BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00039846
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42535.1| hypothetical protein MIMGU_mgv1a019040mg [Mimulus...   172   6e-41
ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   167   2e-39
ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]     156   3e-36
gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlise...   144   1e-32
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [A...   105   5e-21
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...   100   3e-19
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr...    99   5e-19
ref|XP_006838872.1| hypothetical protein AMTR_s00002p00267080 [A...    99   8e-19
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...    98   1e-18
ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily pr...    97   2e-18
ref|XP_007137504.1| hypothetical protein PHAVU_009G132500g [Phas...    97   2e-18
gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]      97   3e-18
ref|XP_006433083.1| hypothetical protein CICLE_v10003904mg [Citr...    97   3e-18
gb|AEP33763.1| organelle transcript processing 82, partial [Isat...    97   3e-18
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...    96   4e-18
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...    96   4e-18
emb|CBI15077.3| unnamed protein product [Vitis vinifera]               96   4e-18

>gb|EYU42535.1| hypothetical protein MIMGU_mgv1a019040mg [Mimulus guttatus]
          Length = 514

 Score =  172 bits (435), Expect = 6e-41
 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 3/120 (2%)
 Frame = +2

Query: 47  MIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLIGMYAAFAR 217
           M+ T++KPD Y   F+++S +R++S V GQ+VHGM VKNG   NLYVANSLI MYA FAR
Sbjct: 1   MLDTRSKPDKYSFTFVISSSARRSSVVHGQIVHGMVVKNGYLQNLYVANSLISMYAVFAR 60

Query: 218 VDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDVSWAVMVSGFVSC 397
           VDDAC+VF+EMP+RDVFSWTSLV AY KNG M RA  +F +MP+RNDVSWAVM+SGFVSC
Sbjct: 61  VDDACKVFEEMPDRDVFSWTSLVGAYTKNGNMQRASNIFWEMPLRNDVSWAVMISGFVSC 120


>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  167 bits (422), Expect = 2e-39
 Identities = 83/141 (58%), Positives = 107/141 (75%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIAT----QAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGT 160
           SK+++S EPI+LF RM+      Q  PD+Y   F++TSCS Q S + G++VHGM VK+G 
Sbjct: 150 SKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVVKSGF 209

Query: 161 FLNLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGK 340
             NLYV NS+I M + FAR++DA +VF++M ERDVFSWTSL+  YAK+GEM RACE+F  
Sbjct: 210 ESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRACELFNM 269

Query: 341 MPVRNDVSWAVMVSGFVSCRR 403
           MPVRNDVSWAVM+SGF+ C R
Sbjct: 270 MPVRNDVSWAVMISGFLGCGR 290


>ref|XP_006345185.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 547

 Score =  157 bits (398), Expect = 1e-36
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 7/135 (5%)
 Frame = +2

Query: 5   KLQHSSEPINLFRRMIATQAK----PDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTF 163
           KLQ+SSE   LFR+++    +    PD+Y   F++TSC+ Q S V G++VHG+ V+NG  
Sbjct: 107 KLQNSSESFCLFRQLLNLDHRIRVFPDEYTFTFIVTSCAHQKSIVHGKIVHGLVVRNGLE 166

Query: 164 LNLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            NLYV NSLI MY+ F   DDA +VFD + ERDVFSWTSL+  YA NGEM++ACE+F KM
Sbjct: 167 SNLYVGNSLINMYSVFKITDDAYKVFDRITERDVFSWTSLICGYANNGEMYQACEIFYKM 226

Query: 344 PVRNDVSWAVMVSGF 388
           PVRNDVSWAV++SGF
Sbjct: 227 PVRNDVSWAVIISGF 241


>ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 618

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/135 (57%), Positives = 101/135 (74%), Gaps = 7/135 (5%)
 Frame = +2

Query: 5   KLQHSSEPINLFRRMI----ATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTF 163
           KLQ+SSE  +LFR+++      +  PD+Y   F++TSC+ Q S V G++VHG+ V+NG  
Sbjct: 118 KLQNSSESFSLFRQLLNLDHPIRVLPDEYTFTFIVTSCAHQKSFVHGKIVHGLVVRNGLE 177

Query: 164 LNLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            NLYV NSLI MY+ F   DDA +VFD + +RDVFSWTSL+  YA NGEM++ACE+F KM
Sbjct: 178 SNLYVGNSLINMYSVFKITDDAYKVFDRIADRDVFSWTSLICGYANNGEMYQACEIFYKM 237

Query: 344 PVRNDVSWAVMVSGF 388
           PVRNDVSWAV++SGF
Sbjct: 238 PVRNDVSWAVIISGF 252


>gb|EXC31176.1| hypothetical protein L484_004942 [Morus notabilis]
          Length = 660

 Score =  156 bits (394), Expect = 3e-36
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIAT----QAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGT 160
           SKLQ+S E ++LF +M+A     +A PD Y   F++TSCS QNS  CG+VVHGMAVKNG 
Sbjct: 123 SKLQNSQESLHLFTQMLAMNEGLKAVPDKYTFTFVITSCSHQNSMHCGEVVHGMAVKNGL 182

Query: 161 FLNLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGK 340
            L+L+V NS+I +YA FAR +DA +VFD MPERD F+WT L+  Y + GE+  A  +F  
Sbjct: 183 ELDLFVGNSVINVYAFFARWEDAQKVFDGMPERDAFTWTGLLRGYTRGGEIDEAFRLFDG 242

Query: 341 MPVRNDVSWAVMVSGFVSCRR 403
            P+RN VSWAVM+SGFV C R
Sbjct: 243 RPIRNSVSWAVMISGFVDCER 263



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
 Frame = +2

Query: 23  EPINLFRRMIAT-QAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSL 190
           E +  F  MI+  + KPD+  +   L++C+   +   G  +HG    N    +  +  +L
Sbjct: 266 EALGCFHDMISEGKVKPDEVILVSVLSACAHLGALHQGNWIHGYINGNRIKFSSSIITAL 325

Query: 191 IGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDVSWA 370
           I MYA   R+D A QVF     RDVF++TS+V+  + +G    A +VF +M   N +   
Sbjct: 326 IDMYAKCGRIDRAKQVFHAASRRDVFNYTSMVNGLSLHGLGKEALQVFSQMLEENVIPND 385

Query: 371 VMVSGFVS 394
           + + G ++
Sbjct: 386 ITILGLLN 393


>gb|EPS59463.1| hypothetical protein M569_15345, partial [Genlisea aurea]
          Length = 433

 Score =  144 bits (364), Expect = 1e-32
 Identities = 75/138 (54%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIATQ--AKPDDYF---MLTSCSRQNSAVCGQVVHGMAVKNGTFL 166
           +KL++ SE I LFR MIA       D+Y    +LTSC+ Q     G+ VHGMA++NG   
Sbjct: 77  AKLRYRSESIALFRGMIAAGEFVAADEYTFNSVLTSCAHQQDVESGRAVHGMAMRNGFSS 136

Query: 167 NLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGE-MWRACEVFGKM 343
           NLYV NSLI +Y AF   D+A +VFDEM  RD+FSWTSL+ A+++NG+ M +ACE+FG+M
Sbjct: 137 NLYVGNSLISVYGAFGLGDEAHKVFDEMSGRDIFSWTSLIRAHSQNGKNMEKACEIFGQM 196

Query: 344 PVRNDVSWAVMVSGFVSC 397
           P+RN+VSW V+VSGFV C
Sbjct: 197 PLRNEVSWTVIVSGFVKC 214


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  125 bits (314), Expect = 6e-27
 Identities = 69/139 (49%), Positives = 92/139 (66%), Gaps = 6/139 (4%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIA--TQAKPDDY---FMLTSCSRQNSAV-CGQVVHGMAVKNGTF 163
           SK   S E + LF +M+A       D Y   F+ T+CSR  +    G+ VHGM VK+G  
Sbjct: 130 SKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYE 189

Query: 164 LNLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            +++V NSL+ MY+ F+R+ DA +VFDEMP+RDV +WTS+V  YA  GE+ RA E+F  M
Sbjct: 190 SDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMM 249

Query: 344 PVRNDVSWAVMVSGFVSCR 400
           P RNDVSWAVMV+G+V  R
Sbjct: 250 PGRNDVSWAVMVAGYVGHR 268



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
 Frame = +2

Query: 20  SEPINLFRRMIA-TQAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANS 187
           +E +  F  M+   + KP++  +   L++C+   +   G+ +H    KN   L+  ++ +
Sbjct: 271 NEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTA 330

Query: 188 LIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGE----MWRACEVFGKMPVRN 355
           LI MYA   R+D A +VFD + +RD+ +WTS++S  + +G     +W   E+  +    +
Sbjct: 331 LIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPD 390

Query: 356 DVSWAVMVSG 385
           D++   +++G
Sbjct: 391 DITLLGVLNG 400


>ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [Amborella trichopoda]
           gi|548850756|gb|ERN09103.1| hypothetical protein
           AMTR_s00014p00090010 [Amborella trichopoda]
          Length = 845

 Score =  105 bits (263), Expect = 5e-21
 Identities = 54/129 (41%), Positives = 85/129 (65%), Gaps = 3/129 (2%)
 Frame = +2

Query: 11  QHSSEPINLFRRMIATQAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVA 181
           Q+  E + LFR + A++  PD++ +   LT  +  N+   G+ +HG  VK G  L++ V+
Sbjct: 109 QNYHEGLALFRELQASRLDPDEFTVSNVLTISANLNALEEGKQIHGFIVKKGFVLDVTVS 168

Query: 182 NSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDV 361
           NSLI MY+  A +DDA +VF+ + +RDV+SWT++VS YA+NG+   A ++F +MP RN V
Sbjct: 169 NSLINMYSKCACMDDAERVFEAITQRDVYSWTAMVSGYAQNGKTEAAMKLFNEMPQRNVV 228

Query: 362 SWAVMVSGF 388
           SW  M+ G+
Sbjct: 229 SWNAMIGGY 237



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
 Frame = +2

Query: 20  SEPINLFRRMIATQAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSL 190
           +E  +L   MI    +P+++ +   L SCS +N    G  +HG A+K G  +++ + N L
Sbjct: 375 TEAFSLLSDMIKAGVRPNEHTLSSLLNSCSGKNKTGFG--LHGFAIKMGFEVDISIGNCL 432

Query: 191 IGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDVSWA 370
           + MY     +++A  VF  MP  DV SWT++VSAY  N  +  A + F  MP +N +SW 
Sbjct: 433 VTMYGEQRCMNNAYMVFQSMPRHDVVSWTAMVSAYLTNQRIEEARQTFESMPQQNLISWN 492

Query: 371 VMVSGFV 391
            M+SG++
Sbjct: 493 TMISGYL 499



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
 Frame = +2

Query: 38  FRRMIATQAKPDD---YFMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLIGMYAA 208
           F +M+  + KP+      +L +C+   +   G+ +    +K+GT  + +V  ++I M+A 
Sbjct: 250 FVKMLKEREKPNQSSFVSVLKACAGLQTIETGKQIQSYLIKSGTEADAHVGTAIIEMHAK 309

Query: 209 FARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDVSWAVMVSGF 388
           F  +  A + F E  E +V SW+ LV AY +NG +  A  +F +MP +N +S+ +MVS +
Sbjct: 310 FGDIISAHKSF-EASEHNVVSWSVLVGAYTQNGYITEAASLFQEMPKKNVISYNIMVSAY 368

Query: 389 V 391
           V
Sbjct: 369 V 369



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
 Frame = +2

Query: 8   LQHSSEPINLFRRMIATQAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           L  + + + LF +M  +  +PD++     LT+C+   +      +H + +      +  V
Sbjct: 523 LSGAEDALTLFYKMEQSGIRPDNFTYNCALTACAAIGALHQASTIHAITIHRAYDSDKGV 582

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            N+L+  Y+    + +A Q+F+ + E D  SW +L++ YA+NG+     E F +M
Sbjct: 583 TNALMAAYSKCGSLQNAEQIFNNLEEPDTISWNTLITGYAQNGQGNHVLEFFNEM 637


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  100 bits (248), Expect = 3e-19
 Identities = 54/130 (41%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
 Frame = +2

Query: 17  SSEPIN---LFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           SS+P++   L+  MI+    P+ Y   F+L SC++  +   GQ +HG  +K G  L+LYV
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
             SLI MY    R++DA +VFDE P RDV S+T+L+  YA  G +  A ++F ++PV++ 
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 359 VSWAVMVSGF 388
           VSW  M+SG+
Sbjct: 189 VSWNAMISGY 198



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDDYFMLT---SCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E + LF+ M+ T  +PD+  M+T   +C++  S   G+ VH     +G   NL + N+LI
Sbjct: 206 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALI 265

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            +Y+    ++ AC +F+ +P +DV SW +L+  Y        A  +F +M
Sbjct: 266 DLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 315


>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
           gi|557095503|gb|ESQ36085.1| hypothetical protein
           EUTSA_v10006910mg [Eutrema salsugineum]
          Length = 740

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 55/131 (41%), Positives = 82/131 (62%), Gaps = 6/131 (4%)
 Frame = +2

Query: 17  SSEPIN---LFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           SS+P++   L+  MI+    P+ Y   F+L SC++ N+   GQ +HG  +K G  L+LYV
Sbjct: 111 SSDPVSSLKLYVSMISLGLLPNSYTFPFLLKSCAKSNTLREGQQIHGHVLKFGYGLDLYV 170

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
             SLI MYA   R++DA QVFD    RDV S+T+L++ YA  G    A ++F ++P ++ 
Sbjct: 171 HTSLISMYAQNGRLEDAQQVFDRSSHRDVVSYTALITGYASRGYTQSAQKMFDEIPDKDV 230

Query: 359 VSWAVMVSGFV 391
           VSW  M+SG+V
Sbjct: 231 VSWNAMISGYV 241



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDDYFMLT---SCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E   LF  M+ +   PD+  M+T   +C++  S   G+ VH     +G   NL + N+LI
Sbjct: 248 EAFELFEDMMKSNVSPDESTMVTVLSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALI 307

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
            +Y+    V  AC +F+ M  +DV SW +L+  Y        A  +F +M   N+
Sbjct: 308 DLYSKCGEVATACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNE 362


>ref|XP_006838872.1| hypothetical protein AMTR_s00002p00267080 [Amborella trichopoda]
           gi|548841378|gb|ERN01441.1| hypothetical protein
           AMTR_s00002p00267080 [Amborella trichopoda]
          Length = 275

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
 Frame = +2

Query: 8   LQHSSEP---INLFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLN 169
           L +SS P   +  +R + A   + D +   F+L +CSR  SA  G  +HG AVK G   +
Sbjct: 116 LSNSSNPHLALEFYRNLQAEGLETDHHAPTFLLKACSRMGSATLGHAIHGRAVKTGLESD 175

Query: 170 LYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPV 349
           LY+ N+L+  YA+F  VDDA +VFDEMP RD+ SW +L++ Y +N +   A + F KM +
Sbjct: 176 LYIGNALVHAYASFGEVDDANKVFDEMPMRDMVSWNALINGYVENAQFREAFQQFSKMGL 235

Query: 350 RN 355
            N
Sbjct: 236 EN 237


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 53/130 (40%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
 Frame = +2

Query: 17  SSEPIN---LFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           SS+P++   L+  MI+    P+ Y   F+L SC++  +   GQ +HG  +K G  L+LYV
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
             SLI MY    R++DA +VFD+ P RDV S+T+L+  YA  G +  A ++F ++PV++ 
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231

Query: 359 VSWAVMVSGF 388
           VSW  M+SG+
Sbjct: 232 VSWNAMISGY 241



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDDYFMLT---SCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E + LF+ M+ T  +PD+  M+T   +C++  S   G+ VH     +G   NL + N+LI
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            +Y+    ++ AC +F+ +P +DV SW +L+  Y        A  +F +M
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358


>ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao] gi|508774669|gb|EOY21925.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative [Theobroma cacao]
          Length = 551

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 6/135 (4%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNL 172
           S+ ++  + + L+ +M+AT A PD +   ++L++C+R      G+ VHG  + +G   N+
Sbjct: 93  SRTENPEKSVELYNQMVATGAIPDGFTYSYLLSACARSGMLREGEQVHGKVLADGYCSNV 152

Query: 173 YVANSLIGMYAAFARVDD---ACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
           +V  +L+ +YA     D    A +VFDEM ER+V SW SL++ Y + G++  A  VF +M
Sbjct: 153 FVRTNLVNLYAMVGGGDGIGYARRVFDEMGERNVVSWNSLLAGYIRYGDVHMARRVFDEM 212

Query: 344 PVRNDVSWAVMVSGF 388
           P RN VSW  MV+GF
Sbjct: 213 PERNVVSWTTMVAGF 227


>ref|XP_007137504.1| hypothetical protein PHAVU_009G132500g [Phaseolus vulgaris]
           gi|561010591|gb|ESW09498.1| hypothetical protein
           PHAVU_009G132500g [Phaseolus vulgaris]
          Length = 693

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
 Frame = +2

Query: 17  SSEPINLFRRMIATQAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANS 187
           + E + +F RM +T  +P ++     L +CS  ++   G  +HG+ VK G   +  +++S
Sbjct: 241 AKEAVFMFSRMFSTAVQPMNFTFSNALVACSSVSALREGMQIHGVVVKLGLQEDNVISSS 300

Query: 188 LIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDVSW 367
           L+ MY    +++D  +VFD +  RD+ SWTS+VSAYA +G+   A ++F KMP RN VSW
Sbjct: 301 LVNMYVKCHKLEDGSRVFDLLGSRDLVSWTSIVSAYAMSGKTLEARKLFDKMPERNVVSW 360

Query: 368 AVMVSGFVSC 397
             M++G+V C
Sbjct: 361 NAMLAGYVRC 370


>gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]
          Length = 508

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 4/127 (3%)
 Frame = +2

Query: 23  EPINLFRRMI-ATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSL 190
           + IN+++ M+ ++   PD+Y   ++L +CSR  SA  G  VHG  +K+G   +L+V NSL
Sbjct: 71  QTINIYKEMLHSSNIAPDNYTLPYVLKACSRLQSACLGVSVHGHGLKSGLAFDLFVGNSL 130

Query: 191 IGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRNDVSWA 370
           I MY+ F  ++ A QVFDEMP     SW  ++S Y K GE+ +    F   PVR+   W 
Sbjct: 131 IVMYSEFRNMEAARQVFDEMPSLSTVSWMVMISGYGKVGEVDKERLFFDLAPVRDRGIWG 190

Query: 371 VMVSGFV 391
            M+SG+V
Sbjct: 191 AMISGYV 197



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDDYF---MLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E + LFR M   + +PD+     +L  C+   +   G  +H    + G  L++ +   L+
Sbjct: 204 EGLYLFRLMQCAEIEPDEAIFVSVLCGCAHLGALDVGVWIHRYLDRLGLPLSVRLGTGLV 263

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            MYA    +D A  VF++MP++D   W +++SA A +G+   A E+F +M
Sbjct: 264 DMYAKCGNLDLARMVFEKMPQKDTVCWNAMISAMAMHGDGDTAFELFEEM 313


>ref|XP_006433083.1| hypothetical protein CICLE_v10003904mg [Citrus clementina]
           gi|568835434|ref|XP_006471776.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g48910-like [Citrus sinensis]
           gi|557535205|gb|ESR46323.1| hypothetical protein
           CICLE_v10003904mg [Citrus clementina]
          Length = 649

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNL 172
           S+  + S  ++LF R+I     P+++   F+   C+       G  +HGM VKN    ++
Sbjct: 90  SRSHYLSTSLHLFYRLIDLNVAPNNFTFTFLFQGCASCAHFDLGTQLHGMVVKNSFAYDV 149

Query: 173 YVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVR 352
           +V NSLI  Y+   RV DA  VFDE  + DV SW S+++ + +NGE+    ++F KMP R
Sbjct: 150 FVKNSLIQFYSVCGRVRDARWVFDESDDLDVVSWNSMINGHVRNGEILEGLKLFDKMPQR 209

Query: 353 NDVSWAVMVSGFV 391
           NDVSW  ++ G V
Sbjct: 210 NDVSWNSILGGLV 222



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 182 NSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRN-D 358
           NS++G    F  VDDAC+VF++MP+R + SW  L+S +A+NG    A  +F +M   + +
Sbjct: 215 NSILGGLVRFGSVDDACRVFNQMPKRSLVSWVVLISGFAQNGRPKEALALFREMQSLDLE 274

Query: 359 VSWAVMVSGFVSC 397
            + A++VS   +C
Sbjct: 275 PNSAILVSLLSAC 287


>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/130 (39%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
 Frame = +2

Query: 17  SSEPIN---LFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           SS+P++   L+  M++    P+ Y   F+L SC++  +   GQ +HG  +K G  L+LYV
Sbjct: 42  SSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYV 101

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
             SLI MY    R++DA +VFD    RDV S+T+L++ YA  G++  A ++F ++PV++ 
Sbjct: 102 HTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDV 161

Query: 359 VSWAVMVSGF 388
           VSW  M+SG+
Sbjct: 162 VSWNAMISGY 171



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDD---YFMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E + LF  M+    +PD+     +L++C+   S   G+ VH     +G   NL + N+LI
Sbjct: 179 EALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALI 238

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            +Y+    V+ AC +F  +  +DV SW +L+  Y        A  +F +M
Sbjct: 239 DLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEM 288


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 52/130 (40%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
 Frame = +2

Query: 17  SSEPIN---LFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           SS+P++   L+  MI+    P+ Y   F+L SC++  +   GQ +HG  +K G  L+LYV
Sbjct: 111 SSDPVSALYLYVCMISLGLVPNSYTFPFLLKSCAKSRAFREGQQIHGHVLKLGCDLDLYV 170

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
             SLI MY    R++DA +VFD+   RDV S+T+L+  YA NG +  A ++F ++PV++ 
Sbjct: 171 HTSLIAMYVKNGRLEDARKVFDQSSHRDVVSYTALIKGYASNGYIESAQKMFDEIPVKDV 230

Query: 359 VSWAVMVSGF 388
           VSW  ++SG+
Sbjct: 231 VSWNALISGY 240



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDDYFMLT---SCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E + LF+ M+ T  KPD+  M+T   +C +  S   G+ VH     +G   NL + N+LI
Sbjct: 248 EALELFKEMMQTNVKPDESTMVTVLSACGQSASIELGRQVHSWIDDHGFGSNLKIVNALI 307

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            +Y     V+ A  +F+ +  +DV SW +L+  Y        A  +F +M
Sbjct: 308 DLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEM 357


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/130 (40%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
 Frame = +2

Query: 17  SSEPIN---LFRRMIATQAKPDDY---FMLTSCSRQNSAVCGQVVHGMAVKNGTFLNLYV 178
           SS+P++   L+  MI+    P+ Y   F+L SC++  +   GQ +HG  +K G   +LYV
Sbjct: 44  SSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYV 103

Query: 179 ANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKMPVRND 358
             SLI MYA   R++DA +VFD    RDV S+T+L++ YA +G +  A E+F ++PV++ 
Sbjct: 104 HTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDV 163

Query: 359 VSWAVMVSGF 388
           VSW  M+SG+
Sbjct: 164 VSWNAMISGY 173



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
 Frame = +2

Query: 23  EPINLFRRMIATQAKPDDYFMLT---SCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLI 193
           E + LF+ M+ T  +PD+  M+T   +C++  S   G+ VH     +G   NL + N+LI
Sbjct: 181 EALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI 240

Query: 194 GMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVFGKM 343
            +Y+   +V+ AC +F+ +  +DV SW +L+  Y        A  +F +M
Sbjct: 241 DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEM 290


>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = +2

Query: 38  FRRMIATQAKPDDYFML---TSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANSLIGMYAA 208
           F  M+A   KPDD  +L     CS  +  V  ++VHGM VK+G   NLYV NS+I M + 
Sbjct: 349 FSEMLAEGFKPDDITLLGVLNGCSH-SGLVEEEIVHGMVVKSGFESNLYVGNSVINMCSV 407

Query: 209 FARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMWRACEVF 334
           FAR++DA +VF++M ERDVFSWTSL+  YAK+GEM RA   F
Sbjct: 408 FARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTF 449



 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 59/141 (41%), Positives = 85/141 (60%), Gaps = 9/141 (6%)
 Frame = +2

Query: 2   SKLQHSSEPINLFRRMIA--TQAKPDDY---FMLTSCSRQNSAV-CGQVVHGMAVKNGTF 163
           SK   S E + LF +M+A       D Y   F+ T+CSR  +    G+ VHGM VK+G  
Sbjct: 130 SKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYE 189

Query: 164 LNLYVANSLIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGEMW-RACEVFGK 340
            +++V NSL+ MY+ F+R+ DA +VFDEMP+RDV +WTS+V  YA  GE +  A + F  
Sbjct: 190 SDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFND 249

Query: 341 MPVRNDV--SWAVMVSGFVSC 397
           M   ++V  + AV+VS   +C
Sbjct: 250 MLCHDEVKPNEAVLVSILSAC 270



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
 Frame = +2

Query: 20  SEPINLFRRMIA-TQAKPDDYFM---LTSCSRQNSAVCGQVVHGMAVKNGTFLNLYVANS 187
           +E +  F  M+   + KP++  +   L++C+   +   G+ +H    KN   L+  ++ +
Sbjct: 241 NEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTA 300

Query: 188 LIGMYAAFARVDDACQVFDEMPERDVFSWTSLVSAYAKNGE----MWRACEVFGKMPVRN 355
           LI MYA   R+D A +VFD + +RD+ +WTS++S  + +G     +W   E+  +    +
Sbjct: 301 LIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPD 360

Query: 356 DVSWAVMVSG 385
           D++   +++G
Sbjct: 361 DITLLGVLNG 370