BLASTX nr result

ID: Mentha26_contig00039529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00039529
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like is...    60   2e-07
ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like is...    60   2e-07
ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [S...    60   3e-07

>ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like isoform X2 [Solanum
           tuberosum]
          Length = 332

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = -3

Query: 166 SSPESEIFCLLPQKMDWWEGADETRVLIAQDPSTSEKNQGSILSLRHPRTGNTAC 2
           SSP     C+    M WWEG DE RVLIA++PS        +LSLRHP++GN  C
Sbjct: 41  SSPPRGFSCVRKVSMAWWEGLDEARVLIAKEPSKDGDKVEQLLSLRHPKSGNATC 95


>ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like isoform X1 [Solanum
           tuberosum]
          Length = 333

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = -3

Query: 166 SSPESEIFCLLPQKMDWWEGADETRVLIAQDPSTSEKNQGSILSLRHPRTGNTAC 2
           SSP     C+    M WWEG DE RVLIA++PS        +LSLRHP++GN  C
Sbjct: 41  SSPPRGFSCVRKVSMAWWEGLDEARVLIAKEPSKDGDKVEQLLSLRHPKSGNATC 95


>ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [Solanum lycopersicum]
          Length = 333

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 32/54 (59%)
 Frame = -3

Query: 163 SPESEIFCLLPQKMDWWEGADETRVLIAQDPSTSEKNQGSILSLRHPRTGNTAC 2
           SP     C+    M WWEG DE RVLIA++PS        +LSLRHP++GN  C
Sbjct: 42  SPPRGFSCVRKSSMAWWEGLDEARVLIAKEPSKDGNKVEQLLSLRHPKSGNATC 95


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