BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00039504
         (779 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus...   347   4e-93
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   327   2e-87
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   325   1e-86
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   299   7e-79
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   299   7e-79
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   298   1e-78
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   298   1e-78
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   291   1e-76
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              291   1e-76
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   287   3e-75
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   287   3e-75
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   287   3e-75
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   284   2e-74
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   281   2e-73
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   280   3e-73
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   277   3e-72
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   277   3e-72
ref|XP_002298071.2| hypothetical protein POPTR_0001s08650g [Popu...   275   1e-71
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   274   3e-71
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   274   3e-71

>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
          Length = 1379

 Score =  347 bits (889), Expect = 4e-93
 Identities = 161/259 (62%), Positives = 208/259 (80%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            AYKY   +N+FIAM+KAGSKGNL KL Q S+C+GLQH+LAP+SF++PR L+CASWN+QK 
Sbjct: 648  AYKYPSKNNSFIAMLKAGSKGNLAKLFQQSLCLGLQHTLAPVSFSIPRDLTCASWNYQKG 707

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
               V   +    V +S+IPC +++ SF AGLNPLE F+LSLT RD SF G+AD+ GT+ R
Sbjct: 708  NSGVHNFNGYPEVSESYIPCALVSSSFLAGLNPLENFVLSLTARDSSFSGHADVSGTITR 767

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHAEVSMGGHPVGSIAACAITEA 238
            R+M+F+RD++IGYDGTVRS YGNQV+QF+Y ++E+ A  ++ ++GGHPVG++AACAI+EA
Sbjct: 768  RIMYFMRDIIIGYDGTVRSSYGNQVVQFNYCTKEMSAADSDAAVGGHPVGALAACAISEA 827

Query: 237  LYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGALEVM 58
             YSALDQP+S LEPSP+LA+KKILECGVKK+TGYK           RWT+G EYGA EV 
Sbjct: 828  AYSALDQPVSALEPSPLLAMKKILECGVKKNTGYKSASLFLSRALGRWTDGLEYGAKEVK 887

Query: 57   NHLECLPFSNIVSETRICY 1
            +HLEC+ FS++VSETRICY
Sbjct: 888  SHLECIVFSDVVSETRICY 906


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  327 bits (839), Expect = 2e-87
 Identities = 152/258 (58%), Positives = 200/258 (77%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y Y+G+ N+ +AM+KAGSKGNLQKL QHSMC+GLQHSL P+SF++P +LSCASWN+QKN 
Sbjct: 393  YHYAGDTNSLLAMLKAGSKGNLQKLFQHSMCLGLQHSLTPVSFSMPHYLSCASWNNQKNH 452

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
              +        + DS+IPCT+++ S+  GLNPLE F+ SLTTRD SF G AD+ GTL R+
Sbjct: 453  LSLYRLDGTREILDSYIPCTVVSSSYLMGLNPLESFLHSLTTRDSSFSGQADVSGTLTRK 512

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHAEVSMGGHPVGSIAACAITEAL 235
            LMFF+RD++ GYDGTVR+ YG+Q++QF YG+ ++ A +++V MGGHPVGS+AACAI+EA 
Sbjct: 513  LMFFMRDIITGYDGTVRNSYGSQIVQFDYGTGDMSAVNSDVLMGGHPVGSLAACAISEAA 572

Query: 234  YSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGALEVMN 55
            YSALDQP+S LEPSP++ALKK+L+CGVK +TG K           +W NGFE+GALEV +
Sbjct: 573  YSALDQPVSALEPSPLIALKKVLDCGVKNNTGGKSASLFLSRRLGKWVNGFEFGALEVKD 632

Query: 54   HLECLPFSNIVSETRICY 1
            H+E L FS +VSE  I +
Sbjct: 633  HMESLLFSEVVSEVTISF 650


>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  325 bits (832), Expect = 1e-86
 Identities = 159/257 (61%), Positives = 200/257 (77%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y+Y+ N N+FI+M+K+GSKGNLQK VQHSMCVGLQHSLAPLSF+V   L+CASWN +K  
Sbjct: 677  YRYASNENSFISMLKSGSKGNLQKFVQHSMCVGLQHSLAPLSFSVADQLTCASWNKEKCY 736

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
             D+  S    +V DS+I C+++  SF  GLNP++CF  SLT+RD SF G+AD+ GT+ RR
Sbjct: 737  SDIPKS----VVSDSYIVCSIVKNSFLEGLNPIQCFTHSLTSRDSSFSGHADVSGTICRR 792

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHAEVSMGGHPVGSIAACAITEAL 235
            LM+F+RDL+IGYDGTVR+CYGNQV+QF+Y S +++    + +MGGHPVGS+A CAI+EA 
Sbjct: 793  LMYFMRDLIIGYDGTVRNCYGNQVVQFNYFSGDVNK---DAAMGGHPVGSLAGCAISEAA 849

Query: 234  YSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGALEVMN 55
            YSALD PIS LEPSP+LALK++LECGVK+ST  K           RW +GFEYGALEV N
Sbjct: 850  YSALDLPISALEPSPLLALKEVLECGVKRSTRCKTASLFLSKGLRRWAHGFEYGALEVKN 909

Query: 54   HLECLPFSNIVSETRIC 4
            HLE L FS+IVS+ RIC
Sbjct: 910  HLERLCFSDIVSDVRIC 926


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  299 bits (766), Expect = 7e-79
 Identities = 151/267 (56%), Positives = 188/267 (70%), Gaps = 9/267 (3%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y Y+ N N+ +AM+KAGSKGNL KLVQHSMC+GLQ SL P+SF +PR LSC +WN+ K+ 
Sbjct: 489  YNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSH 548

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
              +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+ GTLNR+
Sbjct: 549  LVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRK 608

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSEEIDATHA--------EVSMGGHPVGSI 262
            LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +E+I +T            ++GGHPVGS+
Sbjct: 609  LMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTKGTGDALESHNHAIGGHPVGSL 668

Query: 261  AACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGF 82
            AACAI+EA YSALDQP+S LE SP+L LKKILE G    +G K           RW +GF
Sbjct: 669  AACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGF 728

Query: 81   EYGALEVMNHLECLPFSNIVSETRICY 1
            EYGALEV  HLE L  S +VS   IC+
Sbjct: 729  EYGALEVKGHLERLLLSEVVSTVMICF 755


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  299 bits (766), Expect = 7e-79
 Identities = 151/267 (56%), Positives = 188/267 (70%), Gaps = 9/267 (3%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y Y+ N N+ +AM+KAGSKGNL KLVQHSMC+GLQ SL P+SF +PR LSC +WN+ K+ 
Sbjct: 702  YNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSH 761

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
              +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+ GTLNR+
Sbjct: 762  LVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRK 821

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSEEIDATHA--------EVSMGGHPVGSI 262
            LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +E+I +T            ++GGHPVGS+
Sbjct: 822  LMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEKIASTKGTGDALESHNHAIGGHPVGSL 881

Query: 261  AACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGF 82
            AACAI+EA YSALDQP+S LE SP+L LKKILE G    +G K           RW +GF
Sbjct: 882  AACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGF 941

Query: 81   EYGALEVMNHLECLPFSNIVSETRICY 1
            EYGALEV  HLE L  S +VS   IC+
Sbjct: 942  EYGALEVKGHLERLLLSEVVSTVMICF 968


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  298 bits (763), Expect = 1e-78
 Identities = 150/267 (56%), Positives = 187/267 (70%), Gaps = 9/267 (3%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y Y+ N N+ +AM+KAGSKGNL KLVQH+MC+GLQ SL P+SF +PR LSC +WN+ K+ 
Sbjct: 702  YNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSH 761

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
              +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+ GTLNR+
Sbjct: 762  LVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRK 821

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSEEIDATHA--------EVSMGGHPVGSI 262
            LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +E+I +T            ++GGHPVGS+
Sbjct: 822  LMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIGGHPVGSL 881

Query: 261  AACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGF 82
            AACAI+EA Y ALDQP+S LE SP+L LKKILE G    TG K           RW +GF
Sbjct: 882  AACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGF 941

Query: 81   EYGALEVMNHLECLPFSNIVSETRICY 1
            EYGALEV  HLE L  S +VS   IC+
Sbjct: 942  EYGALEVKGHLERLLLSEVVSTVMICF 968


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  298 bits (763), Expect = 1e-78
 Identities = 150/267 (56%), Positives = 187/267 (70%), Gaps = 9/267 (3%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y Y+ N N+ +AM+KAGSKGNL KLVQH+MC+GLQ SL P+SF +PR LSC +WN+ K+ 
Sbjct: 394  YNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVPVSFRMPRQLSCDAWNNHKSH 453

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
              +E  H     P S+IP  ++  SF AGLNPLECF+ SLTTRD SF G+AD+ GTLNR+
Sbjct: 454  LVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRK 513

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQF-HYGSEEIDATHA--------EVSMGGHPVGSI 262
            LMFF+RDL +GYDGTVR+ YGNQ++QF +Y +E+I +T            ++GGHPVGS+
Sbjct: 514  LMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAEQIASTKVTGEALESHNHAIGGHPVGSL 573

Query: 261  AACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGF 82
            AACAI+EA Y ALDQP+S LE SP+L LKKILE G    TG K           RW +GF
Sbjct: 574  AACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGEKTASMFLSKRLGRWAHGF 633

Query: 81   EYGALEVMNHLECLPFSNIVSETRICY 1
            EYGALEV  HLE L  S +VS   IC+
Sbjct: 634  EYGALEVKGHLERLLLSEVVSTVMICF 660


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  291 bits (746), Expect = 1e-76
 Identities = 149/265 (56%), Positives = 188/265 (70%), Gaps = 7/265 (2%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y+Y+   N+ +AM+KAGSKGNL KLVQ  +C+GLQHSL PLSF +P  LSCA+WN QK +
Sbjct: 749  YQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQK-V 807

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
            P + I +D     +S+IP  ++  SF  GLNPLECF+ S+T+RD SF  NAD+PGTL RR
Sbjct: 808  PGL-IQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRR 866

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQFHYG-------SEEIDATHAEVSMGGHPVGSIAA 256
            LMFF+RDL I YDGTVR+ YGNQ++QF Y        S+ I+       MGG PVGSI+A
Sbjct: 867  LMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQPVGSISA 926

Query: 255  CAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEY 76
            CAI+EA YSALDQPIS+LEPSP+L LK++LECG++KST  +           +  +GFEY
Sbjct: 927  CAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEY 986

Query: 75   GALEVMNHLECLPFSNIVSETRICY 1
            GALEV NHLE L FS+IVS   I +
Sbjct: 987  GALEVKNHLEKLLFSDIVSTVMIVF 1011


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  291 bits (746), Expect = 1e-76
 Identities = 149/265 (56%), Positives = 188/265 (70%), Gaps = 7/265 (2%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            Y+Y+   N+ +AM+KAGSKGNL KLVQ  +C+GLQHSL PLSF +P  LSCA+WN QK +
Sbjct: 618  YQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQK-V 676

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
            P + I +D     +S+IP  ++  SF  GLNPLECF+ S+T+RD SF  NAD+PGTL RR
Sbjct: 677  PGL-IQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRR 735

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQFHYG-------SEEIDATHAEVSMGGHPVGSIAA 256
            LMFF+RDL I YDGTVR+ YGNQ++QF Y        S+ I+       MGG PVGSI+A
Sbjct: 736  LMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGINEDTCAYDMGGQPVGSISA 795

Query: 255  CAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEY 76
            CAI+EA YSALDQPIS+LEPSP+L LK++LECG++KST  +           +  +GFEY
Sbjct: 796  CAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEY 855

Query: 75   GALEVMNHLECLPFSNIVSETRICY 1
            GALEV NHLE L FS+IVS   I +
Sbjct: 856  GALEVKNHLEKLLFSDIVSTVMIVF 880


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  287 bits (735), Expect = 3e-75
 Identities = 148/259 (57%), Positives = 178/259 (68%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            AYKY    N+ +AM KAGSKGNL KLVQHS+C+GLQHSLAPLSF  P  LSCA+WN  + 
Sbjct: 714  AYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRA 773

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
              + E +        S+IP  ++A SF  GLNPLECFI S+T+RD SF  NAD+PGTL R
Sbjct: 774  GDNTECAK-------SYIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTR 826

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHAEVSMGGHPVGSIAACAITEA 238
            RLMFF+RDL   YDGTVR+ YGNQ++QF Y  E       E+  GG  VGS++ACAI+EA
Sbjct: 827  RLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEI--GGQSVGSLSACAISEA 884

Query: 237  LYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGALEVM 58
             YSALDQPIS+LE SP+L LK +LECG KKS   +           +  +GFEYGALEV 
Sbjct: 885  AYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVK 944

Query: 57   NHLECLPFSNIVSETRICY 1
            NHLECL  S+IVS + I Y
Sbjct: 945  NHLECLMLSDIVSTSMIIY 963


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  287 bits (735), Expect = 3e-75
 Identities = 148/259 (57%), Positives = 178/259 (68%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            AYKY    N+ +AM KAGSKGNL KLVQHS+C+GLQHSLAPLSF  P  LSCA+WN  + 
Sbjct: 752  AYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRA 811

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
              + E +        S+IP  ++A SF  GLNPLECFI S+T+RD SF  NAD+PGTL R
Sbjct: 812  GDNTECAK-------SYIPSAVVANSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTR 864

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHAEVSMGGHPVGSIAACAITEA 238
            RLMFF+RDL   YDGTVR+ YGNQ++QF Y  E       E+  GG  VGS++ACAI+EA
Sbjct: 865  RLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEI--GGQSVGSLSACAISEA 922

Query: 237  LYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGALEVM 58
             YSALDQPIS+LE SP+L LK +LECG KKS   +           +  +GFEYGALEV 
Sbjct: 923  AYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVK 982

Query: 57   NHLECLPFSNIVSETRICY 1
            NHLECL  S+IVS + I Y
Sbjct: 983  NHLECLMLSDIVSTSMIIY 1001


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  287 bits (734), Expect = 3e-75
 Identities = 146/269 (54%), Positives = 187/269 (69%), Gaps = 10/269 (3%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A+KY+G  N+ + M+KAGSKGNLQKLVQHSMC+GLQHSL PLSF +P  LSCA+WN+QK 
Sbjct: 615  AHKYAGKDNSLLTMLKAGSKGNLQKLVQHSMCLGLQHSLIPLSFRIPNQLSCAAWNNQKA 674

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
               ++         +S+IP  ++  SF  GLNPLECF+ S+T+RD SF GNAD+PGTL R
Sbjct: 675  CSLIQKVEGTYECVESYIPSAVVKSSFLTGLNPLECFVHSVTSRDSSFSGNADLPGTLTR 734

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYG-----SEEIDATHAEVS-----MGGHPVG 268
            +LMF +RDL   YDGTVR+ YGNQ++QF Y      S+    +HA+ +     +GG PVG
Sbjct: 735  KLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDIDMDKSDSTSTSHAKSTTACDGIGGQPVG 794

Query: 267  SIAACAITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTN 88
            S++ACA++EA YSALDQP+S+LE SP+L LK ILECG KKS+  +           R  +
Sbjct: 795  SLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSKKSSAKQTLSLFLSKKLGRRRH 854

Query: 87   GFEYGALEVMNHLECLPFSNIVSETRICY 1
            GFEYGALEV NHL  L FS+IVS   I +
Sbjct: 855  GFEYGALEVKNHLVGLTFSDIVSTVMIIF 883


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  284 bits (727), Expect = 2e-74
 Identities = 146/259 (56%), Positives = 176/259 (67%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            AYKY    N+ + M KAGSKGNL KLVQHS+C+GLQHSLAPLSF  P  LSCA+WN  + 
Sbjct: 714  AYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRA 773

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
              + E +        S+IP  ++  SF  GLNPLECFI S+T+RD SF  NAD+PGTL R
Sbjct: 774  GDNTECAK-------SYIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTR 826

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHAEVSMGGHPVGSIAACAITEA 238
            RLMFF+RDL   YDGTVR+ YGNQ++QF Y  E       E+  G  PVGS++ACAI+EA
Sbjct: 827  RLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEI--GDQPVGSLSACAISEA 884

Query: 237  LYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGALEVM 58
             YSALDQPIS+LE SP+L LK +LECG KKS   +           +  +GFEYGALEV 
Sbjct: 885  AYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVK 944

Query: 57   NHLECLPFSNIVSETRICY 1
            NHLECL  S+IVS + I Y
Sbjct: 945  NHLECLMLSDIVSTSMIIY 963


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  281 bits (718), Expect = 2e-73
 Identities = 145/262 (55%), Positives = 180/262 (68%), Gaps = 3/262 (1%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A K++   N+F+AM KAGSKGNL KLVQHSMC+GLQHSL  LS+ +PR LSCA WN QK 
Sbjct: 879  ADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLSYRIPRELSCAGWNSQKG 938

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
            L  +E+S D      S+I   ++  SF  GLNPLECF+ S+T RD SF  NAD+PGTL R
Sbjct: 939  LHSMEMSSDTLEPKQSYIAHAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTR 998

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEE---IDATHAEVSMGGHPVGSIAACAI 247
            RLMFF+RD+   YDGTVR+ YGNQ+IQF Y +EE    D+   E  +GG PVG+++ACA+
Sbjct: 999  RLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSYFREDIIGGEPVGALSACAV 1058

Query: 246  TEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGAL 67
            +EA YSAL QPIS+LE SP+L LK +LECG +K  G +           +  NGFEY AL
Sbjct: 1059 SEAAYSALSQPISLLEASPLLNLKNVLECGSRKKGGDQTVSLFLSEKIGKQRNGFEYAAL 1118

Query: 66   EVMNHLECLPFSNIVSETRICY 1
            EV N+LE   FSNIVS   I +
Sbjct: 1119 EVKNYLERYMFSNIVSTVMIIF 1140


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  280 bits (717), Expect = 3e-73
 Identities = 146/262 (55%), Positives = 182/262 (69%), Gaps = 3/262 (1%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A KY+   NAF+AM KAGSKGNL KLVQHSMC+G+Q+SL  LS+ +PRHLSCA+WN QK 
Sbjct: 627  ADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCAAWNSQKW 686

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
            L  +++S        S+IP  ++  SF  GLNPLECF+ S+T RD SF  +AD+PGTL R
Sbjct: 687  LDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTR 746

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEE---IDATHAEVSMGGHPVGSIAACAI 247
            RLMFF+RDL   YDGTVR+ YGNQ+IQF Y  EE    D    E ++GG PVG+I+ACAI
Sbjct: 747  RLMFFMRDLHDAYDGTVRNLYGNQLIQFSYDIEEDSSCDKGFQEYAIGGEPVGAISACAI 806

Query: 246  TEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGAL 67
            +EA YSAL QP+S+LE SP+L LK +LECG +K  G +           +  +GFEY AL
Sbjct: 807  SEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAAL 866

Query: 66   EVMNHLECLPFSNIVSETRICY 1
            EV N+LE L FSNIVS   I +
Sbjct: 867  EVKNYLERLLFSNIVSTVMIIF 888


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  277 bits (709), Expect = 3e-72
 Identities = 145/262 (55%), Positives = 181/262 (69%), Gaps = 3/262 (1%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A KY+   NAF+AM KAGSKGNL KLVQHSMC+GLQHSL  L + +PR LSCA+WN QK 
Sbjct: 722  ADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLSCAAWNSQKG 781

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
            +   +I  D      S+IP  ++  SF  GLNPLECF+ S+T RD SF  NAD+PGTL R
Sbjct: 782  M---QIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTR 838

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEE---IDATHAEVSMGGHPVGSIAACAI 247
            RLMFF+RD+   YDGTVR+ YGNQ+IQF Y +EE    D+   E ++GG PVG+++ACA+
Sbjct: 839  RLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSHFREDTIGGEPVGTLSACAV 898

Query: 246  TEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGAL 67
            +EA YSAL QPIS+LE SP+L LK +LECG +K  G +           +  NGFEY AL
Sbjct: 899  SEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQRNGFEYAAL 958

Query: 66   EVMNHLECLPFSNIVSETRICY 1
            EV N+LE L FS+IVS   I +
Sbjct: 959  EVKNYLERLMFSDIVSTVMIIF 980


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  277 bits (709), Expect = 3e-72
 Identities = 145/262 (55%), Positives = 181/262 (69%), Gaps = 3/262 (1%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A KY+   NAF+AM KAGSKGNL KLVQHSMC+GLQHSL  L + +PR LSCA+WN QK 
Sbjct: 722  ADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLVRLPYKIPRKLSCAAWNSQKG 781

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
            +   +I  D      S+IP  ++  SF  GLNPLECF+ S+T RD SF  NAD+PGTL R
Sbjct: 782  M---QIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDNADLPGTLTR 838

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEE---IDATHAEVSMGGHPVGSIAACAI 247
            RLMFF+RD+   YDGTVR+ YGNQ+IQF Y +EE    D+   E ++GG PVG+++ACA+
Sbjct: 839  RLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDSHFREDTIGGEPVGTLSACAV 898

Query: 246  TEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGAL 67
            +EA YSAL QPIS+LE SP+L LK +LECG +K  G +           +  NGFEY AL
Sbjct: 899  SEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSEKIGKQRNGFEYAAL 958

Query: 66   EVMNHLECLPFSNIVSETRICY 1
            EV N+LE L FS+IVS   I +
Sbjct: 959  EVKNYLERLMFSDIVSTVMIIF 980


>ref|XP_002298071.2| hypothetical protein POPTR_0001s08650g [Populus trichocarpa]
            gi|550346847|gb|EEE82876.2| hypothetical protein
            POPTR_0001s08650g [Populus trichocarpa]
          Length = 1109

 Score =  275 bits (704), Expect = 1e-71
 Identities = 143/262 (54%), Positives = 185/262 (70%), Gaps = 6/262 (2%)
 Frame = -3

Query: 774  YKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKNL 595
            YKY+   N+F+AM KAGSKGNL KLVQHSMC+GLQH+LA LSF +P  LSCA WN QK  
Sbjct: 524  YKYASQDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHALASLSFRIPHQLSCAGWNKQK-- 581

Query: 594  PDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNRR 415
                 + DA      +IP  ++  SF +GLNP+ECF+ S+T+RD SF  NAD+PGTL RR
Sbjct: 582  -----ADDATESAKRYIPHAVVEGSFLSGLNPIECFVHSVTSRDSSFSDNADLPGTLFRR 636

Query: 414  LMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATHA--EVS----MGGHPVGSIAAC 253
            +MFF+RDL   YDGTVR+ YGNQ++QF Y  +++D + +  E++    + G PVG +AAC
Sbjct: 637  MMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSGSVDEINNSDGIAGRPVGPLAAC 696

Query: 252  AITEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYG 73
            AI+EA YSALDQPIS+LE SP+L LK +LECG+K+++ ++           R  +GFEY 
Sbjct: 697  AISEAAYSALDQPISLLEKSPLLNLKNVLECGLKRNSAHQTMSLFLSEKLGRQRHGFEYA 756

Query: 72   ALEVMNHLECLPFSNIVSETRI 7
            ALEV NHLE L FS+IVS  RI
Sbjct: 757  ALEVQNHLERLLFSDIVSFVRI 778


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  274 bits (700), Expect = 3e-71
 Identities = 141/262 (53%), Positives = 182/262 (69%), Gaps = 3/262 (1%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A KY+   N+F+AM KAGSKGNL KLVQHSMC+G+Q+SL  LS+ +PRHLSCA WN QK 
Sbjct: 636  ADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKW 695

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
            +  +++S        S+IP  ++  SF  GLNPLECF+ S+T RD SF  +AD+PGTL R
Sbjct: 696  VDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTR 755

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATH---AEVSMGGHPVGSIAACAI 247
            RLMFF+RDL   YDGTVR+ YGNQ+IQF Y  EE  + +    + ++GG  VG+I+ACAI
Sbjct: 756  RLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKGFQQYALGGESVGAISACAI 815

Query: 246  TEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGAL 67
            +EA YSAL QP+S+LE SP+L LK +LECG +K  G +           +  +GFEY AL
Sbjct: 816  SEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAAL 875

Query: 66   EVMNHLECLPFSNIVSETRICY 1
            EV N+LE L FSNIVS+  I +
Sbjct: 876  EVKNYLERLLFSNIVSKVMIIF 897


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  274 bits (700), Expect = 3e-71
 Identities = 141/262 (53%), Positives = 182/262 (69%), Gaps = 3/262 (1%)
 Frame = -3

Query: 777  AYKYSGNHNAFIAMMKAGSKGNLQKLVQHSMCVGLQHSLAPLSFTVPRHLSCASWNHQKN 598
            A KY+   N+F+AM KAGSKGNL KLVQHSMC+G+Q+SL  LS+ +PRHLSCA WN QK 
Sbjct: 713  ADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLVRLSYRLPRHLSCADWNSQKW 772

Query: 597  LPDVEISHDAGLVPDSFIPCTMIAKSFSAGLNPLECFILSLTTRDGSFGGNADIPGTLNR 418
            +  +++S        S+IP  ++  SF  GLNPLECF+ S+T RD SF  +AD+PGTL R
Sbjct: 773  VDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHSVTNRDSSFSDHADLPGTLTR 832

Query: 417  RLMFFLRDLVIGYDGTVRSCYGNQVIQFHYGSEEIDATH---AEVSMGGHPVGSIAACAI 247
            RLMFF+RDL   YDGTVR+ YGNQ+IQF Y  EE  + +    + ++GG  VG+I+ACAI
Sbjct: 833  RLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNKGFQQYALGGESVGAISACAI 892

Query: 246  TEALYSALDQPISVLEPSPMLALKKILECGVKKSTGYKXXXXXXXXXXXRWTNGFEYGAL 67
            +EA YSAL QP+S+LE SP+L LK +LECG +K  G +           +  +GFEY AL
Sbjct: 893  SEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFLSEKLGKQRHGFEYAAL 952

Query: 66   EVMNHLECLPFSNIVSETRICY 1
            EV N+LE L FSNIVS+  I +
Sbjct: 953  EVKNYLERLLFSNIVSKVMIIF 974