASFQRCMMSIFSDMIEDIMEIFMDDFSVYGKTF 2072

Query: 528  DEHVEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPS 707
               +++L  VL   +++ L +N +KC F   + + LG  VS +G++ D  KI  I + P 
Sbjct: 2073 GHCLQNLDKVLQRCQEKDLVLNWEKCHFMVREGIVLGHRVSERGIEFDRAKIDVIDQLPP 2132

Query: 708  SKSFGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTH 887
              +   +RSF G A FYRRF+  FS++A PLT ++ K+  F +      +F++LK  L  
Sbjct: 2133 PVNIKGIRSFLGHADFYRRFIKDFSTIARPLTNLLAKDTPFEFDDACLKSFEILKKALDS 2192

Query: 888  ALVLSLPNFTKSFEI 932
              ++  P++T  FEI
Sbjct: 2193 GPIIQPPDWTLPFEI 2207


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  366 bits (939), Expect(2) = e-112
 Identities = 175/253 (69%), Positives = 207/253 (81%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D T +MC D R INNIT++YRHPIPRLDDMLDEL GS +FSK+DLRSGYHQIR+K GDEW
Sbjct: 821  DGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSIIFSKVDLRSGYHQIRMKLGDEW 880

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAPSTFMRLMN VLRA+IGRFVVVYFDDILIYS S ++H
Sbjct: 881  KTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSLEDH 940

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
            ++HLR V  ALR  +L+ NL KC FCTD++ FLG+VV+ QG++VD+ KI AI+ WP  K+
Sbjct: 941  LDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKT 1000

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL E+ KK+V + WG  QE AF +LK KLTHA +
Sbjct: 1001 VTQVRSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPL 1060

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 1061 LQLPDFNKTFELE 1073



 Score = 67.4 bits (163), Expect(2) = e-112
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE+ R + ELL KG++R
Sbjct: 760 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYIR 804


>emb|CAH66606.1| H0211A12.9 [Oryza sativa Indica Group]
          Length = 1667

 Score =  363 bits (933), Expect(2) = e-112
 Identities = 173/253 (68%), Positives = 203/253 (80%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNIT++YRHPIPRLDDMLDEL GS VFSK+DLRSGYHQIR+  GDEW
Sbjct: 688  DGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMNLGDEW 747

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAP+TFMRLMN VLR +IG+FVVVYFDDILIYS S  EH
Sbjct: 748  KTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEH 807

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HLR V  ALR  +L+ NL+KC FCTD++ FLG+VV+ QG++VD+ K+ AIQ WP+ K+
Sbjct: 808  FNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKT 867

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL  + KK V F WG  QE AF +LK KLTHA +
Sbjct: 868  VSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPL 927

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 928  LQLPDFNKTFELE 940



 Score = 69.3 bits (168), Expect(2) = e-112
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 627 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVR 671


>emb|CAE02411.2| OSJNBa0024J22.19 [Oryza sativa Japonica Group]
          Length = 1667

 Score =  363 bits (933), Expect(2) = e-112
 Identities = 173/253 (68%), Positives = 203/253 (80%)
 Frame = +3

Query: 177  DSTMKMCCDGRAINNITVKYRHPIPRLDDMLDELHGSCVFSKIDLRSGYHQIRIKEGDEW 356
            D + +MC D RAINNIT++YRHPIPRLDDMLDEL GS VFSK+DLRSGYHQIR+  GDEW
Sbjct: 688  DGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMNLGDEW 747

Query: 357  KTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAYIGRFVVVYFDDILIYSTSHDEH 536
            KTAFKTK GLYEWLVMPFGLTNAP+TFMRLMN VLR +IG+FVVVYFDDILIYS S  EH
Sbjct: 748  KTAFKTKFGLYEWLVMPFGLTNAPTTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEH 807

Query: 537  VEHLRLVLGALRQEKLYVNLKKCIFCTDKLVFLGFVVSAQGVQVDEEKIRAIQEWPSSKS 716
              HLR V  ALR  +L+ NL+KC FCTD++ FLG+VV+ QG++VD+ K+ AIQ WP+ K+
Sbjct: 808  FNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKT 867

Query: 717  FGDVRSFHGLASFYRRFVPYFSSVAAPLTEVIKKNVEFYWGKEQETAFQLLKYKLTHALV 896
               VRSF GLA FYRRFV  FS++AAPL  + KK V F WG  QE AF +LK KLTHA +
Sbjct: 868  VSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPL 927

Query: 897  LSLPNFTKSFEIE 935
            L LP+F K+FE+E
Sbjct: 928  LQLPDFNKTFELE 940



 Score = 69.3 bits (168), Expect(2) = e-112
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RGIEHQIDFVLGATLPNRPAYRTNPEETKELER*IGELLAKGHVR 136
           RGIEHQID + GA+LPNR  YRTNPEETKE++R + ELL KG+VR
Sbjct: 627 RGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVR 671