BLASTX nr result
ID: Mentha26_contig00039396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha26_contig00039396 (1480 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 501 e-139 emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 474 e-131 gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 439 e-120 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 423 e-115 gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 399 e-108 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 399 e-108 gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 399 e-108 gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 394 e-107 ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 393 e-106 emb|CAB72467.1| putative protein [Arabidopsis thaliana] 390 e-106 gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 389 e-105 ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 379 e-102 gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 377 e-102 gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 369 1e-99 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 364 5e-98 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 364 5e-98 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 361 4e-97 gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 359 2e-96 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 349 2e-93 dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 347 1e-92 >emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1110 Score = 501 bits (1291), Expect = e-139 Identities = 235/455 (51%), Positives = 329/455 (72%) Frame = +1 Query: 109 EIREFYQSLMGTAAEELRMVDKNTMNRGPKLQVTQQKALVAAVTGKEVKEALFSMDSSKA 288 EI EFY+ L+GT A L VD NT+ G L +++L+ V E+ EAL + + KA Sbjct: 396 EILEFYKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKA 455 Query: 289 PGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFR 468 PG+DGFN YFFK+ W I +E+ +Q+FF+ + + +N ++TL+PK +A+ VK+FR Sbjct: 456 PGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFR 515 Query: 469 PIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQL 648 PIACCTV+YKIISK+L NR+K ++ ++++ QS F+ GR I DNI+L+ ELI+ YTRK + Sbjct: 516 PIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHM 575 Query: 649 SPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAF 828 SPRC++KVDI+KAYDSVEW FL+ +L E GFP RF+ WIM C++TVSY + VNG T+ F Sbjct: 576 SPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPF 635 Query: 829 EARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLF 1008 +ARKG+RQGDP+SP+LF +CMEYL+RCL EL + F++HPKC+R+ + HL FADDLL+F Sbjct: 636 QARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMF 695 Query: 1009 TRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFK 1188 R D +S+ + KF+ ASGL A+ KSNIYF GV +E+ + M GELPF+ Sbjct: 696 CRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFR 755 Query: 1189 YLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFI 1368 YLGVPL+SKKL+ QC+PL++ + R W +KLLSYAGR+QL+KS+L +Q YW+ IF Sbjct: 756 YLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFP 815 Query: 1369 LPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 L +K+++ ++ CR FLWTG+TE +K+A +AW I Sbjct: 816 LSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATI 850 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 474 bits (1219), Expect = e-131 Identities = 225/453 (49%), Positives = 318/453 (70%) Frame = +1 Query: 109 EIREFYQSLMGTAAEELRMVDKNTMNRGPKLQVTQQKALVAAVTGKEVKEALFSMDSSKA 288 EI FY+ L+GT++ +L +D + + G KL T LV +T +E+ +AL +D +KA Sbjct: 399 EICNFYRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKA 458 Query: 289 PGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFR 468 PG+DGFN FFK+ W +I +E+ + FF G + K +N +TLIPK D A KD+R Sbjct: 459 PGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYR 518 Query: 469 PIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQL 648 PIACC+ LYKIISKIL RL+ V+ ++ Q+ F+ R I DNI+L+ ELI+ Y R+ + Sbjct: 519 PIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHV 578 Query: 649 SPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAF 828 SPRC++KVDI+KAYDSVEW FL+ ML ELGFP FI WIM C+ TVSY I +NG + F Sbjct: 579 SPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPF 638 Query: 829 EARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLF 1008 +A+KG+RQGDP+SP+LF + MEYL+RC+ + + F++HPKC+R+ L HL FADDLL+F Sbjct: 639 DAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMF 698 Query: 1009 TRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFK 1188 R D +SI ++++ + F+ ASGL+A+ KS IYFGGV +++ + M G LPF+ Sbjct: 699 ARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFR 758 Query: 1189 YLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFI 1368 YLGVPL+SKKL+ QC+PLI K+ R W + LLSYAGR+QL+K++L+ +Q YW QIF Sbjct: 759 YLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFP 818 Query: 1369 LPQKILKLIQSACRTFLWTGRTEVSKRALIAWE 1467 LP+K++K +++ CR FLWTG + S +A +AW+ Sbjct: 819 LPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWD 851 >gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 402 Score = 439 bits (1128), Expect = e-120 Identities = 202/322 (62%), Positives = 258/322 (80%) Frame = +1 Query: 109 EIREFYQSLMGTAAEELRMVDKNTMNRGPKLQVTQQKALVAAVTGKEVKEALFSMDSSKA 288 EIR FY LMG++ + L MVDKN + RGP L QQ L + T EVK LFSMDSSKA Sbjct: 79 EIRGFYLKLMGSSVDSLPMVDKNVVKRGPMLSQHQQDLLCSKFTAVEVKNVLFSMDSSKA 138 Query: 289 PGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFR 468 PGIDG+NV+FFK W+IIG+ VI A+ FF G +PK +N +TL+PK N ++VK+FR Sbjct: 139 PGIDGYNVHFFKCSWNIIGDSVIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFR 198 Query: 469 PIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQL 648 PIACC+V+YKIISKIL +R++ VL++++S+NQSAFVKGR+IFDNIILSHEL+KSY+RK + Sbjct: 199 PIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGI 258 Query: 649 SPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAF 828 SPRCMVK+D+QKAY+SVEWPF+K +++ELGF ++F+NW+M CLTT SY N+NGDLT F Sbjct: 259 SPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPF 318 Query: 829 EARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLF 1008 A+KG+RQGDPISPYLFVICMEYLN CL++L N F +HP+CKR+ LIH+CF DDLLLF Sbjct: 319 AAKKGLRQGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLF 378 Query: 1009 TRGDINSIQQLLSVLDKFAAAS 1074 +RGD++S+ QL F+AAS Sbjct: 379 SRGDVDSVSQLFEAFSLFSAAS 400 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 423 bits (1087), Expect = e-115 Identities = 199/420 (47%), Positives = 287/420 (68%) Frame = +1 Query: 214 QKALVAAVTGKEVKEALFSMDSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDL 393 Q++L+ VT +E+++ LF M S K+PG DG+ FFK W IIG+E AVQ FF+ G L Sbjct: 446 QQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFL 505 Query: 394 PKEVNVALITLIPKCDNASAVKDFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSAF 573 PK +N ++ LIPK A +KD+RPI+CC VLYK+ISKI+ANRLK+VL I+ NQSAF Sbjct: 506 PKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAF 565 Query: 574 VKGRLIFDNIILSHELIKSYTRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRF 753 VK RL+ +N++L+ EL+K Y + +S RC +K+DI KA+DSV+WPFL + LGFP F Sbjct: 566 VKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREF 625 Query: 754 INWIMTCLTTVSYVINVNGDLTEAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDNR 933 I+WI C+TT S+ + VNG+L F++ +G+RQG +SPYLFVICM+ L++ L + R Sbjct: 626 IHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAAR 685 Query: 934 LFHYHPKCKRVGLIHLCFADDLLLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYF 1113 F YHPKCK +GL HL FADDL++ + G I SI++++ V D+FA SGL+ + KS +Y Sbjct: 686 HFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYL 745 Query: 1114 GGVGAHLKQEILELSGMCEGELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLL 1293 G+ A + E+ + G+LP +YLG+PL +K+LS C PL++++ +RI W S+ L Sbjct: 746 AGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFL 805 Query: 1294 SYAGRVQLMKSVLFGIQVYWSQIFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 SYAGR+ L+ SVL+ I +W F LP+K ++ ++ C FLW+G S +A I+W + Sbjct: 806 SYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMV 865 >gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1529 Score = 399 bits (1026), Expect = e-108 Identities = 197/445 (44%), Positives = 288/445 (64%) Frame = +1 Query: 139 GTAAEELRMVDKNTMNRGPKLQVTQQKALVAAVTGKEVKEALFSMDSSKAPGIDGFNVYF 318 G + E+LR N M+ + VT Q L VTG+E+++ LF+M ++K+PG DG+ F Sbjct: 724 GISVEDLR----NLMSY--RCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEF 777 Query: 319 FKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRPIACCTVLYK 498 FK W + G + I A+Q FF G LPK +N ++ LIPK D A +KD+RPI+CC VLYK Sbjct: 778 FKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYK 837 Query: 499 IISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLSPRCMVKVDI 678 +ISKILANRLK++L + I NQSAFVK RL+ +N++L+ EL+K Y ++ ++PRC +K+DI Sbjct: 838 VISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDI 897 Query: 679 QKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFEARKGIRQGD 858 KA+DSV+W FL L L FP F +WI C++T ++ + VNG+L F + +G+RQG Sbjct: 898 SKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGC 957 Query: 859 PISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTRGDINSIQQ 1038 +SPYLFVICM L+ + E +R YHPKC+++GL HLCFADDL++F G SI+ Sbjct: 958 ALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEG 1017 Query: 1039 LLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFKYLGVPLSSKK 1218 +++V +FA SGL+ + KS IY GV A + + L G+LP +YLG+PL +K+ Sbjct: 1018 VINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQ 1077 Query: 1219 LSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFILPQKILKLIQ 1398 ++ PLI+ + +I+ W ++ LSYAGR+ L+ SV+ I +W + LP ++ I+ Sbjct: 1078 MTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIE 1137 Query: 1399 SACRTFLWTGRTEVSKRALIAWEKI 1473 C FLW+G K+A IAW I Sbjct: 1138 KLCSAFLWSGPVLNPKKAKIAWSSI 1162 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 399 bits (1024), Expect = e-108 Identities = 194/419 (46%), Positives = 275/419 (65%) Frame = +1 Query: 217 KALVAAVTGKEVKEALFSMDSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLP 396 + L VTG+E+K+ +FSM K+PG DG+ F+K W IIG+EVI A+Q FF+ G LP Sbjct: 168 RLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLP 227 Query: 397 KEVNVALITLIPKCDNASAVKDFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSAFV 576 K VN ++ LIPK A +KD+RPI+CC VLYK ISKILANRLK +L I NQSAFV Sbjct: 228 KGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFV 287 Query: 577 KGRLIFDNIILSHELIKSYTRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFI 756 K RL+ +N++L+ EL+K Y + +S RC +K+DI KA+DS++W FL +L + FP FI Sbjct: 288 KDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFI 347 Query: 757 NWIMTCLTTVSYVINVNGDLTEAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRL 936 +WI C++T S+ I VNG+L F + +G+RQG +SPYLFVI M+ L+R L + R Sbjct: 348 HWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGARE 407 Query: 937 FHYHPKCKRVGLIHLCFADDLLLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFG 1116 F YHP+CK +GL HLCFADDL++ T G I S+ ++ VL++FAA GLK K+ +Y Sbjct: 408 FGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLA 467 Query: 1117 GVGAHLKQEILELSGMCEGELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLS 1296 GV H +Q + G+LP +YLG+PL +K+L+ PLI ++ +RI W S+ LS Sbjct: 468 GVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLS 527 Query: 1297 YAGRVQLMKSVLFGIQVYWSQIFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 +AGR+ L+ SVL+ I +W F LP++ + I LW+G K+A ++W++I Sbjct: 528 FAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEI 586 >gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score: 72.31) [Arabidopsis thaliana] Length = 928 Score = 399 bits (1024), Expect = e-108 Identities = 201/461 (43%), Positives = 292/461 (63%), Gaps = 4/461 (0%) Frame = +1 Query: 103 EMEIREFYQSLM----GTAAEELRMVDKNTMNRGPKLQVTQQKALVAAVTGKEVKEALFS 270 E REF Q + G A EEL+ + + K +T V+ +E+ + +FS Sbjct: 299 EHHFREFLQLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNH------VSAEEIHKVVFS 352 Query: 271 MDSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNAS 450 M + K+PG DG+ F+K W+IIG E I A+Q FF+ G LPK +N ++ LIPK A Sbjct: 353 MPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAK 412 Query: 451 AVKDFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKS 630 +KD+RPI+CC VLYK+ISKI+ANRLK+VL I NQSAFVK RL+ +N++L+ E++K Sbjct: 413 EMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKD 472 Query: 631 YTRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNG 810 Y + +S RC +K+DI KA+DSV+W FL +L + FP F +WI C+TT S+ + VNG Sbjct: 473 YHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNG 532 Query: 811 DLTEAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFA 990 +L F + + +RQG +SPYLFVI M+ L++ L + R F YHPKC+ +GL HL FA Sbjct: 533 ELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFA 592 Query: 991 DDLLLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCE 1170 DDL++ + G + SI ++ VL +FA SGLK + KS +Y GV A + QEI++ Sbjct: 593 DDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDV 652 Query: 1171 GELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVY 1350 G+LP +YLG+PL SK+L+ C PLI+++ ++I W S+ LS+AGR+ L+ S L+ I + Sbjct: 653 GKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNF 712 Query: 1351 WSQIFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 W F LP+ ++ I C FLW+G S +A ++WE I Sbjct: 713 WMAAFRLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAI 753 >gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] Length = 872 Score = 394 bits (1011), Expect = e-107 Identities = 194/456 (42%), Positives = 291/456 (63%), Gaps = 2/456 (0%) Frame = +1 Query: 106 MEIREFYQSLMGTAAEELRMVDKNTMNRGPKLQVTQQ--KALVAAVTGKEVKEALFSMDS 279 +E +F++ + E+ V+ + + + T + L V+ +E+K LFSM Sbjct: 55 VEAEKFFKEFLQLIPEDFVGVEVRELQDLLQFRCTNSDNEMLTREVSSEEIKTVLFSMPK 114 Query: 280 SKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVK 459 K+PG DG+ F+K W IIG+E VQ FF G LPK +N ++ LIPK A ++ Sbjct: 115 DKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMR 174 Query: 460 DFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTR 639 D+RPI+CC VLYK+ISKI+ANRLK++L I++NQSAFVK RL+ +N++L+ EL+K Y + Sbjct: 175 DYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHK 234 Query: 640 KQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLT 819 +S RC +K+DI KA+DSV+W FL L+ + F FI+WI C+TT S+ + VNGDL Sbjct: 235 DSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLV 294 Query: 820 EAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDL 999 F++++G+RQG +SPYLFVICM+ L++ L + R F +HPKC+R+GL HL FADDL Sbjct: 295 GYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDL 354 Query: 1000 LLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGEL 1179 ++ + G SI+ +L V D+F SGL+ + KS +Y GV +KQEI G+L Sbjct: 355 MVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQL 414 Query: 1180 PFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQ 1359 P +YLG+PL +K+L+ PL++++ +RI W + S+AGR L+KSVL+ I +W Sbjct: 415 PVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLA 474 Query: 1360 IFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWE 1467 F LP++ ++ I C +FLW+G S +A I+W+ Sbjct: 475 AFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWD 510 >ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum lycopersicum] Length = 717 Score = 393 bits (1009), Expect = e-106 Identities = 188/335 (56%), Positives = 254/335 (75%), Gaps = 3/335 (0%) Frame = +1 Query: 478 CCTVLYKIIS---KILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQL 648 C T++ + I K + N V+ TIISD+Q+ F+ GR I DNIIL+HEL+K+YTRK + Sbjct: 324 CATIIEQEIIEALKSIGNDKAPVIHTIISDSQAGFIPGRKIGDNIILAHELVKAYTRKNV 383 Query: 649 SPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAF 828 SPRCM+K+D+ KAYDSVEWPFL+Q++ LGFP F W+M C+ TV+Y I VNG T+ F Sbjct: 384 SPRCMLKIDLHKAYDSVEWPFLEQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRF 443 Query: 829 EARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLF 1008 +A KG+RQGDP+SP+LF I MEYL+R L L +++ F YHPK ++ + HLCFADDLLLF Sbjct: 444 DAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLF 503 Query: 1009 TRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFK 1188 +RGD+NSI+ L +F+ ASGL+AN KS+IY GGV ++Q+I++ G ELPFK Sbjct: 504 SRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFK 563 Query: 1189 YLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFI 1368 YLGVPLSSKKL+ +Q PLI+K++ RIN W +K LSYAGR QL+K+VLFG+Q W+Q+FI Sbjct: 564 YLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFI 623 Query: 1369 LPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 +P KI+KLI+ CR++LW+G V+K+ALIAW+K+ Sbjct: 624 IPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKV 658 >emb|CAB72467.1| putative protein [Arabidopsis thaliana] Length = 762 Score = 390 bits (1003), Expect = e-106 Identities = 188/417 (45%), Positives = 278/417 (66%) Frame = +1 Query: 223 LVAAVTGKEVKEALFSMDSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKE 402 L V+ +E+K+ LFSM + K+PG DGF FFK W I+G E I A+Q FF++G LPK Sbjct: 2 LTRVVSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKG 61 Query: 403 VNVALITLIPKCDNASAVKDFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKG 582 VN ++ LIPK + +KD+RPI+CC V+YK+ISKILANRLK++L I+ NQS+FVK Sbjct: 62 VNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKD 121 Query: 583 RLIFDNIILSHELIKSYTRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINW 762 RL+ +N++L+ +L+K Y + +S RC +K+DI KA DSV+W FL L + FP FI+W Sbjct: 122 RLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHW 181 Query: 763 IMTCLTTVSYVINVNGDLTEAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFH 942 I C+TT S+ + VNG+L F++ +G+RQG +SPYLFVICM+ L++ L ++ Sbjct: 182 IRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIG 241 Query: 943 YHPKCKRVGLIHLCFADDLLLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGV 1122 YHP CKR+GL HL FADDL++ T G SI+ ++ V D F+ SGLK + KS I+ G+ Sbjct: 242 YHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGL 301 Query: 1123 GAHLKQEILELSGMCEGELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYA 1302 + + ++ GELP +YLG+PL +K+LS V PLI+++ +RI W+S+ LS+A Sbjct: 302 SSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFA 361 Query: 1303 GRVQLMKSVLFGIQVYWSQIFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 GR L+ S+++ +W F LP+ ++ I+ C +FLW+G SK+A I+W ++ Sbjct: 362 GRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQV 418 >gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] Length = 740 Score = 389 bits (998), Expect = e-105 Identities = 183/426 (42%), Positives = 272/426 (63%) Frame = +1 Query: 196 KLQVTQQKALVAAVTGKEVKEALFSMDSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQF 375 + T Q L VT +E ++ LF+M S+K PG DG+ FFK W I G++ I A++ F Sbjct: 13 RCSATDQDMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSF 72 Query: 376 FSVGDLPKEVNVALITLIPKCDNASAVKDFRPIACCTVLYKIISKILANRLKVVLDTIIS 555 F G LPK +N ++ LIPK D A+ ++D+RPI+CC V+YK+ISKI+ANRLKV+L T I Sbjct: 73 FIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFIL 132 Query: 556 DNQSAFVKGRLIFDNIILSHELIKSYTRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIEL 735 NQSAFV+ RL+ +N++L+ EL+K Y + +SPRC +K+DI KA+DSV+W FL L L Sbjct: 133 QNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEAL 192 Query: 736 GFPHRFINWIMTCLTTVSYVINVNGDLTEAFEARKGIRQGDPISPYLFVICMEYLNRCLL 915 FP F +WI C++T ++ + VNG+L F +++G+RQG +SPYLFVICM L+ + Sbjct: 193 NFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMID 252 Query: 916 ELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTRGDINSIQQLLSVLDKFAAASGLKANQL 1095 +R YHPKCK++ L HLCFADDL++F G S++ ++++ +FA SGL + Sbjct: 253 VAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLE 312 Query: 1096 KSNIYFGGVGAHLKQEILELSGMCEGELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINC 1275 KS +Y GV + IL G+LP +YLG+PL +K+++ PL+ K+ +I+ Sbjct: 313 KSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISS 372 Query: 1276 WASKLLSYAGRVQLMKSVLFGIQVYWSQIFILPQKILKLIQSACRTFLWTGRTEVSKRAL 1455 W ++ LSYAGR+ L+ SV+ + +W + LP +K I+ C FLW+G K+A Sbjct: 373 WTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAK 432 Query: 1456 IAWEKI 1473 I W + Sbjct: 433 ITWTSL 438 >ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca subsp. vesca] Length = 958 Score = 379 bits (972), Expect = e-102 Identities = 192/438 (43%), Positives = 272/438 (62%), Gaps = 4/438 (0%) Frame = +1 Query: 178 TMNR--GPKLQVTQQKALVAAVTGKEVKEALFSMDSSKAPGIDGFNVYFFKRCWHIIGEE 351 T+NR GP L K+L T +++ FSM+ +K+PG DGFN FF++ W +IG+ Sbjct: 256 TINRSDGPDLA----KSLCNEFTHDDIRAVFFSMNPNKSPGPDGFNGCFFQKAWLVIGDN 311 Query: 352 VIHA-VQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRPIACCTVLYKIISKILANRL 528 V+ A V++FFS G L E+N +ITL+PK N + + DFRPI+CC YKII+K+LANRL Sbjct: 312 VVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPISCCNTFYKIIAKLLANRL 371 Query: 529 KVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLSPRCMVKVDIQKAYDSVEWP 708 K L I+ +QS F+ GR I DNI+L+ E+I Y + PRC VD+ KA D+VEW Sbjct: 372 KGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWD 431 Query: 709 FLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFEARKGIRQGDPISPYLFVIC 888 F+ L P I WI +C+++ + + VNG+L F R+G+RQGDP+SPYLFVI Sbjct: 432 FIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIA 491 Query: 889 MEYLNRCL-LELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTRGDINSIQQLLSVLDKFA 1065 ME L+ C+ + + F YH +C ++ L HLCFADDLL+F GD NS++ L F Sbjct: 492 MEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFE 551 Query: 1066 AASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFKYLGVPLSSKKLSVVQCQPL 1245 + S LKAN +S I+ GV + +L+++ G P +YLG+PL + KL + C PL Sbjct: 552 SLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPL 611 Query: 1246 IKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFILPQKILKLIQSACRTFLWT 1425 + ++ RI W +K+LS+AGR+QL++SVL IQVYW+ ILP+K+LK I+ R FLW Sbjct: 612 LDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWA 671 Query: 1426 GRTEVSKRALIAWEKIML 1479 G +AW +I L Sbjct: 672 GNCSGRAATKVAWSEICL 689 >gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana] gi|20197043|gb|AAM14892.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 1412 Score = 377 bits (967), Expect = e-102 Identities = 179/421 (42%), Positives = 269/421 (63%) Frame = +1 Query: 211 QQKALVAAVTGKEVKEALFSMDSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGD 390 +Q LVA +T EV + FS+ +K+PG DG+ V FF+ W +IG+EV A++ FF+ G Sbjct: 711 EQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGF 770 Query: 391 LPKEVNVALITLIPKCDNASAVKDFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSA 570 LPK +N ++ LIPK A +KD+RPI+CC VLYK ISK+LANRLK +L I+ NQSA Sbjct: 771 LPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSA 830 Query: 571 FVKGRLIFDNIILSHELIKSYTRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHR 750 F+ RL+ +N++L+ EL+K Y + LSPRC +K+D+ KA+DSV+WPFL L L P + Sbjct: 831 FISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEK 890 Query: 751 FINWIMTCLTTVSYVINVNGDLTEAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDN 930 FI+WI C++T S+ + VN G+RQG +SPYLFVICM L+ L + Sbjct: 891 FIHWINLCISTASFSVQVN-----------GLRQGCSLSPYLFVICMNVLSAMLDKGAVE 939 Query: 931 RLFHYHPKCKRVGLIHLCFADDLLLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIY 1110 + F YHP+C+ +GL HLCFADD+++F+ G +S++ +L++ FAA SGL + KS ++ Sbjct: 940 KRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLF 999 Query: 1111 FGGVGAHLKQEILELSGMCEGELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKL 1290 + + IL G LP +YLG+PL +K++++ C PL++K+ RI+ W ++ Sbjct: 1000 MASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRF 1059 Query: 1291 LSYAGRVQLMKSVLFGIQVYWSQIFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWEK 1470 LSYAGR+QL+ SV+ + +W F LP+ ++ I+ FLW+G +A +AW Sbjct: 1060 LSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHD 1119 Query: 1471 I 1473 + Sbjct: 1120 V 1120 >gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1352 Score = 369 bits (948), Expect = 1e-99 Identities = 175/400 (43%), Positives = 264/400 (66%) Frame = +1 Query: 274 DSSKAPGIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASA 453 ++ K+PG DG+ V FFK W ++G +++ A+Q FF G LPK +N ++ LI K S Sbjct: 613 EAHKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSG 672 Query: 454 VKDFRPIACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSY 633 +KD+RPI+CC VLYKI+SK++ANRLK +L I+ NQSAF+K RL+ +N++L+ EL+K Y Sbjct: 673 MKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDY 732 Query: 634 TRKQLSPRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGD 813 ++ +S R +K+DI KA+D V+WPFL +L + P FI+WI C+ T S+ + VNG+ Sbjct: 733 HKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGE 792 Query: 814 LTEAFEARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFAD 993 L+ F + +G+RQG +SPYL+VICM L+ L + + YHP+C+ + L HLCFAD Sbjct: 793 LSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFAD 852 Query: 994 DLLLFTRGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEG 1173 D+++F+ G SIQ L++ +KFAA S LK + KS I+ G+ + K IL+ G Sbjct: 853 DIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELG 912 Query: 1174 ELPFKYLGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYW 1353 LP KYLG+PL +K+++ PL++K+ RI W ++ LS+AGR+QL+KSVL I +W Sbjct: 913 TLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFW 972 Query: 1354 SQIFILPQKILKLIQSACRTFLWTGRTEVSKRALIAWEKI 1473 +F LP+ L+ I+ FLW+G +K+A IAW ++ Sbjct: 973 LSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEV 1012 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 364 bits (935), Expect = 5e-98 Identities = 184/451 (40%), Positives = 276/451 (61%), Gaps = 3/451 (0%) Frame = +1 Query: 121 FYQSLMGTAAEELRMVDKNTMNRGPKLQVTQQKA--LVAAVTGKEVKEALFSMDSSKAPG 294 +Y+ L+G+ M ++ MN + +Q + L + T E+K A S+ +K G Sbjct: 268 YYERLLGSIESPFSM-EQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSG 326 Query: 295 IDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRPI 474 DG++V FF+ W IIG EV+ A+ +FF G L K+ N + LIPK NA + +FRPI Sbjct: 327 PDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPI 386 Query: 475 ACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLSP 654 +C LYK+ISK+L +RL+ +L +I +QSAF+ GR + +N++L+ E++ Y R +SP Sbjct: 387 SCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISP 446 Query: 655 RCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFEA 834 R M+KVD++KA+DSV+W F+ L L P R+INWI C+TT S+ I+VNG F + Sbjct: 447 RGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRS 506 Query: 835 RKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTR 1014 KG+RQGDP+SPYLFV+ ME ++ L D+ HYHPK + + HL FADD+++F Sbjct: 507 TKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFD 566 Query: 1015 GDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELS-GMCEGELPFKY 1191 G +S+ + LD FA SGLK N+ KS ++ G+ L + I + G G P +Y Sbjct: 567 GGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRY 624 Query: 1192 LGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFIL 1371 LG+PL +KL + PL++K+ R+ W SK LS+AGR QL+ SV+FG+ +W F+L Sbjct: 625 LGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLL 684 Query: 1372 PQKILKLIQSACRTFLWTGRTEVSKRALIAW 1464 P+ +K I+S C FLW G + K + ++W Sbjct: 685 PKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 364 bits (935), Expect = 5e-98 Identities = 184/451 (40%), Positives = 276/451 (61%), Gaps = 3/451 (0%) Frame = +1 Query: 121 FYQSLMGTAAEELRMVDKNTMNRGPKLQVTQQKA--LVAAVTGKEVKEALFSMDSSKAPG 294 +Y+ L+G+ M ++ MN + +Q + L + T E+K A S+ +K G Sbjct: 268 YYERLLGSIESPFSM-EQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSG 326 Query: 295 IDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRPI 474 DG++V FF+ W IIG EV+ A+ +FF G L K+ N + LIPK NA + +FRPI Sbjct: 327 PDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPI 386 Query: 475 ACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLSP 654 +C LYK+ISK+L +RL+ +L +I +QSAF+ GR + +N++L+ E++ Y R +SP Sbjct: 387 SCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISP 446 Query: 655 RCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFEA 834 R M+KVD++KA+DSV+W F+ L L P R+INWI C+TT S+ I+VNG F + Sbjct: 447 RGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRS 506 Query: 835 RKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTR 1014 KG+RQGDP+SPYLFV+ ME ++ L D+ HYHPK + + HL FADD+++F Sbjct: 507 TKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFD 566 Query: 1015 GDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELS-GMCEGELPFKY 1191 G +S+ + LD FA SGLK N+ KS ++ G+ L + I + G G P +Y Sbjct: 567 GGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL--DLSERITSAAYGFPAGTFPIRY 624 Query: 1192 LGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFIL 1371 LG+PL +KL + PL++K+ R+ W SK LS+AGR QL+ SV+FG+ +W F+L Sbjct: 625 LGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLL 684 Query: 1372 PQKILKLIQSACRTFLWTGRTEVSKRALIAW 1464 P+ +K I+S C FLW G + K + ++W Sbjct: 685 PKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 361 bits (927), Expect = 4e-97 Identities = 181/455 (39%), Positives = 280/455 (61%), Gaps = 2/455 (0%) Frame = +1 Query: 121 FYQSLMGTAAEELRMVDKNTMNR--GPKLQVTQQKALVAAVTGKEVKEALFSMDSSKAPG 294 ++ SL+G + M ++N MN + Q L + + ++++ ALFS+ +K+ G Sbjct: 408 YFGSLLGDEVDPYLM-EQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCG 466 Query: 295 IDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRPI 474 DGF FF W I+G EV A+++FFS G L K+ N I LIPK N + DFRPI Sbjct: 467 PDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPI 526 Query: 475 ACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLSP 654 +C LYK+I+++L +RL+ +L +IS QSAF+ GR + +N++L+ +L+ Y +SP Sbjct: 527 SCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISP 586 Query: 655 RCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFEA 834 R M+KVD++KA+DSV W F+ L L P +FINWI C++T ++ +++NG F++ Sbjct: 587 RGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKS 646 Query: 835 RKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTR 1014 KG+RQGDP+SPYLFV+ ME + L ++ L HYHPK + + HL FADD+++F Sbjct: 647 TKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFD 706 Query: 1015 GDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFKYL 1194 G S+ + LD FA+ SGLK N+ KS++Y G+ L+ G G LP +YL Sbjct: 707 GGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLN-QLESNANAAYGFPIGTLPIRYL 765 Query: 1195 GVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFILP 1374 G+PL ++KL + + +PL++K+ R W +K LS+AGR+QL+ SV+FG +W F+LP Sbjct: 766 GLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLP 825 Query: 1375 QKILKLIQSACRTFLWTGRTEVSKRALIAWEKIML 1479 + +K I+S C FLW+G E +K ++W + L Sbjct: 826 KGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCL 860 >gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13) [Arabidopsis thaliana] Length = 1164 Score = 359 bits (921), Expect = 2e-96 Identities = 185/456 (40%), Positives = 281/456 (61%), Gaps = 2/456 (0%) Frame = +1 Query: 118 EFYQSLMGTAAEELRMVDKNTMNR--GPKLQVTQQKALVAAVTGKEVKEALFSMDSSKAP 291 E++QS +G+ + L + ++ ++ + QQ +L + +++K A FS+ +KA Sbjct: 304 EYFQSNLGSE-QGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKAS 362 Query: 292 GIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRP 471 G DGF+ FF CW IIG EV A+ +FF+ G L K+ N + LIPK NAS++ DFRP Sbjct: 363 GPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRP 422 Query: 472 IACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLS 651 I+C +YK+ISK+L +RLK L IS +QSAF+ GRL +N++L+ EL+ Y +K ++ Sbjct: 423 ISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIA 482 Query: 652 PRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFE 831 P M+KVD++KA+DSV W F+ L L P +F WI+ CL+T S+ + +NG F Sbjct: 483 PSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFW 542 Query: 832 ARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFT 1011 + KG+RQGDP+SPYLFV+ ME + L + YHPK ++ + HL FADD+++F Sbjct: 543 SSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFF 602 Query: 1012 RGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFKY 1191 G +S+ ++ L+ FA SGL N K+ +Y G+ + + + + G G LP +Y Sbjct: 603 DGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGL-SQSESDSMASYGFKLGSLPVRY 661 Query: 1192 LGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFIL 1371 LG+PL S+KL++ + PLI+K+ R N W +LLS+AGRVQL+ SV+ GI +W FIL Sbjct: 662 LGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFIL 721 Query: 1372 PQKILKLIQSACRTFLWTGRTEVSKRALIAWEKIML 1479 P +K I+S C FLW+ R + A +AW ++ L Sbjct: 722 PLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCL 757 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 349 bits (895), Expect = 2e-93 Identities = 182/456 (39%), Positives = 277/456 (60%), Gaps = 2/456 (0%) Frame = +1 Query: 118 EFYQSLMGTAAEELRMVDKNTMNRGPKLQVTQ--QKALVAAVTGKEVKEALFSMDSSKAP 291 +F++ L G+++ + + +N + + + ++ L A V+ ++K F++ S+K+P Sbjct: 405 DFFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSP 464 Query: 292 GIDGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRP 471 G DG+ FFK+ W I+G +I AVQ+FF G L + N +T++PK NA + +FRP Sbjct: 465 GPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRP 524 Query: 472 IACCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLS 651 I+CC +YK+ISK+LA RL+ +L IS +QSAFVKGRL+ +N++L+ EL++ + + +S Sbjct: 525 ISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANIS 584 Query: 652 PRCMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFE 831 R ++KVD++KA+DSV W F+ + L P RF+NWI C+T+ S+ INV+G L F+ Sbjct: 585 SRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFK 644 Query: 832 ARKGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFT 1011 KG+RQGDP+SP LFVI ME L+R L + YHPK V + L FADDL++F Sbjct: 645 GSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFY 704 Query: 1012 RGDINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELSGMCEGELPFKY 1191 G +S++ + SVL+ F SGL+ N KS +Y G+ K++ L G G PF+Y Sbjct: 705 DGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLAF-GFVNGTFPFRY 763 Query: 1192 LGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFIL 1371 LG+PL +KL LI K+ R N WA+K LS+AGR+QL+ SV++ +W FIL Sbjct: 764 LGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFIL 823 Query: 1372 PQKILKLIQSACRTFLWTGRTEVSKRALIAWEKIML 1479 P+ LK I+ C FLW ++W+ L Sbjct: 824 PKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCL 859 >dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 347 bits (889), Expect = 1e-92 Identities = 183/456 (40%), Positives = 274/456 (60%), Gaps = 3/456 (0%) Frame = +1 Query: 121 FYQSLM-GTAAEELRMVDKNTMNRGPKLQVTQQKALVAAVTGKEVKEALFSMDSSKAPGI 297 F++SL+ G E + + V Q L + + +++EA FS+ +KA G Sbjct: 409 FFESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGP 468 Query: 298 DGFNVYFFKRCWHIIGEEVIHAVQQFFSVGDLPKEVNVALITLIPKCDNASAVKDFRPIA 477 DG++ FFK W ++G EV AVQ+FF G L K+ N + LIPK N+S + DFRPI+ Sbjct: 469 DGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPIS 528 Query: 478 CCTVLYKIISKILANRLKVVLDTIISDNQSAFVKGRLIFDNIILSHELIKSYTRKQLSPR 657 C LYK+I+K+L +RLK +L+ +IS +QSAF+ GRL+ +N++L+ E++ Y K +S R Sbjct: 529 CLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSR 588 Query: 658 CMVKVDIQKAYDSVEWPFLKQMLIELGFPHRFINWIMTCLTTVSYVINVNGDLTEAFEAR 837 M+KVD++KA+DSV W F+ L P +F+ WI C++T + + VNG + F++ Sbjct: 589 GMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSN 648 Query: 838 KGIRQGDPISPYLFVICMEYLNRCLLELTDNRLFHYHPKCKRVGLIHLCFADDLLLFTRG 1017 KG+RQGDP+SPYLFV+ ME + L D HYHPK + + HL FADD+++F G Sbjct: 649 KGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDG 708 Query: 1018 DINSIQQLLSVLDKFAAASGLKANQLKSNIYFGGVGAHLKQEILELS--GMCEGELPFKY 1191 +S+ + LD FA+ SGL N+ K+N+Y G + E L +S G LP +Y Sbjct: 709 GSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTD---EVEALAISHYGFPISTLPIRY 765 Query: 1192 LGVPLSSKKLSVVQCQPLIKKMLQRINCWASKLLSYAGRVQLMKSVLFGIQVYWSQIFIL 1371 LG+PL S+KL + + + +++R WA K LS+AGRVQL+ SV+ G+ +W F+L Sbjct: 766 LGLPLMSRKLKISEYE-----LVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWMSTFVL 820 Query: 1372 PQKILKLIQSACRTFLWTGRTEVSKRALIAWEKIML 1479 +K I+S C FLW+G + SK A IAW + L Sbjct: 821 LLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCL 856