BLASTX nr result
ID: Mentha26_contig00039822
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00039822
(584 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 86 7e-34
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc... 91 1e-33
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 89 2e-33
gb|AAB82754.1| retrofit [Oryza longistaminata] 88 3e-33
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 84 4e-33
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 94 5e-33
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 89 1e-32
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 91 2e-32
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 91 3e-32
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 91 3e-32
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group] 90 3e-32
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 91 3e-32
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 87 4e-32
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 85 5e-32
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 89 6e-32
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 87 1e-31
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 87 1e-31
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 87 1e-31
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 84 1e-31
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 84 2e-31
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 85.5 bits (210), Expect(3) = 7e-34
Identities = 43/96 (44%), Positives = 60/96 (62%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+I +Q+ F LK +G + Y LG+EV KT G + Q KYI ++L K M +C+ TPM
Sbjct: 535 VITNMQNAFALKDLGKLSYFLGIEVTKTASGIYLSQSKYIADILAKHNMADCSPVPTPMA 594
Query: 222 TVPKVTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
T +T+ G + N S Y+S VG LQY+TLTRP+I
Sbjct: 595 TGHYLTKGSGSVISNSSQYKSAVGALQYVTLTRPEI 630
Score = 60.8 bits (146), Expect(3) = 7e-34
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQF 3
+ +SVNKLSQF+ +PT HW +CKRLLRYL+GT+ GL F
Sbjct: 630 IAFSVNKLSQFLASPTAEHWESCKRLLRYLKGTIHFGLHF 669
Score = 44.3 bits (103), Expect(3) = 7e-34
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -2
Query: 583 APRA*YNTLKN-YIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQDEV 416
APRA + LK+ +V+ G S SD SLF++ + + +L+YVDDI++TG S V
Sbjct: 476 APRAWFERLKDAMVVKWGFQNSRSDNSLFYKWIGDQVIFVLVYVDDIIITGSSDKMV 532
>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1180
Score = 90.9 bits (224), Expect(3) = 1e-33
Identities = 45/98 (45%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ LQ +F LK +GD+HY LG+EV K +G ++ Q+KY +LL+++ M++C S +
Sbjct: 776 LLQDLQKEFALKDLGDLHYFLGIEVNKISNGIILTQEKYANDLLKRVGMIDCKPVSASLS 835
Query: 222 TVPKVTRLEGHM--FDNPSLYRSVVGILQYMTLTRPDI 115
T K+T EG + ++ S YRSVVG LQY+TLTRPDI
Sbjct: 836 TSEKLTLHEGDLLGLNDASNYRSVVGALQYLTLTRPDI 873
Score = 51.6 bits (122), Expect(3) = 1e-33
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQ 6
+ + VNK+ QF+ APTT+HWA KR+LRYL+ LGL+
Sbjct: 873 IAFPVNKVCQFLHAPTTIHWATVKRILRYLKQCTKLGLK 911
Score = 47.4 bits (111), Expect(3) = 1e-33
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQDEVLHMK 404
APRA Y L + +LG S +D SLF +G+ +LIYVDDI++ QD VL +
Sbjct: 718 APRAWYARLSQKLQQLGFQGSKADTSLFFYNKQGLTIFVLIYVDDIIVASSRQDAVLTLL 777
Query: 403 YD 398
D
Sbjct: 778 QD 779
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 89.4 bits (220), Expect(3) = 2e-33
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L +F LK +GD+HY LG+EV K +G ++ Q+KY +LL+++ M C STP+
Sbjct: 1138 LLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLS 1197
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
K+T EG ++ + YRS+VG LQY+TLTRPDI
Sbjct: 1198 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDI 1235
Score = 53.1 bits (126), Expect(3) = 2e-33
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ YSVNK+ QF+ APTT HW A KR+LRYL SLGL
Sbjct: 1235 IAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGL 1272
Score = 46.6 bits (109), Expect(3) = 2e-33
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQ 425
APRA Y+ L +VELG S +D SLF G++ +L+YVDDI++ ++
Sbjct: 1080 APRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTE 1132
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 88.2 bits (217), Expect(3) = 3e-33
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L +F LK +GD+HY LG+EV K +G ++ Q+KY +LL+++ M C STP+
Sbjct: 1147 LLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLS 1206
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
K+T EG ++ YRS+VG LQY+TLTRPDI
Sbjct: 1207 VSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDI 1244
Score = 53.5 bits (127), Expect(3) = 3e-33
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ YSVNK+ QF+ APTT HW A KR+LRYL SLGL
Sbjct: 1244 IAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGL 1281
Score = 47.0 bits (110), Expect(3) = 3e-33
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQ 425
APRA Y+ L +VELG S +D SLF G+L +L+YVDDI++ ++
Sbjct: 1089 APRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTE 1141
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 84.0 bits (206), Expect(3) = 4e-33
Identities = 43/100 (43%), Positives = 64/100 (64%)
Frame = -3
Query: 414 YI*NMIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCS 235
+I ++I L S F +K +G VHY LG+E V + Q KYI +LL+K K+ +
Sbjct: 1080 HISHLIHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLHDSRPYP 1139
Query: 234 TPMVTVPKVTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
TP+++ K++ +G ++PS YRS+VG LQY+TLTRPDI
Sbjct: 1140 TPVLSGKKLSVYDGVKLEDPSEYRSIVGALQYLTLTRPDI 1179
Score = 55.8 bits (133), Expect(3) = 4e-33
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQDEVLHM 407
APRA + +Y+ ELG S +D+S+F +G+ ++LIYVDDIL+TG++ + H+
Sbjct: 1026 APRAWFRCFSDYLEELGFLESRADYSMFTFNNRGIYIILLIYVDDILITGNNSSHISHL 1084
Score = 48.5 bits (114), Expect(3) = 4e-33
Identities = 19/40 (47%), Positives = 31/40 (77%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQF 3
+ Y+VN++ QF+ +PT +HW A KR+LRYL+ T++ GL +
Sbjct: 1179 ICYAVNQVCQFMHSPTNVHWVAVKRILRYLKYTLNHGLVY 1218
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 94.0 bits (232), Expect(3) = 5e-33
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ LQ F LK +GD+HY LG+EV K G ++ Q+KY+ +LL ++ M +C STP+
Sbjct: 958 LLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLS 1017
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
T K+T EG + ++ S YRSVVG LQY+TLTRPDI
Sbjct: 1018 TSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDI 1055
Score = 50.4 bits (119), Expect(3) = 5e-33
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQ 6
+ + VNK+ QF+ APT +HWAA KR+LRYL+ LGL+
Sbjct: 1055 IYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLK 1093
Score = 43.5 bits (101), Expect(3) = 5e-33
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQDEV 416
APRA Y L + LG S +D SLF G++ +L+YVDDI++ QD V
Sbjct: 900 APRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAV 955
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 88.6 bits (218), Expect(3) = 1e-32
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L +F LK +GD+HY LG+EV K +G ++ Q+KY ++L+++ M C STP+
Sbjct: 1150 LLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLS 1209
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
K+T EG ++ + YRS+VG LQY+TLTRPDI
Sbjct: 1210 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDI 1247
Score = 53.5 bits (127), Expect(3) = 1e-32
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ YSVNK+ QF+ APTT HW A KR+LRYL SLGL
Sbjct: 1247 IAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGL 1284
Score = 44.7 bits (104), Expect(3) = 1e-32
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQ 425
APRA Y+ L + ELG S +D SLF G++ +L+YVDDI++ ++
Sbjct: 1092 APRAWYSRLSKKLTELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTE 1144
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 90.5 bits (223), Expect(3) = 2e-32
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L F LK +GD+HY LG+EV K G M+ Q+KY +LL ++ M EC STP+
Sbjct: 517 LLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLS 576
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
T K++ EG + + + YRSVVG LQY+TLTRPDI
Sbjct: 577 TSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDI 614
Score = 55.8 bits (133), Expect(3) = 2e-32
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = -1
Query: 116 YSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQF 3
+S+NK+ QF+ APTT HWAA KR+LRY++ TV GL+F
Sbjct: 616 FSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKF 653
Score = 39.3 bits (90), Expect(3) = 2e-32
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQD 422
APRA Y+ L + ELG S +D SLF V +LIYVDDI++ D
Sbjct: 459 APRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPD 512
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 90.5 bits (223), Expect(3) = 3e-32
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L F LK +GD+HY LG+EV K G M+ Q+KY +LL ++ M EC STP+
Sbjct: 1095 LLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLS 1154
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
T K++ EG + + + YRSVVG LQY+TLTRPDI
Sbjct: 1155 TSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDI 1192
Score = 55.8 bits (133), Expect(3) = 3e-32
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = -1
Query: 116 YSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQF 3
+S+NK+ QF+ APTT HWAA KR+LRY++ TV GL+F
Sbjct: 1194 FSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKF 1231
Score = 38.9 bits (89), Expect(3) = 3e-32
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQD 422
APRA Y+ L + ELG S +D SLF V +LIYVDDI++ D
Sbjct: 1037 APRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPD 1090
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 91.3 bits (225), Expect(3) = 3e-32
Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Frame = -3
Query: 390 LQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMVTVPK 211
LQ +F LK +GD+HY LG+EV K G ++ Q KY+ +LL ++ M +C STP+ T K
Sbjct: 953 LQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEK 1012
Query: 210 VTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
++ EG ++ + YRSVVG LQY+TLTRPDI
Sbjct: 1013 LSINEGDPLGPNDATHYRSVVGALQYLTLTRPDI 1046
Score = 50.8 bits (120), Expect(3) = 3e-32
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQ 6
+ + VNK+ QF+ APTT HWAA KR+LRYL+ LGL+
Sbjct: 1046 IAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLK 1084
Score = 43.1 bits (100), Expect(3) = 3e-32
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQDEV 416
APRA Y+ L + ++G S +D SLF ++ +LIYVDDI++T Q+ V
Sbjct: 891 APRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAV 946
>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
Length = 950
Score = 89.7 bits (221), Expect(3) = 3e-32
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L +F LK +GD+HY LG+EV K +G ++ Q+KY +LL+++ M C STP+
Sbjct: 215 LLKDLNKEFALKDLGDLHYFLGIEVTKVSNGIILTQEKYANDLLKRVNMSNCKPVSTPLS 274
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
K+T EG ++ + YRS+VG LQY+TLTRPDI
Sbjct: 275 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDI 312
Score = 52.4 bits (124), Expect(3) = 3e-32
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ YSVNK+ QF+ APTT HW KR+LRYL SLGL
Sbjct: 312 IAYSVNKVCQFLHAPTTRHWTGVKRILRYLNQCTSLGL 349
Score = 43.1 bits (100), Expect(3) = 3e-32
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQ 425
A RA Y+ L +VELG S +D SLF G++ +L+YVDDI++ ++
Sbjct: 157 ATRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTE 209
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 90.5 bits (223), Expect(3) = 3e-32
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L F LK +GD+HY LG+EV K G M+ Q+KY +LL ++ M EC STP+
Sbjct: 87 LLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLS 146
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
T K++ EG + + + YRSVVG LQY+TLTRPDI
Sbjct: 147 TSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDI 184
Score = 55.8 bits (133), Expect(3) = 3e-32
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = -1
Query: 116 YSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQF 3
+S+NK+ QF+ APTT HWAA KR+LRY++ TV GL+F
Sbjct: 186 FSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKF 223
Score = 38.9 bits (89), Expect(3) = 3e-32
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQD 422
APRA Y+ L + ELG S +D SLF V +LIYVDDI++ D
Sbjct: 29 APRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPD 82
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 87.0 bits (214), Expect(3) = 4e-32
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = -3
Query: 390 LQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMVTVPK 211
L ++F LK +G++ Y LG+E +T G + QK+Y+ +LLEK ML + TPM PK
Sbjct: 1152 LAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPK 1211
Query: 210 VTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
++ G D PS YR+V+G LQY++ TRPDI
Sbjct: 1212 LSLTSGTPLDKPSEYRAVLGSLQYLSFTRPDI 1243
Score = 52.4 bits (124), Expect(3) = 4e-32
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ Y+VN+LSQ++ PT LHW A KR+LRYL GT S G+
Sbjct: 1243 IAYAVNRLSQYMHCPTDLHWQAAKRILRYLAGTPSHGI 1280
Score = 45.4 bits (106), Expect(3) = 4e-32
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTG 434
APRA Y L++Y++ G S +D SLF K + +L+YVDD+L+TG
Sbjct: 1090 APRAWYQELRSYLLTQGFVNSIADTSLFTLRHKRTILYVLVYVDDMLITG 1139
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 85.1 bits (209), Expect(3) = 5e-32
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L+ +F LK +GD+HY LG+EV K ++ Q KY +LL ++ M +C STP+
Sbjct: 1149 LLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKYACDLLRRVNMFDCKPVSTPLS 1208
Query: 222 TVPKVTRLEGHMFD--NPSLYRSVVGILQYMTLTRPDI 115
T K++ EG + + + YRSVVG LQY+TLTRPDI
Sbjct: 1209 TSEKLSAHEGDLLGPLDATNYRSVVGALQYLTLTRPDI 1246
Score = 52.8 bits (125), Expect(3) = 5e-32
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQ 6
+ + VNK+ QF+ APTT+HWAA KR+LRYL+ LGL+
Sbjct: 1246 IAFPVNKVCQFLHAPTTVHWAAVKRILRYLKQCTKLGLK 1284
Score = 46.6 bits (109), Expect(3) = 5e-32
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQDEVLHMK 404
APRA Y+ L + +LG S D SLF G++ +LIYVDDI++T Q+ V +
Sbjct: 1091 APRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSALL 1150
Query: 403 YD 398
D
Sbjct: 1151 QD 1152
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 88.6 bits (218), Expect(3) = 6e-32
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L +F LK +GD+HY LG+EV K +G ++ Q+KY ++L+++ M C STP+
Sbjct: 1150 LLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCTPVSTPLS 1209
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
K+T EG ++ + YRS+VG LQY+TLTRPDI
Sbjct: 1210 VSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDI 1247
Score = 50.8 bits (120), Expect(3) = 6e-32
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ YSVNK+ QF+ APTT HW A KR+LRYL S GL
Sbjct: 1247 IAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSPGL 1284
Score = 44.7 bits (104), Expect(3) = 6e-32
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQ 425
APRA Y+ L + ELG S +D SLF G++ +L+YVDDI++ ++
Sbjct: 1092 APRAWYSRLSKKLTELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTE 1144
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 86.7 bits (213), Expect(3) = 1e-31
Identities = 41/92 (44%), Positives = 58/92 (63%)
Frame = -3
Query: 390 LQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMVTVPK 211
L ++F LK +G++ Y LG+E +T G + QK+Y+ +LLEK ML + TPM PK
Sbjct: 1156 LAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPK 1215
Query: 210 VTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
++ G D PS YR+V+G LQY+ TRPDI
Sbjct: 1216 LSLTSGKPLDKPSEYRAVLGSLQYLLFTRPDI 1247
Score = 52.4 bits (124), Expect(3) = 1e-31
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ Y+VN+LSQ++ PT LHW A KR+LRYL GT S G+
Sbjct: 1247 IAYAVNRLSQYMHCPTDLHWQAAKRILRYLAGTPSHGI 1284
Score = 44.3 bits (103), Expect(3) = 1e-31
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTG 434
APRA Y L++Y++ G S +D SLF + + +L+YVDD+L+TG
Sbjct: 1094 APRAWYQELRSYLLTQGFVNSVADTSLFTLRHERTILYVLVYVDDMLITG 1143
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 86.7 bits (213), Expect(3) = 1e-31
Identities = 41/92 (44%), Positives = 58/92 (63%)
Frame = -3
Query: 390 LQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMVTVPK 211
L ++F LK +G++ Y LG+E +T G + QK+Y+ +LLEK ML + TPM PK
Sbjct: 1156 LAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPK 1215
Query: 210 VTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
++ G D PS YR+V+G LQY+ TRPDI
Sbjct: 1216 LSLTSGKPLDKPSEYRAVLGSLQYLLFTRPDI 1247
Score = 52.4 bits (124), Expect(3) = 1e-31
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ Y+VN+LSQ++ PT LHW A KR+LRYL GT S G+
Sbjct: 1247 IAYAVNRLSQYMHCPTDLHWQAAKRILRYLAGTPSHGI 1284
Score = 44.3 bits (103), Expect(3) = 1e-31
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTG 434
APRA Y L++Y++ G S +D SLF + + +L+YVDD+L+TG
Sbjct: 1094 APRAWYQELRSYLLTQGFVNSVADTSLFTLRHERTILYVLVYVDDMLITG 1143
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 86.7 bits (213), Expect(3) = 1e-31
Identities = 41/92 (44%), Positives = 58/92 (63%)
Frame = -3
Query: 390 LQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMVTVPK 211
L ++F LK +G++ Y LG+E +T G + QK+Y+ +LLEK ML + TPM PK
Sbjct: 1156 LAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPK 1215
Query: 210 VTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
++ G D PS YR+V+G LQY+ TRPDI
Sbjct: 1216 LSLTSGKPLDKPSEYRAVLGSLQYLLFTRPDI 1247
Score = 52.4 bits (124), Expect(3) = 1e-31
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGL 9
+ Y+VN+LSQ++ PT LHW A KR+LRYL GT S G+
Sbjct: 1247 IAYAVNRLSQYMHCPTDLHWQAAKRILRYLAGTPSHGI 1284
Score = 44.3 bits (103), Expect(3) = 1e-31
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTG 434
APRA Y L++Y++ G S +D SLF + + +L+YVDD+L+TG
Sbjct: 1094 APRAWYQELRSYLLTQGFVNSVADTSLFTLRHERTILYVLVYVDDMLITG 1143
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 84.0 bits (206), Expect(3) = 1e-31
Identities = 38/98 (38%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Frame = -3
Query: 402 MIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPMV 223
+++ L +F LK +G +HY LG+EV + ++G ++ Q+KY ++L+++ M +C +TP+
Sbjct: 1132 LLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLS 1191
Query: 222 TVPKVTRLEGHMF--DNPSLYRSVVGILQYMTLTRPDI 115
K++ EG+ F ++ + YRS+VG LQY+TLTRPD+
Sbjct: 1192 ISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDL 1229
Score = 57.0 bits (136), Expect(3) = 1e-31
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 122 LIYSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQ 6
L +SVNK+ Q++ APTT HWAA KR+LRYL+ TV LGL+
Sbjct: 1229 LSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLK 1267
Score = 42.4 bits (98), Expect(3) = 1e-31
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLFHRTVKGVLTVILIYVDDILLTGDSQD 422
APRA Y+ L + ELG S SD SLF + V +L+YVDDI++ S D
Sbjct: 1074 APRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVAMFMLVYVDDIIVASSSID 1127
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 84.0 bits (206), Expect(3) = 2e-31
Identities = 43/97 (44%), Positives = 62/97 (63%)
Frame = -3
Query: 405 NMIELLQSKFKLKCIGDVHYLLGLEVVKTDHGFMVCQKKYIQELLEKIKMLECNVCSTPM 226
+ I L S F L+ +G V+Y LG+EVV++ F + Q KY Q+LL + ML+ +TP
Sbjct: 921 SFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPG 980
Query: 225 VTVPKVTRLEGHMFDNPSLYRSVVGILQYMTLTRPDI 115
+ ++ L+G F + +LYRS VG LQY+TLTRPDI
Sbjct: 981 LLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDI 1017
Score = 53.5 bits (127), Expect(3) = 2e-31
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = -1
Query: 116 YSVNKLSQFIQAPTTLHWAACKRLLRYLRGTVSLGLQ 6
++VNK QF+ PTT HW A KR+LRYL+GT+S G+Q
Sbjct: 1019 FAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQ 1055
Score = 45.1 bits (105), Expect(3) = 2e-31
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -2
Query: 583 APRA*YNTLKNYIVELGL*RSTSDFSLF-HRTVKGVLTVILIYVDDILLTGDSQDEV 416
APRA YN L ++ G S +D S+F H + VL ++LIYVDDIL+TG S +V
Sbjct: 864 APRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVL-ILLIYVDDILVTGSSSAQV 919