BLASTX nr result

ID: Mentha26_contig00038874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00038874
         (409 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. ru...    74   2e-11
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]    56   5e-06

>dbj|BAK64102.1| gag-pol polyprotein [Eustoma exaltatum subsp. russellianum]
          Length = 1591

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/56 (64%), Positives = 41/56 (73%)
 Frame = -1

Query: 169 CLLFLDIRTKRIIGRGTEERGLYYVDGRIQHGSAMLTQGSSKEEATLWHRRLGHPS 2
           CLL  DIRT+ IIGRGTE  GLYYVD  +QHGS+ L  G+   +  LWHRRLGHPS
Sbjct: 573 CLL-QDIRTQAIIGRGTENGGLYYVDAVVQHGSSNLATGTVTRQIWLWHRRLGHPS 627


>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
          Length = 1409

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -1

Query: 184 SSANGCLLFLDIRTKRIIGRGTEERGLYYVDGRIQHGSA--MLTQGSSKEEATLWHRRLG 11
           ++ANG + + DI TK IIGRGT+  GLYY+D    +G A  M + G  + +  LWH RLG
Sbjct: 410 ANANG-VTYPDILTKEIIGRGTKREGLYYMDD-FSYGRANNMHSAGVKERQIWLWHNRLG 467

Query: 10  HPS 2
           HPS
Sbjct: 468 HPS 470


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